BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G47240.1 Length=2407 Score E Sequences producing significant alignments: (Bits) Value Ahg935712 jgi|Araly1|935712|scaffold_403700.1 3219 0.0 Ahg322371 jgi|Araly1|322371|fgenesh1_pm.C_scaffold_4002428 2377 0.0 Ahg913565 jgi|Araly1|913565|Al_scaffold_0001_3819 169 1e-40 > Ahg935712 jgi|Araly1|935712|scaffold_403700.1 Length=2023 Score = 3219 bits (1743), Expect = 0.0 Identities = 1928/2020 (95%), Gaps = 2/2020 (0%) Strand=Plus/Plus Query 194 GAGAGAGAAATAGAGAATGAAGTCTTTTGCGGCTAAGGTAGAAGAGGGAGTTAAAGGAAT 253 |||||||| |||||||||||||||||| |||||||||| |||||||||||||||||| || Sbjct 5 GAGAGAGAGATAGAGAATGAAGTCTTTCGCGGCTAAGGCAGAAGAGGGAGTTAAAGGGAT 64 Query 254 AGACGGAAAGCCGTCGGTAGGTCCGGTGTACCGGAATCTTCTGTCGGAAAAAGGTTTTCC 313 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 65 AGACGGAAAGCCGTCAGTAGGTCCGGTGTACCGGAATCTCCTGTCGGAAAAAGGTTTTCC 124 Query 314 TCCGATTGATTCTGAGATCACCACTGCTTGGGACATTTTCAGTAAATCAGTGGAGAAATT 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 TCCGATTGATTCTGAGATCACCACTGCTTGGGACATTTTCAGTAAATCAGTGGAGAAATT 184 Query 374 CCCTGACAATAATATGCTTGGATGGCGTCGAATTGTTGATGAGAAGGTTGGACCATATAT 433 ||||||||| |||||||||||||||||||||| ||||||||||||||| ||||| ||||| Sbjct 185 CCCTGACAACAATATGCTTGGATGGCGTCGAACTGTTGATGAGAAGGTGGGACCGTATAT 244 Query 434 GTGGAAAACGTACAAGGAAGTATACGAAGAAGTTTTGCAGATTGGCTCTGCACTACGAGC 493 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 245 GTGGAAAACGTACAAGGAAGTATACGAAGAAGTTTTGCAGATCGGTTCTGCACTACGAGC 304 Query 494 CGCCGGAGCTGAACCTGGGAGTCGAGTGGGGATCTACGGTGTTAATTGTCCTCAGTGGAT 553 || |||||||||||||||| |||||||||||||||||| |||||||||| |||||||| Sbjct 305 CGTCGGAGCTGAACCTGGGTCTCGAGTGGGGATCTACGGAATTAATTGTCCGCAGTGGAT 364 Query 554 CATAGCAATGGAGGCTTGTGCAGCTCACACTCTAATCTGTGTACCTCTATATGATACATT 613 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 365 CATAGCAATGGAGGCTTGTGCAGCTCACACTCTAATATGTGTACCTCTATATGATACATT 424 Query 614 GGGTTCAGGAGCAGTCGATTACATTGTAGAGCATGCGGAAATCGACTTTGTGTTTGTCCA 673 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 425 GGGTTCAGGAGCAGTCGATTACATTGTAGAGCATGCGGAAATCGACTTTGTGTTTGTCCA 484 Query 674 AGACACCAAAATTAAAGGACTTCTTGAGCCAGATTGCAAATGTGCTAAACGGCTAAAAGC 733 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 485 AGACACCAAAATTAAAGGACTCCTTGAGCCAGATTGCAAATGTGCTAAACGGCTAAAAGC 544 Query 734 TATAGTTTCCTTCACTAACGTGAGCGACGAGCTTAGCCACAAGGCTTCAGAAATTGGAGT 793 |||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||| Sbjct 545 TATAGTTTCCTTCACTAACGTGAGTGCCGAGCTTAGCCACAAGGCTTCAGAGATTGGAGT 604 Query 794 CAAAACATACTCCTGGATCGATTTTCTCCATATGGGACGTGAGAAACCGGAAGACACGAA 853 |||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||| Sbjct 605 CAAAACATACTCATGGATCGATTTTCTACATATGGGACGTGAGAAACCAGAAGAGACGAA 664 Query 854 CCCGCCTAAGGCGTTTAACATATGCACCATAATGTACACCAGCGGCACAAGCGGTGATCC 913 |||||||||| |||||||||||||||||||||||||||| || ||||| ||||||||||| Sbjct 665 CCCGCCTAAGTCGTTTAACATATGCACCATAATGTACACGAGTGGCACGAGCGGTGATCC 724 Query 914 TAAAGGTGTGGTTTTGACTCACCAAGCGGTCGCGACTTTTGTTGTTGGGATGGATCTCTA 973 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 725 TAAAGGTGTGGTTTTGACTCACCAAGCGGTGGCGACTTTTGTTGTTGGGATGGATCTCTA 784 Query 974 TATGGACCAGTTTGAAGATAAGATGACACATGATGATGTGTATCTCTCCTTCTTGCCCTT 1033 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 785 CATGGACCAGTTCGAAGATAAGATGACACATGACGATGTGTATCTCTCCTTCTTGCCGTT 844 Query 1034 GGCTCATATTCTTGACCGTATGAACGAGGAATACTTCTTTC-GCAAAGGCGCTTCCGTCG 1092 |||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||| Sbjct 845 GGCTCATATTCTTGACCGTATGAATGAGGAGTACTT-TTTCCGCAAAGGCGCTTCCGTCG 903 Query 1093 GCTATTACCATGGAAATTTGAACGTGTTACGTGACGATATTCAAGAACTGAAACCGACTT 1152 |||||||||||||| ||||||| ||||||||||| || ||||| ||| |||||||||||| Sbjct 904 GCTATTACCATGGAGATTTGAATGTGTTACGTGATGACATTCAGGAATTGAAACCGACTT 963 Query 1153 ATCTAGCTGGAGTACCAAGAGTGTTTGAGAGAATCCATGAGGGGATTCAAAAGGCTCTTC 1212 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 964 ATCTAGCCGGAGTACCAAGAGTGTTTGAGAGAATCCATGAGGGGATTCAAAAGGCTCTTC 1023 Query 1213 AAGAACTTAACCCAAGAAGGAGATTCATCTTCAATGCTCTCTACAAACACAAGCTTGCGT 1272 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 1024 AAGAACTTAATCCAAGAAGGAGACTCATCTTCAATGCTCTCTACAAACACAAGCTTGCAT 1083 Query 1273 GGTTGAATCGTGGGTACTCTCATAGTAAAGCTTCACCCATGGCTGATTTCATTGCTTTCA 1332 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1084 GGATGAATCGTGGATACTCTCATAGTAAAGCTTCACCCATGGCTGATTTCATTGCTTTCA 1143 Query 1333 GAAAGATTAGAGACAAATTGGGAGGTCGCATCCGGTTGCTAGTATCTGGAGGAGCACCTT 1392 |||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 1144 GAAAGATTAGGGACAAATTGGGAGGTCGGATCCGGTTGCTAGTATCTGGAGGGGCACCTT 1203 Query 1393 TGAGCCCTGAGATTGAAGAGTTTTTGAGAGTTACTTGTTGTTGCTTTGTCGTTCAAGGCT 1452 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1204 TGAGCCCTGAGATTGAAGAGTTCTTGAGAGTTACTTGTTGTTGCTTTGTCGTCCAAGGCT 1263 Query 1453 ACGGTCTAACGGAGACACTTGGAGGAACGGCTTTGGGTTTCCCGGACGAGATGTGTATGC 1512 |||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| Sbjct 1264 ACGGCCTAACGGAGACGCTTGGAGGTACGGCTTTGGGTTTCCCGGATGAGATGTGTATGC 1323 Query 1513 TAGGGACAGTCGGTATTCCAGCGGTTTACAACGAGATACGGCTTGAAGAGGTGTCTGAAA 1572 |||| |||||||||||||| |||||||||||||||||||| ||||| |||||| |||||| Sbjct 1324 TAGGAACAGTCGGTATTCCGGCGGTTTACAACGAGATACGACTTGAGGAGGTGGCTGAAA 1383 Query 1573 TGGGCTATGACCCGCTCGGAGAAAATCCGGCAGGAGAGATCTGTATAAGAGGACAATGTA 1632 ||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||| | Sbjct 1384 TGGGCTATGACCCACTCGGGGAAAATCCAGCAGGGGAGATCTGTATAAGAGGACAATGCA 1443 Query 1633 TGTTTTCAGGGTATTACAAGAACCCTGAACTCACTGAAGAAGTCATGAAAGATGGATGGT 1692 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1444 TGTTTTCTGGGTATTACAAGAACCCTGAACTCACTGAAGAAGTCATAAAAGATGGATGGT 1503 Query 1693 TCCACACAGGAGATATAGGTGAGATTCTTCCAAACGGAGTACTCAAGATCATCGATCGTA 1752 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1504 TCCACACAGGAGATATAGGTGAGATTCTTCCAAACGGAGTACTCAAGATCATCGATCGTA 1563 Query 1753 AAAAGAATCTGATCAAACTTTCTCAAGGAGAATATGTTGCTCTCGAGCATTTGGAAAACA 1812 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1564 AGAAGAATCTGATCAAACTCTCTCAAGGAGAATATGTTGCTCTCGAGCATTTGGAAAACA 1623 Query 1813 TCTTCGGGCAAAACTCTGTTGTCCAAGATATATGGGTTTATGGAGACAGCTTCAAATCTA 1872 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1624 TCTTCGGCCAAAACTCTGTTGTCCAAGATATATGGGTTTACGGAGACAGCTTCAAATCTA 1683 Query 1873 TGCTTGTCGCGGTGGTTGTTCCCAACCCAGAAACCGTCAACAGGTGGGCTAAAGATCTCG 1932 |||||||||| ||||||||||||||||| |||||||| ||| |||||||||||||||||| Sbjct 1684 TGCTTGTCGCCGTGGTTGTTCCCAACCCGGAAACCGTTAACCGGTGGGCTAAAGATCTCG 1743 Query 1933 GTTTTACTAAACCATTCGAAGAACTCTGTTCTTTCCCGGAACTAAAAGAACACATCATTT 1992 |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| Sbjct 1744 GTTTTACTAAACCACTCGAAGAACTCTGTTCTTTCCCGGAGCTTAAAGAACACATCATTT 1803 Query 1993 CAGAACTGAAGTCCACGGCAGAAAAGAACAAGCTAAGAAAGTTTGAGTACATCAAAGCGG 2052 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1804 CAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTTGAGTACATCAAAGCGG 1863 Query 2053 TGACAGTGGAGACAAAACCTTTCGACGTAGAGAGAGACTTAGTGACTGCGACGCTCAAGA 2112 || | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1864 TGGCGGTGGAGACAAAACCTTTCGACGTAGAGAGAGACTTAGTGACTGCGACACTCAAGA 1923 Query 2113 ATCGGAGGAACAATCTTCTCAAATATTATCAGGTGCAAATCGACGAAATGTACCGCAAAT 2172 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1924 ATCGGAGGAACAATCTTCTCAAATATTATCAGGTACAAATCGACGAAATGTACCGCAAAT 1983 Query 2173 TGGCCTCAAAGAAAATCTGAAAGTGTTGCGATGATGTGTG 2212 |||| |||||||||||||||||||| ||| |||||||||| Sbjct 1984 TGGCGTCAAAGAAAATCTGAAAGTGCTGCAATGATGTGTG 2023 > Ahg322371 jgi|Araly1|322371|fgenesh1_pm.C_scaffold_4002428 Length=1983 Score = 2377 bits (1287), Expect = 0.0 Identities = 1765/1997 (88%), Gaps = 28/1997 (1%) Strand=Plus/Plus Query 210 ATGAAGTCTTTTGCGGCTAAGGTAGAAGAGGGAGTTAAA-GGAATAGACGGAAAGCCGTC 268 ||||||| ||| ||||| ||||| ||||| ||||||||| || | ||| |||||||| || Sbjct 1 ATGAAGTGTTTCGCGGCAAAGGTGGAAGAAGGAGTTAAAGGGGA-AGATGGAAAGCCATC 59 Query 269 GGTAGGTCCGGTGTACCGGAATCTTCTGTCGGAAAAAGGTTTTCCT-C-CGATTGATTCT 326 |||||| |||||||||||||||||| ||||||| |||||||||||| | ||| |||||| Sbjct 60 GGTAGGCCCGGTGTACCGGAATCTTTTGTCGGAGAAAGGTTTTCCTCCTCGA--GATTCT 117 Query 327 GAGATCACCACTGCTTGGGACATTTTCAGTAAATCAGTGGAGAAATTCCCTGACAATAAT 386 || ||||||||| |||||||||||||||||||||| ||||||||||| ||||| || || Sbjct 118 GATATCACCACTACTTGGGACATTTTCAGTAAATCTGTGGAGAAATTTCCTGATAACAAG 177 Query 387 ATGCTTGGATGGCGTCGAATTGTTGATGAGAAGGTTGGACCATATATGTGGAAAACGTAC 446 |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct 178 ATGCTTGGATGGCGTCAAATTGTGGATGAGAAGGTTGGACCGTATATGTGGAAAACGTAC 237 Query 447 AAGGA-AGTATACGAAGAAGTTTTGC-AGATTGGCTCTGCACTACGAGCCGCCGGAGCTG 504 ||||| | |||||||||||||| | | ||| || |||||||||||||||| |||||||| Sbjct 238 AAGGATA-TATACGAAGAAGTTCT-CTTGATCGGTTCTGCACTACGAGCCGTCGGAGCTG 295 Query 505 AACCTGGGAGTCGAGTGGGGATCTACGGTGTTAATTGTCCTCAGTGGATCATAGCAATGG 564 |||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||| Sbjct 296 AACCTGGGTCTCGAGTGGGGATCTATGGAGCTAATTGTCCTCAGTGGATCATAGCAATGG 355 Query 565 AGGCTTGTGCAGCTCACACTCTAATCTGTGTACCTCTATATGATACATTGGGTTCAGGAG 624 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 356 AGGCTTGTGCAGCTCACACTCTAATATGTGTACCTCTATATGATACATTGGGTTCAGGAG 415 Query 625 CAGTCGATTACATTGTAGAGCATGCGGAAATCGACTTTGTGTTTGTCCAAGA-CACCAAA 683 |||||||||| || || || || ||||||||||| |||||||| ||||| || ||||||| Sbjct 416 CAGTCGATTATATCGTTGATCACGCGGAAATCGATTTTGTGTTCGTCCA-GAACACCAAA 474 Query 684 ATTAAAGGACTTCTTGAGCCAGATTGCAAATGTGCTAAACGGCTAAAAGCTATAGTTTCC 743 |||| ||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 475 ATTAGAGGACTTCTTGAGCCAGATTGCAAAGGTGCAAAACGTCTAAAAGCTATAGTTTCT 534 Query 744 TTCACTAACGTGAGCGACGAGCTTAGCCACAAGGCTTCAGAAATTGGAGTCAAAACATAC 803 |||||||| ||| |||| || | ||| ||||||||| |||||||||||||||| ||||| Sbjct 535 TTCACTAATGTGGGCGAAGAACAGAGCTACAAGGCTTTAGAAATTGGAGTCAAAGCATAC 594 Query 804 TCCTGGATCGATTTTCTCCATATGGGACGTGAGAAACCGGAAGACACGAACCCGCCTAAG 863 || ||| ||||||||||||||||||||| ||||| ||| |||| || ||||||||||| Sbjct 595 TCGTGGCTCGATTTTCTCCATATGGGACAAGAGAAGCCGAAAGAGACAAACCCGCCTAAA 654 Query 864 GCGTTTAACATATGCACCATAATGTACACCAGCGGCACAAGCGGTGATCCTAAAGGTGTG 923 ||| | || | ||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 655 CCGTCTGACGTGTGCACCATAATGTACACGAGCGGCACAAGCGGTGAACCTAAAGGTGTG 714 Query 924 GTTTTGACTCACCAAGCGGTCGCGACTTTTGTTGTTGGGATGGATCTCTA-TATGGACCA 982 ||||||| ||| |||||| |||||||| || ||||| ||||||||| | ||||||| Sbjct 715 CTTTTGACCCACGAAGCGGCCGCGACTTGCGTCATTGGGGTGGATCTCTGCT-TGGACCA 773 Query 983 GTTTGAAGATAAGATGACACATGATGATGTGTATCTCTCCTT-CTTGCCCTTGGCTCATA 1041 ||| || || |||||||||||||| |||||||||||||| || || ||| |||||||||| Sbjct 774 GTTCGAGGACAAGATGACACATGAAGATGTGTATCTCTCGTTTCT-GCCGTTGGCTCATA 832 Query 1042 TTCTTGACCGTATGAACGAGGAATACTTCTTTCGCAAAGGCGCTTCCGTCGGCTATTACC 1101 | || |||||| || |||||||| ||||| || |||||||||||||| |||||||||| Sbjct 833 TCCTCGACCGTGCAAATGAGGAATATTTCTTCCGTAAAGGCGCTTCCGTTGGCTATTACC 892 Query 1102 ATGGAAATTTGAACGTGTTACGTGACGATATTCAAGAACTGAAACCGACTTATCTAGCTG 1161 ||||| ||||||| | ||||| || ||||||||||||||||||||||||| ||| || | Sbjct 893 ATGGAGATTTGAATGCGTTACACGATGATATTCAAGAACTGAAACCGACTTTTCTTGCGG 952 Query 1162 GAGTACCAAGAGTGTTTGAGAGAATCCATGAGGGGATTCA-AAAGGCTCTTCAAGAACTT 1220 |||| |||||||| || ||||| || |||| |||||||| |||| ||||||| || ||| Sbjct 953 GAGTTCCAAGAGTCTTCGAGAGGATTTATGATGGGATTCAGAAAG-CTCTTCAGGAGCTT 1011 Query 1221 AACCCAAGAAGGAGATTCATCTTCAATGCTCTCTACAAACACAAGCTTGCGTGGTTGAAT 1280 ||||||||||| ||| |||||||| |||||||||| ||| |||| ||||||||| ||||| Sbjct 1012 AACCCAAGAAGAAGACTCATCTTCTATGCTCTCTATAAATACAAACTTGCGTGGATGAAT 1071 Query 1281 CGTGGGTACTCTCATAGTAAAGCTTCACCCATGGCTGATTTCATTGCTTTCAGAAAGATT 1340 ||||| || ||||| || |||||||||||||||||||| ||||| ||||||| ||||||| Sbjct 1072 CGTGGATATTCTCACAGCAAAGCTTCACCCATGGCTGACTTCATAGCTTTCAAAAAGATT 1131 Query 1341 AGAGACAAATTGGGAGGTCGCATCCGGTTGCTAGTATCTGGAGGAGCACCTTTGAGCCCT 1400 | | || |||| |||||| | || |||||||||||||||||||||||||| |||| | | Sbjct 1132 AAAAACCAATTAGGAGGTAGAATTCGGTTGCTAGTATCTGGAGGAGCACCACTGAGTCTT 1191 Query 1401 GAGATTGAAGAGTTTTTGAGAGTTACTTGTTGTTGCTTTGTCGTTCAAGGCTACGGTCTA 1460 ||||| |||||||| ||||||||||||| ||||||||| |||||||||||||| |||||| Sbjct 1192 GAGATCGAAGAGTTCTTGAGAGTTACTTCTTGTTGCTTCGTCGTTCAAGGCTATGGTCTA 1251 Query 1461 ACGGAGACACTTGGAGGAACGGCTTTGGGTTTCCCGGACGAGATGTGTATGCTAGGGACA 1520 |||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||| Sbjct 1252 ACGGAGACGCTTGGAGGAACAACTTTGGGTTACCCGGACGAGATGTGTATGCTCGGGACG 1311 Query 1521 GTCGGTATTCCAGCGGTTTACAACGAGATACGGCTTGAAGAGGTGTCTG-AAATGG-GCT 1578 |||||| |||||||||||||||| |||||||||||||| ||||| || | |||||| | | Sbjct 1312 GTCGGTGTTCCAGCGGTTTACAATGAGATACGGCTTGAGGAGGT-TCCGGAAATGGAG-T 1369 Query 1579 ATGACCCGCTCGGAGAAAATCCGGCAGGAGAGATCTGTATAAGAGGACA-ATGTATGTTT 1637 ||||||| | ||||||||||||||||| |||||||||||||||||| | |||| ||||| Sbjct 1370 ATGACCCATTGGGAGAAAATCCGGCAGGGGAGATCTGTATAAGAGGA-ATATGTCTGTTT 1428 Query 1638 TCAGGGTATTACAAGAACCCTGAACTCACTGAAGAAGTCATGAAAGATGGATGGTTCCAC 1697 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1429 TCTGGGTATTACAAGAACCCTGAACTCACTGAAGAAGTCATGAAAGACGGATGGTTCCAT 1488 Query 1698 ACAGGAGATATAGGTGAGATTCTTCCAAACGGAGTACTCAAGATCATCGATCGTAAAAAG 1757 |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||| Sbjct 1489 ACAGGAGACATAGGTGAGATTCTTCCAAACGGATTACTTAAGATCATCGATCGTAAGAAG 1548 Query 1758 AATCTGATCAAACTTTCTCAAGGAGAATATGTTGCTCTCGAGCATTTGGAAAACATCTTC 1817 || ||||||||||| ||||||||||||||||||||||| || |||||||||| ||||| | Sbjct 1549 AACCTGATCAAACTCTCTCAAGGAGAATATGTTGCTCTTGAACATTTGGAAAGCATCTAC 1608 Query 1818 GGGCAAAACTCTGTTGTCCAAGATATATGGGTTTATGGAGACAGCTTCAAATCTATGCTT 1877 || |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1609 GGACAAAACCCTATTGTCCAAGATATATGGGTTTATGGAGACAGCTTCAAATCTATGCTT 1668 Query 1878 GTCGCGGTGGTTGTTCCCAACCCAGAAACCGTCAACAGGTGGGCTAAAGATCTCGGTTTT 1937 || |||||| |||||||||| ||||||||| | ||| ||||||||||||||||||||||| Sbjct 1669 GTGGCGGTGATTGTTCCCAATCCAGAAACCCTAAACCGGTGGGCTAAAGATCTCGGTTTT 1728 Query 1938 ACTAAACCATTCGAAGAACTCTGTTCTTTCCCGGAACTAAAAGAACACATCATTTCAGAA 1997 ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1729 ACTAAACCACTCGAAGAACTCTGTTCTTTCCCGGAGCTTAAAGAACACATCATTTCAGAA 1788 Query 1998 CTGAAGTCCACGGCAGAAAAGAACAAGCTAAGAAAGTTTGAGTACATCAAAGCGGTGACA 2057 ||||||||||||||||| |||| ||||||||| | |||||||||||| ||||| ||||| Sbjct 1789 CTGAAGTCCACGGCAGAGAAGAGCAAGCTAAGCAGGTTTGAGTACATAAAAGCTGTGACG 1848 Query 2058 GTGGAGACAAAACCTTTCGACGTAGAGAGAGACTTAGTGACTGCGACGCTC-AAGAATCG 2116 ||||||||||||||||| || |||||||||||||| ||||||||||| || || ||| | Sbjct 1849 GTGGAGACAAAACCTTTTGATGTAGAGAGAGACTTGGTGACTGCGAC-CTTGAAAAATAG 1907 Query 2117 GAGGAACAATCTTCTCAAATATTATCAGGTG-CAAATCGACGAAATGTACCGCAAATTGG 2175 ||||| |||||||||||| ||||||||||| ||| |||||||||||||||| ||||||| Sbjct 1908 GAGGACCAATCTTCTCAAGTATTATCAGGTATCAA-TCGACGAAATGTACCGAAAATTGG 1966 Query 2176 CCTCAAAGAAAATCTGA 2192 | |||||| || |||| Sbjct 1967 CGGCAAAGAGAAGCTGA 1983 > Ahg913565 jgi|Araly1|913565|Al_scaffold_0001_3819 Length=195 Score = 169 bits (91), Expect = 1e-40 Identities = 99/103 (96%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1977 AAAGAACACATCATTTCAGAACTGAAGTCCACGGCAGAAAAGAACAAGCTAAGAAAGTTT 2036 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 79 AAAGAACACATCATTTCAGAACTGAAGTCCACGGCAGAGAAGAACAAGCTAAGAAAGTTT 138 Query 2037 GAGTACATCAAAGCGGTGACAGTGGAGACAAAACCTTTCGACG 2079 |||||||||||||||||| | |||||| ||||||||||||||| Sbjct 139 GAGTACATCAAAGCGGTGGCGGTGGAGGCAAAACCTTTCGACG 181 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 90692873345 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5