BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT2G45880.1

Length=2855
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg346398 jgi|Araly1|346398|fgenesh1_pg.C_scaffold_4002740          3369    0.0  
  Ahg887754 jgi|Araly1|887754|Al_scaffold_0371_3                       869    0.0  
  Ahg952093 jgi|Araly1|952093|scaffold_37100004.1                      313    6e-84
  Ahg935552 jgi|Araly1|935552|scaffold_403540.1                        307    3e-82
  Ahg935489 jgi|Araly1|935489|scaffold_403477.1                       73.1    1e-11
  Ahg935487 jgi|Araly1|935487|scaffold_403475.1                       73.1    1e-11


> Ahg346398 jgi|Araly1|346398|fgenesh1_pg.C_scaffold_4002740
Length=2034

 Score = 3369 bits (1824),  Expect = 0.0
 Identities = 1964/2032 (97%), Gaps = 7/2032 (0%)
 Strand=Plus/Plus

Query  624   ATGGCGACGGATATGCATAAACTGCTTGGAACTAGTGAAGAGGATGATGACGAAGAAATG  683
             ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct  1     ATGGCAACGGATATGCAGAAACTGCTTGGAACTAGTGAAGAGGATGATGATGAAGAAATG  60

Query  684   GACATGGATGTGAAGGAAGAAGATGATGGAGACCGACGAAATAGAGACAAACACGCAGCT  743
             || |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||
Sbjct  61    GATATGGATGTGAAGGAAGAAGATGATGGAGACCGACGAAATAGAGACACACGCGCTGCT  120

Query  744   TCAGGCAGTAGTAGTAATGACGAGTTTATGTTTCAGCAGTCAATGCAAGATCAAGTGGGC  803
             ||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  121   TCAGGC---AGTAGTAATGATGAGTTTATGTTTCAGCAGTCAATGCAAGATCAAGTGGGC  177

Query  804   ACTCCTGGGGGAGGAGGAAGTCGCAGAAGTAGACCGCTTGAAGAGAAGGAGCGAACTAAG  863
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  178   ACTCCTGGGGGAGGAGGAAGTCGCAGAAGTAGACCGCTTGAAGAGAAGGAGCGAACTAAG  237

Query  864   TTGAGAGAGCGCCATCGAAGGGCTATAACTGCAAGGATACTAGGCGGGTTACGAAGGCAT  923
             || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  238   TTAAGAGAGCGCCATCGAAGGGCTATTACTGCAAGGATACTAGGCGGGTTACGAAGGCAT  297

Query  924   GGGAATTATAACCTGAGAGTTAGAGCTGATATTAACGATGTTATCGCGGCTTTGGCAAGG  983
             ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  298   GGGAATTATAATCTCAGAGTTAGAGCTGATATTAACGATGTTATCGCGGCTTTGGCAAGG  357

Query  984   GAAGCTGGATGGGTTGTTCTTCCTGATGGAACTACTTTTCCATCCAAATCTCAGGGGACA  1043
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  358   GAAGCTGGATGGGTTGTTCTTCCTGATGGAACTACTTTTCCAGCCAAATCTCAGGGGACA  417

Query  1044  AAGCCTACTGGTGGTTCTTCTGCGGTTGCGGCAGGTTCATCAGCTTCTCACATTGCATCA  1103
             ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct  418   AAGCCTACTGGTGGTTCTTCTGCGGTTGCTGCAGGTTCATCAGCTTCTCACATTGCGTCA  477

Query  1104  CAGCAAACCTC-ACCTCCTGCTCTTAGAGTGGTATCATCTGGGCTTAGAAGCCCAGTGGA  1162
             ||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  478   CAGCAAACCTCTA-CTCCTGCTCTTAGAGTGGTATCATCTGGGCGTAGAAGCCCAGTGGA  536

Query  1163  ACTCAGCTCTTGCCGTATGAAAGGTGTTTTCACACCCGCTCCATCACCGTATGATATGCT  1222
             ||||||| |||||||||||||||||||||||||||||||| |||| || || ||||   |
Sbjct  537   ACTCAGCGCTTGCCGTATGAAAGGTGTTTTCACACCCGCTTCATCGCCATACGATAAATT  596

Query  1223  CCCAATC-CAATCTCCAGAACTGGTTGGCAGTGTAAATAAGGCTGAGGGGCTTGTTGGTT  1281
             ||||| | |||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct  597   CCCAA-CTCAATCTCCAGAACTGGTTGGTAGTGTCAATAAGGCTGAGGGGCTTGTTGGTT  655

Query  1282  GTTCAGTCGATGTTATCAACTCTAAACAAATTCTCGAGATTCCTCCAAATCTGACGGAGC  1341
             ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct  656   GTTCAGTTGATGTTATCAACTCTAAACAGATTCTCGATATTCCTCCAAATCTGACAGAGC  715

Query  1342  AAGATTTCTCTGGCACTCCTTATGTTCCGGTTTATGTGATGTTACCACTTGGGGTTATCA  1401
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  716   AAGATTTCTCTGGCACTCCTTATGTTCCGGTTTATGTGATGTTACCACTTGGGGTTATCA  775

Query  1402  ATATGAAGTGTGAATTGGCTGATCGAGATGGACTGCTAAAGCACTTACGAATATTGAAAT  1461
             ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct  776   ATATGAAGTGTGAATTGGCTGATCGAGATGGACTGGTAAAGCACTTAAGAATATTGAAAT  835

Query  1462  CAATCCATGTTGATGGGGTTAAAGTGGATTGTTGGTGGGGAATAGTTGAGGGTCATTCCC  1521
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  836   CAATCCATGTCGATGGGGTTAAAGTGGATTGTTGGTGGGGAATAGTTGAGGGTCATTCCC  895

Query  1522  CCCAGGAGTATAATTGGACTGGTTACAGGCAGCTTTTTCAGATGGTCCGCGATCTTAATC  1581
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  896   CCCAGGAGTATAATTGGACTGGTTATAGGCAGCTTTTTCAGATGGTCCGCGATCTTAATC  955

Query  1582  TTAAGATACAGGTTCTAATGTCCTTTCATGAATGTGGAGGCAATGTTGGTGATGATGTTT  1641
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  956   TTAAGATACAGGTTCTAATGTCCTTTCATGAATGTGGAGGCAATGTTGGTGATGATGTTT  1015

Query  1642  GCATCCCACTTCCTCATTGGGTGGCAGAAATAGGACGAACCAATCCGGACATATATTTCA  1701
             |||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||
Sbjct  1016  GCATCCCACTTCCTCACTGGGTGGCAGAAATAGGGCGAACCAATCCTGACATATATTTCA  1075

Query  1702  CTGATAGAGAGGGAAGACGAAACCCAGAATGCCTTTCTTGGGGTATTGACAAGGAACGTA  1761
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  1076  CTGATAGAGAGGGAAGACGAAACCCTGAATGCCTTTCTTGGGGTATTGACAAGGAACGTA  1135

Query  1762  TTTTAAGAGGCAGAACTGCACTTGAGGTGTACTTTGATTACATGAGAAGTTTTCGGATAG  1821
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1136  TTTTAAGAGGCAGGACTGCACTTGAGGTGTACTTTGATTACATGAGAAGTTTTCGGATAG  1195

Query  1822  AACTTGCAGAGTTTCTAGAGGATGGTGTAATATCTATGGTTGAAATTGGACTAGGCCCCT  1881
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1196  AACTTGCAGAGTTTCTAGAGGATGGTGTAATATCTATGGTTGAAATTGGACTAGGCCCCT  1255

Query  1882  GTGGAGAGTTACGGTACCCTTCTTGTCCCATAAAACACGGGTGGCGATATCCAGGTGTTG  1941
             |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct  1256  GTGGAGAGTTACGGTATCCTTCTTGTCCCATAAAACACGGGTGGCGATACCCAGGTGTTG  1315

Query  1942  GAGAGTTTCAGTGTTATGACAAGTATCTCTCGAAGAGCCTGAGAAAGGCAGCAGAATCAA  2001
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1316  GAGAGTTTCAGTGTTATGACAAGTATCTCTCGAAGAGCCTGAGAAAGGCAGCAGAATCAA  1375

Query  2002  GGGGGCACCTGTTTTGGGCTCGAGGCCCAGATAACACCGGCTCCTACAATTCTCAGCCGC  2061
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  1376  GGGGGCACCTGTTTTGGGCTCGAGGCCCAGATAACACCGGCTCCTACAATTCCCAGCCGC  1435

Query  2062  AGGGAACCGGTTTCTTCTGTGATGGAGGTGACTACGATGGCCTCTATGGAAGATTCTTTC  2121
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct  1436  AGGGAACCGGTTTCTTCTGTGATAGAGGTGACTACGATGGCCTCTATGGAAGATTCTTTC  1495

Query  2122  TCAAATGGTACTCACAGGTTTTGATAGACCATGCTGACCAAATCCTCTGTCTCGCTAAAC  2181
             ||| |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct  1496  TCACATGGTATTCACAGGTTTTGATAGATCATGCTGACCAAATCCTCTCTCTCGCTAAAC  1555

Query  2182  TAGTCTTCGACAGTAGCTGCATTGCAGCAAAGCTCCCAGACGTCCACTGGTGGTACAGAA  2241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1556  TAGTCTTCGACAGTAGCTGCATTGCAGCAAAGCTCCCAGACGTCCACTGGTGGTACAGAA  1615

Query  2242  CAGCAAGCCATGCCGCTGAGCTAACCGCTGGATTCTACAACCCGAGCAACCGAGATGGTT  2301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1616  CAGCAAGCCATGCCGCTGAGCTAACCGCTGGATTCTACAACCCGAGCAACCGAGATGGTT  1675

Query  2302  ATTCTGCAATTGCATCTACACTTAAGAAGCATGGTGCCACTCTGAGTTTTGTATCCGGAG  2361
             || ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct  1676  ATGCTGCAATTGCATCTACACTCAAGAAGCATGGTGCCACTCTAAGTTTTGTATCCGGAG  1735

Query  2362  AAGTGCAAGTTCTAAACCGTCCAGATGATTTCTCAGGAGCATTAGGAGAACCTGAGGCAG  2421
             |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct  1736  AAGTGCAAGTTCTAAACCGTTCGGATGATTTCTCAGGAGCATTAGGAGAACCTGAGGCAG  1795

Query  2422  TAGCTTGGCAGGTATTAAACGCTGCTTGGGACAGCGGTACACCGGTTGCTCGAGAGAACT  2481
             ||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct  1796  TAGCTTGGCAGGTGTTAAACGCTGCGTGGGACAGCGATACACCGGTTGCTCGAGAGAACT  1855

Query  2482  CGCTTGCTTGCCATGATAGAGTTGGTTATAACAAAATGTTAGAAAGCGTTAAGTTTCGGA  2541
             ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  1856  CGCTTCCTTGCCATGATAGAGTTGGGTATAACAAAATGTTAGAAAGCGTTAAGTTTCGGA  1915

Query  2542  ACGATCCAGATAGAAAACATTTGTCATCATTTGCCTATAGTAGACTCGTCCCAGCTCTCA  2601
             |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct  1916  ACGATCCAGATAGAAGGCATTTGTCATCATTTGCCTATAGTAGACTCGTCCCAGCTCTCA  1975

Query  2602  TGGAAGGACATAACATTGTCGAATTTGAGCGGTTTGTCAAGAAGTTGCATGG  2653
             ||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct  1976  TGGAAGGACATAACATTGTCGAATTTGAGCGGTTTGTGAAGAAATTGCATGG  2027


> Ahg887754 jgi|Araly1|887754|Al_scaffold_0371_3
Length=870

 Score =  869 bits (470),  Expect = 0.0
 Identities = 520/544 (96%), Gaps = 4/544 (1%)
 Strand=Plus/Plus

Query  948   GCTGATATTAACGATGTTATCGCGGCTTTGGCAAGGGAAGCTGGATGGGTTGTTCTTCCT  1007
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  283   GCTGATATTAACGATGTTATCGCGGCTTTGGCAAGGGAAGCTGGATGGGTTGTTCTTCCT  342

Query  1008  GATGGAACTACTTTTCCATCCAAATCTCAGGGGACAAAGCCTACTGGTGGTTCTTCTGCG  1067
             |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct  343   GATGGAACTACTTTTCCAGCCAAATCTCAGGGGACAAAGCCTACTGGTGGTTCTTCTGCG  402

Query  1068  GTTGCGGCAGGTTCATCAGCTTCTCACATTGCATCACAGCAAACCTC-ACCTCCTGCTCT  1126
             ||||| |||||||||||||||||||||||||| |||||||||||||| | ||||||||||
Sbjct  403   GTTGCTGCAGGTTCATCAGCTTCTCACATTGCGTCACAGCAAACCTCTA-CTCCTGCTCT  461

Query  1127  TAGAGTGGTATCATCTGGGCTTAGAAGCCCAGTGGAACTCAGCTCTTGCCGTATGAAAGG  1186
             |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct  462   TAGAGTGGTATCATCTGGGCGTAGAAGCCCAGTGGAACTCAGCGCTTGCCGTATGAAAGG  521

Query  1187  TGTTTTCACACCCGCTCCATCACCGTATGATATGCTCCCAATC-CAATCTCCAGAACTGG  1245
             |||||||||||||||| |||| || || |||||  |||||| | ||||||||||||||||
Sbjct  522   TGTTTTCACACCCGCTTCATCGCCATACGATATATTCCCAA-CTCAATCTCCAGAACTGG  580

Query  1246  TTGGCAGTGTAAATAAGGCTGAGGGGCTTGTTGGTTGTTCAGTCGATGTTATCAACTCTA  1305
             |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct  581   TTGGTAGTGTCAATAAGGCTGAGGGGCTTGTTGGTTGTTCAGTTGATGTTATCAACTCTA  640

Query  1306  AACAAATTCTCGAGATTCCTCCAAATCTGACGGAGCAAGATTTCTCTGGCACTCCTTATG  1365
             |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  641   AACAGATTCTCGATATTCCTCCAAATCTGACAGAGCAAGATTTCTCTGGCACTCCTTATG  700

Query  1366  TTCCGGTTTATGTGATGTTACCACTTGGGGTTATCAATATGAAGTGTGAATTGGCTGATC  1425
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  701   TTCCGGTTTATGTGATGTTACCACTTGGGGTTATCAATATGAAGTGTGAATTGGCTGATC  760

Query  1426  GAGATGGACTGCTAAAGCACTTACGAATATTGAAATCAATCCATGTTGATGGGGTTAAAG  1485
             ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct  761   GAGATGGACTGGTAAAGCACTTAAGAATATTGAAATCAATCCATGTCGATGGGGTTAAAG  820

Query  1486  TGGA  1489
             ||||
Sbjct  821   TGGA  824


 Score =  453 bits (245),  Expect = 3e-126
 Identities = 273/286 (95%), Gaps = 3/286 (1%)
 Strand=Plus/Plus

Query  624  ATGGCGACGGATATGCATAAACTGCTTGGAACTAGTGAAGAGGATGATGACGAAGAAATG  683
            ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct  1    ATGGCAACGGATATGCAGAAACTGCTTGGAACTAGTGAAGAGGATGATGATGAAGAAATG  60

Query  684  GACATGGATGTGAAGGAAGAAGATGATGGAGACCGACGAAATAGAGACAAACACGCAGCT  743
            || |||||||||||||||||||||||||||||||||||||||||||||| || ||| |||
Sbjct  61   GATATGGATGTGAAGGAAGAAGATGATGGAGACCGACGAAATAGAGACACACGCGCTGCT  120

Query  744  TCAGGCAGTAGTAGTAATGACGAGTTTATGTTTCAGCAGTCAATGCAAGATCAAGTGGGC  803
            ||||||   ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  121  TCAGGC---AGTAGTAATGATGAGTTTATGTTTCAGCAGTCAATGCAAGATCAAGTGGGC  177

Query  804  ACTCCTGGGGGAGGAGGAAGTCGCAGAAGTAGACCGCTTGAAGAGAAGGAGCGAACTAAG  863
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  178  ACTCCTGGGGGAGGAGGAAGTCGCAGAAGTAGACCGCTTGAAGAGAAGGAGCGAACTAAG  237

Query  864  TTGAGAGAGCGCCATCGAAGGGCTATAACTGCAAGGATACTAGGCG  909
            || ||||||||||||||||||||||| |||||||||||||||||||
Sbjct  238  TTAAGAGAGCGCCATCGAAGGGCTATTACTGCAAGGATACTAGGCG  283


> Ahg952093 jgi|Araly1|952093|scaffold_37100004.1
Length=323

 Score =  313 bits (169),  Expect = 6e-84
 Identities = 201/215 (93%), Gaps = 7/215 (3%)
 Strand=Plus/Plus

Query  1    GCCAAGCCTTAGCTTCACACACTCCTCTTTCTCTCAGACACGCTCGAGCGCTACACACGC  60
            |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  111  GCCAAGCCTTTGCTTCACACACTCCTCTTTCTCCCAGACACGCTCGAGCGCTACACACGC  170

Query  61   GCGAAAG-CTCGTCTTCCAA-T-TCACGCTGCACGCTCCTTCACGCG-CTTCCTCCATCT  116
            | ||||| |||||||||||| | |||||||||||||||||||||||| ||| ||| ||||
Sbjct  171  GTGAAAGCCTCGTCTTCCAATTCTCACGCTGCACGCTCCTTCACGCGCCTT-CTCTATCT  229

Query  117  CACGGCCAGATCCG-CCTCTTTTCACCCGCCGGAGATCCACCGTCTTCTTCTCCTCTCTC  175
            |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct  230  CACGGCCAGATCCGCCCT-TTTTCACCCGCCGGAGATCCACCGTCTTCTTCTCCTCTCTC  288

Query  176  TTGGTTTCGCTGACGGCGACAGAGGGGGAAACCTT  210
            |||||||||||||||||||||||  ||||| ||||
Sbjct  289  TTGGTTTCGCTGACGGCGACAGACTGGGAATCCTT  323


> Ahg935552 jgi|Araly1|935552|scaffold_403540.1
Length=323

 Score =  307 bits (166),  Expect = 3e-82
 Identities = 200/215 (93%), Gaps = 7/215 (3%)
 Strand=Plus/Plus

Query  1    GCCAAGCCTTAGCTTCACACACTCCTCTTTCTCTCAGACACGCTCGAGCGCTACACACGC  60
            |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  111  GCCAAGCCTTTGCTTCACACACTCCTCTTTCTCCCAGACACGCTCGAGCGCTACACACGC  170

Query  61   GCGAAAG-CTCGTCTTCCAA-T-TCACGCTGCACGCTCCTTCACGCG-CTTCCTCCATCT  116
            | ||||| |||||||||||| | |||||||||||||||||||||||| ||| ||| ||||
Sbjct  171  GTGAAAGCCTCGTCTTCCAATTCTCACGCTGCACGCTCCTTCACGCGCCTT-CTCTATCT  229

Query  117  CACGGCCAGATCCG-CCTCTTTTCACCCGCCGGAGATCCACCGTCTTCTTCTCCTCTCTC  175
            |||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct  230  CACGGCCAGATCCGCCCT-TTTTCACCCGCCGGAGATCTACCGTCTTCTTCTCCTCTCTC  288

Query  176  TTGGTTTCGCTGACGGCGACAGAGGGGGAAACCTT  210
            |||||||||||||||||||||||  ||||| ||||
Sbjct  289  TTGGTTTCGCTGACGGCGACAGACTGGGAATCCTT  323


> Ahg935489 jgi|Araly1|935489|scaffold_403477.1
Length=1282

 Score = 73.1 bits (39),  Expect = 1e-11
 Identities = 41/42 (98%), Gaps = 0/42 (0%)
 Strand=Plus/Minus

Query  2301  TATTCTGCAATTGCATCTACACTTAAGAAGCATGGTGCCACT  2342
             ||| ||||||||||||||||||||||||||||||||||||||
Sbjct  136   TATGCTGCAATTGCATCTACACTTAAGAAGCATGGTGCCACT  95


> Ahg935487 jgi|Araly1|935487|scaffold_403475.1
Length=1270

 Score = 73.1 bits (39),  Expect = 1e-11
 Identities = 41/42 (98%), Gaps = 0/42 (0%)
 Strand=Plus/Minus

Query  2301  TATTCTGCAATTGCATCTACACTTAAGAAGCATGGTGCCACT  2342
             ||| ||||||||||||||||||||||||||||||||||||||
Sbjct  124   TATGCTGCAATTGCATCTACACTTAAGAAGCATGGTGCCACT  83



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 107757303105


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5