BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G46260.1
Length=1999
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483774 jgi|Araly1|483774|fgenesh2_kg.4__2834__AT2G46260.1 3077 0.0
Ahg486647 jgi|Araly1|486647|fgenesh2_kg.5__2639__AT3G61600.1 1539 0.0
> Ahg483774 jgi|Araly1|483774|fgenesh2_kg.4__2834__AT2G46260.1
Length=1919
Score = 3077 bits (1666), Expect = 0.0
Identities = 1839/1923 (96%), Gaps = 9/1923 (0%)
Strand=Plus/Plus
Query 1 AGAGAAAGACTTTTTTAGTGTTTCTTTGTCATTTTCGTTCCTCaaaaaaaCCTTTTCGAA 60
||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1 AGAGAGAGACTTTTTTAGGGTTTCTTTGTTATTTTCGTTCCTC-AAAAAACCTTTTCGAA 59
Query 61 --TTTGACCCTTATTGTTATCCTGATTCTTCTGCTCGGTTCTCGCCGGAGAGAAGACACG 118
|||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 60 TTTTTGACCCTTATAGTTTTCCTGATTCTTCTGCTCGGTTCTCGCCGGAGAGAAG--ACG 117
Query 119 GAGAAGAGGGTTTTCGAAAAGGAGGATGAGAGGTTCCAATAACACCGATCTATTTGACCC 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 GAGAAGAGGGTTTTCGAAAAGGAGGATGAGAGGTTCCAATAACACCGATCTATTTGACCC 177
Query 179 TAAGACGGAGATGGATTCCAATTTCTCTCGCCATGGTTCTTCCTCCGAAGGTGATTTTGG 238
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 178 TAAGACGGAGATGGATTCCAATTTCTCCCGCCATGGTTCTTCCTCCGAAGGTGATTTTGG 237
Query 239 TTTCGCTTTCAATGACAGTAACTTCTCCGATCGTTTGCTCCGGATCGAGATCTTGGGTGG 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 TTTCGCTTTCAATGACAGTAACTTCTCCGATCGTTTGCTCCGGATCGAGATCTTGGGTGG 297
Query 299 GCCTTCGGATTCTAGGTCTGATGCTGAAGGATGTACGAGTATTGCCGATTGGGCTCGTCA 358
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 298 GCCTTCGGATTCTAGGTCTGATGGTGAAGGATGTACGAGTATTGCCGATTGGGCTCGTCA 357
Query 359 TCGCAAGAGGAGAAGAGAGGACAACAAGAAGGACAATGGTGTTGCGATTTCAGACATTGT 418
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 CCGCAAGAGAAGAAGAGAGGACAACAAGAAGGACAATGGTGTTGCGATTTCAGACATTGT 417
Query 419 GGCATGTGCTGAAGAACAGATTTTAACCGATAACAACCAACCTGATATGGATGATGCTCC 478
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 418 GGCATGTGCTGAAGAACAGATTTTAACCGATAACAACCAACCTGATATGGATGATGGTCC 477
Query 479 TGGTGGTGATAATCTTGACGATGAAGGAGAGGCAATGGTTGAAGAGGCTTTATCAGGTGA 538
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 478 TGGTGGTGATAATCTTGACGATGAAGGAGAGGCTATGGTCGAAGAGGCTTTATCAGGTGA 537
Query 539 TGATGATGCATCTAGTGAGCCAAACTGGGGTATTGATTGTTCTACTGTTGTTAGAGTTAA 598
||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 538 TGACGATGCATCTAGCGAGCCAAATTGGGGTATTGATTGTTCTACTGTTGTTAGAGTTAA 597
Query 599 AGAACTGCATATTAGTTCTCCTATCTTGGCCGCAAAAAGCCCCTTTTTCTACAAGCTGTT 658
|||||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||||
Sbjct 598 AGAACTGCATATTAGTTCCCCTATCTTGGCTGCTAAAAGCCCCTTTTTCTACAAGTTGTT 657
Query 659 TTCTAATGGAATGAGGGAATCAGAACAAAGACATGTAACCCTTAGAATTAGTGCACAAGA 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 TTCTAATGGAATGAGGGAATCAGAACAAAGACATGTAACCCTTAGAATTAGTGCACAAGA 717
Query 719 GGAAGGTGCTTTGATGGAGCTTTTAAACTTTATGTATAGCAACTCTCTAAGTGTCACAAC 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 GGAAGGTGCTTTGATGGAGCTTTTAAACTTTATGTATAGCAACTCTCTAAGTGTCACAAC 777
Query 779 AGCACCCGCTTTATTAGATGTTCTTATGGCTGCTGACAAGTTTGAGGTTGCTTCCTGTAT 838
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 778 AGCACCTGCTTTATTAGATGTGCTTATGGCTGCTGACAAGTTTGAGGTTGCTTCCTGCAT 837
Query 839 GAGGTATTGTAGTAGACTACTGCGAAATATGCCCATGACCCCTGATTCTGCTTTGCTCTA 898
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 838 GAGGTATTGTAGTAGACTACTGCGCAATATGCCCATGACCCCTGATTCCGCTTTGCTCTA 897
Query 899 TCTTGAGCTGCCCTCTAGTGTTTTAATGGCTGAAGCAGTGCAACCTCTAACCGATGCAGC 958
||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 898 TCTCGAGCTTCCCTCTAGTGTTTTAATGGCTGAAGCAGTCCAACCTCTAACCGATGCAGC 957
Query 959 AAAGCAGTTCCTTGCCTCGCGCTACAAGGATATTACCAAGTTTCATGATGAGGTTATGGC 1018
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 958 AAAGCAGTTCCTTGCCTCCCGCTACAAGGATATTACCAAATTTCATGATGAGGTTATGGC 1017
Query 1019 CTTACCATTGGCTGGAATAGAGGCGATACTATCGAGCGATGATCTCCAAATTGCTTCTGA 1078
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1018 CTTACCATTGGCTGGAATTGAGGCGATACTGTCGAGCGATGATCTCCAAATTGCTTCTGA 1077
Query 1079 GGATGCTGTTTATGATTTTGTCTTGAAATGGGCAAGGGGACAGTATAGTTCATTGGAAGA 1138
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 1078 GGATGCTGTTTATGATTTTGTTTTGAAATGGGCAAGGGGACAGTACAGTTCATTGGAAGA 1137
Query 1139 TCGTAGAGAGATTCTGGGTTCACGCCTTGCACTCTACATCCGCTTCCCATACATGACGTG 1198
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1138 CCGTAGAGAGATTCTGGGTTCACGCCTTGCGCTCTACATCCGCTTCCCATACATGACATG 1197
Query 1199 TCGAAAGCTGAAAAAGGTACTAACGTGCAGTGATTTTGAGCATGAAGTAGCATCAAAGCA 1258
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1198 TCGAAAGCTGAAAAAGGTACTAACGTGTAGCGATTTTGAGCATGAAGTAGCATCAAAGCA 1257
Query 1259 AGTATTAGAAGCGCTCTTCTTCAAAGCAGAAGCCCCACACAGGCAACGCATCCTCGCAGC 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 AGTATTAGAAGCGCTCTTCTTCAAAGCAGAAGCCCCACACAGGCAACGCATCCTCGCAGC 1317
Query 1319 TGAAGGATCGGACTCCATGAACCGCCGTTTCATAGAGAGGGCTTACAAATACAGACCCGT 1378
||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1318 TGAAGGATCAGACTCCTTGAATCGCCGTTTCATAGAGAGGGCTTACAAATACAGACCCGT 1377
Query 1379 AAAAGTGGTGGAGTTTGAGCTTCCTCGCCCGCAATGTGTAGTGTACCTGGACTTGAAGCG 1438
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 1378 AAAAGTGGTGGAGTTTGAGCTTCCTCGGCCGCAATGTGTAGTGTACTTGGACTTGAAGCG 1437
Query 1439 AGAGGAATGCGCAGGACTATTCCCTTCAGGAAGAGTCTATTCTCAGGCTTTCCACTTAGG 1498
|||||||||||||||| | |||||||| |||||||||||||||||||| |||||||||||
Sbjct 1438 AGAGGAATGCGCAGGATTGTTCCCTTCGGGAAGAGTCTATTCTCAGGCCTTCCACTTAGG 1497
Query 1499 AGGTCAAGGTTTCTTCCTCTCAGCACACTGCAACATGGACCAGCAAAGCTCGTTCCACTG 1558
||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1498 AGGTCAAGGGTTCTTTCTCTCGGCACACTGCAACATGGACCAGCAAAGCTCGTTCCACTG 1557
Query 1559 CTTTGGGCTATTCCTCGGAATGCAAGAGAAAGGGGCTGTGAGTTTTGGTGTGGACTACGA 1618
|||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1558 CTTTGGGCTATTCCTCGGGATGCAAGAAAAAGGAGCTGTGAGTTTTGGTGTGGACTACGA 1617
Query 1619 ATTTGCGGCAAGAGATAAAAG-TACAAAGGAAGAATACGTAAGCAAATACAAAGGAAACT 1677
||| |||||||||||||||| | || |||||||||||||||||||||||||||||||
Sbjct 1618 ATTCGCGGCAAGAGATAAAAAAT-CATCCGAAGAATACGTAAGCAAATACAAAGGAAACT 1676
Query 1678 ACACATTCACAGGGGGGAAAGCGGTTGGTTACAGAAACCTTTTCGGGATTCCATGGACTT 1737
|||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||
Sbjct 1677 ACACATTCACAGGGGGGAAAGCAGTTGGTTACAGAAATCTTTTTGGGATTCCGTGGACTT 1736
Query 1738 CGTTCATAGCCGAGGACAGTCAACATTTCATCAATGGCATTCTCCATCTCAGAGCCGAGC 1797
||||||| || || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1737 CGTTCATTGCTGATGACAGTCAGCATTTCATCAATGGCATTCTCCATCTCAGAGCCGAGC 1796
Query 1798 TCACCATTAAACGTTCCTCAGACCTGCACTGACTGTTTTCT-tctctctctctctctATG 1856
|||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 1797 TCACCATTAAGCGTTCCTCAGACCTGCACTGACTGTTTTCTCTCTCTCTCTTTCTCTACA 1856
Query 1857 TCGTCACATTTAAGTTGTATAATCTCGTTATGTAGC-AGCTCTAACCACGAGTGTCCTTT 1915
| | ||| |||||||||||| ||||||||||||||| ||||||||||||||||||| |||
Sbjct 1857 TGGCCACGTTTAAGTTGTATTATCTCGTTATGTAGCCAGCTCTAACCACGAGTGTCTTTT 1916
Query 1916 GTA 1918
|||
Sbjct 1917 GTA 1919
> Ahg486647 jgi|Araly1|486647|fgenesh2_kg.5__2639__AT3G61600.1
Length=2173
Score = 1539 bits (833), Expect = 0.0
Identities = 1440/1729 (83%), Gaps = 58/1729 (3%)
Strand=Plus/Plus
Query 143 GATGAGAGGTTCCAAT---AACACCGATCTATTTGA-CCCTAAGACGGAGATGGATTCC- 197
|||||||||| | ||| || || ||||| || || ||| || || | ||||| |||
Sbjct 130 GATGAGAGGTACTAATGAGAATACGGATCTGTTCGATCCC-AAAACCCAAATGGA-TCCT 187
Query 198 AATTTCTCTCGCCATGGTTCTTCCTCCGAAGGTGATTTTGGTTTCGCTTTCAATGACAGT 257
||||| |||| ||||||||||| ||||| || |||||||| |||||||| || ||||||
Sbjct 188 GATTTCACTCGTCATGGTTCTTCTTCCGACGGCGATTTTGGATTCGCTTTTAACGACAGT 247
Query 258 AACTTCTCCGATCGTTTGCTCCGGATCGAGATCTTGGGTGGGCCTTCGGATTCTAGGTCT 317
|||||||| ||||| ||||| |||||||||||| ||||||| ||||| |||||||||||
Sbjct 248 AACTTCTCTGATCGCTTGCTTCGGATCGAGATCATGGGTGGACCTTCTGATTCTAGGTCC 307
Query 318 GATGCTGAAGGATGTACGAGTATTGCCGATTGGGCTCGTCATCGCAAGAGGAGAAGAGAG 377
|||| |||||| ||||||||||| || ||||||||||||||||| || || ||||| ||
Sbjct 308 GATGTTGAAGGGTGTACGAGTATCGCTGATTGGGCTCGTCATCGGAAAAGAAGAAGGGAA 367
Query 378 GACAACAAGAAGG-A-C-AATGGTGTTGCGATTTCAGACATTGTGGCATGTGCTGAAGAA 434
|| | ||| |||| | | |||||| ||||||||||||||||||||||| |||| ||
Sbjct 368 GATATCAAAAAGGAATCTGGTGGTGTCACGATTTCAGACATTGTGGCATGTCCTGAGGAG 427
Query 435 CAGATTTTAACCGATAACAACCAACCTGATATGGAT-GATGCTCCTGGTGGTGATAATCT 493
||||||||||| ||| || |||||||| |||||| |||| |||||||||||| |||||
Sbjct 428 CAGATTTTAACTGAT--GAA-CAACCTGACATGGATGGATG-TCCTGGTGGTGAAAATCT 483
Query 494 TGACGATG-A--AGGAGAGGCAATGGTTGAAGAGGCTTTATCAGGTGATGATGATG---C 547
||| |||| | ||||||||||||||||||||| |||||||| |||||||| || | |
Sbjct 484 TGATGATGAAGGAGGAGAGGCAATGGTTGAAGAAGCTTTATCTGGTGATGAAGAGGAAAC 543
Query 548 ATCTAGTGAGCCAAACTGGGGTATTGATTGTTCTACTGTTGTTAGAGTTAAAGAACTGCA 607
|||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| ||
Sbjct 544 GTCTAGTGAGCCAAACTGGGGAATGGATTGTTCTACAGTTGTTAGGGTTAAAGAACTTCA 603
Query 608 TATTAGTTCTCCTATCTTGGCCGCAAAAAGCCCCTTT-TTCTACAAGCTGTTTTCTAATG 666
||| ||||||||||| || || || ||||| |||||| || |||||| |||| || ||||
Sbjct 604 TATCAGTTCTCCTATTTTAGCTGCCAAAAG-CCCTTTCTTTTACAAGTTGTTCTCCAATG 662
Query 667 GAATGAGGGAATCAGAACAAAGACATGTAACCCTTAGAATTAGTGCA-CAAGAGGAAGGT 725
||||||||||||| || ||||| ||||| || |||||||||| |||| | ||| |||| |
Sbjct 663 GAATGAGGGAATCTGAGCAAAGGCATGTCACTCTTAGAATTAATGCATC-AGAAGAAGCT 721
Query 726 GCTTTGATGGAGCTTTTAAACTTTATGTATAGCAACT-C--TCTAAGTGTCACAACAGCA 782
||||||||||||||||||||||||||||||||||| | | ||| |||||| ||||||
Sbjct 722 GCTTTGATGGAGCTTTTAAACTTTATGTATAGCAA-TGCGGTCTC--TGTCACCACAGCA 778
Query 783 CCCGCTTTATTAGATGTTCTTATGGCTGCTGACAAGTTTGAGGTTGCTTCCTGTATGAGG 842
|| || ||||||||||| || |||||||| || |||||||| ||||| || || ||||||
Sbjct 779 CCTGCCTTATTAGATGTCCTGATGGCTGCCGATAAGTTTGAAGTTGCCTCTTGCATGAGG 838
Query 843 TATTGTAGTAGACTACTGCGAAATATGCCCATGACCCCTGATTCTGCTTTGCTCTATCTT 902
|| ||||||||||| || || |||||||| ||||| || || ||||| ||||||||||
Sbjct 839 TACTGTAGTAGACTTCTCCGTAATATGCCTATGACTCCAGAGTCTGCGCTGCTCTATCTC 898
Query 903 GAGCTGCCCTCTAGTGTTTTAATGGCTGAAGCAGTGCAACCTCTAACCGATGCAGCAAAG 962
||||| |||||||||||| ||||||| |||| || || ||| |||| ||||| |||||
Sbjct 899 GAGCTTCCCTCTAGTGTTCTAATGGCCAAAGCTGTTCAGCCTTTAACTGATGCTGCAAAA 958
Query 963 CAGTTCCTTGCCTCGCGCTACAAGGATATTACCAAGTTTCATGATGAGGTTATGGC-CTT 1021
|||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 959 CAGTTCCTTGCCGCCCGCTACAAGGATATTACCAAGTTTCATGAGGAGGTTATGGCTCT- 1017
Query 1022 ACCATTGGCTGGAATAGAGGCGATACTATCGAGCGATGATCTCCAAATTGCTTCTGAGGA 1081
||| || |||||||| ||||| || ||||| ||||||||||||||||| || || |||||
Sbjct 1018 ACCTTTAGCTGGAATTGAGGCAATTCTATCAAGCGATGATCTCCAAATCGCATCAGAGGA 1077
Query 1082 TGCTGTTTATGATTTTGTCTTGAAATGGGCAAGGGGACAGTATAGTTCATTGGAAGATCG 1141
||| |||||||||||| ||||||| |||||||||| ||| || || |||||||| ||
Sbjct 1078 TGCAGTTTATGATTTTATCTTGAAGTGGGCAAGGGCACAATACCCTTGTTTGGAAGAGCG 1137
Query 1142 TAGAGAGATTCT-GGGTTCACGCCTTGCACTCTACATCCGCTTCCCATACATGACGTGTC 1200
||||||||||| |||| ||||||||||||||| |||||||||||||| |||||| || |
Sbjct 1138 GAGAGAGATTCTCGGGT-CACGCCTTGCACTCTCCATCCGCTTCCCATTCATGACATGCC 1196
Query 1201 GAAAGCTGAA-AAAGGTACTAACGTGCAGTGATTTTGAGCATGAAGTAGCATCAAAGCAA 1259
|||||||||| |||| |||| || |||||||| |||||||||||| ||||||| ||||
Sbjct 1197 GAAAGCTGAAGAAAG-TACTGACATGCAGTGACTTTGAGCATGAAATAGCATCCAAGCTT 1255
Query 1260 GTAT-TAGAAGCGCTCTTCTTCAAAGCAGAAGCCCCACACAGGCAACGCATCCTCGCAGC 1318
|| | ||||||| || |||||||||||||||||||| ||||| ||||| | ||| || |
Sbjct 1256 GT-TCTAGAAGCTCTTTTCTTCAAAGCAGAAGCCCCGCACAGACAACGTAGCCTAGCCTC 1314
Query 1319 TGAAGGATCGG-ACTCCATGAACCGCCGTTTCATAGAGAGGGCTTACAAATACAGACCCG 1377
|||| ||| | | ||| |||||||||| | ||||||||||||||||||||||||||||
Sbjct 1315 CGAAGAATCTGCA-TCCCTGAACCGCCGCCTGATAGAGAGGGCTTACAAATACAGACCCG 1373
Query 1378 TAAAAGTGGTGGAGTTTGAGCTTCCTCGCCCGCAATGTGTAGTGTACCTGGACTTGAAGC 1437
| ||||| || |||||||||||||| | ||||| || ||||| ||||| ||| ||||
Sbjct 1374 TCAAAGTAGTCGAGTTTGAGCTTCCAAGACCGCAGTGCGTAGTCTACCTAGACCTGAAAA 1433
Query 1438 GAGAGGAATGCGCAGGACTATTCCCTTCAGGAAGAGTCTATTCTCAGGC-TTTCCACTTA 1496
|||| ||||| | ||| | ||||| || || ||||| ||||| ||||| |||| ||||
Sbjct 1434 GAGAAGAATGTGGGGGATTGTTCCCGTCGGGTAGAGTGTATTCGCAGGCCTTTC-ACTTG 1492
Query 1497 GGAGGTCAAGG-TTTCTTCCTCTCAGCACACTGCAACATGGACCAGCAAAGCTCGTTCCA 1555
||||||||||| ||| ||||| ||||| ||||||||||||||||| || |||||||||||
Sbjct 1493 GGAGGTCAAGGGTTT-TTCCTGTCAGCTCACTGCAACATGGACCAACAGAGCTCGTTCCA 1551
Query 1556 CTGCTTT-GGGCTATTCCTCGGAATGCAAGAGAAAGGGGCTGTGAGTTTTGGTGTGGACT 1614
||| ||| ||||| ||||| || ||||| ||||||||| | |||||||| || |||||||
Sbjct 1552 CTG-TTTCGGGCTGTTCCTAGGGATGCAGGAGAAAGGGTCGGTGAGTTTCGGAGTGGACT 1610
Query 1615 ACGAATT-TGCGGCAAGAGATAAAAGTACAAAGGAAGAATACGTAAGCAAATACAAAGGA 1673
| ||||| | |||| || | | |||| || ||| || | | ||||||||||||||||
Sbjct 1611 ATGAATTCT-CGGCGAG-G-TCAAAGC-CAGCGGAGGATTTCATAAGCAAATACAAAGGG 1666
Query 1674 AACTACACATTCACAGGGGGGAAAGCGGTTGGTTACAGAAACCT-TTTCGGGATTCCATG 1732
||||||||||||||||| |||||||| || |||||||||||||| ||| ||| | |||||
Sbjct 1667 AACTACACATTCACAGGAGGGAAAGCAGTAGGTTACAGAAACCTGTTTGGGG-TACCATG 1725
Query 1733 GACTTCGTTCATAGCCGAGGACAGTCAACATTTCATCAATGGCATTCTCCATCTCAGAGC 1792
||| || || ||||| ||||| |||||| | |||||||||||||||||||||||||||||
Sbjct 1726 GACGTCTTTTATAGCAGAGGATAGTCAATACTTCATCAATGGCATTCTCCATCTCAGAGC 1785
Query 1793 CGAGCTCACCATTAAACGTTCCT-CAGA-CCTGCACTGACTGTTTTCTt 1839
||||| ||||| ||| | || | |||| ||| | |||| |||| |||
Sbjct 1786 AGAGCTTACCATCAAAAGGTC-TACAGATCCTT-AGTGACCGTTTCCTT 1832
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75152053385
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5