BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G46960.2 Length=1854 Score E Sequences producing significant alignments: (Bits) Value Ahg346505 jgi|Araly1|346505|fgenesh1_pg.C_scaffold_4002847 2379 0.0 Ahg902749 jgi|Araly1|902749|Al_scaffold_0004_3399 953 0.0 Ahg935681 jgi|Araly1|935681|scaffold_403669.1 359 5e-98 > Ahg346505 jgi|Araly1|346505|fgenesh1_pg.C_scaffold_4002847 Length=1557 Score = 2379 bits (1288), Expect = 0.0 Identities = 1474/1564 (94%), Gaps = 11/1564 (1%) Strand=Plus/Plus Query 49 ATGGGGCTCGTAATTTTCTTGGCACTAATTGTCTTAATCCTTATTATTGGTCTCAGGATA 108 |||| |||||||||||||||||||||||||||||| ||| |||||||||| |||||| Sbjct 1 ATGGAGCTCGTAATTTTCTTGGCACTAATTGTCTTGCTCC---TTATTGGTCTAAGGATA 57 Query 109 TTCAAAGCTTTTATGATTCTTGTTTGGCATCCATTTGTGTTGACCAGAAGACTCAAAAAC 168 ||| | |||||| |||| ||||||||||||||||||||| ||||||||||| |||||||| Sbjct 58 TTCGAGGCTTTTGTGATCCTTGTTTGGCATCCATTTGTGGTGACCAGAAGATTCAAAAAC 117 Query 169 CAAGGAATCTCAGGCCCAAATTACAGAATCTTTTACGGAAACCTCAGCGAGATAAAGAAG 228 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct 118 CAAGGAATCTCAGGCCCAAAGTACAGAATCTTTCACGGAAACCTCAGCGAGATAAAGAAG 177 Query 229 ATGAAGAGAGAATCTCATCTTTCGATTCTTGATCCTAGCTCCAATGATATTTTCCCTCGT 288 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 178 ATGAAGAGAGAATCTCATCTTTCGACTCTTGATCCCAGCTCCAATGATATTTTCCCTCGT 237 Query 289 ATTCTTCCTCATTATCAAAAATGGATGTCTCAATACGGAGAGACTTTTCTTTACTGGAAC 348 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct 238 ATTCTTCCTCATTATCAACGATGGATGTCTCAATACGGAGAGACATTTCTTTACTGGAAC 297 Query 349 GGAACAGAGCCAAGGATATGCATCTCAGATCCTGAACTTGCAAAAACTATGTTGTCGAAC 408 |||||||| || |||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 298 GGAACAGAACCGAGGATATGCATCTCAGATCCTGAACTTGCAAAAAATATCTTGTCGAAC 357 Query 409 AAGTTAGGTTTCTTTGTCAAATCAAAGGCAAGACCTGAGGCT-GTTAAACTTGTCGGCTC 467 ||||||||||||||||||||||||||| ||||| |||| | ||||||||||||||||| Sbjct 358 AAGTTAGGTTTCTTTGTCAAATCAAAGATGAGACCCGAGG-TCGTTAAACTTGTCGGCTC 416 Query 468 CAAAGGACTTGTCTTTATCGAAGGTGCTGATTGGGTTCGCCATAGAAGAATCTTGAACCC 527 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 417 CAAAGGACTTGTCTTTATCGAAGGTTCTGATTGGGTTCGCCATAGAAGAATCTTGAACCC 476 Query 528 TGCTTTCTCCATCGATAGGCTCAAGATCATGACGACCGTGATGGTTGATTGTACGCTCAA 587 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 477 TGCTTTCTCCATCGATAGGCTCAAGATCATGACTACCGTGATGGTGGATTGTACGCTCAA 536 Query 588 GATGTTAGAGGAGTGGAGAAAAGAG-AGCACTAAGGAAGAAACAGAGCACCCGAAGATTA 646 ||||||||||||||||||||||||| || | |||||||||||||| ||| |||| ||||| Sbjct 537 GATGTTAGAGGAGTGGAGAAAAGAGAAG-AGTAAGGAAGAAACAGCGCAACCGATGATTA 595 Query 647 AAAAGGAAATGAACGA-AGAGTTCCAAAGACTAACAGCTGATATAATAGCAACCTCTGCG 705 ||||||||||| || | ||||||||||||||||||||| ||| ||||||| |||||||| Sbjct 596 AAAAGGAAATGCAC-AGAGAGTTCCAAAGACTAACAGCAGATGTAATAGCGACCTCTGCT 654 Query 706 TTTGGAAGCAGTTACGTCGAAGGAATCGAAGTGTTTAGATCACAAATGGAGCTTAAAAGG 765 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 655 TTTGGAAGTAGTTACGTCGAAGGAATCGAAGTGTTTAGATCACAAATGGAGCTTAAAAAG 714 Query 766 TGTTATACAACTTCTCTCAACCAAGTCTCTATCCCTGGAACTCAGTACCTTCCTACGCCT 825 |||| || | | ||||||||| |||||| |||||||||||||||||| |||||||||||| Sbjct 715 TGTTGTATACCGTCTCTCAACAAAGTCTTTATCCCTGGAACTCAGTATCTTCCTACGCCT 774 Query 826 TCGAACATTCGGGTATGGAAGCTGGAGAGGAAAATGGATAACTCAATTAAGAGAATTATA 885 |||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 775 TCGAACTTTCGGATATGGAAGCTGGAGAGGAAAATGGATAAGTCAATTAAGAGAATTATA 834 Query 886 AGTTCGAGACTACAGTCA-AAGTCAGATTATGGAGACGATCTTCTCGGAATCTTGTTGAA 944 || ||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| Sbjct 835 AGGTCGAGACTAGAGTCACAA-TCAGATTATGGAGACGATCTTCTGGGAATCTTGTTGAA 893 Query 945 AGCTTACAACACTGAAGGGAAGGAACGGAAGATGAGCATCGAAGAGATCATACATGAATG 1004 ||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 894 AGCATACAAAACTGAAGGGAACGAACGAAAGATGAGCATCGAAGAGATCATACATGAATG 953 Query 1005 CAGGACTTTCTTCTTCGGAGGTCACGAAACTACTTCGAATTTATTGGCATGGACAACGAT 1064 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 954 CAGGACTTTCTTCTTCGGAGGTCACGAAACTACTGCGAATTTATTGACATGGACAACGAT 1013 Query 1065 GTTGCTGAGCTTGCACCAAGATTGGCAGGAGAAACTCAGAGAAGAGATATTCAAAGAATG 1124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1014 GTTGCTGAGCTTGCACCAAGATTGGCAGGAGAAACTCAGAGAAGAGATATTCAAAGAATG 1073 Query 1125 CGGTAAAGAAAAAACCCCAGATTCAGAAACTTTCTCCAAACTCAAGCTGATGAACATGGT 1184 |||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct 1074 TGGTAAACAAAAAACCCTAGATTCAGAAACTTTCTCCAAACTCAAACTGATGAACATGGT 1133 Query 1185 GATCATGGAGTCGCTTCGACTTTACGGACCAGTGTCAGCTTTGGCCCGAGAAGCATCAGT 1244 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1134 GATCATGGAGTCGCTTCGACTTTACGGACCAACGTCAGCTTTGGCCCGAGAAGCATCAGT 1193 Query 1245 AAATATAAAGTTAGGTGACCTAGAGATTCCCAAGGGCACAACCGTAGTCATCCCGCTTCT 1304 || | |||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1194 AAGCACAAAGCTAGGTGACCTAGAGATTCCCAAGGGCACAACCGTCGTCATCCCGCTTCT 1253 Query 1305 GAAGATGCATAGCGACAAGACCCTTTGGGGATCCGACGCCGACAAATTCAACCCAATGCG 1364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1254 GAAGATGCATAGCGACAAGACCCTTTGGGGATCCGACGCCGACAAATTCAACCCAACGCG 1313 Query 1365 GTTTGCAAACGGCGTTTCCCGAGCCGCCAATCACCCAAACGCTCTCCTAGCATTCTCCGT 1424 |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 1314 GTTTGCAAACGGTGTTTCCCGAGCCGCCAACCACCCAAATGCTCTCCTAGCATTCTCCGT 1373 Query 1425 CGGACCAAGAGCTTGCATTGGCCAAAACTTTGTCATGATCGAAGCCAAGACTGTGCTCAC 1484 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1374 CGGACCAAGAGCCTGCATTGGCCAAAACTTTGTCATGATCGAAGCCAAGACTGTGCTCAC 1433 Query 1485 CATGATTCTTCAACGGTTTCGGTTTATTAGCCTCTGTGACGAGTATAAGCACACCCCTGT 1544 |||||||||||||||||||||||||||||||||||||||||||||||||||| | || || Sbjct 1434 CATGATTCTTCAACGGTTTCGGTTTATTAGCCTCTGTGACGAGTATAAGCACGCGCCGGT 1493 Query 1545 GGATAACGTCACTATTCAGCCTCAGTACGGCTTACCCGTAATGCTTCAGCCTCTGGAAGA 1604 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1494 GGATCACCTCACTATTCAGCCTCAGTACGGCTTACCCGTAATGCTTCAGCCTCTGGAAGA 1553 Query 1605 CTGA 1608 |||| Sbjct 1554 CTGA 1557 > Ahg902749 jgi|Araly1|902749|Al_scaffold_0004_3399 Length=1554 Score = 953 bits (516), Expect = 0.0 Identities = 1192/1508 (79%), Gaps = 88/1508 (6%) Strand=Plus/Plus Query 123 GATTCTTGTTTGGCATCCATTTG-TGTTGA-CCAGAAGACTCAAAAACCAAGGAATCTCA 180 ||| |||||||||| ||| ||| || | | | |||| | |||| || |||||||||||| Sbjct 81 GATCCTTGTTTGGCGGCCA-TTGATGCT-ATCAAGAAAATTCAAGAAGCAAGGAATCTCA 138 Query 181 GGCCCAAATTACAGAATCTTTTACGGAAACCTCAGCGAGATAAAGAAGATGAAGAGA-GA 239 |||||||| ||||| ||||| ||||| |||||| ||||||| | |||| |||||| | | Sbjct 139 GGCCCAAAATACAGGATCTTGTACGGGAACCTCCGCGAGATTAGGAAGGTGAAGA-ACGC 197 Query 240 ATCTCATCTTTCGATTCTTGATCCTAGCTCCAATGATATTTTCCCTCGTATTCTT-CCTC 298 | || | ||| |||||||||||| | |||||| ||||| ||||||| || || ||| Sbjct 198 AGCTAAGCTTAAGATTCTTGATCCAAACTCCAACGATATCGTCCCTCGCCTT-TTAGCTC 256 Query 299 AT-TATCAAAAATGGATGTCTCAATACGGAGAGACTTTTCTTTACTGG-AACGGAACAGA 356 || | ||| |||||||||||||||||||||||||||||||||||||| || || ||||| Sbjct 257 ATCT-TCAGCAATGGATGTCTCAATACGGAGAGACTTTTCTTTACTGGCAA-GGTACAGA 314 Query 357 GCCAAGGATATGCATCTCAGATCCTGAACTTGCAAAAAC-TATGTTGTCGAACAAGTTAG 415 ||||||| ||||||||||||||| ||| || || |||| || || ||||||||||| | Sbjct 315 GCCAAGGTTATGCATCTCAGATCATGAGCTAGC-GAAACAGATCTTATCGAACAAGTTTG 373 Query 416 GTTTCTTTGTC-AAATCAAAGGCAAGACCTGAGGCT-GTTAAACTTGTC-GGCTCCAAAG 472 |||| |||| | ||||||||| ||| |||||| | | ||||||||| | || | || | Sbjct 374 GTTTTTTTG-CTAAATCAAAGACAAAACCTGA-GATCCTTAAACTTG-CTGG-T--AATG 427 Query 473 GACTTGTCTTTATCGAA-GGTGC-TGATTGGGTTCGCCATAGAAGAATCTTGAACCCTGC 530 ||||| || || | || ||| | |||||||||||| |||||| ||||||| |||||||| Sbjct 428 GACTTATC-TTCGCAAATGGT-CTTGATTGGGTTCGGCATAGACGAATCTTAAACCCTGC 485 Query 531 TTTCTCCATCGATAGGCTCAAGATCATGA-CGACCGTGATGGTTGATTGTACGCTCAAG- 588 ||||| || || | |||||| |||||| | | ||||||| ||||| || | || Sbjct 486 ATTCTCTATGGACAAACTCAAGCTCATGACCCA-ATTGATGGTGGATTGCAC-TTTGAGA 543 Query 589 ATGTTAGAGGAGTGGAGAAAAGAGAGCACTAAG-GAAGAAACAGAGCACCCGAAGATTAA 647 ||||| || |||||| ||||| |||| | | | | ||||||||||| | | || Sbjct 544 ATGTTCGACGAGTGGGGAAAACAGAGGAAT-GGTGGCGAAACAGAGCAAGTGGTG-TT-- 599 Query 648 AAAGGAAATGAACGA-AGAGTTCCAA-AGACTAACAGCTGATATAATAGCAACCTCTGCG 705 | || | | | |||||| || ||| | || |||||||| ||||| || ||||| Sbjct 600 ----G--ATTAGC-AGAGAGTT-TAAGAGATTGACCGCTGATATCATAGCCACGGCTGCG 651 Query 706 TTTGGAAGCAGTTACGTC-GAAGGAATCGAAGTGTTTAGATCACAAATGGAGCT-TAAAA 763 |||||||||||||| | | ||||||||||||||||||| ||||||||| ||||| |||| Sbjct 652 TTTGGAAGCAGTTATG-CGGAAGGAATCGAAGTGTTTAAATCACAAATAGAGCTCCAAAA 710 Query 764 GGTGTTATACAACTTCTCTCAAC-CAAGTCTCTATCCCTGGAACT-CAGTACCTTCCTAC 821 ||||| | | ||||||| || | |||| | ||||||||| | |||||||||||||| Sbjct 711 -GTGTTGTGCTGCTTCTCT-TACTGACGTCTATTTCCCTGGAA-TCCAGTACCTTCCTAC 767 Query 822 GCCTTCGAA-CATTCGGGTATGGAAGCTGGAGAGGAAAATGGATAACTCAATTAAGAGAA 880 ||||||||| | ||| |||||||||| || |||||| || ||| ||| | || |||| Sbjct 768 GCCTTCGAATC-TTCAAATATGGAAGCTTGATAGGAAAGTGAATAGCTCGACCAAAAGAA 826 Query 881 TTATAAG-TTCGAGACTACAGTC-AAAGT-C-AG-ATTATGGAGACGATCTTCTCGGAAT 935 | || || | |||| ||| | || || | | || |||| ||| | |||||||| ||||| Sbjct 827 TCAT-AGATGCGAGGCTAAAATCGGAA-TCCAAGAATTACGGAAATGATCTTCTGGGAAT 884 Query 936 CTTGTTGAA-AGCTTACAA-CACTGAA-G-GGAAG-GAACGGAAGATGAGCATCGAAGAG 990 | |||| || ||| | ||| | || || | | | ||| ||||||||||| || ||| Sbjct 885 CATGTT-AACAGC-TGCAAGCTCT-AACGAGTCTGAGAA--AAAGATGAGCATTGATGAG 939 Query 991 ATCATACATGAATGCAGGACTTTCTTCTTCGGAGGTCACGAAACTACTTCGAATTTATTG 1050 |||||| | ||||||| ||| |||||||||| ||| |||||||||||| ||||| ||||| Sbjct 940 ATCATAGAAGAATGCAAGACGTTCTTCTTCGCAGGACACGAAACTACTGCGAATCTATTG 999 Query 1051 GCATGGACAACGATGTTGCTGAGCTTGCACCAAGATTGGCAGGAGAAACTCAGAGAAG-A 1109 |||||| || |||||||| |||||||||||||||||||| |||||||||||||||| | Sbjct 1000 ACATGGAGTACAATGTTGCTTAGCTTGCACCAAGATTGGCAAGAGAAACTCAGAGAAGAA 1059 Query 1110 GATATTCAAAGAATGCGGTAAAGAAAAAACCCCAGATTCAGAAACTTTCTCCAAACTCAA 1169 | | ||||| ||||| |||||||| |||| |||||||||||| || | | |||||||||| Sbjct 1060 G-TTTTCAATGAATGTGGTAAAGACAAAATCCCAGATTCAGAGACATGCGCCAAACTCAA 1118 Query 1170 GCTGATGAACATGGTGATCATGGAGTCGCTTCGACTTTACGGACCAGTGTCAGCTTTGGC 1229 ||||||||||||||| | |||||||| ||||| || ||||||||||||| | ||| || Sbjct 1119 ACTGATGAACATGGTGTTTATGGAGTCACTTCGTCTATACGGACCAGTGTTAAATTT-GC 1177 Query 1230 -CCGAGAAGCATCAGTAA-ATAT-AAAGTTAGGTGACCTAGAGATTCCC-AAGGGCACAA 1285 |||| |||||||| || |||| ||| ||||| ||||||||| |||| || ||||| | Sbjct 1178 TCCGATTAGCATCAG-AAGATATGAAA-TTAGGAAACCTAGAGA-TCCCTAAAGGCACGA 1234 Query 1286 CCGTAGTCATCCCGCTTCTGAAGATGCATAGCGAC-AAGACCCTTTGGGGATCCGACGCC 1344 | ||||| ||||| || |||||||||| || ||| ||| || |||||||| |||||| Sbjct 1235 CTATAGTCCTCCCGATTGTGAAGATGCACAGAGACAAAG-CCATTTGGGGAAGTGACGCC 1293 Query 1345 GACAAATTCAACCCAATGCGGTTTGCAAACGGCGTTTCCCGAGCCGCCAATCACCCAAAC 1404 |||||||||||||| |||||||||| ||||||| ||| || ||||| |||||||||||| Sbjct 1294 GACAAATTCAACCCTATGCGGTTTGAAAACGGCAATTCTCGGGCCGCTAATCACCCAAAC 1353 Query 1405 GCTCTCCTAGCATTCTCCGTCGGACCAAGAGCTTGCATTGGCCAAAACTTTGTCATGATC 1464 ||||| || || || || ||||||||||||||||||||||||||||||||| ||| || Sbjct 1354 GCTCTTCTCGCGTTTTCAATCGGACCAAGAGCTTGCATTGGCCAAAACTTTGCCATAATG 1413 Query 1465 GAAGCCAAGACTGTGCTCACCATGATTCTTCAACGGTTTCGGTTTATTAGCCTCTGTGAC 1524 ||||||||||| || || ||||||||||||||||||| ||| | | | | || || | Sbjct 1414 GAAGCCAAGACCGTTCTTGCCATGATTCTTCAACGGTTCCGGCTCAATCTC-TCCGT--C 1470 Query 1525 GAGTATAAGCACACCCCTGTGGATAACGTCACTATTCAGCCTCAGTACGGCTTACCCGTA 1584 || ||||| ||| | || | |||| || ||||| ||||||||||||||| ||||| || Sbjct 1471 GATTATAAACACGCGCCAGCGGATCACCTCACTCTTCAGCCTCAGTACGATTTACCTGTG 1530 Query 1585 ATGCTTCA 1592 |||||||| Sbjct 1531 ATGCTTCA 1538 > Ahg935681 jgi|Araly1|935681|scaffold_403669.1 Length=1421 Score = 359 bits (194), Expect = 5e-98 Identities = 591/774 (76%), Gaps = 61/774 (8%) Strand=Plus/Plus Query 326 GAGAGACTTTTCTTTACTGGAACGGAACAGAGCCAAGGATATGCATCTCAGATCCTGAAC 385 |||| || ||||| |||||||| ||||||||||| | |||||||| |||||||||||||| Sbjct 263 GAGAAACATTTCTCTACTGGAATGGAACAGAGCCGACGATATGCACCTCAGATCCTGAAC 322 Query 386 TTGCAAAAAC-TATGTTGTCGAACAAGTTAGGTTTCTT-TGTCAAATCAAAG-GCAAGAC 442 | || |||| || ||||||| |||||||||||| || || | ||||||| | |||| Sbjct 323 TAGC-TAAACAAATCTTGTCGAGCAAGTTAGGTTT-TTCGGTTAGATCAAAGAG-GAGAC 379 Query 443 CTGAGGCTG-TTAAACTTGTCGGCTCCAAAGGACTTGTCTTTATC-GAAGGTGCTGATTG 500 | || | || | | | || |||| | ||||||||| || || || || ||||||||||| Sbjct 380 CGGA-GTTGCTCATATTTTTCGG-T--AAAGGACTT-TCCTTCTCTGAGGGTGCTGATTG 434 Query 501 GGTTCGCCATAGAAGAATCTTGAACCCTGCTTTCTCCA-TCGATAGGCTCAAGATCATGA 559 |||||||||||||||||||||||||||||| ||||||| | || |||| ||| |||||| Sbjct 435 GGTTCGCCATAGAAGAATCTTGAACCCTGCATTCTCCACT-GACCGGCTTAAGGTCATGA 493 Query 560 CGACCGT-GATGGTTGATTGTACGCTCAAGATGTTAGAGGAGTGGAGAAAAGAGAGCAC- 617 ||| | |||||| ||||| || | | ||| || ||||||||||||||| ||| || Sbjct 494 CGAAA-TCGATGGTGGATTGCACATTGAGGATATTCGAGGAGTGGAGAAAACAGAACAAA 552 Query 618 TAAGGAAGAAACAGAGCACCC-GAAGATTAAAAAGGAAATGAACGAA-GAGTTCCAAAGA 675 || | ||||||||||||| | ||| || | ||| ||||| ||| ||||| | || Sbjct 553 TATG-AAGAAACAGAGCAAAATGT-GATGAAGATGGAGATGAA-GAAAGAGTTTTATCGA 609 Query 676 CTAACAGCTGATATAATAGCAACCTCTGCGTTTGGAAGCAGTTACGTCGAAGGAA-TCGA 734 |||| |||||||| ||||| ||| ||||||||||||||||||||| |||||||| | || Sbjct 610 TTAACCGCTGATATTATAGCGACCACTGCGTTTGGAAGCAGTTACGCCGAAGGAAAT-GA 668 Query 735 AGTGTTTAGATCACAAATGGAGCTTAA-AAGGTGTTATACAACTTCT-CTCAACCAA-GT 791 | | |||||| |||| | |||||| || |||| | |||||| | || |||| || Sbjct 669 AATCTTTAGAGCACATGTAGAGCTTCGGAAT-TGTTGTGTTACTTCTGC-CA-CCAAAGT 725 Query 792 CT-CTATCC-CTGGAACTCAGTACCTTCCTACGCCTTCGAA-CATTCGGGTATGGAAGCT 848 | | |||| | |||| |||||||||||||| |||| ||| | |||| |||||||||| Sbjct 726 GTTC-ATCCAC-GGAAAACAGTACCTTCCTACACCTTTGAATC-TTCGTATATGGAAGCT 782 Query 849 GGAGAGGAAAATGGATAACTCAATTAAGAGAATTATAAGTTCGAGACTACAG-TCAAA-G 906 || |||||| | | ||| | | | |||| || | || || |||| | | ||| | Sbjct 783 CGATAGGAAAGTAAAGAAC--A-TGATCAGAAGAATCA-TT-GATACTAG-GCTAAAATG 836 Query 907 TCAGATT-ATGGAGACGAT---CTTCTCGGAATCTTGTTGAAA-GCTTACAACA-CTGAA 960 ||| | ||||||| ||| ||||| |||||| |||| ||| ||| |||| ||||| Sbjct 837 GAAGAATCATGGAGATGATGATCTTCTAGGAATCATGTT-AAACGCTG-CAACCTCTGAA 894 Query 961 GGGAA-G-GAACGGAAGATGAGCATCGAAGAGATCATACATGAATGCAGGACTTTCTTC- 1017 | | ||| ||| ||||||| || ||||||||| | ||||||| | ||||||| Sbjct 895 GATCCCGAGAAA--AAGTTGAGCATAGATGAGATCATAGAAGAATGCAAAAATTTCTTCA 952 Query 1018 T-TCGGAGGTCACGAAACTACTTCGAATTTATTGGCATGGACAACGATGTTGCT 1070 | || ||| |||| ||||||||||| ||||||||||||||| ||||||||||| Sbjct 953 TATC--AGGACACGGAACTACTTCGATTTTATTGGCATGGACTACGATGTTGCT 1004 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69628967860 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5