BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G45900.1 Length=2163 Score E Sequences producing significant alignments: (Bits) Value Ahg483730 jgi|Araly1|483730|fgenesh2_kg.4__2790__AT2G45900.1 1458 0.0 Ahg497410 jgi|Araly1|497410|fgenesh2_kg.371__1__AT2G45900.1 1319 0.0 Ahg907815 jgi|Araly1|907815|Al_scaffold_0002_896 193 6e-48 > Ahg483730 jgi|Araly1|483730|fgenesh2_kg.4__2790__AT2G45900.1 Length=2109 Score = 1458 bits (789), Expect = 0.0 Identities = 884/931 (95%), Gaps = 2/931 (0%) Strand=Plus/Plus Query 1229 ACAACCATGAAGAAACAGAGTTTATGCCAGTTCCGGAAGACACTAGGATGGAAGAGGAAG 1288 ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 1175 ACAACTATGAAGAAACAGAGTTTATGCCATTTCCGGAAGACACTGGGATGGAAGAGGAAG 1234 Query 1289 AGCAGACTGTTATGGATTCGTTGTCTGAAGCAATTAGCTCTTCCATTATCCAACAAGATG 1348 || |||||||| | |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1235 AGAAGACTGTTCTCGATTCGTTGTCTGAAGAAATTAGCTCTTCCATTATCCAACAAGATG 1294 Query 1349 CATATATTGATGAGGATGAGCACAAACAACTTTTGGAAAAGGAAGTACTCAAAG-AGGGA 1407 ||||| |||||||||||||||| || ||||| |||||||||||||||||| | | |||| Sbjct 1295 CATATGTTGATGAGGATGAGCAGAAGCAACTCTTGGAAAAGGAAGTACTCGACGAAGGG- 1353 Query 1408 CAATCACCGTGTTCTCCACCAAACTCTTCAGTGAGAATGTCTGAATGCCAAGAAAACACC 1467 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1354 CGATTACCGTGTTCTCCACCAAACTCTTCAGTGAGAATGTCTGAATGCCAAGAAAATACC 1413 Query 1468 ACAGATGTATTGGGAAAGTCAAGTCCTGTATCTGTGCTTGAGCCTTTCTTTACAGATGAT 1527 ||||||||||||||||||||||||||||| || || ||||||||| |||||||||||||| Sbjct 1414 ACAGATGTATTGGGAAAGTCAAGTCCTGTGTCGGTTCTTGAGCCTCTCTTTACAGATGAT 1473 Query 1528 GACACTAGTCCAAACAGCTCCAGGTTCTCTTCAGCCGAAATGCGGATGCAACCACTGTGC 1587 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1474 GACACTAGTCCAAACAGCTCCAGGTTCTCTTCAGCCGAAGTGCGGATGCAACCACTGTGC 1533 Query 1588 ATAAGATTCGACGAACCTGATTTTCCAGGACCGGAGAAAGACAATGATGTCAAAACAAGA 1647 ||||||||||||||| |||||| |||| ||||||||||||||||||||| |||||| ||| Sbjct 1534 ATAAGATTCGACGAAGCTGATTCTCCAAGACCGGAGAAAGACAATGATGCCAAAACTAGA 1593 Query 1648 ATGGACGACAAGGAACTGGCACTTGAATACATTCAAGCCGTGGTGAAATCATCAGAGTTG 1707 ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1594 ATGGATGACAAGGAATTGGCACTTGAATACATTCAAGCCGTGGTGAAATCCTCAGAGTTG 1653 Query 1708 AACTGGGAAGAGCTTTTGGCGAGATCTTTTTATTCGGAGAAGATTCTTGAGCAGGCTCTA 1767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1654 AACTGGGAAGAGCTTTTGGCGAGATCTTTTTATTCGGAGAAGATTCTTGAGCAGGCTCTA 1713 Query 1768 ATGGATGACATAGATTTCTGTTCGACAAATCTCTGCAGCGATAAGAAACTCCTTTTTGAC 1827 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1714 ATGGATGACATAGATTTCTGTTCGACAAATCTATGCAGCGATAAGAAACTCCTTTTTGAC 1773 Query 1828 TGTATCAATGAAGTTCTTATGGAGTTTTGTGGACATGGCCCTTGGATTTCATTCGTCAAA 1887 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1774 TGTATCAATGAAGTTCTTATGGAGTTTTGTGGACATGGCCCTTGGATTTCATTCGTCAAA 1833 Query 1888 CCTGCAATGCACTTTTTTCCAGACATGGAAAATGCTGTTGAAGTGGTACAAGAAGAAGTT 1947 ||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1834 CCTTCAATACGGTTTTTTCCAGACATGGAAAATGCTGTTGAAGTGGTACAAGAAGAAGTT 1893 Query 1948 TACTGGCATCTCTTACCTTTGCCATCTCCTCACACACTAGACCAGATAGTGCGGAAAGAC 2007 ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct 1894 TACTGGCATCTCTTACCTTTGCCTTCTCCTCACACACTAGACCAGATAGTGCAGAAAGAC 1953 Query 2008 CTGGCTAGGACTGGAAACTGGATGGATCTCCGCTTTGATATTGGTTGCATCGTTTCTGAA 2067 |||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| Sbjct 1954 CTGGCTAGGACTGGAAACTGGATGGACCTCCACTTTGATATTGGTTGCATCGGTTCTGAA 2013 Query 2068 ACAGGTGAAATAATCCTTGATGAACTACTAGAAGAGATAATCAGCAATTGCAGAGACTTG 2127 ||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| Sbjct 2014 ACAGGTGAAATAATCCTTGATGAACTATTAGAAGAGATAATCAGCAACTGCACAGACTTG 2073 Query 2128 GTCCAACCTGAAAGAATCAACAAGCTGGTTC 2158 ||||||||||||| |||||||||| || ||| Sbjct 2074 GTCCAACCTGAAACAATCAACAAGGTGATTC 2104 Score = 839 bits (454), Expect = 0.0 Identities = 640/723 (89%), Gaps = 40/723 (6%) Strand=Plus/Plus Query 512 GCTGCAAGAAGAACCTGGTGGATGCATTTCAGGTCTTGGATTCTAAAGAAGAATCA---T 568 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 476 GCTGCAAGAAGAACCTGGACGATGCATTTCAGGTCTTGGATTCTAAAGAAGAATCATTCT 535 Query 569 TGAATATCGGTACACCAACTTCGGGAGATTCTCAGAGAATCAA--AG-AGACAC------ 619 ||||||||||||| |||| ||| ||||||||||||||||||| || ||||| Sbjct 536 TGAATATCGGTACGCCAATTTCAAGAGATTCTCAGAGAATCAATGAGCTGACACAATGTA 595 Query 620 -A-A-ACAATTGTAATTTTGAAGCCTGAACCAAATACCTTGGATGTTGGATCATCGCCTG 676 | | ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 596 GACATACAATTGTAATTTTGAAGCCTGAACCAAATAGCTTGGATGTTGGATCATCACCTG 655 Query 677 GAACACCTTCTACAGACAACAAGGCCAAAAATGAGAAATTCAGTTCTCGCTTTAGTCTCA 736 ||||||||||||||||||||||| ||||||||| || |||||||||||||||| ||||| Sbjct 656 GAACACCTTCTACAGACAACAAGACCAAAAATGGGAGGTTCAGTTCTCGCTTTATTCTCA 715 Query 737 GTAGAATCAGAAGAAGACTAAAGTTTGCGGTTGGAAAGAATCCATGCAATGCTCAACATG 796 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 716 GTAGAATCAGAAGAAGACTAAAGTTTGCTGTTGGAAATAATCCATGCAATGCTCAACATG 775 Query 797 ACTCTGATCCTGATCCTGATGCAGATGCATTGTCGTCTAGCATGAGTCAAAACTGTTGTT 856 ||||||||| |||||| | |||||||||||||||| |||||||||||||||||||| Sbjct 776 ACTCTGATCATGATCC---T---GATGCATTGTCGTCTAACATGAGTCAAAACTGTTGTT 829 Query 857 TGGGAGAAGAGATAGAGACCAATCCC------GG-G--TCGGATGGAGAAATC-TTGCCT 906 ||||||||| ||||||||| |||||| || | ||||||||||||| | |||||| Sbjct 830 TGGGAGAAGCGATAGAGACTAATCCCGGGAAGGGTGTTTCGGATGGAGAAA-CATTGCCT 888 Query 907 GACATTGCTTCAAAAGGTGAGGCTAATAAAGAGGATACTTTCCATGAAAGTGAAAAAGAT 966 ||||||||||||||| ||||||||||||| ||||| ||| |||||||||||| |||| Sbjct 889 GACATTGCTTCAAAACGTGAGGCTAATAAGGAGGACACTATCCATGAAAGTG---AAGAC 945 Query 967 TCCAAGAAGAGTATGTGTGGCATATACATTGCTGCCAAGAAACACCTGTCTGAAATGCTT 1026 || || |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 946 TCGAAAAAGAATATGTGTGGTATATACATTGCCGCCAAGAAACACCTGTCTGAAATGCTT 1005 Query 1027 GCAGAAGGAGACATAGATGCTGACTT-ACCGGATAAAGAAGTACCAAGAATCCTTGGGAA 1085 |||||||||||| |||||||| || ||||||||| |||||||||||||| ||||| || Sbjct 1006 GCAGAAGGAGAC---GATGCTGA-TTCACCGGATAAGGAAGTACCAAGAATTCTTGGAAA 1061 Query 1086 GATTCTTGCTCTCCCTGAGTTCTTCACACCAGAAAACAGTCCTAGAGTGACCTTGGCACT 1145 ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||| Sbjct 1062 GATTCTTGCTCTCCCTGAGTTCTCCACACCAGACAACAGTCCTAGAGTGGCCTTGGCACT 1121 Query 1146 TGATCATCAGATAATCGAAAAACCAAATATTCAGCAGTGCAGTTCAAAAGATTACTACTA 1205 |||||||||| || |||| |||||||| ||||||||||| |||||| |||||||| |||| Sbjct 1122 TGATCATCAGCTAGTCGATAAACCAAAGATTCAGCAGTGTAGTTCAGAAGATTACAACTA 1181 Query 1206 TGA 1208 ||| Sbjct 1182 TGA 1184 Score = 693 bits (375), Expect = 0.0 Identities = 449/483 (93%), Gaps = 11/483 (2%) Strand=Plus/Plus Query 1 ATGGAGAAAGAGATTTGTAGAAGACATCTTTCAAGAGAAGGGCTAGGATGTGTTTGGGTG 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1 ATGGAGAAAGAGATTTGTAGAAGACATCTTTCAAGAGAAGGGATAGGATGTGTTTGGGTG 60 Query 61 TTTATGAGCATGTTTGATTTTAGACATGGTGGATCTAACCAGAAGCTTTTGATGGATAAG 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTATGAGCATGTTTGATTTCAGACATGGTGGATCTAACCAGAAGCTTTTGATGGATAAG 120 Query 121 AAACGTCGAAGCAAGA-GAATCATCATAGGTAATAATGGAGTGTTTGAGACTAAGGTTGA 179 |||||| ||||||| | ||||||| | |||||||||||| ||||||| ||||||||||| Sbjct 121 AAACGTGGAAGCAA-ACGAATCAT-A--GGTAATAATGGAATGTTTGACACTAAGGTTGA 176 Query 180 GAAGCAGCTTACTTGTGACTGTGACTGTGA-TG--AGGAGAGTGAAGCTGAAATGCAGAG 236 |||||||||||||||||||||||||| ||| || |||||||||||||||| |||||||| Sbjct 177 GAAGCAGCTTACTTGTGACTGTGACTATGACTGTGAGGAGAGTGAAGCTGATATGCAGAG 236 Query 237 TGTCAAGAAACTCATAGAAGCTGAGATTGATGAGAAGACTACGCAAAAGTGTGAGGCGAG 296 |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 237 TGTCAAGAAACTCATAGAAGATGAGATTGATGAGAAGACTAAGCAAAAGTGTGAGGCGAG 296 Query 297 AAACCGAAAGAGGAGAAGTAGGACCTGCAGCAAAATCAGTGAAGATATCAATGTTTTGAT 356 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 297 AAACCGAAAGAGGAGAAGTAGAACCTGCAGCAAAATCAGTGAGGATATCAATGTTTTGAT 356 Query 357 TGCTGGTGATGATGATGATGATCATGCAGAGAAATCAGATAATGAGTGTCCGATAGTTTC 416 || |||||||||||||||| |||||||||||| ||||| || ||||||||| | |||| Sbjct 357 TGTTGGTGATGATGATGAT---CATGCAGAGAAAGCAGATGATCAGTGTCCGAGAATTTC 413 Query 417 TCATAACGAAGTGGATATGGTAAATGATGATTCCGAAGAGAAGTTCAGCGAGTTGATAAA 476 ||| || || |||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 414 TCAGAATGAGGTGGATTTGGTACCTGATGATTCCGAAGAGAAGTTCAGCGAGTTGATAAA 473 Query 477 GCG 479 ||| Sbjct 474 GCG 476 > Ahg497410 jgi|Araly1|497410|fgenesh2_kg.371__1__AT2G45900.1 Length=1842 Score = 1319 bits (714), Expect = 0.0 Identities = 950/1055 (90%), Gaps = 52/1055 (5%) Strand=Plus/Plus Query 86 ATGGTGGATCTAACCAGAAGCTTTTGATGGATAAGAAACGTCGAAGCAAGA-GAATCATC 144 ||||||||||||||||||||||||||||||||||||||||| ||||||| | | | ||| Sbjct 53 ATGGTGGATCTAACCAGAAGCTTTTGATGGATAAGAAACGTGGAAGCAA-ACG-A--ATC 108 Query 145 ATAGGTAATAATGGAGTGTTTGAGACTAAGGTTGAGAAGCAGCTTACTTGTGACTGTGAC 204 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 109 ATAGGTAATAATGGAATGTTTGACACTAAGGTTGAGAAGCAGCTTACTTGTGACTGTGAC 168 Query 205 TGTGA---TGAGGAGAGTGAAGCTGAAATGCAGAGTGTCAAGAAACTCATAGAAGCTGAG 261 | ||| |||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct 169 TATGACTGTGAGGAGAGTGAAGCTGATATGCAGAGTGTCAAGAAACTCATAGAAGATGAG 228 Query 262 ATTGATGAGAAGACTACGCAAAAGTGTGAGGCGAGAAACCGAAAGAGGAGAAGTAGGACC 321 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 229 ATTGATGAGAAGACTAAGCAAAAGTGTGAGGCGAGAAACCGAAAGAGGAGAAGTAGGACC 288 Query 322 TGCAGCAAAATCAGTGAAGATATCAATGTTTTGATTGCTGGTGATGATGATGATGATCAT 381 |||| ||||| |||||| ||||||||||||||||||| |||||||||||||||| ||| Sbjct 289 TGCATCAAAACCAGTGAGGATATCAATGTTTTGATTGTTGGTGATGATGATGAT---CAT 345 Query 382 GCAGAGAAATCAGATAATGAGTGTCCGATAGTTTCTCATAACGAAGTGGATATGGTAAAT 441 ||||||||| ||| | || ||||||||| | ||||||| || ||||||| | |||||||| Sbjct 346 GCAGAGAAAGCAGGTGATCAGTGTCCGAGAATTTCTCAGAATGAAGTGGGTTTGGTAAAT 405 Query 442 GATGATTCCGAAGAGAAGTTCAGCGAGTTGATAAAGCGGTTGATAGCTCAAAAGGAAAGC 501 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 406 GATGATTCCGAAGAGAAGTTCAGCGAGTTGATAAAGCGGTTGATAGCTCAAAAGGAAAGT 465 Query 502 GAGGTAGAGAGCTGCAAGAAGAACCTGGTGGATGCATTTCAGGTCTTGGATTCTAAAGAA 561 |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 466 GAGGCAGGGAGCTGCAAGAAGAACATGGTGGATGCATTTCAGGTCTTGGATTCTAAAGAA 525 Query 562 GAATCATT---GAATATCGGTACACCAACTTCGGGAGATTCTCAGAGAATCAAAGAG--- 615 |||||||| |||||||||||| |||| ||| ||||||||||||||||||| ||| Sbjct 526 GAATCATTCTTGAATATCGGTACGCCAATTTCAAGAGATTCTCAGAGAATCAATGAGCTG 585 Query 616 ACACAA---A--CAA----TTGTAATTTTGAAGCCTGAACCAAATACCTTGGATGTTGGA 666 |||||| | ||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 586 ACACAATGTAGACAAACAATTGTAATTTTGAAGCCTGAACCAAATAGCTTGGATGTTGGA 645 Query 667 TCATCGCCTGGAACACCTTCTACAGACAACAAGGCCAAAAATGAGAAATTCAGTTCTCGC 726 ||||| ||||||||||||||||||||||||||| ||||||||| || |||||||||||| Sbjct 646 TCATCACCTGGAACACCTTCTACAGACAACAAGACCAAAAATGGGAGGTTCAGTTCTCGC 705 Query 727 TTTAGTCTCAGTAGAATCAGAAGAAGACTAAAGTTTGCGGTTGGAAAGAATCCATGCAAT 786 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 706 TTTATTCTCAGTAGAATCAGAAGAAGACTAAAGTTTGCTGTTGGAAAGAATCCATGCAAT 765 Query 787 GCTCAACATGACTCTGATCCTGATCCTGATGCAGATGCATTGTCGTCTAGCATGAGTCAA 846 |||||||| ||||||||||||||||| | | | |||||||||||||| |||||||||| Sbjct 766 GCTCAACAGGACTCTGATCCTGATCC--A-G-A--TGCATTGTCGTCTAACATGAGTCAA 819 Query 847 AACTGTTGTTTGGGAGAAGAGATAGAGACCAATCCCGGG-----T----CGGATGGAGAA 897 ||||||||||||||||||| ||||||||| ||||||||| | ||||||||||| Sbjct 820 AACTGTTGTTTGGGAGAAGCGATAGAGACTAATCCCGGGAAGGGTGTTTCGGATGGAGAA 879 Query 898 ATC-TTGCCTGACATTGCTTCAAAAGGTGAGGCTAATAAAGAGGATACTTTCCATGAAAG 956 | | ||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||||| Sbjct 880 A-CATTGCCTGACATTGCTTCAAAACGTGAGGCTAATAAGGAGGACACTATCCATGAAAG 938 Query 957 TGAAAAAGATTCCAAGAAGAGTATGTGTGGCATATACATTGCTGCCAAGAAACACCTGTC 1016 |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 939 TGAA---GATTCCAAGAAGAGTATGTGTGGTATATACATTGCCGCCAAGAAACACCTGTC 995 Query 1017 TGAAATGCTTGCAGAAGGAGACATAGATGCTGACTT-ACCGGATAAAGAAGTACCAAGAA 1075 |||||||||||||||| ||||| |||||||| || ||||||||||||||||||||||| Sbjct 996 TGAAATGCTTGCAGAAAGAGAC---GATGCTGA-TTCACCGGATAAAGAAGTACCAAGAA 1051 Query 1076 TCCTTGGGAAGATTCTTGCTCTCCCTGAGTTCTTC 1110 | ||||||||||||||| ||| |||||| | |||| Sbjct 1052 TTCTTGGGAAGATTCTTTCTCCCCCTGACT-CTTC 1085 Score = 909 bits (492), Expect = 0.0 Identities = 545/571 (95%), Gaps = 2/571 (0%) Strand=Plus/Plus Query 1326 CTCTTCCATTATCCAACAAGATGCATATATTGATGAGGATGAGCACAAACAACTTTTGGA 1385 |||||||||||||||||||||||||||| |||||||||||||||| || ||||| ||||| Sbjct 1080 CTCTTCCATTATCCAACAAGATGCATATGTTGATGAGGATGAGCAGAAGCAACTCTTGGA 1139 Query 1386 AAAGGAAGTACTCAAAGAGGGACAATCACCGTGTTCTCCACCAAACTCTTCAGTGAGAAT 1445 |||||||| |||| | ||||| |||| ||||||||||||||||||||||||| ||||||| Sbjct 1140 AAAGGAAGGACTCGACGAGGGGCAATTACCGTGTTCTCCACCAAACTCTTCAATGAGAAT 1199 Query 1446 GTCTGAATGCCAAGAAAACACCACAGATGTAT-TGGGAAAGTCAAGTCCTGTATCTGTGC 1504 |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| Sbjct 1200 GTCTGAATGCCAAGAAAATACCACAGATGT-TCTGGGAAAGTCAAGTCCTGTATCTGTGC 1258 Query 1505 TTGAGCCTTTCTTTACAGATGATGACACTAGTCCAAACAGCTCCAGGTTCTCTTCAGCCG 1564 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 TTGAGCCTCTCTTTACAGATGATGACACTAGTCCAAACAGCTCCAGGTTCTCTTCAGCCG 1318 Query 1565 AAATGCGGATGCAACCACTGTGCATAAGATTCGACGAACCTGATTTTCCAGGACCGGAGA 1624 || ||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| Sbjct 1319 AAGTGCGGATGCAACCACTGTGCATAAGATTCGACGAAGCTGATTCTCCAAGACCGGAGA 1378 Query 1625 AAGACAATGATGTCAAAACAAGAATGGACGACAAGGAACTGGCACTTGAATACATTCAAG 1684 |||||||||||| |||||| |||||||| ||||| ||| ||||||||||||||||||||| Sbjct 1379 AAGACAATGATGCCAAAACTAGAATGGATGACAAAGAATTGGCACTTGAATACATTCAAG 1438 Query 1685 CCGTGGTGAAATCATCAGAGTTGAACTGGGAAGAGCTTTTGGCGAGATCTTTTTATTCGG 1744 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1439 CCGTGGTGAAATCCTCAGAGTTGAACTGGGAAGAGCTTTTGGCGAGATCTTTTTATTCGG 1498 Query 1745 AGAAGATTCTTGAGCAGGCTCTAATGGATGACATAGATTTCTGTTCGACAAATCTCTGCA 1804 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1499 AGAAGATTCTTGAGCAGGCTCTAATGGATGACATAGATTTCTGTTCGACAAATCTATGCA 1558 Query 1805 GCGATAAGAAACTCCTTTTTGACTGTATCAATGAAGTTCTTATGGAGTTTTGTGGACATG 1864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1559 GCGATAAGAAACTCCTTTTTGACTGTATCAATGAAGTTCTTATGGAGTTTTGTGGACATG 1618 Query 1865 GCCCTTGGATTTCATTCGTCAAACCTGCAAT 1895 |||||||||||||||||||||||||| |||| Sbjct 1619 GCCCTTGGATTTCATTCGTCAAACCTTCAAT 1649 Score = 211 bits (114), Expect = 2e-53 Identities = 127/133 (95%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1939 GAAGAAGTTTACTGGCATCTCTTACCTTTGCCATCTCCTCACACACTAGACCAGATAGTG 1998 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 1652 GAAGAAGTTTACTGGCATCTCTTACCTTTGACTTCTCCTCACACACTAGACCAGATAGTG 1711 Query 1999 CGGAAAGACCTGGCTAGGACTGGAAACTGGATGGATCTCCGCTTTGATATTGGTTGCATC 2058 | ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1712 CAGAAAGAC-TGGCTAGGACTGGAAACTGGATGGA-CTCCGCTTTGATATTGGTTGCATC 1769 Query 2059 GTTTCTGAAACAG 2071 | ||||||||||| Sbjct 1770 GGTTCTGAAACAG 1782 Score = 86.1 bits (46), Expect = 1e-15 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 1 ATGGAGAAAGAGATTTGTAGAAGACATCTTTCAAGAGAAGGGCTAGGAT 49 |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1 ATGGAGAAAGAGATTTGTAGAAGACATCTTTCAAGAGAAGGGATAGGAT 49 > Ahg907815 jgi|Araly1|907815|Al_scaffold_0002_896 Length=492 Score = 193 bits (104), Expect = 6e-48 Identities = 122/130 (94%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 70 ATGTTTGATTTTAGACATGGTGGATCTAACCAGAAGCTTTTGATGGATAAGAAACGTCGA 129 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1 ATGTTTGACTTCAGACATGGTGGATCTAACCAGAAGCTTTTGATGGATAAGAAACGTGGA 60 Query 130 AGCAAGAGAATCATCATAGGTAATAATGGAGTGTTTGAGACTAAGGTTGAGAAGCAGCTT 189 ||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 61 AGCAAAAG-A--ATCATAGGTAATAATGGAATGTTTGAGACTAAGGTTGAGAAGCAGCTT 117 Query 190 ACTTGTGACT 199 |||||||||| Sbjct 118 ACTTGTGACT 127 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 81398853565 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5