BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G45290.1 Length=2598 Score E Sequences producing significant alignments: (Bits) Value Ahg486548 jgi|Araly1|486548|fgenesh2_kg.5__2540__AT3G60750.1 2278 0.0 Ahg943752 jgi|Araly1|943752|scaffold_604296.1 1386 0.0 Ahg927965 jgi|Araly1|927965|scaffold_300422.1 248 1e-64 > Ahg486548 jgi|Araly1|486548|fgenesh2_kg.5__2540__AT3G60750.1 Length=2844 Score = 2278 bits (1233), Expect = 0.0 Identities = 1913/2241 (85%), Gaps = 48/2241 (2%) Strand=Plus/Plus Query 56 ATGGCTTCTACTTCTTCTCTAGCGCTCTCACAAGCTCTCCTTA-CACGAGCCATCTCTCA 114 ||||||||||||||||| || || ||||| |||||||||| || | || || |||||||| Sbjct 287 ATGGCTTCTACTTCTTCCCTCGCTCTCTCTCAAGCTCTCC-TAGCTCGTGCAATCTCTCA 345 Query 115 CAATGGCTCTGA-AAACTGCGTCTCTATACCAGCTTTCTCTGCTCTCAAATCCACTTCTC 173 | |||||||||| ||| | | ||| ||||||||||||||| ||||||||||| | Sbjct 346 CCATGGCTCTGACCAAC-GTGGATCTTTACCAGCTTTCTCTGGACTCAAATCCACCGGTT 404 Query 174 CACGCACCAGTGGCACCATCTCTTCCCGTCGACGAAACGC-C--TCCACGATCAGTCA-C 229 |||| || | | | | || || |||||||| | ||| | |||| || || | | Sbjct 405 CACGTGCC--T--CTGC-T-TCGTCTCGTCGACGTATCGCTCAATCCATGAACAAAAACC 458 Query 230 --TCTCTCCGCCCTCTGGTTCGTGCAGCCGCCGTAGAGGCAATCGTGACAAGTTCTGATT 287 |||||||| ||||| ||||| || || || || ||| | | | | ||| |||||| Sbjct 459 GTTCTCTCCGTCCTCTTGTTCGCGCTGCAGCTGTTGAGACTGTTGAGCCAACCACTGATT 518 Query 288 CGTCCCTGGTTGATAAGTCGGTGAACACGATCAGGTTTCTGGCAATAGATGCGGTTGAGA 347 |||| | ||||| || ||||| ||| |||| |||||| |||| || |||||||| |||| Sbjct 519 CGTCGATTGTTGACAAATCGGTCAACTCGATTAGGTTTTTGGCTATCGATGCGGTGGAGA 578 Query 348 AGGCGAAATCAGGTCATCCAGGTCTTCCTATGGGCTGTGCTCCGATGTCTCACATTTTGT 407 ||||||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||| Sbjct 579 AGGCGAACTCAGGTCATCCTGGTCTTCCTATGGGTTGTGCTCCGATGGCTCACATTTTGT 638 Query 408 ACGATGAAGTCATGAAGTATAACCCCAAGAATCCTTACTGGTTTAACCGTGATCGTTTCG 467 | ||||| ||||||| ||||||||||||||| ||||| ||||| |||||||| || |||| Sbjct 639 ATGATGAGGTCATGAGGTATAACCCCAAGAACCCTTATTGGTTCAACCGTGACCGATTCG 698 Query 468 TTCTCTCTGCTGGACATGGATGCATGTTGCAATACGC-TCTGCTTCACCTTGCTGGCTAC 526 |||| ||||||||||||||||| ||||||| ||||| | ||||||| |||||||||||| Sbjct 699 TTCTATCTGCTGGACATGGATGTATGTTGCTTTACGCGT-TGCTTCATCTTGCTGGCTAC 757 Query 527 GACAGCGT-TAGGGAGGAAGATTTGAAG-AGCTTCCGTCAATGGGGAAGTAAGACTCCAG 584 ||||| || | |||||||||||||||| || ||||||||||||||||| ||||| |||| Sbjct 758 GACAGTGTCCA-GGAGGAAGATTTGAAGCAG-TTCCGTCAATGGGGAAGCAAGACACCAG 815 Query 585 GACATCCTGAGAATTTTGAGACTCCTGGTGTTGAAGCCACTACTGGTCCTCTTGGACAAG 644 |||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| Sbjct 816 GACATCCTGAGAATTTCGAGACTCCTGGAATTGAAGTCACTACTGGTCCTCTTGGACAAG 875 Query 645 GTATTGCAAATGCTGTTGGTTTAGCTCTTGCGGAGAAGCATTTGGCTGCTAGATTTAACA 704 | || || ||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 876 GAATCGCTAATGCTGTTGGTTTAGCTCTTGCTGAGAAGCATTTGGCTGCTAGATTCAACA 935 Query 705 AACCTGACAATG-AGATTGTTGACCACTACACGTATTCGATTCTTGGAGATGGTTGTCAG 763 ||||||| || || |||| ||||||||||| ||| |||| |||||||||||||||||| Sbjct 936 AACCTGATGCTGAAG-TTGTCGACCACTACACATATGCGATCCTTGGAGATGGTTGTCAG 994 Query 764 ATGGAAGGG-ATTTCAAATGAAGTTTGCTCTCTAGCTGGTCACTGGGGACTTGGAAAGCT 822 |||| |||| ||||| ||||||| ||||||||||||||| |||||||||||||||||||| Sbjct 995 ATGG-AGGGTATTTCTAATGAAGCTTGCTCTCTAGCTGGCCACTGGGGACTTGGAAAGCT 1053 Query 823 AATCGCTTTCTACGATGACAATCACATTTCCATTGATGGAGACACAGATATTGCTTTTAC 882 || |||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct 1054 CATTGCTTTCTACGATGACAATCACATTTCCATTGATGGAGACACAGAAATTGCCTTCAC 1113 Query 883 CGAGAGCGTGGACAAACGCTTT-GAAGCTCTTGGATGGCATGTTATCTGGGTAAAGAATG 941 |||| ||||||| | || ||| ||||| ||||||||||||||||||||||| ||||||| Sbjct 1114 TGAGAACGTGGACCAGCG-TTTCGAAGCCCTTGGATGGCATGTTATCTGGGTGAAGAATG 1172 Query 942 GAAACAATGGTTATGATGAGATCCGTGCTGCCATTAGGGAAGCTAAGGCTGTAACAGACA 1001 |||||| ||| ||||| ||||||||||||||||||| ||||||||| ||||| ||||||| Sbjct 1173 GAAACACTGGGTATGACGAGATCCGTGCTGCCATTAAGGAAGCTAAAGCTGTTACAGACA 1232 Query 1002 AGCCCACTTTGATTAAGGTCACTACTACAATTGGTTATGGTTCTCCCAACAAGGCAAACT 1061 |||| || ||||| |||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct 1233 AGCCTACATTGATCAAGGTCACTACTACCATTGGTTATGGGTCTCCCAACAAGGCGAACT 1292 Query 1062 CATACAGTGTCCATGGAGCTGCGCTTGGTGAGAAGGAAGTTGAGGCTACCCGAAACAATC 1121 |||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||| || | Sbjct 1293 CATACAGTGTCCATGGTGCTGCACTTGGCGAGAAGGAAGTTGAGGCTACCAGAAATAACC 1352 Query 1122 TTGGGTGGCCATATGAGCCGTTCCATGTACCTGAGGATGTCAAAAGCCATTGGAGCCGTC 1181 |||| ||||| |||||||| ||||| |||||||| ||||| |||||||| ||||| |||| Sbjct 1353 TTGGATGGCCGTATGAGCCTTTCCAGGTACCTGACGATGTTAAAAGCCACTGGAGTCGTC 1412 Query 1182 ACACGCCCGAAGGGGCTGCTCTTGAAGCTGATTGGAATGCCAAA-TTTGCAGCTTATGAG 1240 | || || ||||| ||| |||||||| |||| |||| ||| ||| |||||||| ||||| Sbjct 1413 ATACACCTGAAGGAGCTACTCTTGAATCTGACTGGAGTGC-AAAGTTTGCAGCATATGAA 1471 Query 1241 AAGAAATATCCGGAGGAAGCTGCAGAGTTGAAATCTATTATCTCAGGTGAATTGCCCGTT 1300 ||||| || || ||||||||||| |||||||||||||||||| | |||||||| || | | Sbjct 1472 AAGAAGTACCCAGAGGAAGCTGCTGAGTTGAAATCTATTATCACGGGTGAATTACCTGCT 1531 Query 1301 GGTTGGGAGAAGGCACTTCCTACATATACACCAGACTCTCCGGGTGATGCCACCAGAAAC 1360 || ||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||| Sbjct 1532 GGCTGGGAGAAGGCTCTACCTACATACACACCAGAGTCTCCAGGTGATGCCACCAGAAAC 1591 Query 1361 CTGTCTCAGCAATGTCTTAACGCACTTGCGAAAGCTGTGCCTGGTTTTCTTGGTGGGAGT 1420 ||||| ||||||||||||||||| ||||| |||| ||| || ||||| |||||||| ||| Sbjct 1592 CTGTCACAGCAATGTCTTAACGCCCTTGCTAAAGTTGTTCCCGGTTTCCTTGGTGGAAGT 1651 Query 1421 GCTGACCTTGCATCTTCCAACATGACAATGCTTAAAGCATTCGGCAACTTCCAAAAAGCC 1480 |||||||||||||| |||||||||||| |||| ||||| || ||| |||||||||| ||| Sbjct 1652 GCTGACCTTGCATCATCCAACATGACATTGCTGAAAGCCTTTGGCGACTTCCAAAAGGCC 1711 Query 1481 ACACCTGAAGAAAGAAACCTTAGATTTGGTGTCAGGGAACATGGTATGGGAGCTATCTGC 1540 ||||||||||||||||| ||||| |||||||| ||||| || || |||||||| ||| || Sbjct 1712 ACACCTGAAGAAAGAAATCTTAGGTTTGGTGTTAGGGAGCACGGAATGGGAGCCATCAGC 1771 Query 1541 AACGGCATTGCCCTTCACAGCCCCGGTTTTATCCCTTACTGCGCAACTTTCTTTGTGTTT 1600 ||||||||||||||||||||||| ||| ||||||||||||| || ||||||||||| || Sbjct 1772 AACGGCATTGCCCTTCACAGCCCTGGTCTTATCCCTTACTGTGCGACTTTCTTTGTCTTC 1831 Query 1601 ACTGACTATATGAGAGCTGCAATGAGAATCTCGGCTTTGTCTGAAGCTGGTGTTATATAC 1660 |||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| || Sbjct 1832 ACTGACTACATGAGAGGTGCCATGAGAATCTCGGCTTTGTCTGAAGCTGGTGTTATCTAT 1891 Query 1661 GTTATGACCCATGACTCCATTGGTCTTGGAGAAGATGGACCAACCCACCAACCCATCGAA 1720 ||||||||||||||||| ||||||||||| || |||||||||||||| || ||||| || Sbjct 1892 GTTATGACCCATGACTCTATTGGTCTTGGTGAGGATGGACCAACCCATCAGCCCATTGAG 1951 Query 1721 CACTTATC-CA-GTTTCCGTGCCATGCCCAATATTATGATGTTCCGTCCAGCTGATGGGA 1778 ||| ||| || |||||||||| |||||||| | | | ||||||||||| || ||||| | Sbjct 1952 CAC--ATCGCAAGTTTCCGTGCTATGCCCAACACTCTTATGTTCCGTCCTGCGGATGGAA 2009 Query 1779 ACGAAACAGCCGGTGCATACAAAATCGCTGTCACAAAACGTAAGACACCTTCTGTCTTAG 1838 |||||||||| ||||||||||| ||||||||||| ||||| ||||| || ||| |||||| Sbjct 2010 ACGAAACAGCGGGTGCATACAAGATCGCTGTCACCAAACGAAAGACCCCATCTATCTTAG 2069 Query 1839 C-CTTATCTAGACAAAAGCTGCCTCAACTTCCAGGAACATCTATTGAGAGC-GTCGAGAA 1896 | || ||||| |||||||||||||| |||||||| ||||| ||||| || ||||| || Sbjct 2070 CTCTG-TCTAGGCAAAAGCTGCCTCAGCTTCCAGGTACATCCATTGA-AGGAGTCGA-AA 2126 Query 1897 AGG-TGGATACACCATTTCTGACAACTCAACCGGTAACAAACCCGATGTGATCTTGATCG 1955 ||| |||||| || ||||||||| |||| | || ||||||||||||||||||||||| | Sbjct 2127 AGGGTGGATATACAATTTCTGACGACTCTTCAGGCAACAAACCCGATGTGATCTTGATTG 2186 Query 1956 GAACTGGATCAGAGCTAGAGATTGCTGCTCAAGCTGCAGAGAAGTTAAGGGAACAAGGCA 2015 |||||||||| ||||||||||||||||| || ||||||||| | | ||| || |||||| Sbjct 2187 GAACTGGATCTGAGCTAGAGATTGCTGCACAGGCTGCAGAGGTGCTGAGGAAAGAAGGCA 2246 Query 2016 AAAGTGTGAGAGTTGTTTCCTTT-GTATGTTGGGAGCT-TTTCGACGAGCAATCAGATGC 2073 ||| || ||||||||||| ||| || || ||||| || ||| |||||||| ||||||| Sbjct 2247 AAACCGTTAGAGTTGTTTC-TTTCGTGTGCTGGGAACTATTT-GACGAGCAGTCAGATGA 2304 Query 2074 ATACAAGGAAAGTGTTTTGCCATCTGATGTATCAGCTAGAGTTAGTATCGAAGCTGGATC 2133 ||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| | || Sbjct 2305 ATACAAGGAGAGTGTGTTGCCATCTGATGTATCAGCTAGAGTCAGTATCGAAGCAGCTTC 2364 Query 2134 GACTTTTGGATGGGGAAAGATCGTCGGAGGAAAAGGGAAA-TCGATTGGAATTGATACGT 2192 |||||| |||||||||||||| || ||||| ||||| ||| || ||||| ||| || | | Sbjct 2365 GACTTTCGGATGGGGAAAGATTGTTGGAGGCAAAGG-AAAGTCCATTGGTATTAATTCAT 2423 Query 2193 TTGGAGCAAGTGCACCAGCAGGAA-AGCTTTATAAAGAGTTTGGTATCACCATTGAAGCT 2251 | || || || ||||||||| | || || || ||||||||||||||| |||||||| Sbjct 2424 TCGGGGCCAGCGCACCAGCACCCTTA-CTCTACAAGGAGTTTGGTATCACCGTTGAAGCT 2482 Query 2252 ATGGTTGAAGCAGCCAAGTCA 2272 | ||||| || ||||||||| Sbjct 2483 GTTGTTGATGCGGCCAAGTCA 2503 > Ahg943752 jgi|Araly1|943752|scaffold_604296.1 Length=2245 Score = 1386 bits (750), Expect = 0.0 Identities = 1566/1958 (80%), Gaps = 63/1958 (3%) Strand=Plus/Plus Query 289 GTCCCTGGTTGATAAGTCGGTGAACACGATCAGGTTTCTGGCAATAGATGCGGTTGAGAA 348 ||| ||||| || || ||||| || ||||||||||| ||||| || |||||||| ||||| Sbjct 233 GTCTCTGGTAGACAAATCGGTCAATACGATCAGGTTCCTGGCGATCGATGCGGTCGAGAA 292 Query 349 GGCGAAATCAGGTCATCCAGGTCTTCCTATGGGCTGTGCTCCGAT-GTCTCACATTTTGT 407 || ||||| ||||| || || || |||||||| ||||| || || | | || || |||| Sbjct 293 AGCCAAATCGGGTCACCCGGGACTGCCTATGGGATGTGCCCCAATGGGC-CATATATTGT 351 Query 408 ACGATGAAGTCATG-AAGTATAACCCCAAGAATCCTTACTGGTTTAACCGTGATCGTTTC 466 ||| ||||| ||| || || ||||| ||||| |||| |||||| ||| | ||||||||| Sbjct 352 TCGACGAAGTGATGCAA-TACAACCCAAAGAACCCTTTCTGGTTCAACAGAGATCGTTTC 410 Query 467 GTTCTCTCTGCTGGACATGGATGCATGTTGCAATACG-CTCTGCTTCACCTTGCTGGCTA 525 || | ||||| || ||||| |||||| | || |||| || |||||||||| |||||||| Sbjct 411 ATTTTGTCTGCCGGTCATGGTTGCATGCTCCAGTACGCCT-TGCTTCACCTCGCTGGCTA 469 Query 526 CGACAGCGTTAGGGAGGAAGATTTGAAGAGCTTCCGTCAATGGGGAAGTAAGACTCCAGG 585 |||||| || ||||| || |||||||||| || ||||| |||||||||| ||||||||| Sbjct 470 CGACAGTGTCAGGGAAGATGATTTGAAGAATTTTCGTCAGTGGGGAAGTAGGACTCCAGG 529 Query 586 ACATCCTGAGAATTTTGAGACTCCTGGTGTTGAAGCCACTACTGGTCCTCTTGGACAAGG 645 |||||| |||||||||||||||||||||||||||| ||| |||||||| ||||| ||||| Sbjct 530 ACATCCCGAGAATTTTGAGACTCCTGGTGTTGAAGTCACCACTGGTCCACTTGGGCAAGG 589 Query 646 TATTGCAAATGCTGTTGGTTTAGCTCTTGCGGAGAAGCATTTGGCTGCTAGATTTAACAA 705 |||||||||||||||||||| || ||||||||||||||||||||||| || || ||||| Sbjct 590 AATTGCAAATGCTGTTGGTTTGGCACTTGCGGAGAAGCATTTGGCTGCCAGGTTCAACAA 649 Query 706 ACCTGACAATGAGATTGTTGACCACTACACGTATTCGATTCTTGGAGATGGTTGTCAGAT 765 ||||| |||||||||||| ||||| |||||||| | ||||| |||||||| |||||||| Sbjct 650 ACCTGGCAATGAGATTGTCGACCATTACACGTACGCTATTCTCGGAGATGGATGTCAGAT 709 Query 766 GGAAGGGATTTCAAATGAAGTTTGCTCTCTAGCTGGTCACTGGGGACTTGGAAAGCTAAT 825 |||||| ||| ||||||||| ||| ||||| || || |||||||| || || ||||| || Sbjct 710 GGAAGGAATTGCAAATGAAGCTTGTTCTCTTGCAGGGCACTGGGGTCTGGGGAAGCTCAT 769 Query 826 CGC-TTTCTACGATGACAATCACATTTCCATTGATGGAGACACAGATATTGCTTTTACCG 884 || ||| || |||||||| |||||||| ||||| || ||||| || ||||| ||||||| Sbjct 770 TGCCTTT-TATGATGACAACCACATTTCTATTGACGGTGACACGGAGATTGCCTTTACCG 828 Query 885 AGAGCGTGGACAA-ACGCTTTGAAGC-TCTTGGATGGCATGTTATCTGGGTAAAGAATGG 942 ||| ||||| || ||| ||| || |||||| ||||||||||| ||||| |||||||| Sbjct 829 AGAATGTGGA-AACACG-TTTCCAGGGTCTTGGTTGGCATGTTATATGGGTCAAGAATGG 886 Query 943 AAACAATGGTTATGATGAGATCCGTGCTGCCATTAGGGAAGCTAAGGCTGT-AACAGACA 1001 ||||| ||||||||||| |||||||||||||||| ||||||||||||||| || ||||| Sbjct 887 AAACACCGGTTATGATGAAATCCGTGCTGCCATTAAGGAAGCTAAGGCTGTTAA-AGACA 945 Query 1002 AGCCCACTTTGATTAAGGTCACTACTACAATTGGTTATGGTTCTCCCAACAAGGCAAACT 1061 | ||||||||||| ||| | ||||| |||||||||||||| || || ||||||||||| | Sbjct 946 AACCCACTTTGATCAAGATAACTACAACAATTGGTTATGGATCACCAAACAAGGCAAATT 1005 Query 1062 CATACAGTGTCCATGGA-GCTGCGCTTGGTGAGAAGGAAGTTGAGGCTACCCGAAACAAT 1120 | |||||||| || ||| | ||| || ||||| || |||||||| |||||| |||| ||| Sbjct 1006 CTTACAGTGTTCACGGAAG-TGCACTGGGTGAAAAAGAAGTTGATGCTACCAGAAAGAAT 1064 Query 1121 CTTGGGTGGCCATATGAGCCGTTCCATGTACCTGAGGATGTCAAAAGCCATTGGAGCCGT 1180 ||||| |||||||||| ||| |||||||| ||||| ||| |||| ||||| ||||| ||| Sbjct 1065 CTTGGATGGCCATATGGGCCTTTCCATGTTCCTGAAGATATCAAGAGCCACTGGAGTCGT 1124 Query 1181 CACACGCCCGAAGGG-GCTGCTCTTGAAGCTGATTGGAATGCCAAATTTGCAG-CTTATG 1238 || | ||| || || |||||||| ||| | || |||||||| || ||||| | || ||| Sbjct 1125 CATAT-CCCTAAAGGAGCTGCTCTCGAAACAGAATGGAATGCTAAGTTTGCTGACT-ATG 1182 Query 1239 AGAAGAAATATCCGGAGGAAGCTGCAGAGTTGAAATCTATTA-TCT-CAGGTGAA-TTGC 1295 ||||||| || || | ||||||||||| |||||||||| | | | | | | || || | Sbjct 1183 AGAAGAAGTACCCACAAGAAGCTGCAGAACTGAAATCTAT-AGT-TACTGTT-AACTTAC 1239 Query 1296 CCGTTGGTTGGGAGAAGGCACTT-CCTACATATACACCAGACTCTCCGGGTGATGCCACC 1354 | ||| ||||| || || || || || || || || || ||| | ||||| || Sbjct 1240 CTACTGGCTGGGAAAAATCA-TTGCCGACTTACACGCCCGAGAGTCCTGCAGATGCAACA 1298 Query 1355 AGAAACCTGTCTCAGCAATGTCTTAACGCACTTGCGAAAGCTG-TGCCTGGTTTTCTTGG 1413 |||||||| || || || |||||||| || ||||| |||| | | ||||| || || || Sbjct 1299 AGAAACCTCTCCCAACAGTGTCTTAATGCCCTTGC-AAAGGTTCTTCCTGGGTTCCTCGG 1357 Query 1414 TGGGAGTGCTGACCTTGCATCTTCCAACATGACAATGCTTAAAGCATTCGGCAACTTCCA 1473 |||||||||||||||||| || |||||||||||| |||| ||| || || ||||||| Sbjct 1358 TGGGAGTGCTGACCTTGCTTCATCCAACATGACATTGCTCAAAATGTTTGGGGACTTCCA 1417 Query 1474 AAA-AGCCACACCTGAAGAAAGAAACCTTAGATTTGGTGTCAGGGAACATGGTATGGGAG 1532 ||| | | |||||||||| ||||||||||| ||||||||||||||||| | ||||||| Sbjct 1418 AAAGAACG-CACCTGAAGAGAGAAACCTTAGGTTTGGTGTCAGGGAACACAGCATGGGAG 1476 Query 1533 CTATCTGCAACGGCATTGCCCT-TCACAGCCCCGGTTTTATCCCTTACTGCGCAACTTTC 1591 |||||||||| |||||| || | ||||||||| || | ||||||||||| || || ||| Sbjct 1477 CTATCTGCAATGGCATTACC-TGTCACAGCCCGGGGCTCATCCCTTACTGTGCTACATTC 1535 Query 1592 TTTGTGTTTACTGACTATATGAGAGCTGCAATGAGAATCTCGGCTTTGTCTGAAGCTGGT 1651 ||||| || || ||||| ||||||||||| || || |||| || ||||| |||| || Sbjct 1536 TTTGTCTTCACAGACTACATGAGAGCTGCCATCAGGCTCTCTGCCCTGTCTCAAGCAGGG 1595 Query 1652 GTTATATACGTTATGACCCATGACTCCATTGGTCTTGGAGAAGATGGACCAACCCACCAA 1711 ||||| ||||| ||||||||||| || || |||||||||||||||||||| |||||||| Sbjct 1596 GTTATCTACGTAATGACCCATGATTCAATCGGTCTTGGAGAAGATGGACCGACCCACCAG 1655 Query 1712 CCCATCGAACACT-TATCCAGTTTCCGTGCCATGCCCAATAT-TATGATGTTCCGTCCAG 1769 || || ||||| | | | || ||||||||||||||||| || | ||||| | | |||| Sbjct 1656 CCTATAGAACA-TGTGGCGAGCTTCCGTGCCATGCCCAACATCT-TGATGCTGAGGCCAG 1713 Query 1770 CTGATGGGAAC-GAAACAGCCGGTGCATACAAAATCGCTGTCACAAAAC-GTAAGACACC 1827 | ||||| ||| ||||| || || ||||||||| | ||||| | | ||| | |||| || Sbjct 1714 CGGATGG-AACTGAAACTGCGGGGGCATACAAAGTTGCTGT-AGAGAACAGAAAGAGGCC 1771 Query 1828 TTCTG-TCTTAGC-CTTATCTAGACAAAAGCTGCCTCAACTTCCAGGAACATCTATTGAG 1885 ||| | || | || || || ||||||||||||||||| || || ||||| || ||||| Sbjct 1772 TTC-GATCCTGGCTCTG-TCCAGACAAAAGCTGCCTCATCTACCTGGAACTTCGGTTGAG 1829 Query 1886 AGCGTCGAGAAAGGTGGATACACCATTTCTGACAACTCAACCGGTAACAAACCCGATGTG 1945 | || ||||| || ||||| || || |||||||| || ||||||||||| || || Sbjct 1830 GGAGTGGAGAAGGGGGGATATGTAATCTCAGACAACTCCACAGGTAACAAACCAGACGTA 1889 Query 1946 ATCTTGATCGGAACTGGATCAGAGCTAGAGATTGCTGCTCAAG-CTGCAGAGAAGTTAAG 2004 ||| |||| || || || || ||||||||||||||||| ||| ||| ||||||| |||| Sbjct 1890 ATCCTGATGGGGACAGGGTCGGAGCTAGAGATTGCTGCA-AAGGCTGGAGAGAAGCTAAG 1948 Query 2005 GGAACAAGGCAAAAGT-GTGAGAGTTGTTTC-CTT-TGTATGTTGGGAGCT-TTTCGACG 2060 ||| |||| || || |||||||| || || || || | |||||||||| ||| || | Sbjct 1949 AGAAGAAGG-AAGAGCAGTGAGAGTAGTGTCACTGGTG-A-GTTGGGAGCTGTTT-GATG 2004 Query 2061 AGCAAT-CAGATGCATACAAGGAAAGTGTTTTGCCATCTGATGTATCAGCTAGAGTTAGT 2119 | ||| | || | |||||| |||||||| || || || || || ||||| ||||| || Sbjct 2005 AACAAAGC-GAAGAATACAAAGAAAGTGTGTTACCTTCAGAGGTTTCAGCAAGAGTGAGC 2063 Query 2120 ATCGAAGCTGGATCGACTTTTGGATGGG-GAAAGATCGTCGGAGGAAAAGGGAAATCGAT 2178 || ||||| || ||||| ||||| |||| ||| ||| || || ||||| ||| | || Sbjct 2064 ATTGAAGCAGGGTCGACCTTTGGGTGGGAGAA-GATGGTTGGCTCCAAAGGAAAAGCCAT 2122 Query 2179 TGGAATTGATACGTTT-GGAGCAAGTGCACCAGCAGGA 2215 || | || | |||| ||||||||||||||||| ||| Sbjct 2123 CGGTGTAGACA-GTTTTGGAGCAAGTGCACCAGC-GGA 2158 > Ahg927965 jgi|Araly1|927965|scaffold_300422.1 Length=258 Score = 248 bits (134), Expect = 1e-64 Identities = 179/198 (90%), Gaps = 13/198 (7%) Strand=Plus/Plus Query 1523 GGTATGGGAGCTATCTGCAACGGCATTGCCCTTCACAGCCCCGGTTTTATCC-CTTACTG 1581 ||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||| Sbjct 33 GGTATGGGAGCTATCTGCAACGGCATTGCCCTTCACAGCCCCGGTTTTA-CCACATACTG 91 Query 1582 CGCAACTTTCTTTGTGTTTACTGACTATATGAGAGCTGCAATGAGAATCTCGGCTTTGTC 1641 ||||||||||||| || || | || | | | || || ||||||||||||||||||| Sbjct 92 CGCAACTTTCTTTTTG-TT--T-AC--T-T---A-CTACAGTGAGAATCTCGGCTTTGTC 140 Query 1642 TGAAGCTGGTGTTATATACGTTATGACCCATGACTCCATTGGTCTTGGAGAAGATGGACC 1701 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 TGAAGCTTCTGTTATATACGTTATGACCCATGACTCCATTGGTCTTGGAGAAGATGGACC 200 Query 1702 AACCCACCAACCCATCGA 1719 |||||||||||||||||| Sbjct 201 AACCCACCAACCCATCGA 218 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97968110140 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5