BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G46960.2
Length=1854
Score E
Sequences producing significant alignments: (Bits) Value
Ahg346505 jgi|Araly1|346505|fgenesh1_pg.C_scaffold_4002847 2379 0.0
Ahg902749 jgi|Araly1|902749|Al_scaffold_0004_3399 953 0.0
Ahg935681 jgi|Araly1|935681|scaffold_403669.1 359 5e-98
> Ahg346505 jgi|Araly1|346505|fgenesh1_pg.C_scaffold_4002847
Length=1557
Score = 2379 bits (1288), Expect = 0.0
Identities = 1474/1564 (94%), Gaps = 11/1564 (1%)
Strand=Plus/Plus
Query 49 ATGGGGCTCGTAATTTTCTTGGCACTAATTGTCTTAATCCTTATTATTGGTCTCAGGATA 108
|||| |||||||||||||||||||||||||||||| ||| |||||||||| ||||||
Sbjct 1 ATGGAGCTCGTAATTTTCTTGGCACTAATTGTCTTGCTCC---TTATTGGTCTAAGGATA 57
Query 109 TTCAAAGCTTTTATGATTCTTGTTTGGCATCCATTTGTGTTGACCAGAAGACTCAAAAAC 168
||| | |||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 58 TTCGAGGCTTTTGTGATCCTTGTTTGGCATCCATTTGTGGTGACCAGAAGATTCAAAAAC 117
Query 169 CAAGGAATCTCAGGCCCAAATTACAGAATCTTTTACGGAAACCTCAGCGAGATAAAGAAG 228
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 118 CAAGGAATCTCAGGCCCAAAGTACAGAATCTTTCACGGAAACCTCAGCGAGATAAAGAAG 177
Query 229 ATGAAGAGAGAATCTCATCTTTCGATTCTTGATCCTAGCTCCAATGATATTTTCCCTCGT 288
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 178 ATGAAGAGAGAATCTCATCTTTCGACTCTTGATCCCAGCTCCAATGATATTTTCCCTCGT 237
Query 289 ATTCTTCCTCATTATCAAAAATGGATGTCTCAATACGGAGAGACTTTTCTTTACTGGAAC 348
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct 238 ATTCTTCCTCATTATCAACGATGGATGTCTCAATACGGAGAGACATTTCTTTACTGGAAC 297
Query 349 GGAACAGAGCCAAGGATATGCATCTCAGATCCTGAACTTGCAAAAACTATGTTGTCGAAC 408
|||||||| || |||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 298 GGAACAGAACCGAGGATATGCATCTCAGATCCTGAACTTGCAAAAAATATCTTGTCGAAC 357
Query 409 AAGTTAGGTTTCTTTGTCAAATCAAAGGCAAGACCTGAGGCT-GTTAAACTTGTCGGCTC 467
||||||||||||||||||||||||||| ||||| |||| | |||||||||||||||||
Sbjct 358 AAGTTAGGTTTCTTTGTCAAATCAAAGATGAGACCCGAGG-TCGTTAAACTTGTCGGCTC 416
Query 468 CAAAGGACTTGTCTTTATCGAAGGTGCTGATTGGGTTCGCCATAGAAGAATCTTGAACCC 527
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 417 CAAAGGACTTGTCTTTATCGAAGGTTCTGATTGGGTTCGCCATAGAAGAATCTTGAACCC 476
Query 528 TGCTTTCTCCATCGATAGGCTCAAGATCATGACGACCGTGATGGTTGATTGTACGCTCAA 587
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 477 TGCTTTCTCCATCGATAGGCTCAAGATCATGACTACCGTGATGGTGGATTGTACGCTCAA 536
Query 588 GATGTTAGAGGAGTGGAGAAAAGAG-AGCACTAAGGAAGAAACAGAGCACCCGAAGATTA 646
||||||||||||||||||||||||| || | |||||||||||||| ||| |||| |||||
Sbjct 537 GATGTTAGAGGAGTGGAGAAAAGAGAAG-AGTAAGGAAGAAACAGCGCAACCGATGATTA 595
Query 647 AAAAGGAAATGAACGA-AGAGTTCCAAAGACTAACAGCTGATATAATAGCAACCTCTGCG 705
||||||||||| || | ||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct 596 AAAAGGAAATGCAC-AGAGAGTTCCAAAGACTAACAGCAGATGTAATAGCGACCTCTGCT 654
Query 706 TTTGGAAGCAGTTACGTCGAAGGAATCGAAGTGTTTAGATCACAAATGGAGCTTAAAAGG 765
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 655 TTTGGAAGTAGTTACGTCGAAGGAATCGAAGTGTTTAGATCACAAATGGAGCTTAAAAAG 714
Query 766 TGTTATACAACTTCTCTCAACCAAGTCTCTATCCCTGGAACTCAGTACCTTCCTACGCCT 825
|||| || | | ||||||||| |||||| |||||||||||||||||| ||||||||||||
Sbjct 715 TGTTGTATACCGTCTCTCAACAAAGTCTTTATCCCTGGAACTCAGTATCTTCCTACGCCT 774
Query 826 TCGAACATTCGGGTATGGAAGCTGGAGAGGAAAATGGATAACTCAATTAAGAGAATTATA 885
|||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 775 TCGAACTTTCGGATATGGAAGCTGGAGAGGAAAATGGATAAGTCAATTAAGAGAATTATA 834
Query 886 AGTTCGAGACTACAGTCA-AAGTCAGATTATGGAGACGATCTTCTCGGAATCTTGTTGAA 944
|| ||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct 835 AGGTCGAGACTAGAGTCACAA-TCAGATTATGGAGACGATCTTCTGGGAATCTTGTTGAA 893
Query 945 AGCTTACAACACTGAAGGGAAGGAACGGAAGATGAGCATCGAAGAGATCATACATGAATG 1004
||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 894 AGCATACAAAACTGAAGGGAACGAACGAAAGATGAGCATCGAAGAGATCATACATGAATG 953
Query 1005 CAGGACTTTCTTCTTCGGAGGTCACGAAACTACTTCGAATTTATTGGCATGGACAACGAT 1064
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 954 CAGGACTTTCTTCTTCGGAGGTCACGAAACTACTGCGAATTTATTGACATGGACAACGAT 1013
Query 1065 GTTGCTGAGCTTGCACCAAGATTGGCAGGAGAAACTCAGAGAAGAGATATTCAAAGAATG 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 GTTGCTGAGCTTGCACCAAGATTGGCAGGAGAAACTCAGAGAAGAGATATTCAAAGAATG 1073
Query 1125 CGGTAAAGAAAAAACCCCAGATTCAGAAACTTTCTCCAAACTCAAGCTGATGAACATGGT 1184
|||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1074 TGGTAAACAAAAAACCCTAGATTCAGAAACTTTCTCCAAACTCAAACTGATGAACATGGT 1133
Query 1185 GATCATGGAGTCGCTTCGACTTTACGGACCAGTGTCAGCTTTGGCCCGAGAAGCATCAGT 1244
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1134 GATCATGGAGTCGCTTCGACTTTACGGACCAACGTCAGCTTTGGCCCGAGAAGCATCAGT 1193
Query 1245 AAATATAAAGTTAGGTGACCTAGAGATTCCCAAGGGCACAACCGTAGTCATCCCGCTTCT 1304
|| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1194 AAGCACAAAGCTAGGTGACCTAGAGATTCCCAAGGGCACAACCGTCGTCATCCCGCTTCT 1253
Query 1305 GAAGATGCATAGCGACAAGACCCTTTGGGGATCCGACGCCGACAAATTCAACCCAATGCG 1364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1254 GAAGATGCATAGCGACAAGACCCTTTGGGGATCCGACGCCGACAAATTCAACCCAACGCG 1313
Query 1365 GTTTGCAAACGGCGTTTCCCGAGCCGCCAATCACCCAAACGCTCTCCTAGCATTCTCCGT 1424
|||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1314 GTTTGCAAACGGTGTTTCCCGAGCCGCCAACCACCCAAATGCTCTCCTAGCATTCTCCGT 1373
Query 1425 CGGACCAAGAGCTTGCATTGGCCAAAACTTTGTCATGATCGAAGCCAAGACTGTGCTCAC 1484
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 CGGACCAAGAGCCTGCATTGGCCAAAACTTTGTCATGATCGAAGCCAAGACTGTGCTCAC 1433
Query 1485 CATGATTCTTCAACGGTTTCGGTTTATTAGCCTCTGTGACGAGTATAAGCACACCCCTGT 1544
|||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 1434 CATGATTCTTCAACGGTTTCGGTTTATTAGCCTCTGTGACGAGTATAAGCACGCGCCGGT 1493
Query 1545 GGATAACGTCACTATTCAGCCTCAGTACGGCTTACCCGTAATGCTTCAGCCTCTGGAAGA 1604
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 GGATCACCTCACTATTCAGCCTCAGTACGGCTTACCCGTAATGCTTCAGCCTCTGGAAGA 1553
Query 1605 CTGA 1608
||||
Sbjct 1554 CTGA 1557
> Ahg902749 jgi|Araly1|902749|Al_scaffold_0004_3399
Length=1554
Score = 953 bits (516), Expect = 0.0
Identities = 1192/1508 (79%), Gaps = 88/1508 (6%)
Strand=Plus/Plus
Query 123 GATTCTTGTTTGGCATCCATTTG-TGTTGA-CCAGAAGACTCAAAAACCAAGGAATCTCA 180
||| |||||||||| ||| ||| || | | | |||| | |||| || ||||||||||||
Sbjct 81 GATCCTTGTTTGGCGGCCA-TTGATGCT-ATCAAGAAAATTCAAGAAGCAAGGAATCTCA 138
Query 181 GGCCCAAATTACAGAATCTTTTACGGAAACCTCAGCGAGATAAAGAAGATGAAGAGA-GA 239
|||||||| ||||| ||||| ||||| |||||| ||||||| | |||| |||||| | |
Sbjct 139 GGCCCAAAATACAGGATCTTGTACGGGAACCTCCGCGAGATTAGGAAGGTGAAGA-ACGC 197
Query 240 ATCTCATCTTTCGATTCTTGATCCTAGCTCCAATGATATTTTCCCTCGTATTCTT-CCTC 298
| || | ||| |||||||||||| | |||||| ||||| ||||||| || || |||
Sbjct 198 AGCTAAGCTTAAGATTCTTGATCCAAACTCCAACGATATCGTCCCTCGCCTT-TTAGCTC 256
Query 299 AT-TATCAAAAATGGATGTCTCAATACGGAGAGACTTTTCTTTACTGG-AACGGAACAGA 356
|| | ||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct 257 ATCT-TCAGCAATGGATGTCTCAATACGGAGAGACTTTTCTTTACTGGCAA-GGTACAGA 314
Query 357 GCCAAGGATATGCATCTCAGATCCTGAACTTGCAAAAAC-TATGTTGTCGAACAAGTTAG 415
||||||| ||||||||||||||| ||| || || |||| || || ||||||||||| |
Sbjct 315 GCCAAGGTTATGCATCTCAGATCATGAGCTAGC-GAAACAGATCTTATCGAACAAGTTTG 373
Query 416 GTTTCTTTGTC-AAATCAAAGGCAAGACCTGAGGCT-GTTAAACTTGTC-GGCTCCAAAG 472
|||| |||| | ||||||||| ||| |||||| | | ||||||||| | || | || |
Sbjct 374 GTTTTTTTG-CTAAATCAAAGACAAAACCTGA-GATCCTTAAACTTG-CTGG-T--AATG 427
Query 473 GACTTGTCTTTATCGAA-GGTGC-TGATTGGGTTCGCCATAGAAGAATCTTGAACCCTGC 530
||||| || || | || ||| | |||||||||||| |||||| ||||||| ||||||||
Sbjct 428 GACTTATC-TTCGCAAATGGT-CTTGATTGGGTTCGGCATAGACGAATCTTAAACCCTGC 485
Query 531 TTTCTCCATCGATAGGCTCAAGATCATGA-CGACCGTGATGGTTGATTGTACGCTCAAG- 588
||||| || || | |||||| |||||| | | ||||||| ||||| || | ||
Sbjct 486 ATTCTCTATGGACAAACTCAAGCTCATGACCCA-ATTGATGGTGGATTGCAC-TTTGAGA 543
Query 589 ATGTTAGAGGAGTGGAGAAAAGAGAGCACTAAG-GAAGAAACAGAGCACCCGAAGATTAA 647
||||| || |||||| ||||| |||| | | | | ||||||||||| | | ||
Sbjct 544 ATGTTCGACGAGTGGGGAAAACAGAGGAAT-GGTGGCGAAACAGAGCAAGTGGTG-TT-- 599
Query 648 AAAGGAAATGAACGA-AGAGTTCCAA-AGACTAACAGCTGATATAATAGCAACCTCTGCG 705
| || | | | |||||| || ||| | || |||||||| ||||| || |||||
Sbjct 600 ----G--ATTAGC-AGAGAGTT-TAAGAGATTGACCGCTGATATCATAGCCACGGCTGCG 651
Query 706 TTTGGAAGCAGTTACGTC-GAAGGAATCGAAGTGTTTAGATCACAAATGGAGCT-TAAAA 763
|||||||||||||| | | ||||||||||||||||||| ||||||||| ||||| ||||
Sbjct 652 TTTGGAAGCAGTTATG-CGGAAGGAATCGAAGTGTTTAAATCACAAATAGAGCTCCAAAA 710
Query 764 GGTGTTATACAACTTCTCTCAAC-CAAGTCTCTATCCCTGGAACT-CAGTACCTTCCTAC 821
||||| | | ||||||| || | |||| | ||||||||| | ||||||||||||||
Sbjct 711 -GTGTTGTGCTGCTTCTCT-TACTGACGTCTATTTCCCTGGAA-TCCAGTACCTTCCTAC 767
Query 822 GCCTTCGAA-CATTCGGGTATGGAAGCTGGAGAGGAAAATGGATAACTCAATTAAGAGAA 880
||||||||| | ||| |||||||||| || |||||| || ||| ||| | || ||||
Sbjct 768 GCCTTCGAATC-TTCAAATATGGAAGCTTGATAGGAAAGTGAATAGCTCGACCAAAAGAA 826
Query 881 TTATAAG-TTCGAGACTACAGTC-AAAGT-C-AG-ATTATGGAGACGATCTTCTCGGAAT 935
| || || | |||| ||| | || || | | || |||| ||| | |||||||| |||||
Sbjct 827 TCAT-AGATGCGAGGCTAAAATCGGAA-TCCAAGAATTACGGAAATGATCTTCTGGGAAT 884
Query 936 CTTGTTGAA-AGCTTACAA-CACTGAA-G-GGAAG-GAACGGAAGATGAGCATCGAAGAG 990
| |||| || ||| | ||| | || || | | | ||| ||||||||||| || |||
Sbjct 885 CATGTT-AACAGC-TGCAAGCTCT-AACGAGTCTGAGAA--AAAGATGAGCATTGATGAG 939
Query 991 ATCATACATGAATGCAGGACTTTCTTCTTCGGAGGTCACGAAACTACTTCGAATTTATTG 1050
|||||| | ||||||| ||| |||||||||| ||| |||||||||||| ||||| |||||
Sbjct 940 ATCATAGAAGAATGCAAGACGTTCTTCTTCGCAGGACACGAAACTACTGCGAATCTATTG 999
Query 1051 GCATGGACAACGATGTTGCTGAGCTTGCACCAAGATTGGCAGGAGAAACTCAGAGAAG-A 1109
|||||| || |||||||| |||||||||||||||||||| |||||||||||||||| |
Sbjct 1000 ACATGGAGTACAATGTTGCTTAGCTTGCACCAAGATTGGCAAGAGAAACTCAGAGAAGAA 1059
Query 1110 GATATTCAAAGAATGCGGTAAAGAAAAAACCCCAGATTCAGAAACTTTCTCCAAACTCAA 1169
| | ||||| ||||| |||||||| |||| |||||||||||| || | | ||||||||||
Sbjct 1060 G-TTTTCAATGAATGTGGTAAAGACAAAATCCCAGATTCAGAGACATGCGCCAAACTCAA 1118
Query 1170 GCTGATGAACATGGTGATCATGGAGTCGCTTCGACTTTACGGACCAGTGTCAGCTTTGGC 1229
||||||||||||||| | |||||||| ||||| || ||||||||||||| | ||| ||
Sbjct 1119 ACTGATGAACATGGTGTTTATGGAGTCACTTCGTCTATACGGACCAGTGTTAAATTT-GC 1177
Query 1230 -CCGAGAAGCATCAGTAA-ATAT-AAAGTTAGGTGACCTAGAGATTCCC-AAGGGCACAA 1285
|||| |||||||| || |||| ||| ||||| ||||||||| |||| || ||||| |
Sbjct 1178 TCCGATTAGCATCAG-AAGATATGAAA-TTAGGAAACCTAGAGA-TCCCTAAAGGCACGA 1234
Query 1286 CCGTAGTCATCCCGCTTCTGAAGATGCATAGCGAC-AAGACCCTTTGGGGATCCGACGCC 1344
| ||||| ||||| || |||||||||| || ||| ||| || |||||||| ||||||
Sbjct 1235 CTATAGTCCTCCCGATTGTGAAGATGCACAGAGACAAAG-CCATTTGGGGAAGTGACGCC 1293
Query 1345 GACAAATTCAACCCAATGCGGTTTGCAAACGGCGTTTCCCGAGCCGCCAATCACCCAAAC 1404
|||||||||||||| |||||||||| ||||||| ||| || ||||| ||||||||||||
Sbjct 1294 GACAAATTCAACCCTATGCGGTTTGAAAACGGCAATTCTCGGGCCGCTAATCACCCAAAC 1353
Query 1405 GCTCTCCTAGCATTCTCCGTCGGACCAAGAGCTTGCATTGGCCAAAACTTTGTCATGATC 1464
||||| || || || || ||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1354 GCTCTTCTCGCGTTTTCAATCGGACCAAGAGCTTGCATTGGCCAAAACTTTGCCATAATG 1413
Query 1465 GAAGCCAAGACTGTGCTCACCATGATTCTTCAACGGTTTCGGTTTATTAGCCTCTGTGAC 1524
||||||||||| || || ||||||||||||||||||| ||| | | | | || || |
Sbjct 1414 GAAGCCAAGACCGTTCTTGCCATGATTCTTCAACGGTTCCGGCTCAATCTC-TCCGT--C 1470
Query 1525 GAGTATAAGCACACCCCTGTGGATAACGTCACTATTCAGCCTCAGTACGGCTTACCCGTA 1584
|| ||||| ||| | || | |||| || ||||| ||||||||||||||| ||||| ||
Sbjct 1471 GATTATAAACACGCGCCAGCGGATCACCTCACTCTTCAGCCTCAGTACGATTTACCTGTG 1530
Query 1585 ATGCTTCA 1592
||||||||
Sbjct 1531 ATGCTTCA 1538
> Ahg935681 jgi|Araly1|935681|scaffold_403669.1
Length=1421
Score = 359 bits (194), Expect = 5e-98
Identities = 591/774 (76%), Gaps = 61/774 (8%)
Strand=Plus/Plus
Query 326 GAGAGACTTTTCTTTACTGGAACGGAACAGAGCCAAGGATATGCATCTCAGATCCTGAAC 385
|||| || ||||| |||||||| ||||||||||| | |||||||| ||||||||||||||
Sbjct 263 GAGAAACATTTCTCTACTGGAATGGAACAGAGCCGACGATATGCACCTCAGATCCTGAAC 322
Query 386 TTGCAAAAAC-TATGTTGTCGAACAAGTTAGGTTTCTT-TGTCAAATCAAAG-GCAAGAC 442
| || |||| || ||||||| |||||||||||| || || | ||||||| | ||||
Sbjct 323 TAGC-TAAACAAATCTTGTCGAGCAAGTTAGGTTT-TTCGGTTAGATCAAAGAG-GAGAC 379
Query 443 CTGAGGCTG-TTAAACTTGTCGGCTCCAAAGGACTTGTCTTTATC-GAAGGTGCTGATTG 500
| || | || | | | || |||| | ||||||||| || || || || |||||||||||
Sbjct 380 CGGA-GTTGCTCATATTTTTCGG-T--AAAGGACTT-TCCTTCTCTGAGGGTGCTGATTG 434
Query 501 GGTTCGCCATAGAAGAATCTTGAACCCTGCTTTCTCCA-TCGATAGGCTCAAGATCATGA 559
|||||||||||||||||||||||||||||| ||||||| | || |||| ||| ||||||
Sbjct 435 GGTTCGCCATAGAAGAATCTTGAACCCTGCATTCTCCACT-GACCGGCTTAAGGTCATGA 493
Query 560 CGACCGT-GATGGTTGATTGTACGCTCAAGATGTTAGAGGAGTGGAGAAAAGAGAGCAC- 617
||| | |||||| ||||| || | | ||| || ||||||||||||||| ||| ||
Sbjct 494 CGAAA-TCGATGGTGGATTGCACATTGAGGATATTCGAGGAGTGGAGAAAACAGAACAAA 552
Query 618 TAAGGAAGAAACAGAGCACCC-GAAGATTAAAAAGGAAATGAACGAA-GAGTTCCAAAGA 675
|| | ||||||||||||| | ||| || | ||| ||||| ||| ||||| | ||
Sbjct 553 TATG-AAGAAACAGAGCAAAATGT-GATGAAGATGGAGATGAA-GAAAGAGTTTTATCGA 609
Query 676 CTAACAGCTGATATAATAGCAACCTCTGCGTTTGGAAGCAGTTACGTCGAAGGAA-TCGA 734
|||| |||||||| ||||| ||| ||||||||||||||||||||| |||||||| | ||
Sbjct 610 TTAACCGCTGATATTATAGCGACCACTGCGTTTGGAAGCAGTTACGCCGAAGGAAAT-GA 668
Query 735 AGTGTTTAGATCACAAATGGAGCTTAA-AAGGTGTTATACAACTTCT-CTCAACCAA-GT 791
| | |||||| |||| | |||||| || |||| | |||||| | || |||| ||
Sbjct 669 AATCTTTAGAGCACATGTAGAGCTTCGGAAT-TGTTGTGTTACTTCTGC-CA-CCAAAGT 725
Query 792 CT-CTATCC-CTGGAACTCAGTACCTTCCTACGCCTTCGAA-CATTCGGGTATGGAAGCT 848
| | |||| | |||| |||||||||||||| |||| ||| | |||| ||||||||||
Sbjct 726 GTTC-ATCCAC-GGAAAACAGTACCTTCCTACACCTTTGAATC-TTCGTATATGGAAGCT 782
Query 849 GGAGAGGAAAATGGATAACTCAATTAAGAGAATTATAAGTTCGAGACTACAG-TCAAA-G 906
|| |||||| | | ||| | | | |||| || | || || |||| | | ||| |
Sbjct 783 CGATAGGAAAGTAAAGAAC--A-TGATCAGAAGAATCA-TT-GATACTAG-GCTAAAATG 836
Query 907 TCAGATT-ATGGAGACGAT---CTTCTCGGAATCTTGTTGAAA-GCTTACAACA-CTGAA 960
||| | ||||||| ||| ||||| |||||| |||| ||| ||| |||| |||||
Sbjct 837 GAAGAATCATGGAGATGATGATCTTCTAGGAATCATGTT-AAACGCTG-CAACCTCTGAA 894
Query 961 GGGAA-G-GAACGGAAGATGAGCATCGAAGAGATCATACATGAATGCAGGACTTTCTTC- 1017
| | ||| ||| ||||||| || ||||||||| | ||||||| | |||||||
Sbjct 895 GATCCCGAGAAA--AAGTTGAGCATAGATGAGATCATAGAAGAATGCAAAAATTTCTTCA 952
Query 1018 T-TCGGAGGTCACGAAACTACTTCGAATTTATTGGCATGGACAACGATGTTGCT 1070
| || ||| |||| ||||||||||| ||||||||||||||| |||||||||||
Sbjct 953 TATC--AGGACACGGAACTACTTCGATTTTATTGGCATGGACTACGATGTTGCT 1004
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69628967860
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5