BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G45100.1
Length=1820
Score E
Sequences producing significant alignments: (Bits) Value
Ahg918622 jgi|Araly1|918622|Al_scaffold_0357_1 1711 0.0
Ahg346315 jgi|Araly1|346315|fgenesh1_pg.C_scaffold_4002657 926 0.0
Ahg341076 jgi|Araly1|341076|fgenesh1_pg.C_scaffold_3000839 918 0.0
Ahg317739 jgi|Araly1|317739|fgenesh1_pm.C_scaffold_3000755 918 0.0
Ahg316772 jgi|Araly1|316772|fgenesh1_pm.C_scaffold_2001805 846 0.0
Ahg346626 jgi|Araly1|346626|fgenesh1_pg.C_scaffold_5000018 797 0.0
> Ahg918622 jgi|Araly1|918622|Al_scaffold_0357_1
Length=1263
Score = 1711 bits (926), Expect = 0.0
Identities = 1079/1150 (94%), Gaps = 21/1150 (2%)
Strand=Plus/Plus
Query 147 ATGGTGTGGTGTAAACATTGTGGGAAGAACGTTCCCGGAATACGCCCCTATGATGCTGCA 206
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1 ATGGTGTGGTGTAACCATTGTGGGAAGAACGTTCCCGGAATACGCCCCTATGATGGTGCA 60
Query 207 TTGTCATGTGATTTATGTGGCAGGATTTTGGAGAATTTCAATTTTTCTACTGAAGTTACA 266
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 61 TTGTCATGTGATTTATGTGGCAGGATTTTGGAGAATTTCAATTTTTCTACTCAAGTTACT 120
Query 267 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCTTCTGGTAACATACTCAAGAGTGTTCAG 326
|||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 121 TTCGTTAAGAATGCAGCTGGACAGAGCCAAGCTTCTGGTAACATAGTGAAGAGTGTTCAG 180
Query 327 AGTGGCATGTCAAGCTCACGTGAAAGGATAATCAGAAAAGCTACT-GATGAGCTTATGAA 385
||||| |||||||||||||||||||||| |||||||| ||||| | ||||||||||||||
Sbjct 181 AGTGGGATGTCAAGCTCACGTGAAAGGAGAATCAGAATAGCTA-TAGATGAGCTTATGAA 239
Query 386 TTTGAGAGATGCTTTGGGAATTGGTGATGACAGAGATGATGTTATTGTCATGGCTTCTAA 445
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TTTGAGAGACGCTTTGGGAATTGGTGATGACAGAGATGATGTTATTGTCATGGCTTCTAA 299
Query 446 TTTCTTTAGAATTGCACTTGATCATAATTTCACTAAAGGCCGTAGCAA-AGAACTAGTAT 504
||||||||||| |||||||||| ||||||||||||||||||||| || || ||||||
Sbjct 300 TTTCTTTAGAACGGCACTTGATCTTAATTTCACTAAAGGCCGTAG-AAGCGAGCTAGTAC 358
Query 505 TCTCTTCATGTCTCTACTTGACTTGCAGGCAATTCAAATTGGCGGTTCTTCTTATTGATT 564
| |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| |||
Sbjct 359 TGTCTTCATGTCTCTACTTGTCTTGCAGGCAATTAAAATTTGCGGTTCTTCTTATTCATT 418
Query 565 TTTCAAGCTACCTTCGTGTTAGCGTTTACGATTTAGGTTCTGTGTATTTGCAACTCTGTG 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 TTTCAAGCTACCTTCGTGTTAGCGTTTACGATTTAGGTTCTGTGTATTTGCAACTCTGTG 478
Query 625 ACATGCTCTACATTACAGAAAACCACAACTATGAGAAACTTGTTGATCCTTCAATTTTCA 684
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 479 ACATGCTCTACATTACAGAAAACCACAACTACGAGAAACTTGTTGATCCTTCAATTTTCA 538
Query 685 TTCCTCGATTCTCAAACATGTTATTGAAAGGTGCACACAATAATAAACTCGTG----C-- 738
||||| ||||| |||||||||||||||||||||||||| ||| ||| ||||| |
Sbjct 539 TTCCTGGATTCACAAACATGTTATTGAAAGGTGCACACCGTAAGAAAGTCGTGGGAACAG 598
Query 739 T-----A-ACGGCTACACACATTATAGCTAGTATGAAGAGAGATTGGATGCAGACCGGAC 792
| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 TCGTGGACACGGCTACAGACATTATAGCTAGTATGAAGAGAGATTGGATGCAGACCGGAC 658
Query 793 GGAAACCAAGTGGAATATGTGGAGCAGCACTCTATACAGCTGCACTTTCTCATGGTATCA 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 GGAAACCAAGTGGAATATGTGGAGCAGCACTCTATACAGCTGCACTTTCTCATGGTATCA 718
Query 853 AGTGCTCCAAGACAGATATCGTGAACATTGTGCATATATGCGAAGCAACCCTAACTAAAA 912
||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 719 AGTGCTCTAAGACAGATATCGTGAAAATTGTGCATATATGCGAAGCAACTCTAACTAAAA 778
Query 913 GATTGATTGAGTTTGGAGATACCGAGGCTGCAAGTTTGACTGCAGATGAGCTCAGTAAAA 972
||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 779 GATTGATTGAGTTTGGAAATACCGAGGCTGCAAGTTTTACTGCTGATGAGCTCAGTAAAA 838
Query 973 CTGAAAGAGAAA-AAGAAACGG--CTGCATTGCGAAGTAAAAGGAAGCCAAATTT-TTAC 1028
|||||||||||| || ||| | | | |||||| ||||||||||| |||| ||| ||||
Sbjct 839 CTGAAAGAGAAAGAAAAAAAGAAACGGAATTGCGTAGTAAAAGGAATCCAA-TTTCTTAC 897
Query 1029 AAAGAAGGAGTAGTGCTCTGTATGCATCAAGATTGTAAACCTGTTGATTATGGATTATGT 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 AAAGAAGGAGTAGTGCTCTGTATGCATCAAGATTGTAAACCTGTTGATTATGGATTATGT 957
Query 1089 GAGAGCTGTTACGATGAATTCATGACAGTTTCTGGTGGACTTGAAGGTGGGTCGGATCCT 1148
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 958 AAGAGCTGTTACGATGAGTTCATGAAAGTTTCTGGTGGACTTGAAGGTGGGTCGGATCCT 1017
Query 1149 CCCGCCTTCCAGCGAGCAGAGAAAGAGAGAATGGAGGAAAAAGCTTCTAGTGAAGAAAAC 1208
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1018 CCCGCCTTCCAGCGAGCAGAGAAAGAGAGAATGGAGGAAAAAGCTTCTAGAGAAGAAAAC 1077
Query 1209 GACAAACAAGTAAATTTGGATGGACATTCGGATGAATCAAGCACCTTGTCTGACGTCGAT 1268
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1078 GACAAACAACTAAATTCGGATGGACATTCGGATGAATCAAGCACCTTGTCTGACGTTGAT 1137
Query 1269 GATAGAGAGT 1278
||||||||||
Sbjct 1138 GATAGAGAGT 1147
> Ahg346315 jgi|Araly1|346315|fgenesh1_pg.C_scaffold_4002657
Length=1428
Score = 926 bits (501), Expect = 0.0
Identities = 695/781 (89%), Gaps = 43/781 (6%)
Strand=Plus/Plus
Query 873 GTGAACATTGTGCATATATGCGAAGCAACCCTAACTAAAAGATTGATTGAGTTTGGAGAT 932
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 517 GTGAAAATTGTGCATATATGCGAAGCAACTCTAACTAAAAGATTGATTGAGTTTGGAAAT 576
Query 933 ACCGAGGCTGCAAGTTTGACTGCAGATGAGCTCAGTAAAACTGAAAGAGAAA-AAGAAAC 991
||||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||
Sbjct 577 ACCGAGGCTGCAAGTTTTACTGCTGATGAGCTCAGTAAAACTGAAAGAGAAAGAAAAAAA 636
Query 992 G--GCTGCATTGCGAAGTAAAAGGAAGCCAAATTT-TTACAAAGAAGGAGTAGTGCTCTG 1048
| | | |||||| ||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 637 GAAACGGAATTGCGTAGTAAAAGGAATCC-AATTTCTTACAAAGAAGGAGTAGTGCTCTG 695
Query 1049 TATGCATCAAGATTGTAAACCTGTTGATTATGGATTATGTGAGAGCTGTTACGATGAATT 1108
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 696 TATGCATCAAGATTGTAAACCTGTTGATTATGGATTATGTAAGAGCTGTTACGATGAGTT 755
Query 1109 CATGACAGTTTCTGGTGGACTTGAAGGTGGGTCGGATCCTCCCGCCTTCCAGCGAGCAGA 1168
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 756 CATGAAAGTTTCTGGTGGACTTGAAGGTGGGTCGGATCCTCCCGCCTTCCAGCGAGCAGA 815
Query 1169 GAAAGAGAGAATGGAGGAAAAAGCTTCTAGTGAAGAAAACGACAAACAAGTAAATTTGGA 1228
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||
Sbjct 816 GAAAGAGAGAATGGAGGAAAAAGCTTCTAGAGAAGAAAACGACAAACAACTAAATTCGGA 875
Query 1229 TGGACATTCGGATGAATCAAGCACCTTGTCTGACGTCGATGATAGAGAGT-TG---G--- 1281
|||||||||||||||||||||||||||||||||||| ||||||||||||| || |
Sbjct 876 TGGACATTCGGATGAATCAAGCACCTTGTCTGACGTTGATGATAGAGAGTCTGATCGTTT 935
Query 1282 -A-T-T------GTT--ATT-TT-----CGGA-CGCCAGAAGAAGTGCGCCTGGTTAAGA 1323
| | | ||| ||| || |||| | |||||||||||||||| |||| |||
Sbjct 936 CACTGTTTCCCAGTTGGATTGTTATTTTCGGAAC-CCAGAAGAAGTGCGCCAGGTTGAGA 994
Query 1324 TCTTCTTTGATC-A-CGAAAACCCCGGATATGATGAGAAGGAAGCAGCTAAGAAAGCAGC 1381
|| ||||||||| | | ||| ||||| |||| |||||||||||||||||||| |||||||
Sbjct 995 TCGTCTTTGATCTAAC-AAA-CCCCGAATATAATGAGAAGGAAGCAGCTAAGGAAGCAGC 1052
Query 1382 AGGTTTAAATGCTTGCAATAATGCAAGCAACATTTTCGAAGCTTCTAAAGCAGCTGCGGC 1441
|| |||||| || ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1053 AGCTTTAAACGCGAGCAATAATGCAAGCAACCTTTTCGAAGCTTCTAAAGCAGCTGCGGC 1112
Query 1442 GAAATCTAGAAAAGAAAAACGACAACAACGCGCTGAGGAAGAAAAGAACGCTCCTCCTCC 1501
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1113 GAAATCTAGAAAAGAAAAACGACAACAACGTGCTGAGGAAGAAAAGAACGCGCCTCCTCC 1172
Query 1502 AGCTACAGGCATAGAAGCTGTTGATAGCATGGTCAAGAGAAAGAAATTTCGCG-ATATTA 1560
||||||| ||| |||||||||| ||| ||||||||||||||||||||||||| | |||
Sbjct 1173 TGCTACAGCCATGGAAGCTGTTGGTAGAATGGTCAAGAGAAAGAAATTTCGCGGA-ATTC 1231
Query 1561 ACTGCGATTATTTGGAGGAGCTTTTTGATGCGTCAGTTGAGAAATCACCCAAGAGATCGA 1620
||||||| |||||||| ||| ||| | |||| |||||||||||||||||||||||
Sbjct 1232 ACTGCGAATATTTGGAT---CTT---GATACTTCAGCTGAGAAATCACCCAAGAGATCGA 1285
Query 1621 A 1621
|
Sbjct 1286 A 1286
Score = 793 bits (429), Expect = 0.0
Identities = 448/457 (98%), Gaps = 2/457 (0%)
Strand=Plus/Plus
Query 1359 AAGGAAGCAGCTAAGAAAGCAGCAGGTTTAAATGCTTGCAATAATGCAAGCAACATTTTC 1418
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 31 AAGGAAGCAGCTAAGAAAGCAGCAGGTTTAAACGCTTGCAATAATGCAAGCAACATTTTC 90
Query 1419 GAAGCTTCTAAAGCAGCTGCGGCGAAATCTAGAAAAGAAAAACGACAACAACGCGCTGAG 1478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 91 GAAGCTTCTAAAGCAGCTGCGGCGAAATCTAGAAAAGAAAAACGACAACAACGCGCTGAG 150
Query 1479 GAAGAAAAGAACGCTCCTCCTCCAGCTACAGGCATAGAAGCTGTTGATAGCATGGTCAAG 1538
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 151 GAAGAAAAGAACGCTCCTCCTCCAGCTACAGCCATAGAAGCTGTTGATAGCATGGTCAAG 210
Query 1539 AGAAAGAAATTTCGC-GATATTAACTGCGATTATTTGGAGGAGCTTTTTGATGCGTCAGT 1597
||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||
Sbjct 211 AGAAAGAAATTTCGCAGA-ATTAACTGCGATTATTTGGAGGAGCTTCTTGATGCGTCAGC 269
Query 1598 TGAGAAATCACCCAAGAGATCGAAAACCGAGACAGTGATGgagaagaagaagaaggaaga 1657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 270 TGAGAAATCACCCAAGAGATCGAAAACCGAGACAGTGATGGAGAAGAAGAAGAAGGAAGA 329
Query 1658 gcatgagattgttgaaaacgaacaagaggaagaagaCTACGCGGCACCATACGAACAAGA 1717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 330 GCATGAGATTGTTGAAAACGAACAAGAGGAAGAAGACTACGCGGCACCATACGAACAAGA 389
Query 1718 TGAAGAAGACTACGCGGCACCATACGAGATGAACACAGATAAGAAATTCTATGAAAGCGA 1777
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 390 TGAAGAAGACTACGCGGCACCATACGAGATGAACACAGATGAGAAATTCTATGAAAGCGA 449
Query 1778 AGTAGAAGAGGAAGAGGATGGTTACGATTTTGGATTG 1814
||| ||||||||||||||||||||||| |||||||||
Sbjct 450 AGTGGAAGAGGAAGAGGATGGTTACGAGTTTGGATTG 486
Score = 187 bits (101), Expect = 2e-46
Identities = 109/113 (96%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 1708 ACGAACAAGATGAAGAAGACTACGCGGCACCATACGAGATGAACACAGATAAGAAATTCT 1767
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1316 ACGAACAAGATGAAGAAGACTACGCGGTACCATACGAGATGAACACAGATGAGAAATTCT 1375
Query 1768 ATGAAAGCGAAGTAGAAGAGGAAGAGGATGGTTACGATTTTGGATTGTATTAA 1820
||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1376 ATGAAGGCGAAGTGGAAGAGGAAGAGGATGGTTACGATTTTGGATTGTATTAA 1428
> Ahg341076 jgi|Araly1|341076|fgenesh1_pg.C_scaffold_3000839
Length=3738
Score = 918 bits (497), Expect = 0.0
Identities = 896/1082 (83%), Gaps = 54/1082 (5%)
Strand=Plus/Plus
Query 147 ATGGTGTGGTGTAAACATTGTGGGAAGAACGTTCCCGGAATACGCCCCTATGATGCTGCA 206
|||||||||||||| || || | |||||| ||||||||||||||||| ||||||| ||||
Sbjct 1 ATGGTGTGGTGTAACCACTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 60
Query 207 TTGTCATGTGATTTATGTGGCAGGATTTTGGAGAATTTCAATTTTTCTACTGAAGTTACA 266
||| ||||| |||||||||| ||||| |||||||| |||||||||||||| |||||||||
Sbjct 61 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAACTTCAATTTTTCTACAGAAGTTACA 120
Query 267 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCTTCTGGTAACATACTCAAG-AGTGTTCA 325
|||||||||||||||||||||||||||||||| || ||||||||| | | | ||||||||
Sbjct 121 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCCTCAGGTAACATAGTGA-GCAGTGTTCA 179
Query 326 GAGTGGCATGTC-AAGCTCACGTGAAAGGATA-ATCAGAAAAGCTACTGATGAGCTTATG 383
||||| || || ||||||||||||||||| | || |||| ||||| |||||| ||| |
Sbjct 180 AAGTGGGAT-TCCAAGCTCACGTGAAAGGAGATAT-AGAATAGCTAGAGATGAGTTTACG 237
Query 384 AATTTGAGAGATGCTTTGGGAATTGGTGATGACAGAGATGATGTTATTGTCATGGCT-T- 441
|||||||||||||| ||||||||||||||||| |||| |||||| |||| ||||||| |
Sbjct 238 AATTTGAGAGATGCATTGGGAATTGGTGATGAGAGAGCTGATGTGATTGACATGGCTGTT 297
Query 442 CTAATTTCTTTAGAATTG-CACTTGATCATAATTTCACTAAAGGCCGTAGCAAA-GAACT 499
||| || ||||| ||| | || |||| || ||||||||||||||||| || || |||||
Sbjct 298 CTA-TT-CTTTA-AATCGGCAGTTGAGCAGAATTTCACTAAAGGCCGCAG-AACTGAACT 353
Query 500 AGTATTCTCTTCATGTCTCTACTTGACTTGCAGGCAATTCAAA-TTGGCGGTTCTTCTTA 558
|||| |||| ||||||||||||||||||||| |||| || || || |||||||||
Sbjct 354 AGTACAGGCTTCCTGTCTCTACTTGACTTGCAGGGAATTGAACGTTC-CGTTTCTTCTTA 412
Query 559 TTGATTTTTCAAGCTACCTTCGTGTTAGCGTTTACGATTTAGGTTCTGTGTATTTGCAAC 618
||||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct 413 TTGATTTCTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAAC 472
Query 619 TCTGTGACATGCTCTACATTACAGAAAACCACAACTATGAGAAA-CTTGTTGATCCTTCA 677
||||||| ||||| |||||| | || || || || ||||| ||| |||||||| ||||||
Sbjct 473 TCTGTGAAATGCTGTACATTGCGGATAATCAAAATTATGA-AAAGCTTGTTGACCCTTCA 531
Query 678 ATTTTCATTCC-TCGATTCTCAAACATGTTATTGAAAGGTGCACACAATAATAAA-CTC- 734
|||||||| | ||||||||||||||| ||||||||||| ||||| ||||||| ||
Sbjct 532 ATTTTCAT-CGATCGATTCTCAAACATCTTATTGAAAGGA--ACACA-TAATAAAGCTGT 587
Query 735 -GTGCTAACGGCTACA-CACATTATAGCTAGTATGAAGAGAGATTGGATGCAGACCGGAC 792
||| ||| |||| | | ||||||||||||||||||| |||||||||| |||||||| |
Sbjct 588 TGTGAAAACAGCTATAGC-CATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCC 646
Query 793 GGAAACCAAGTGGAATATGTGGAGCAGCACTCTATACAGCTGCACTTTCTCATGGTATCA 852
|||| || ||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct 647 GGAAGCCTAGTGGAATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCA 706
Query 853 AGTGCTCCAAGACAGATATCGTGAACATTGTGCATATATGCGAAGCAACCCTAACTAAAA 912
||||||| ||| ||||||| || ||||||||||||||||| |||||||| ||||| |||
Sbjct 707 AGTGCTCTAAGTCAGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTAACCAAAC 766
Query 913 GATTGATTGAGTTTGGAGATACCGAGGCTGCAAGTTTGACTGCAGATGAGCTCAGTAAAA 972
||||||||||||||||| |||| ||| ||| || ||| | || |||||| ||| |
Sbjct 767 GATTGATTGAGTTTGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAGATCAC-A--- 822
Query 973 CTGAAAGAGAAAA--AGAAACGGCTGCATTGCGAAGTAAAAGGAAGCCAAATTTTTACAA 1030
||||||||| | ||| | | | || | || | ||| |||| | ||||
Sbjct 823 --GAAAGAGAATCTCATAAAAGA-T-C-TT-C----TACCATGAAACCAACCTCAAACAA 872
Query 1031 AGAAGGAGTAGTGCTCTGTATGCATCAAGATTGTAAACCTGTTGATTATGGATTATGTGA 1090
||| || | ||||||||||||||||| ||| |||||||| ||| ||||||| ||||| |
Sbjct 873 AGA-GGCG--GTGCTCTGTATGCATCAGGATAGTAAACCTTTTGGTTATGGACTATGTAA 929
Query 1091 -GAGCTGTTACGATGAATTCATGACA-GTTTCTGGTGGACTTGAAGGTGGGTCGGATCCT 1148
|| ||| ||||| || ||||| | | |||||||||||||||| |||||||| || |||
Sbjct 930 AGA-CTGCTACGAAGATTTCATAA-ATGTTTCTGGTGGACTTGTTGGTGGGTCCGACCCT 987
Query 1149 CCCGCCTTCCAGCGAGCAGAGAAAGAGAGAATGGAGGAAAAAGCTTCTAGTGAAGAAAAC 1208
|| || |||||||| |||||||| ||| ||||||| |||| || |||| |||||||||
Sbjct 988 CCTGCTTTCCAGCGCGCAGAGAATGAGCGAATGGA--AAAA-GCAGCTAGAGAAGAAAAC 1044
Query 1209 GA 1210
||
Sbjct 1045 GA 1046
> Ahg317739 jgi|Araly1|317739|fgenesh1_pm.C_scaffold_3000755
Length=1803
Score = 918 bits (497), Expect = 0.0
Identities = 896/1082 (83%), Gaps = 54/1082 (5%)
Strand=Plus/Plus
Query 147 ATGGTGTGGTGTAAACATTGTGGGAAGAACGTTCCCGGAATACGCCCCTATGATGCTGCA 206
|||||||||||||| || || | |||||| ||||||||||||||||| ||||||| ||||
Sbjct 1 ATGGTGTGGTGTAACCACTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 60
Query 207 TTGTCATGTGATTTATGTGGCAGGATTTTGGAGAATTTCAATTTTTCTACTGAAGTTACA 266
||| ||||| |||||||||| ||||| |||||||| |||||||||||||| |||||||||
Sbjct 61 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAACTTCAATTTTTCTACAGAAGTTACA 120
Query 267 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCTTCTGGTAACATACTCAAG-AGTGTTCA 325
|||||||||||||||||||||||||||||||| || ||||||||| | | | ||||||||
Sbjct 121 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCCTCAGGTAACATAGTGA-GCAGTGTTCA 179
Query 326 GAGTGGCATGTC-AAGCTCACGTGAAAGGATA-ATCAGAAAAGCTACTGATGAGCTTATG 383
||||| || || ||||||||||||||||| | || |||| ||||| |||||| ||| |
Sbjct 180 AAGTGGGAT-TCCAAGCTCACGTGAAAGGAGATAT-AGAATAGCTAGAGATGAGTTTACG 237
Query 384 AATTTGAGAGATGCTTTGGGAATTGGTGATGACAGAGATGATGTTATTGTCATGGCT-T- 441
|||||||||||||| ||||||||||||||||| |||| |||||| |||| ||||||| |
Sbjct 238 AATTTGAGAGATGCATTGGGAATTGGTGATGAGAGAGCTGATGTGATTGACATGGCTGTT 297
Query 442 CTAATTTCTTTAGAATTG-CACTTGATCATAATTTCACTAAAGGCCGTAGCAAA-GAACT 499
||| || ||||| ||| | || |||| || ||||||||||||||||| || || |||||
Sbjct 298 CTA-TT-CTTTA-AATCGGCAGTTGAGCAGAATTTCACTAAAGGCCGCAG-AACTGAACT 353
Query 500 AGTATTCTCTTCATGTCTCTACTTGACTTGCAGGCAATTCAAA-TTGGCGGTTCTTCTTA 558
|||| |||| ||||||||||||||||||||| |||| || || || |||||||||
Sbjct 354 AGTACAGGCTTCCTGTCTCTACTTGACTTGCAGGGAATTGAACGTTC-CGTTTCTTCTTA 412
Query 559 TTGATTTTTCAAGCTACCTTCGTGTTAGCGTTTACGATTTAGGTTCTGTGTATTTGCAAC 618
||||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct 413 TTGATTTCTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAAC 472
Query 619 TCTGTGACATGCTCTACATTACAGAAAACCACAACTATGAGAAA-CTTGTTGATCCTTCA 677
||||||| ||||| |||||| | || || || || ||||| ||| |||||||| ||||||
Sbjct 473 TCTGTGAAATGCTGTACATTGCGGATAATCAAAATTATGA-AAAGCTTGTTGACCCTTCA 531
Query 678 ATTTTCATTCC-TCGATTCTCAAACATGTTATTGAAAGGTGCACACAATAATAAA-CTC- 734
|||||||| | ||||||||||||||| ||||||||||| ||||| ||||||| ||
Sbjct 532 ATTTTCAT-CGATCGATTCTCAAACATCTTATTGAAAGGA--ACACA-TAATAAAGCTGT 587
Query 735 -GTGCTAACGGCTACA-CACATTATAGCTAGTATGAAGAGAGATTGGATGCAGACCGGAC 792
||| ||| |||| | | ||||||||||||||||||| |||||||||| |||||||| |
Sbjct 588 TGTGAAAACAGCTATAGC-CATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCC 646
Query 793 GGAAACCAAGTGGAATATGTGGAGCAGCACTCTATACAGCTGCACTTTCTCATGGTATCA 852
|||| || ||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct 647 GGAAGCCTAGTGGAATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCA 706
Query 853 AGTGCTCCAAGACAGATATCGTGAACATTGTGCATATATGCGAAGCAACCCTAACTAAAA 912
||||||| ||| ||||||| || ||||||||||||||||| |||||||| ||||| |||
Sbjct 707 AGTGCTCTAAGTCAGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTAACCAAAC 766
Query 913 GATTGATTGAGTTTGGAGATACCGAGGCTGCAAGTTTGACTGCAGATGAGCTCAGTAAAA 972
||||||||||||||||| |||| ||| ||| || ||| | || |||||| ||| |
Sbjct 767 GATTGATTGAGTTTGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAGATCAC-A--- 822
Query 973 CTGAAAGAGAAAA--AGAAACGGCTGCATTGCGAAGTAAAAGGAAGCCAAATTTTTACAA 1030
||||||||| | ||| | | | || | || | ||| |||| | ||||
Sbjct 823 --GAAAGAGAATCTCATAAAAGA-T-C-TT-C----TACCATGAAACCAACCTCAAACAA 872
Query 1031 AGAAGGAGTAGTGCTCTGTATGCATCAAGATTGTAAACCTGTTGATTATGGATTATGTGA 1090
||| || | ||||||||||||||||| ||| |||||||| ||| ||||||| ||||| |
Sbjct 873 AGA-GGCG--GTGCTCTGTATGCATCAGGATAGTAAACCTTTTGGTTATGGACTATGTAA 929
Query 1091 -GAGCTGTTACGATGAATTCATGACA-GTTTCTGGTGGACTTGAAGGTGGGTCGGATCCT 1148
|| ||| ||||| || ||||| | | |||||||||||||||| |||||||| || |||
Sbjct 930 AGA-CTGCTACGAAGATTTCATAA-ATGTTTCTGGTGGACTTGTTGGTGGGTCCGACCCT 987
Query 1149 CCCGCCTTCCAGCGAGCAGAGAAAGAGAGAATGGAGGAAAAAGCTTCTAGTGAAGAAAAC 1208
|| || |||||||| |||||||| ||| ||||||| |||| || |||| |||||||||
Sbjct 988 CCTGCTTTCCAGCGCGCAGAGAATGAGCGAATGGA--AAAA-GCAGCTAGAGAAGAAAAC 1044
Query 1209 GA 1210
||
Sbjct 1045 GA 1046
> Ahg316772 jgi|Araly1|316772|fgenesh1_pm.C_scaffold_2001805
Length=1725
Score = 846 bits (458), Expect = 0.0
Identities = 896/1098 (82%), Gaps = 68/1098 (6%)
Strand=Plus/Plus
Query 147 ATGGTGTGGTGTAAACATTGTGGGAAGAACGTTCCCGGAATACGCCCCTAT-GATGCTGC 205
|||||||||||||| ||||||| |||||| ||||||||||| ||||||| | || | ||
Sbjct 1 ATGGTGTGGTGTAAGCATTGTGCGAAGAATGTTCCCGGAATTCGCCCCT-TCGACGGTGG 59
Query 206 ATTGTCATGTGATTTATGTGGCAGGATTTTGGAGAATTTCAATTTTTCTACTGAAGTTAC 265
||| |||||||||||||||| ||||||||||| || ||||||||||||||||| |||||
Sbjct 60 TTTGGCATGTGATTTATGTGGGAGGATTTTGGAAAACTTCAATTTTTCTACTGATGTTAC 119
Query 266 ATTCGTTAAGAATGCTGCTGGACAGAGCCAAGCTTCTGGTAACATACTCAAGAGTGTTCA 325
|||||||||||||| ||||||||||||||||| || |||||||| | | |||||||||
Sbjct 120 CTTCGTTAAGAATGCCGCTGGACAGAGCCAAGCGTCAGGTAACATTGTGACGAGTGTTCA 179
Query 326 GAGT-GGCATGTCAAGCTCACGTGAAAGGATAATCAGAAAAGCTACTGATGAGCTT-ATG 383
|||| ||| | ||||||||||||||||||| || |||| ||||| |||||| || | |
Sbjct 180 GAGTGGGC-TTTCAAGCTCACGTGAAAGGAGAAAGAGAATAGCTAGAGATGAG-TTAAGG 237
Query 384 AATTTGAGAGATGCTTTGGGAATTGGTGATGACAGAGATGATGTTATTGTCATGGCT-TC 442
||||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||| |
Sbjct 238 AATTTGAAAGATGCCTTGGGAATTGGTGATGAGAGAGATGATGTGATTGTCATGGCTGCC 297
Query 443 TAATTTCTTTAG-AATTGC-ACTTGATCATAATTTCACTAAAGGCCGTAGCAA-AGAACT 499
|| |||||| | ||| || || ||| || || ||||||||||| || || || |||||
Sbjct 298 GAA-TTCTTT-GAAATGGCAAC-TGACCAAAACTTCACTAAAGGGCGCAG-AACTGAACT 353
Query 500 AGTATTCTCTTCATGTCTCTACTTGACTTGCA-GGCAATTCAAATTGGCGGTTCTTCTTA 558
||| ||||| ||||||||||||||||||| || || ||||| || |||||||||
Sbjct 354 TGTACAGTCTTCCTGTCTCTACTTGACTTGCAGGGAAAAGAAAATT-CCGTTTCTTCTTA 412
Query 559 TTGATTTTTCAAGCTACCTTCGTGTTAGCGTTTACGATTTAGGTTCTGTGTATTTGCAAC 618
|||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct 413 TTGATTTTTCAAGCTACCTTCGAGTTAGCGTTTACGAGTTAGGTTCTGTGTACTTGCAAC 472
Query 619 TCTGTGACATGCTCTACATTACAG-AAAACCACAACTATGAGAAACTTGTTGATCCTTCA 677
||||||| ||||| ||| || | ||||| | ||||||||| | |||||||||||||||
Sbjct 473 TCTGTGAAATGCTGTACCTTGT-GCAAAACGAGAACTATGAGGAGCTTGTTGATCCTTCA 531
Query 678 ATTTTCATTCCTCGATTC-TCAAACATGTTATTGAAAGGTGCACACAATA-AT-AAAC-- 732
|| ||||||||||||||| | || || |||||||||||||||||||||| | |||
Sbjct 532 ATCTTCATTCCTCGATTCATGAA-CAACTTATTGAAAGGTGCACACAATATAACAAAAAA 590
Query 733 T--C-G---T--G--CTA----ACGGCTACACACATTATAGCTAGTATGAAGAGAGATTG 778
| | | | | || ||||||||| |||||||| |||||||||||||||||||
Sbjct 591 TGTCTGGGATAAGGTCTTTGGTACGGCTACAAACATTATATCTAGTATGAAGAGAGATTG 650
Query 779 GATGCAGACCGGACGGAAACCAAGTGGAATATGTGGAGCAGCACTCTATACAGCTGCACT 838
|||||||||||| |||||||||||||||||||||||||||||| | || | |||||||||
Sbjct 651 GATGCAGACCGGCCGGAAACCAAGTGGAATATGTGGAGCAGCAATTTACATAGCTGCACT 710
Query 839 TTCTCATGGTATCAAGTGCTCCA-AGACAGATATCGTGAACATTGTGCATATATGCGAAG 897
|||||||||||||| |||||| | || ||||||| | || ||||||||||| || ||||
Sbjct 711 TTCTCATGGTATCATGTGCTCTAGAG-CAGATATTGCAAAAATTGTGCATATGTGTGAAG 769
Query 898 CAACCCTAACTAAAAGATTGATTGAGTTTGG-AGATACCGAGGCTGCAAGTTTGACTGCA 956
|||| |||| |||||||||| |||||||| | ||||| |||||| |||||| ||||
Sbjct 770 CAACAATAACCAAAAGATTGAATGAGTTTGCTA-ATACCAAGGCTGGAAGTTTAACTGTT 828
Query 957 GATGAGCTC-AGTAAAA-CTGAAA-GAGAAAAAG-AAACGGCTGCATTGCGAAGTAAAAG 1012
|||||||| | ||||| | ||| || | | ||| | || || | || |
Sbjct 829 GATGAGCTTGA-TAAAAGC-GAACCGATATCGCGTAAA-GAA-GCTTTT--ACCCCAA-G 881
Query 1013 GAAGCCAAATTTTTACAAAGAAGGAGTAGTGCTCTGT-ATGCATCAAG-ATTGTAAACC- 1069
| ||||||| | || |||||||||||| |||| | ||| ||| ||| |||| |
Sbjct 882 -A--CCAAATTCTGAC---GAAGGAGTAGTGAACTGTCAA-CAT-AAGGATT-TAAAACG 932
Query 1070 TGTTGATTATGGATTATGTGAGAGCTGTTACGATGAATTCATGACAGTTTCTGGTGGACT 1129
| ||| ||||||||||||| |||||||| ||||||| ||||| | | ||||||||||| |
Sbjct 933 TTTTGGTTATGGATTATGTAAGAGCTGTCACGATGATTTCATTAAAATTTCTGGTGGAAT 992
Query 1130 TGAAGGTGGGTCGGATCCTCCCGCCTTCCAGCGAGCAGAGAAAGAGAGAATGGAGGAAAA 1189
|| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct 993 TGTTGGTGGGTCGGATCCTCCTGCTTTCCAGCGAGCAGAGAAAGAGAGAATGGA--AAAA 1050
Query 1190 AGCTTCTAGTGAAGAAAA 1207
|| |||| ||||||||
Sbjct 1051 -GCAGCTAGAGAAGAAAA 1067
> Ahg346626 jgi|Araly1|346626|fgenesh1_pg.C_scaffold_5000018
Length=1599
Score = 797 bits (431), Expect = 0.0
Identities = 888/1100 (81%), Gaps = 66/1100 (6%)
Strand=Plus/Plus
Query 147 ATGGTGTGGTGTAAACATTGTGGGAAGAACGTTCCCGGAATACGCCCCTAT-GATGCTGC 205
|||||||||||||| ||||||| |||||| ||||||||||| ||||||| | || | ||
Sbjct 1 ATGGTGTGGTGTAACCATTGTGCGAAGAATGTTCCCGGAATTCGCCCCT-TCGACGGTGG 59
Query 206 ATTGTCATGTGATTTATGTGGCAGGATTTTGGAGAATTTCAATTTTTCT-ACTGAAGTTA 264
||| |||||||||||||||| ||||| ||||| || |||||||||||| | ||||||||
Sbjct 60 TTTGGCATGTGATTTATGTGGGAGGATATTGGAAAACTTCAATTTTTCTGA-TGAAGTTA 118
Query 265 CATTCGTTAAGAATGCTGCTGGACAGAGCCAAGCTTCTGGTAACATACTCAAGAGTGTTC 324
|||||||||||||||| ||||||||||||||||| || ||||||||| | | ||||||||
Sbjct 119 CATTCGTTAAGAATGCGGCTGGACAGAGCCAAGCGTCAGGTAACATAGTGACGAGTGTTC 178
Query 325 AGAGTGGCATGT-CAAGCTCACGTGAAAGGATAATCAGAAAAGCTACTGATGAGCTTATG 383
||||||| || | |||||||||||| | | | | | |||| ||||| |||||| ||| |
Sbjct 179 AGAGTGGGAT-TCCAAGCTCACGTGTACGAAGATTTAGAATAGCTAGAGATGAGTTTAGG 237
Query 384 AATTTGAGAGATGCTTTGGGAATTGGTGATGACAGAGATGATGTTATTGTCATGGCT-TC 442
||||||| |||||| ||||||||||||||||| ||||||||||| |||| || |||| |
Sbjct 238 AATTTGAAAGATGCCTTGGGAATTGGTGATGAAAGAGATGATGTGATTGACACGGCTGCC 297
Query 443 TAATTTCTTTAG-AATTGC-ACTTGATCATAATTTCACTAAAGGCCGTAGCAA-AGAACT 499
| |||||| | ||| || || ||| || || ||||| ||||| || || || |||||
Sbjct 298 CGA-TTCTTT-GAAATGGCAAC-TGAACAAAACTTCACCAAAGGGCGCAG-AACTGAACT 353
Query 500 AGTATTCTCTTCATGTCTCTACTTGACTTGCAG-GCAATTCAAATTGGCGGTTCTTCTTA 558
||| ||||| |||||||||||||||||||| | || ||||| || |||| ||||
Sbjct 354 TGTACAGTCTTCCTGTCTCTACTTGACTTGCAGAGAAAAGAAAATT-CCGTTTCTACTTA 412
Query 559 TTGATTTTTCAAGCTACCTTCGTGTTAGCGTTTACGATTTAGGTTCTGTGTATTTGCAAC 618
|||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct 413 TTGATTTTTCAAGCTACCTTCGAGTTAGCGTTTACGAGTTAGGTTCTGTGTACTTGCAAC 472
Query 619 TCTGTGACATGCTCTACATTACAG-AAAACCACAACTATGAGAAACTTGTTGATCCTTCA 677
||||||| ||| ||||| || | ||||| ||||||||| | |||||||||||||||
Sbjct 473 TCTGTGAAATGTTCTACCTT-GTGCAAAACGGGAACTATGAGGAGCTTGTTGATCCTTCA 531
Query 678 ATTTTCATTCCTCGATTC-TCAAACATGTTATTGAAAGGTGCACAC-A-AT---AATAAA 731
|| |||||||||| |||| | |||| |||||||||||||||||| | || || |||
Sbjct 532 ATCTTCATTCCTCAATTCAT-GAACAACTTATTGAAAGGTGCACACAATATAGCAAAAAA 590
Query 732 ---C-TCG-T---G-C-T---AACGGCTACACACATTATAGCTAGTATGAAGAGAGATTG 778
| | | | | | | ||||||||| |||||||| |||||||||||||||||||
Sbjct 591 TGTCTTGGATAAGGTCTTGGGTACGGCTACAAACATTATATCTAGTATGAAGAGAGATTG 650
Query 779 GATGCAGACCGGACGGAAACCAAGTGGAATATGTGGAGCAGCACTCTATACAGCTGCACT 838
|||||||||||| |||||||||||||||||||||||||||||| | || | |||||||||
Sbjct 651 GATGCAGACCGGCCGGAAACCAAGTGGAATATGTGGAGCAGCAATTTACATAGCTGCACT 710
Query 839 TTCTCATGGTATCAAGTGCTCCAAGACAGATATCGTGAACATTGTGCATATATGCGAAGC 898
|||||||||||||| |||||| | | ||||||| | || ||||||||||| || |||||
Sbjct 711 TTCTCATGGTATCATGTGCTCTAGGGCAGATATTGCAAAAATTGTGCATATGTGTGAAGC 770
Query 899 AACCCTAACTAAAAGATTG-ATTGAGTTTGG-AGATACCGAGGCTGCAAGTTTGACTGCA 956
||| |||| ||||||||| || ||||||| | ||||||||||||||||||| ||||
Sbjct 771 AACAATAACCAAAAGATTGGAT-GAGTTTGCTA-ATACCGAGGCTGCAAGTTTAACTGTT 828
Query 957 GATGAGCTC-AGTAAAA-CTGAAAGAGAAAAAGAAACGGCTGCATTGCGAAGTAAAAGGA 1014
|||||||| | ||||| | |||| | | | | || || | | || |
Sbjct 829 GATGAGCTTGA-TAAAAGC-GAAA-ATATATTG---CG--TGAAAAACCTTTTAGCCC-A 879
Query 1015 AG-CCAAATTTTTACAAAGAAGGAGTAGTGCTCTGTATGCATCAAG-ATTGTAAACC-TG 1071
|| ||||||| | || |||||||||||| ||||| |||| ||| ||| |||| | |
Sbjct 880 AGACCAAATTCTGAC---GAAGGAGTAGTGAACTGTAAGCAT-AAGGATT-TAAAACGTT 934
Query 1072 TTGATTAT-GGATTATGTGAGAGCTGTTACGATGAATTCATGACAGTTTCTGGTGGACTT 1130
||| || | ||||||||| |||||||| |||||| ||||||| | ||||||||||| ||
Sbjct 935 TTGGTT-TCGGATTATGTAAGAGCTGTCACGATGCTTTCATGAAAATTTCTGGTGGAGTT 993
Query 1131 GAAGGTGGGTCGGATCCTCCCGCCTTCCAGCGAGCAGAGAAAGAGAGAATGGAGGAAAAA 1190
| ||||||||||||||||| || ||||||||| ||||||||||||||||||| ||||
Sbjct 994 GTTGGTGGGTCGGATCCTCCTGCTTTCCAGCGACCAGAGAAAGAGAGAATGGA--AAAA- 1050
Query 1191 GCTTCTAGTGAAGAAAACGA 1210
|| |||| |||| ||||||
Sbjct 1051 GCAGCTAGAGAAGTAAACGA 1070
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68333899530
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5