BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G45960.3
Length=1299
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483737 jgi|Araly1|483737|fgenesh2_kg.4__2797__AT2G45960.1 1975 0.0
Ahg486618 jgi|Araly1|486618|fgenesh2_kg.5__2610__AT3G61430.2 1013 0.0
Ahg470115 jgi|Araly1|470115|fgenesh2_kg.1__69__AT1G01620.1 739 0.0
Ahg491143 jgi|Araly1|491143|fgenesh2_kg.7__576__AT4G35100.1 320 2e-86
> Ahg483737 jgi|Araly1|483737|fgenesh2_kg.4__2797__AT2G45960.1
Length=1270
Score = 1975 bits (1069), Expect = 0.0
Identities = 1210/1276 (95%), Gaps = 18/1276 (1%)
Strand=Plus/Plus
Query 20 TTTTAATTTTGTTTCCATCATCTTCCAACCTTGAGTTTCGGTCACTATAAAAAGCCACCA 79
||| |||||| ||||||| |||||||||| ||||||||| ||||||||||||| ||||||
Sbjct 1 TTTAAATTTTATTTCCATTATCTTCCAACATTGAGTTTCTGTCACTATAAAAAACCACCA 60
Query 80 CTCTCTCTGCTTCTCTGCAACACATAACCCACTCAC--AG------AAAAACCTAGAAAG 131
|||||||| ||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 61 CTCTCTCTTCTTCTCTGCAACACATAACCCACTCACAGAGAAACCCAAAAACCTAGAAAG 120
Query 132 CTCTagagagaaagagagagagagaTGGAAGGTAAAGAAGAAGATGTTAGAGTCGGAGCT 191
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CTCTAGAGAGAAAAAGAGAGAGAGATGGAAGGTAAAGAAGAAGATGTTAGAGTCGGAGCT 180
Query 192 AACAAGTTTCCGGAGAGGCAACCGATCGGAACTTCGGCTCAGAGTGACAAGGACTACAAA 251
||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||
Sbjct 181 AACAAGTTTCCGGAGAGGCAACCTATCGGAACTTCTGCTCAGAGCGACAAGGACTACAAG 240
Query 252 GAGCCACCACCTGCGCCGTTGTTCGAGCCCGGCGAGCTAGCTTCATGGTCCTTCTGGAGA 311
|||||||||||||||||||||||||||||||||||| | ||||| ||||| |||||||||
Sbjct 241 GAGCCACCACCTGCGCCGTTGTTCGAGCCCGGCGAGATTGCTTCGTGGTCATTCTGGAGA 300
Query 312 GCTGGGATTGCTGAGTTTATAGCTACGTTTTTGTTCCTGTACATCACTGTTTTGACTGTT 371
||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 301 GCTGGAATCGCTGAGTTCATCGCTACGTTTTTGTTCCTGTACATCACTGTTTTGACTGTT 360
Query 372 ATGGGTGTGAAGAGGTCACCGAACATGTGTGCTTCCGTCGGAATCCAAGGTATCGCTTGG 431
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 361 ATGGGTGTGAAGAGGTCACCGAACATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGG 420
Query 432 GCTTTCGGTGGTATGATCTTCGCTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACAC 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 GCTTTCGGTGGTATGATCTTCGCTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACAC 480
Query 492 ATCAACCCAGCGGTTACGTTCGGTTTGTTCTTAGCTAGGAAGCTTTCGCTCACACGAGCT 551
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 481 ATCAACCCAGCGGTTACGTTCGGTTTGTTCTTAGCCAGGAAGCTTTCGCTCACACGAGCT 540
Query 552 GTGTACTACATAGTGATGCAGTGCTTAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGG 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GTGTACTACATAGTGATGCAGTGCTTAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGG 600
Query 612 TTCCAGCCAAAGCAATACCAGGCTTTGGGAGGTGGAGCCAACACCATAGCTCATGGCTAC 671
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 601 TTCCAACCAAAGCAATACCAGGCTTTGGGAGGTGGAGCCAACACCATAGCTCATGGTTAC 660
Query 672 ACCAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTC 731
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 ACAAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTC 720
Query 732 TTCTCTGCCACTGATGCCAAGAGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCG 791
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 TTCTCAGCCACTGATGCCAAGAGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCG 780
Query 792 CTCCCTATCGGATTCGCTGTGTTCTTGGTTCACTTAGCAACCATCCCCATTACTGGAACT 851
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 781 CTCCCAATCGGATTCGCTGTGTTCTTGGTTCACTTAGCAACCATCCCCATCACTGGAACC 840
Query 852 GGAATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATCTTCAACAAGGACAACGCTTGG 911
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 841 GGAATCAACCCAGCAAGAAGTCTTGGAGCTGCAATCATTTTCAACAAGGACAACGCCTGG 900
Query 912 GATGACCACGTGATGGGTCTTTTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCT 971
|| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 GACGACCA--T--TGGGTCTTTTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCT 956
Query 972 CTACCACGTTATAGTCATCAGAGCCATCCCATTCAAGTCCAGAAGCTAAAGCTGATTGAG 1031
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 957 CTACCACGTTATAGTCATCAGAGCCATCCCATTCAAGTCCAGAAGCTAA-GCTGATTGAG 1015
Query 1032 TTCT-ATTTAAAATCTGGCTTTTGTTCTTAGTTTGCTTTCTTTTGTGAATCTACTACCTG 1090
|||| |||| |||||||||||| |||||||||||||||| |||||||||||| |||||||
Sbjct 1016 TTCTTATTTTAAATCTGGCTTTCGTTCTTAGTTTGCTTTTTTTTGTGAATCTGCTACCTG 1075
Query 1091 TGTGTAACGTGTGTATCTGTTGT-C-C-TCTTCTTTGCCTAATGGAGACTTATGTAAAAC 1147
|||| |||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct 1076 TGTGCGCCGTGTGTATCTGTTGTTCTCCTCTTCTTTGCCTAATGGAGACTTATGTAAAAC 1135
Query 1148 AAAGACATGCCCCAGAAACATCTGTTATCTTTCTTCTCCATTTTATCAGAGGATTTCTAT 1207
||||| || |||||||||||||||| || |||||||||||||| |||| |||||||||||
Sbjct 1136 AAAGATATTCCCCAGAAACATCTGTAATATTTCTTCTCCATTT-ATCAAAGGATTTCTAT 1194
Query 1208 AATTGGCCCATTCTGGGTTTATCTCAAGCAGGCAACTTATCTTGAATCAAAGTGGACCAG 1267
||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 1195 AATTGGCACATTCTGGGTTTTTCTCAAGCAGGCAACTTATCTCGAATCAAAGTGGACCAA 1254
Query 1268 ACATATTTAATGCATT 1283
||||||||||||||||
Sbjct 1255 ACATATTTAATGCATT 1270
> Ahg486618 jgi|Araly1|486618|fgenesh2_kg.5__2610__AT3G61430.2
Length=1227
Score = 1013 bits (548), Expect = 0.0
Identities = 763/868 (88%), Gaps = 10/868 (1%)
Strand=Plus/Plus
Query 156 ATGGAAGGTAAAGAAGAAGATGTTAGAGTCGGAGCTAACAAGTTTCCGGAGAGGCAACCG 215
|||||||| ||||||||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct 178 ATGGAAGGCAAAGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGGAGAGACAACCA 237
Query 216 ATCGGAACTTCGGCTCAGAGTGACAAGGACTACAAAGAGCCACCACCTGCGCCGTTGTTC 275
|||||||| || |||||||| |||||||||||||| || |||||||| || ||||| |||
Sbjct 238 ATCGGAACATCAGCTCAGAGCGACAAGGACTACAATGAACCACCACCGGCTCCGTTTTTC 297
Query 276 GAGCCCGGCGAGCTAGCTTCATGGTCCTTCTGGAGAGCTGGGATTGCTGAGTTTATAGCT 335
||||| || ||||| ||||||||||||| |||||||||||||| |||||||| || |||
Sbjct 298 GAGCCTGGTGAGCTTTCTTCATGGTCCTTTTGGAGAGCTGGGATCGCTGAGTTCATCGCT 357
Query 336 ACGTTT-TTGTTCCTGTACATCACTGTTTTGACTGTTATGGGTGTGAAGAGGTCACCGAA 394
|| ||| | ||||| |||||||||||||||||||||||||| || || |||||||||||
Sbjct 358 AC-TTTCCTCTTCCTCTACATCACTGTTTTGACTGTTATGGGAGTTAAAAGGTCACCGAA 416
Query 395 CATGTGTGCTTCCGTCGGAATCCAAGGTATCGCTTGGGCTTTCGGTGGTATGATCTTCG- 453
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 417 TATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGGTATGATCTTTGC 476
Query 454 CTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCAGCGGTTACGTTCG 513
|| | ||||||||||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct 477 CT-TAGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCGGCGGTTACTTTTG 535
Query 514 GTTTGTTCTTAGCTAGGAAGCTTTCGCTCAC-ACGAGCTGTGTACTACATAGTGATGCAG 572
|| |||||||||| ||||||| ||||| || | ||||| ||||||||||||||||||||
Sbjct 536 GTCTGTTCTTAGCCCGGAAGCTGTCGCTTACCA-GAGCTCTGTACTACATAGTGATGCAG 594
Query 573 TGCTTAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGGTTCCAGCCAAAGCAATACCAG 632
||||| ||||| |||||||| ||||| |||||||| || |||||||| ||||||||||||
Sbjct 595 TGCTTGGGAGCCATCTGTGGTGCTGGCGTGGTCAAAGGATTCCAGCCTAAGCAATACCAG 654
Query 633 GCTTTGGGAGGTGGAGCCAACACCATAGCTCATGGCTACACCAAAGGAAGTGGTCTTGGA 692
||| | ||||| ||||| ||||| | |||||||| ||||||||||||||||||||||||
Sbjct 655 GCTCTAGGAGGAGGAGCTAACACTGTGGCTCATGGTTACACCAAAGGAAGTGGTCTTGGA 714
Query 693 GCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTCTTCTCTGCCACTGATGCCAAG 752
|||||||||||||| || ||||||||||| ||||| |||||||| || ||||| ||||||
Sbjct 715 GCTGAGATTATTGGCACTTTTGTCCTTGTATACACAGTCTTCTCAGCAACTGACGCCAAG 774
Query 753 AGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCGCTCCCTATCGGATTCGCTGTG 812
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| || || ||
Sbjct 775 AGAAACGCTCGTGACTCTCATGTCCCTATTCTTGCACCACTCCCAATCGGGTTTGCGGTT 834
Query 813 TTCTTGGTTCACTTAGCAACCATCCCCATTACTGGAACTGGAATCAACCCAGCAAGAAGT 872
|||||||||||||| ||||||||||| || ||||| || || ||||||||||| ||||||
Sbjct 835 TTCTTGGTTCACTTGGCAACCATCCCAATCACTGGCACAGGCATCAACCCAGCTAGAAGT 894
Query 873 CTTGGAGCTGCAATCATCTTCAACAAGGACAACGCTTGGGATGACCACGTGATGGGTCTT 932
||||||||||||||||||| |||||| ||| | | ||||| |||||| || || | ||
Sbjct 895 CTTGGAGCTGCAATCATCTACAACAAAGACCATTCATGGGACGACCAC-TG--GG-TGTT 950
Query 933 TTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCTCTACCACGTTATAGTCATCAG 992
|||||||||||| |||||||| ||||||||||||||||| ||||| || | ||||||||
Sbjct 951 TTGGGTTGGACCCTTCATTGGAGCTGCACTTGCTGCTCTTTACCATGTGGTTGTCATCAG 1010
Query 993 AGCCATCCCATTCAAGTCCAGAAGCTAA 1020
||||||||| ||||| ||||||||||||
Sbjct 1011 AGCCATCCCTTTCAAATCCAGAAGCTAA 1038
> Ahg470115 jgi|Araly1|470115|fgenesh2_kg.1__69__AT1G01620.1
Length=1065
Score = 739 bits (400), Expect = 0.0
Identities = 721/877 (82%), Gaps = 18/877 (2%)
Strand=Plus/Plus
Query 146 agagagagagaTGGAAGGTAAAGAAGAAGATGTTAGAGTCGGAGCTAACAAGTTTCCGGA 205
|||||||||||||||||| |||||||| |||||| |||| ||||| |||||||| || ||
Sbjct 78 AGAGAGAGAGATGGAAGGGAAAGAAGAGGATGTTCGAGTGGGAGCGAACAAGTTCCCAGA 137
Query 206 GAGGCAACCGATCGGAACTTCGGCTCAGA-GTGACAAGGACTACAAAGAGCCACCACCTG 264
||||||||| || || || |||||||||| | ||||| |||||||| ||||||||||| |
Sbjct 138 GAGGCAACCCATAGGGACGTCGGCTCAGACG-GACAAAGACTACAAGGAGCCACCACCAG 196
Query 265 CGCCGTTGTTCGAGCCCGGCGAGCT-AGCTTCATGGTCCTTCTGGAGAGCTGGGATTGCT 323
| || |||||||||| |||||||| || |||||||||||||| ||||| || || ||
Sbjct 197 CTCCACTGTTCGAGCCAGGCGAGCTGAG-TTCATGGTCCTTCTACAGAGCCGGAATCGCC 255
Query 324 GAGTTTATAGCTACGTTTTTGTTCCTGTACATCACTGTTTTGACTGTTATGGGTGTGAAG 383
||||| ||||| || || |||| || |||||||| || ||||| || ||||| ||||||
Sbjct 256 GAGTTCATAGCCACATTCCTGTTTCTATACATCACAGTATTGACAGTGATGGGAGTGAAG 315
Query 384 AG-GTCACCGAACATGTGTGCTTCCGTCGGAATCCAAGGTATCGCTTGGGCTTTCGGTGG 442
|| | |||| ||||||||||| || || ||||||||||| || ||||||||||| || ||
Sbjct 316 AGAG-CACCAAACATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTTGGGCTTTTGGAGG 374
Query 443 TATGATCTTCGCTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCAGC 502
|||||||| || || |||||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct 375 CATGATCTTTGCCCTTGTCTACTGTACTGCTGGAATCTCTGGTGGACACATAAACCCAGC 434
Query 503 GGTTACGTTCGGTTTGTTCTTAGCTAGGAAGCTTTCGCTCAC-ACGAGCTGTGTACTACA 561
||| || || ||| ||||||| ||| | || || || | || | ||||||| | |||||
Sbjct 435 GGTGACATTTGGTCTGTTCTTGGCTCGTAAACTGTCATTGACGA-GAGCTGTCTTCTACA 493
Query 562 TAGTGATGCAGTGCT-TAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGGTTCCAGCCA 620
| |||||||| || | | ||||| ||||| || || || || ||||| || |||||||||
Sbjct 494 TCGTGATGCAATG-TCTCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAGGCTTCCAGCCA 552
Query 621 AAGCAATACCAGGCTTTGGGAGGTGGAGCCAACACCATAGCTCATGGCTACACCAAAGGA 680
|| | ||||| || | || || |||||||||||| | ||||| |||||||| || ||
Sbjct 553 AATCCTTACCAAACTCTCGGCGGAGGAGCCAACACCGTCGCTCACGGCTACACTAAGGGC 612
Query 681 AGTGGTCTT-GGAGCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTCTTCTCTGC 739
|||| || || |||||||| || |||||||| |||||||| ||||| |||||||| ||
Sbjct 613 TCTGGT-TTGGGCGCTGAGATCATCGGAACCTTCGTCCTTGTCTACACGGTCTTCTCCGC 671
Query 740 CACTGATGCCAAGAGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCGCTCCCTAT 799
|||||| |||||||||| |||||||||||| || || || ||| | || || ||||| ||
Sbjct 672 CACTGACGCCAAGAGAAGCGCTCGTGACTCCCACGTGCCGATTTTGGCTCCACTCCCAAT 731
Query 800 CGGATTCGCTGTGTTCTTGGTTCACTTAGCAACCATCCCCATTACTGGAACTGGAATCAA 859
||||||||||||||||||||||||||| || || || || || || ||||| ||||||||
Sbjct 732 CGGATTCGCTGTGTTCTTGGTTCACTTGGCGACGATTCCGATAACCGGAACCGGAATCAA 791
Query 860 CCCAGCAAGAAGTCTTGGAGCTGCAATCATCTTCAACAAGGACAACGCTTGGGATGACCA 919
||||||||| |||||||||||||||||||||| |||||||||| |||||||||| |||||
Sbjct 792 CCCAGCAAGGAGTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTTGGGACGACCA 851
Query 920 CGTGATGGGTCTTTTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCTCTACCACG 979
| || | | || ||||| |||||||||||||| || || ||||| ||||| ||||||
Sbjct 852 C-TG--GA-TATTCTGGGTAGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTTACCACC 907
Query 980 TTA-TAGTCATCAGAGCCATCCCATTCAAGTCCAGAA 1015
| | |||||||||||||| ||||||||||||||||
Sbjct 908 A-ACTTGTCATCAGAGCCATTCCATTCAAGTCCAGAA 943
> Ahg491143 jgi|Araly1|491143|fgenesh2_kg.7__576__AT4G35100.1
Length=1045
Score = 320 bits (173), Expect = 2e-86
Identities = 438/561 (78%), Gaps = 37/561 (7%)
Strand=Plus/Plus
Query 423 ATCGCTTGGGCTTTCGGTGGTATGATCTTCGCTC-TCGTCTACTGCACCGCTGGTATCTC 481
||||||||||||||||||||||||||||||| || |||| ||||||||||| ||||||||
Sbjct 300 ATCGCTTGGGCTTTCGGTGGTATGATCTTCG-TCCTCGTTTACTGCACCGCCGGTATCTC 358
Query 482 CGGTGGACACATCAACCCAGCGGTTACGTTCGGTTTGTTCTTAGCTAGGAAG--CT-TTC 538
||||| ||||| |||||||| || || |||||| | |||||||| | ||| || ||
Sbjct 359 TGGTGGTCACATTAACCCAGCTGTGACTTTCGGTCTATTCTTAGCCCGTAAGGTCTCTTT 418
Query 539 GCTCACACGAGCTGTGTACT-ACAT-AGT-GATGCAGTG-CTTAGGAGCTATCTGTGGAG 594
| | | ||||| | | | |||| | | | | ||||| ||| ||||| || ||||| |
Sbjct 419 GGTGA---GAGCTCT-TGGTTACATGA-TAGCT-CAGTGTCTT-GGAGCCATTTGTGGTG 471
Query 595 CTGG-TGTGGTCAAGGGGTTCCA-GCCAAAG-CAATACCAGGCT-TTGGGAGGTGGAGCC 650
||| | | || || | ||| | | ||| | ||| | || |||| || |||||
Sbjct 472 -TGGGTTTCGTGAAAGCTTTC-ATGA-AAACTCCTTACAACACTCTTGGT-GGAGGAGCT 527
Query 651 AACACCATAGCTCATGGCTACACCAAAGGAAGTGGTCTTGGAGCTGAGATTATTGGAACC 710
|||||| ||||| | ||||||| |||||||| || ||| |||||||||||||| |||||
Sbjct 528 AACACCGTAGCTGACGGCTACAGCAAAGGAACTGCTCTCGGAGCTGAGATTATCGGAAC- 586
Query 711 TTT-GTCCTTGTTTACACCGTCTTCTCTGCCACTGATGCC-AAGAGAAACGCTCGTGACT 768
||| ||||||||||||||||| |||||||| ||||| || ||||||| |||||||||||
Sbjct 587 TTTCGTCCTTGTTTACACCGTTTTCTCTGCAACTGAC-CCTAAGAGAAGCGCTCGTGACT 645
Query 769 CTCATGTTCCTATTCTAGCACCGCTCCCTATCGGATTCGCTGTGTTCTTGGTTCACTTAG 828
|||| | || || | || || || || || ||||| ||||||||| |||| || || |
Sbjct 646 CTCACATCCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTGCATTTGG 705
Query 829 CAACCATCCCCATTACTGGAACTGGAATCAACCCAGCAAGAAGTCTT-GGAGCTGCAATC 887
| || ||||||||||| |||||||| ||||||||||||||||| ||| || ||||| |
Sbjct 706 CTACTATCCCCATTACCGGAACTGGTATCAACCCAGCAAGAAG-CTTTGGTGCTGCTGTT 764
Query 888 ATCTTCAACAAGGACAACGCTTGGGATGACCACGTGATGGGTCTTTTGGGTTGGACCATT 947
|||| |||||| || || || ||||||||||| |||| ||||||||||||| || ||
Sbjct 765 ATCTACAACAACGAGAAGGCGTGGGATGACCA----ATGGATCTTTTGGGTTGGTCCGTT 820
Query 948 CATTGGTGCTGCACTTGCTGC 968
| |||| | ||||| |||||
Sbjct 821 C-TTGG-GA-GCACTAGCTGC 838
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 48568596258
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5