BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G46180.1
Length=2391
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483764 jgi|Araly1|483764|fgenesh2_kg.4__2824__AT2G46180.1 3690 0.0
Ahg939210 jgi|Araly1|939210|scaffold_503401.1 1500 0.0
> Ahg483764 jgi|Araly1|483764|fgenesh2_kg.4__2824__AT2G46180.1
Length=2386
Score = 3690 bits (1998), Expect = 0.0
Identities = 2265/2393 (95%), Gaps = 22/2393 (1%)
Strand=Plus/Plus
Query 2 CGATAATAATCTTACAGAGGAAGATTCTTGTCTCTTTGATAAATTCTCGGAGTAGGAGGA 61
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1 CGATAATAATCTTACAGAGGAAGATTCTTGTCCCTTTGATAAATTCTCGGAGT---AGGA 57
Query 62 ATCTCTGACTC----C---TTCGGGCGAGTTGAGCTATGTGGAGTTCGGTTGCCAATTTG 114
|||||||||| | ||| |||||||||||||||||||||||||||||||||||
Sbjct 58 TTCTCTGACTCTGTTCGTTTTCTTACGAGTTGAGCTATGTGGAGTTCGGTTGCCAATTTG 117
Query 115 AAGGAGAATTTGAACAAGATTGCGCACGATGTGCATGACGACGACGAAGATGATGATGAA 174
|||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||
Sbjct 118 AAGGAGAATTTGAACAAGATCGCCCACGATGTGCACGACGACGACGAAGATGATGATGAA 177
Query 175 GATCTCACCATTTATGGGTCCACCAATGGCGGCACTGATCGGAGGAATTCTAATGGCTTT 234
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 178 GATCTCACCATTTATGGGTCCACCAATGGCGGCGCTGATCGGAGGAATTCTAATGGATTT 237
Query 235 AGGTATTCGAGGTCTCCAATGGCCAATGGTTTCGAATCGCCTGTTAATCCTGAGATTGAG 294
|||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||
Sbjct 238 AGGTATTCGAGGTCTCCAATGGCCAATGGTGTCGAATCGCCTATTAATCATGAGATTGAG 297
Query 295 AGATATAAAGCAGAGATCAACAAGCTTCAAAAATCAGAATCAGAAATCAAAGCTCTTTCA 354
||||||||||| |||||||||||||||||| |||||||| |||||||||||||||| |||
Sbjct 298 AGATATAAAGCGGAGATCAACAAGCTTCAAGAATCAGAAGCAGAAATCAAAGCTCTCTCA 357
Query 355 GTAAATTATGCGGCTCTACTAAAAGAGAAAGAGGATCAGATTTCCAGATTGAACCAGGAG 414
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 358 GTAAATTATGCGGCTCTTTTAAAAGAAAAAGAGGATCAGATTTCCAGATTGAACCAGGAG 417
Query 415 AATGGCTCCTTGAAACAGAATTTGACTTCAACTAATGCCGCTCTTAAAGAGTCTAGATTG 474
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 418 AATGGCTCGTTGAAACAGAATTTGACTTCAACTAATGCCGCTCTTAAAGAGTCTAGAATG 477
Query 475 GATCTTTCGAGGGCATCGAACAATAATGCTATCAAGGGAAATGGTGATCATTCACCCAAC 534
|||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 478 GATCTTTCCAGGGCATCAAACAATAATGCTATCAAGGGAAACGGTGATCATTCACCCAAC 537
Query 535 AGGTCACAAAGATCCCCAACTAATTGGAAAAATCGAAACCAAATGAACAATGGCATTGCC 594
|||||||||| ||| || ||||||||||||| |||||||||||| ||||||||||||||
Sbjct 538 AGGTCACAAAAATCTCCGACTAATTGGAAAAGCCGAAACCAAATGTACAATGGCATTGCC 597
Query 595 TCGAAACCAAACGGGACAGAGAATGATTCCGAGTCGCATAAAAAAGAAAAGGAGTTTGCA 654
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 TCAAAACAAAACGGGACAGAGAATGATTCCGAGTCGCATAAAAAAGAAAAGGAGTTTGCA 657
Query 655 GAGATGCTTGAAGAGAGAACCAGATCAATGGCATCTGCTCAGGCTAGAGAACTTGAGAAA 714
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 658 GATATGCTTGAAGAGAGAACCAGGTCAATGGCATCTGCTCAGGCTAGAGAACTTGAGAAA 717
Query 715 GAGCGAGAAAAATCAGCAAATCTGCAGATTTTACTACAGGAGGAGCGGAAACAAAATGAG 774
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 718 GAGCGAGAAAAATCAGCAAATCTGCAGATTTCACTACAGGAGGAGCGGAAACAAAATGAC 777
Query 775 ACTTTCAAGGAGGAACTCCAGTCTCTGAGGTTAGATAAGGAAAAAACACTCATGGAGAGT 834
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 778 TCTTTCAAGGAGGAACTCCAGTTTCTGAGGTTAGATAAGGAAAAAACACTCATGGAGAGT 837
Query 835 AACAAAGTACGTCGTGAATTGGATGCAAAATTGGCTGAAATCAGACAATTGCAGATGAAG 894
||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 838 AACAAAGTACGTCATGAATTGGATGCAAAATTGGCTGAAATCAAACAACTGCAGATGAAG 897
Query 895 TTGAATGGTGGGGAGCAGCATGCTTTTGGAATTTCCAGAGAAAATCTAAAAGAGGTTAAC 954
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 898 TTGAATGGTGGGGAGCAGCATG---TTGGAATTTCCATAGAAAATCTAAAAGAGGTTAAC 954
Query 955 AAAGCTCTGGAGAAGGAAAATAATGAGCTTAAGTTGAAACGAAGTGAATTAGAGGCTGCT 1014
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 AAAGCTCTGGAGAAAGAAAATAATGAGCTTAAGTTGAAACGAAGTGAATTAGAGGCTGCT 1014
Query 1015 TTGGAAGCAAGCCAGAAGTCAACAAGTAGGAAACTCTTCCCAAAGAGCACAGAGGATCTT 1074
|||||||||||||||| ||||||||||||||||||||||||| || | ||||||| ||||
Sbjct 1015 TTGGAAGCAAGCCAGAGGTCAACAAGTAGGAAACTCTTCCCAGAGGGAACAGAGGCTCTT 1074
Query 1075 AGTAGACACCTTAGTAGTTTGGACGAGGAGAAGGCCGGAACCTTCCCTGGGAAAGAAGAT 1134
|||||||| | ||||||||||||| |||| ||| ||| || |||||||||||||||||||
Sbjct 1075 AGTAGACATCGTAGTAGTTTGGACAAGGAAAAGCCCGAAAGCTTCCCTGGGAAAGAAGAT 1134
Query 1135 ATGGAAAAATCTTTGCAGAGGCTGGAAAAGGAGTTGGAGGAAGCACGAAGAGAAAAGGAT 1194
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1135 TTGGAGAAATCTTTGCAGAGGCTGGAAAGGGAGTTGGAGGAAGCACGAAGAGAAAAGGAT 1194
Query 1195 AAGGCACGGCAAGAACTAAAGCGGCTCAAACAACACCTGTTAGAAAAGGAAACCGAGGAG 1254
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1195 AAGGCACGGCAAGAACTAAAACGGCTCAAACAACACCTGTTAGAAAAGGAAACTGAGGAG 1254
Query 1255 TCTGAGAAAATGGATGAAGATAGTAGATTGATTGACGAGCTCCGCCAGACGAATGAATAT 1314
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1255 TCTGAGAAAATGGATGAAGATAGTAGATTGATTGAAGAACTCCGCCAGACGAATGAATAT 1314
Query 1315 CAAAGGTCTCAGATACTAGGTTTAGAAAAAGCTCTTAGGCAGACAATGGCTAATCAGGAG 1374
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 CAGAGGTCTCAGATACTAGGTTTAGAAAAAGCTCTTAGGCAGACAATGGCTAATCAGGAG 1374
Query 1375 GAAATAAAGTCGAGCAGTGACCTTGAAATCCGGAAGTCCAAGGGTATAATTGAAGACTTA 1434
||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 GAAATAAAGTCTAGCAACGACCTTGAAATCCGGAAGTCCAAGGGTATAATTGAAGACTTA 1434
Query 1435 AATCAAAAGCTGGCGAATTGTTTGAGAACGATAGATTCCAAAAATGTGGAGCTTTTGAAT 1494
||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| |||
Sbjct 1435 AATCAAAAGCTTGCGAATTGTTTGAGAACAATAGATTCCAAAAATGTGGAACTTTTAAAT 1494
Query 1495 CTTCAAACTGCTCTTGGTCAGTACTACGCTGAAATTGAAGCTAAGGAACATTTTGAACGA 1554
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495 CTTCAAACTGCTCTTGGCCAGTACTACGCTGAAATTGAAGCTAAGGAACATTTTGAACGA 1554
Query 1555 GAGCTTGCAGTGGCTAAAGAAGATGCAATGAAACTCTCAGCTCGTTTGAAAGATGTTGAT 1614
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAGCTTGCAGTGGCTAAAGAAGAGGCAATGAAACTCTCAGCTCGTTTGAAAGATGTTGAT 1614
Query 1615 GAACAGTTAGAGTCATCAAAGAAAGAAAAGGAGGAAATCACATCGAAGGTATTGCACGCA 1674
|||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1615 GAACGGTTAGAGTCATCAAAGAAAGAAAAGGAGGAAATCACATCGAAGCTGTTGCACGCA 1674
Query 1675 GAAAATATTGCAGCAGAATGGAAAAACAGAGTAAGCAAGGTTGAAGATGACAATGCAAAA 1734
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1675 GAAAATATTGCAGCAGAATGGAAAAACAGAGTAAGCAAGGTTGAAGAAGACAATGCAAAA 1734
Query 1735 GTAAGGCGTGTTCTTGAGCAGAGCATGACTAGGCTCAATAGAATGTCAATGGACTCTGAT 1794
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1735 GTAAGGCGTGTTCTTGAGCAGAGCATGACTAGGCTCAATAGAATGTCAATGGACTCCGAT 1794
Query 1795 TTTCTCGTTGATAGGCGTATTGTTATCAAGTTGCTGGTTACGTACTTCCAAAGGAATCAC 1854
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1795 TTTCTTGTTGATAGGCGTATTGTTATCAAGTTACTGGTTACGTACTTCCAAAGGAATCAC 1854
Query 1855 AGCAGAGAGGTGTTGGACCTAATGGTTCGAATGCTTGGATTCTCGGAGGAAGAAAAACAG 1914
||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1855 AGCAGAGAGGTGTTGGAGCTAATGGTTCGAATGCTTGGATTCTCAGAGGAAGACAAACAG 1914
Query 1915 CGAATAGGATTGGCACAACAAGGAGCGGCAGGTAAAGGTGTTGTTAGAGGTGTATTGGGT 1974
||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||
Sbjct 1915 CGAATAGGATTGGCACAGCAAGGAGCTGCAGGTAAAGGTGTTGTTAGAGGTGTGTTGGGC 1974
Query 1975 TTTCCGGGTCGCTTAGTCGGTGGCATCTTAGGCGGTGGCGGTGGC--TC--AC-CCG-AT 2028
|| ||||||||||||||||||||||||||||||||||| ||||| | || ||| ||
Sbjct 1975 TTCCCGGGTCGCTTAGTCGGTGGCATCTTAGGCGGTGGTGGTGGTGGTGGTACACCGGAT 2034
Query 2029 TCTCATCCAAATATGGCTTCAGATAATCAGTCTTTTGCAGACATGTGGGTCGAATTTCTA 2088
|||||||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 2035 TCTCATCCAAATATTGCGTCAGATAATCAGTCTTTCGCAGACATGTGGGTCGATTTTCTA 2094
Query 2089 CTTAaagacgcggaagagcgagagagaagagaagcagaagatgcagcaaacaaagagcaa 2148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2095 CTTAAAGACGCGGAAGAGCGAGAGAGAAGAGAAGCAGAAGATGCAGCAAACAAAGAGCAA 2154
Query 2149 gagaagGCTACTGTTTCTTCTACGCAGAGACCAAAGTATGAACAATCTGATTCGGAGTTT 2208
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2155 GAGAAGGCTACTGTTTCTTCTACGCAGAGACCAATGTATGAACAATCTGATTCGGAGTTT 2214
Query 2209 TCAACTGTGCCTCTTACATCATCGAATAGTAATCACAGGCTCTCTAGATTACTCACTTGA 2268
||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 2215 TCAACGGTGCCTCTTACATCATCGGATAGTAATCACAGGCTCTCCAGATTACTCACTTGA 2274
Query 2269 CTCGG-TTTGGTATATACATTT-ATACACGTTTTGTAGAAATCTAAAATCCGAAACTCTT 2326
|| || |||||||||||| ||| ||||||||||||||| |||||| |||||||| |||||
Sbjct 2275 CT-GGATTTGGTATATACTTTTTATACACGTTTTGTAGGAATCTATAATCCGAATCTCTT 2333
Query 2327 GCTTCTTGTGTTGTAATTATCTCTCTCACACCTATATTCTATTAATTCTTTTT 2379
|||||||||||||||||||||||||||||| |||||||| ||| |||||||||
Sbjct 2334 GCTTCTTGTGTTGTAATTATCTCTCTCACAACTATATTCCATTGATTCTTTTT 2386
> Ahg939210 jgi|Araly1|939210|scaffold_503401.1
Length=2174
Score = 1500 bits (812), Expect = 0.0
Identities = 1692/2100 (81%), Gaps = 128/2100 (6%)
Strand=Plus/Plus
Query 86 GAGCTATGTGGAGTTCGGTTGCCAATTTGAAGGAGAATTTGAACAAGATTGCGCACGATG 145
|||||||||||||||| ||| ||||| |||||||| ||| ||||||| |||| |||||
Sbjct 17 GAGCTATGTGGAGTTCAATTGAGAATTTCAAGGAGAACTTGCACAAGATCGCGCTCGATG 76
Query 146 TGCATGACGACGACGAAGATGATGATGAAGATCT-CACCATTTATGGGTCCACCAAT-G- 202
||||||| | ||||| || || || || ||||| || | || || | | ||||| |
Sbjct 77 TGCATGA--A-GACGATGACGAGGAAGACGATCTCCA-AAGCTACGGTTACGCCAATGGC 132
Query 203 G---CGGCA-CTGATCGGAGGAATTCTAATGGCTTT-AGGTATTCGAGGTCTC-CAATGG 256
| ||| | ||||||||||||| || ||| ||| |||| || ||||| | | ||
Sbjct 133 GTATCGGAATCTGATCGGAGGAACTCCGGTGG-TTTCAGGTCCTCCAGGTC-CGCGATCT 190
Query 257 CCAATGGTTTCGAATCGCCTGTTAATCCTGAGATTGAGAGATATAAAGCAGAGATCAACA 316
||||||| |||||||||||| | ||| |||||||||| | ||||| |||||||| || |
Sbjct 191 CCAATGGAATCGAATCGCCTGCTCATCATGAGATTGAGCGGTATAAGGCAGAGATTAAGA 250
Query 317 AGCTTCAAAAATCAGAATCAGAAATCAAAGCTCTT-TCAGTAAATTATGCGGCTCTACTA 375
||||||| |||| |||||||| |||||||| ||| ||||| |||||||| |||||| ||
Sbjct 251 AGCTTCAGGAATCCGAATCAGATATCAAAGC-CTTGTCAGTGAATTATGCAGCTCTATTA 309
Query 376 AAAGAGAAAGAGGATCAGATTTCCAGATTGAACCAGGAGAATGGCTCCTTGAAACAGA-A 434
| ||||||||||||||||||||| |||||||||||||| ||||| || |||||||| | |
Sbjct 310 AGAGAGAAAGAGGATCAGATTTCAAGATTGAACCAGGACAATGGTTCATTGAAACA-ATA 368
Query 435 TTTGACTTCAACTAATGCCGCTCTTAAAGAGTCTAGATTGGATC-TTTCGAGGGCATCGA 493
| |||| ||||||| |||||||||||||||| ||||| || | |||| |||| ||| |
Sbjct 369 TCTGACGTCAACTAGTGCCGCTCTTAAAGAGGCTAGAACCGA-CATTTCCAGGGGATCAA 427
Query 494 ACAATAATGCTATCAAGGGAAATGGTGATCATTCACCCAACAGGTCACAAAGATCCCCAA 553
|||| | |||||||||||||| |||||| |||||| | | | | | || | | |
Sbjct 428 ACAACCACGCTATCAAGGGAAACAATGATCAGTCACCC-A-A--T-A-ATAG-GCTAC-A 479
Query 554 CTAAT-TG-GAAAAATCGAAACCAAATGAACAATGGCAT-TGCCTCGAAA-CCAAACGGG 609
| ||| || | | || ||| || | | ||| ||| || || ||| ||| |||
Sbjct 480 CAAATCTGTGTCATATTTAAA--AAGTCCA-AAT--CATATG--TC-AAATGGAAAAGGG 531
Query 610 ACAGAGAATGATTCCGAGTCGCATAAAAAAGAAAAGGAGTTTGCAGAGATGCTTGAAGAG 669
| || | || | |||| ||| ||| ||| |||||||| ||||||| ||||| |||||
Sbjct 532 A-AG-G-AT-A--CCGATTCGTATATAAAGGAAAAGGACCTTGCAGATATGCTAGAAGAT 585
Query 670 AGAACCAGATCAATGGCATCTGCTCAGGCTA-GAGAACTTGAGAAAGAGCGAGAAAAA-T 727
||||||| |||||||||| ||| ||| |||| | ||||||| |||||||| |||||| |
Sbjct 586 AGAACCAAATCAATGGCAGCTGTTCAAGCTATG-GAACTTGCCAAAGAGCGTGAAAAATT 644
Query 728 CAGCAAATCTGCAGAT-TTTACTACAGGAGGAGCGGAAACA-AAATGAGA-CTTTCAAGG 784
|| | |||||||| | | | || ||||||||||||||| | | ||| | |||||||||
Sbjct 645 AAG-AGATCTGCAGCTATCT-CTGCAGGAGGAGCGGAAA-AGGAGTGA-ATCTTTCAAGG 700
Query 785 AGGAACTCCAGTCTCTGAGGTTAGATAAGGAA-AAAACAC-TCATGGAGAGTAACAAAGT 842
|||||||| |||| ||||||||||||| || ||||| | ||||||| | || |||| |
Sbjct 701 AGGAACTCGAGTCAATGAGGTTAGATAA-AAACAAAAC-CTTCATGGAAATTAGCAAAAT 758
Query 843 ACGTCGTGAATTGGATGCAAAATTGGC-TGAAATCAGACAATTGCAGATGAAGTTGAATG 901
||| ||||||||||||||||||| | |||||||| ||| |||||||||||||||||||
Sbjct 759 GCGTAGTGAATTGGATGCAAAATT-ACTTGAAATCAAACACTTGCAGATGAAGTTGAATG 817
Query 902 GTGGGGAGCAG-CATGCTTTTGGAATTTCCA-GAGAAAATCTAAAAGAGGTTAACAAAGC 959
|| |||| || |||||| |||||| | ||| | ||| |||||||||| |||||||||||
Sbjct 818 GTCGGGA-AAGCCATGCTATTGGAAATGCCATG-GAACATCTAAAAGAAGTTAACAAAGC 875
Query 960 TCTGGAGAAGGAAAATAATGAGCTTAAGTTGAAACGAAGTGAATTAGAGGCTGCTTTGGA 1019
||||||||| ||||| || ||||||||||||||||||||||| |||| |||||||| ||
Sbjct 876 TCTGGAGAATGAAAACAACGAGCTTAAGTTGAAACGAAGTGAGCTAGAAGCTGCTTTAGA 935
Query 1020 AGCAAGCCA-GAAGTCAACAAGTAGGAAACTCTTCCCAAAGA-G-CACAGAGGA-TCTTA 1075
|| ||| || |||| |||| ||||| ||| ||||||| || | |||||| || ||| |
Sbjct 936 AGAAAG-CAGGAAGCCAACCAGTAGCAAAGTCTTCCC--GGACGCCACAGA-GACTCTGA 991
Query 1076 GTAGACA-CCTTAGTAGTTTGGACGAGGAGAAGGCC-GGAACCTTCCCTGGGAAAGAAGA 1133
||| || || ||||| ||||||| ||||||| ||| | || ||| ||||| ||||||||
Sbjct 992 CTAGGCATCC-TAGTACTTTGGACAAGGAGAA-GCCTGAAAGCTTTCCTGGAAAAGAAGA 1049
Query 1134 TATGGAAAAATCTTTGCAGAGGCTGGAAAAGGAGTTGGAGGAAGCACGAAGAGAAAAG-G 1192
||||| |||| |||||||| |||||| ||| ||| ||||| ||||| ||| |||| |
Sbjct 1050 AATGGAGCAATCCCTGCAGAGGTTGGAAATGGATTTGAAGGAAACACGACGAG-AAAGAG 1108
Query 1193 ATAAGGCACGGCAAGAACTAAAGCGGCTCAAACAACACCTGTTAGAAAAGGAAACCGAGG 1252
||||||||||||||||| |||| ||||||||||| ||| || ||||||||||||| ||||
Sbjct 1109 ATAAGGCACGGCAAGAATTAAAACGGCTCAAACAGCACTTGCTAGAAAAGGAAACAGAGG 1168
Query 1253 AGTCTGAGAAAATGGATGAAGATAGTAGATTGATTGACGAGCTCCGCCAGACGAATGAAT 1312
||||||||||||||||||||||||| || ||||||| || ||||||||||| |||||||
Sbjct 1169 AGTCTGAGAAAATGGATGAAGATAGCCGACTGATTGAAGAACTCCGCCAGACTAATGAAT 1228
Query 1313 ATCAAAGGTCTCAGATACT-A-GGTTTAGA-AAAAGCTCTTAGGCAGACAATGGCTAATC 1369
||||||||||||||||| | | | || || ||||| ||||| |||| | || || ||||
Sbjct 1229 ATCAAAGGTCTCAGATA-TCACAG-TTGGAGAAAAG-TCTTAAGCAGGCCATCGCGAATC 1285
Query 1370 AGGAGGAAATAA-AG-TCGAGCAGTGACCTTGAAATCCGGAAGTCCAAGG-GTATAATTG 1426
|||||| |||| || | ||||| |||| ||||||| |||| |||| | | | |||
Sbjct 1286 AGGAGG--ATAACAGATTGAGCAATGACAACCAAATCCGAAAGTTAAAGGAG-ACAGTTG 1342
Query 1427 AAGACTTAAATCAAAAGCTGGCGAATTGTTTGAGAACGATAGATTCCAAAAATGTGGAGC 1486
||||| |||||||||| || | |||||||||||||| || || ||||| ||||| ||
Sbjct 1343 AAGACCTAAATCAAAAACTTACAAATTGTTTGAGAACAATCGAGTCCAAGAATGTTGAAA 1402
Query 1487 TTTTGAATCTTCAAACTGCTCTTGGTCAGTACTACGCTGAAATTGAAGCTAAGGAACATT 1546
|||| ||||||||||||||||| || ||||| ||||||||||| ||||||||||| ||||
Sbjct 1403 TTTTAAATCTTCAAACTGCTCTAGGCCAGTATTACGCTGAAATCGAAGCTAAGGAGCATT 1462
Query 1547 TTGAACGAGAGCT--TGCAGTGGCTAAAGA--AGATGCAATGAAACTCTCAGCTCGTTTG 1602
||||||||||||| || | |||||||||| || || ||||| || || |||||||||
Sbjct 1463 TTGAACGAGAGCTCGTG-A-TGGCTAAAGACGAGTTG--ATGAAGCTTTCTGCTCGTTTG 1518
Query 1603 AAAGATGT-TGATGAACAGTTAGAGTCATCAAAGAAAGAAAAGGAGGAAATCACATCGAA 1661
|||||| | |||||| | ||||||||||||||| ||||||||||| || ||||||| ||
Sbjct 1519 AAAGAT-TCTGATGAGCGGTTAGAGTCATCAAATAAAGAAAAGGAAGATGTCACATCCAA 1577
Query 1662 GGTATTGCACGCAGAAAATA-TTGCAGCAGAATGGAAAAACAGAGTAAGCAAGGTTGAAG 1720
| ||||| || ||||| | ||||||| |||||||||||||||||||||||||||||||
Sbjct 1578 ATTGTTGCATGCGGAAAA-AGTTGCAGCGGAATGGAAAAACAGAGTAAGCAAGGTTGAAG 1636
Query 1721 ATGACAATGCAAAAGTAAGGCGTGTTCTTGAGCAGAGCATGACTAGGCTCAATAGAATGT 1780
| ||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1637 AAGACAATGCAAAAGTACGACGTGTTCTTGAGCAGAGCATGACAAGGCTCAATAGAATGT 1696
Query 1781 CAATGGACTCTGATTTTCTCGTTGATAGGCGTATTGTTATCAAGTTGCTGGTTACGTACT 1840
||||||| || |||| ||| ||||||||||| || |||||||| |||||||| || || |
Sbjct 1697 CAATGGAGTCGGATTATCTTGTTGATAGGCGAATCGTTATCAAATTGCTGGTGACATATT 1756
Query 1841 TCCA-AAGGAATCACAGCAGAGAGGTGTTGGACCTAATGGTTCGAATGCTTGGATTCTCG 1899
|||| ||| ||||| | || |||||| |||||||| |||||||| ||||| ||||||||
Sbjct 1757 TCCAGAAG-AATCATAACAAAGAGGTTTTGGACCTCATGGTTCGGATGCTAGGATTCTCA 1815
Query 1900 GAGGAAGAAAAACAGCGAATAGGATTGGCACAACAAGGAGCGGCAGGTAAAGGTGTTGTT 1959
|||||||| ||| |||| || ||| ||||||| || | | |||||||||||||
Sbjct 1816 GAGGAAGATAAAGAGCGGATTGGAGCGGCACAA---GGTG-G-----TAAAGGTGTTGTT 1866
Query 1960 AGAGGTGTATTGGGTTTTCCGGGTCGCTTAGTCGGTGGCATCTTAGGCGGTGGCGGTGGC 2019
||||| |||||||| |||||||||||||| ||||| || || || || | ||| | |
Sbjct 1867 AGAGGCGTATTGGGCTTTCCGGGTCGCTTTGTCGGCGGAATTTT-GG-G-TGG-GAAATC 1922
Query 2020 T-CACCCGATTCTCATCCAAATATGGCTTCAGATAATCAGTCTTTTGCAGA-CATGTGGG 2077
| || || || ||| | ||| |||||| ||||| ||||||||||| || | | ||||
Sbjct 1923 TGCA---GAGTCACATGCTAATGCGGCTTCTGATAACCAGTCTTTTGCGGATC-TATGGG 1978
Query 2078 TCGAATTTCT-ACTTAaagacgcggaagagcgagagagaagagaagcagaagatgcagca 2136
| || ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1979 TTGA-TTTCTTACTCAAAGACGCGGAAGAGCGAGAGAGAAGAGAAGCAGAAGAAGCAGCA 2037
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90083429425
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5