BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G47860.3 Length=2112 Score E Sequences producing significant alignments: (Bits) Value Ahg483974 jgi|Araly1|483974|fgenesh2_kg.4__3034__AT2G47860.1 2615 0.0 Ahg497182 jgi|Araly1|497182|fgenesh2_kg.39__2__AT2G47860.1 2604 0.0 > Ahg483974 jgi|Araly1|483974|fgenesh2_kg.4__3034__AT2G47860.1 Length=1884 Score = 2615 bits (1416), Expect = 0.0 Identities = 1650/1757 (94%), Gaps = 39/1757 (2%) Strand=Plus/Plus Query 261 AGTTTCCTCTCGTCTCTCGGAGTGGAAGAATCCGGAAACTTGTTCTGGAATCAAAAGACA 320 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 158 AGTTTCCCCTCGTCTCTCGGAGTGGAAGAATCCGGAAACTTGTTCTGGAATCAAAAGACA 217 Query 321 CGAACCTGAACCTAGCCGCT-GTTCCAGGCGGCTCAGAATCGTTCGAGCTTGCTGCAAAG 379 |||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct 218 AGAACCTTAACCTAGCCG-TAGTTCCAGGCGGCTCAGAATCGTTCGAGCTCGCTGCAAAG 276 Query 380 TTCTGCTACGGCGTTGGCGTCCAATAT-AACTCGTCCAACATTGCGGCGCTGCGATGCGT 438 ||||||||||||||||||||||||| | |||||||||||||||||||| |||| ||||| Sbjct 277 TTCTGCTACGGCGTTGGCGTCCAAT-TCAACTCGTCCAACATTGCGGCTTTGCGGTGCGT 335 Query 439 GGCTCATTACCTGGAGATGACAGAAGACTTGTCAGAGAAGAACCTCGAGGCGAGAACAGA 498 |||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct 336 GGCTCATTACCTTGAGATGACAGAAGAGTTGTCGGAGAAGAACCTGGAGGCGAGAACAGA 395 Query 499 GGCCTACCTGAAAGACTCCAT-TTTCAATGACATATCGAATTCGATCACTGTTCTTCACT 557 ||||||||| ||||||||||| ||| |||||||| ||||||||||||||||||||||||| Sbjct 396 GGCCTACCTCAAAGACTCCATCTTT-AATGACATTTCGAATTCGATCACTGTTCTTCACT 454 Query 558 CCTGCGAGAGGCTACTGCCTGTAGCTGAAGAGATCAACCTCGTCGGGAGGCTGGTCAACG 617 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 455 CCAGCGAGAGGCTACTGCCTGTAGCTGAAGAGATCAACCTCGTCGGGAGGCTGGTCAACG 514 Query 618 CAATCGCTGTAAACGCCTGCAAAGAACAGCTAGCCTCTGGTTTGCTCAAGCTTGATCAGA 677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 515 CAATCGCTGTAAACGCCTGCAAAGAACAGCTAGCCTCTGGTTTGCTCAAGCTTGATCAGA 574 Query 678 GTTTCAGCTGCGGCGTCCCGGAGACTGCGAAACCTTGTGACTGGTGGGGTCGCTCTCTTC 737 ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| Sbjct 575 ATTTCAGCTGCGGCGTGCCGGAGACTGAGAAACCTTGTGACTGGTGGGGGCGCTCTCTTC 634 Query 738 CCATCCTCAAGCTTGATTTCTTCCAGAGAGTTCTCTCCGCCATGAAATCCAAAGGTCTCA 797 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 635 CCATCCTCAAGCTCGATTTCTTCCAGAGAGTTCTCTCCGCCATGAAATCCAAAGGTCTCA 694 Query 798 ATCACGACATTATCAGTGACATCCTTATGAGCTACGCTCGCAAATCACTGCAGATCATCA 857 ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| Sbjct 695 ATCACGACATTATCAGTGACATCCTCATGAGCTACGCTCGCAAGTCACTGCAAATCATCA 754 Query 858 GAGAACCGAATCTCGTCAAATCAGATTCCGATCTTCAGAGGAAACAGCGAATCGTCCTTG 917 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 755 GAGAACCGAGTCTCGTCAAATCAGATTCCGATCTGCAGAGGAAACAGCGAATCGTCCTTG 814 Query 918 AAGCGGTCGTCGGGCTCCTCCCAACGCAAGCGAACAAAAGCTCGATTCCGATCTCGTTCC 977 |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 815 AAGCGGTCGTGGGGCTCCTCCCAACGCAAGCGAACAAAAGCTCAATTCCGATATCGTTCC 874 Query 978 TCTCTAGCTTGTTGAAGACCGCTATAGGATCTGGCACCTCCGTCTCTTGCAGATCCGATC 1037 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 875 TCTCTAGCTTGTTGAAGACCGCTATAGGATCTGGAACCTCCGTCTCTTGCAGATCGGATC 934 Query 1038 TGGAGAGACGGATCAGCCACCTGCTCGACCAGGCCATCCTTGAAGACATCCTTATTCCGG 1097 ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| Sbjct 935 TGGAGAGACGGATCAGCCACCAGCTCGACCAGGCGATCCTGGAAGACATCCTTATTCCGG 994 Query 1098 CGAACATCGGCGCCATGTACGACACCGACTCGGTGCAGAGGATTTTCTCAATGTTCTTGA 1157 ||||||| |||||||||||||||||||||||||||||||| || ||||| |||||| ||| Sbjct 995 CGAACATGGGCGCCATGTACGACACCGACTCGGTGCAGAGAATCTTCTCCATGTTCCTGA 1054 Query 1158 ACCTTGACGAGTGCGAGTACAGAGATGATGATGACGACGAGGA-G--G-AC--GCGGTGG 1211 |||||||||||||||| |||||||||||||| ||||||||||| | | | ||||||| Sbjct 1055 ACCTTGACGAGTGCGACTACAGAGATGATGACGACGACGAGGACGCTGGAGATGCGGTGG 1114 Query 1212 ACGAGAGCGAGATGGCCATGTACGATTTCGAGGGGGCTGAGTCACCGAAACAGAGCTCCA 1271 |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct 1115 ACGAGAGCGAGATGGCGATTTACGATTTCGAGGGGGCTGAGTCTCCGAAACAGAGCTCCA 1174 Query 1272 TCTTCAAGGTGTCGAAGCTGATGGATAGTTATCTCGCTGAGGTGGCTCTGGACTCGAGCC 1331 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1175 TCTTCAAGGTGTCGAAGCTGATGGATAGTTATCTCGCTGAGGTGGCTCTCGACTCGAGCC 1234 Query 1332 TTCCTCCCTCCAAGTTTATAGCACTCGCAGAGCTTCTCCCTGACCATGCTCGCGTCGTCT 1391 | ||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 1235 TCCCTCCCTCCAAATTCATAGCTCTCGCAGAGCTTCTCCCTGACCATGCTCGCGTCCTCT 1294 Query 1392 GCGATGGCCTCTACCGAGCCGTTGATATCTTCCTCAAGGTTCACCCCCACATGAAAGATT 1451 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1295 GCGATGGTCTCTACCGAGCCGTTGATATCTTCCTCAAGGTTCATCCCCACATGAAAGATT 1354 Query 1452 CGGAACGTTACCGTCTCTGCAAGACAGTCAGCTGTAAGAAACTGTCGCAGGACGCAAGCA 1511 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1355 CAGAACGTTACCGTCTCTGCAAGACAGTCAGCTGTAAGAAACTGTCGCAGGACGCAAGCA 1414 Query 1512 GCCACGCGGCGCAAAACGAGAGACTTCCGGTTCAGATTGCGGTTCAAGTCCTGTTCTACG 1571 |||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1415 GCCATGCGGCGCAAAATGAGAGGCTTCCGGTTCAGATTGCTGTTCAAGTCCTGTTCTACG 1474 Query 1572 AACAGACACGGCTCAAGAACGCCATGACCAGCGGCGGTGGCACAGGCGGTTCGAACCAAA 1631 ||||||||||||||||||||||||||||||||||||||||||| | | | | ||| Sbjct 1475 AACAGACACGGCTCAAGAACGCCATGACCAGCGGCGGTGGCAC-GA-G---C---C-AAA 1525 Query 1632 GCCAGTTCTTCTTGTTCCCAAACCGCTCGGGAAGCGGGATGGCAAGCGGAGCCATCTCGC 1691 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 1526 GCCAGTTCTTCTTGTTCACAAACCGCTCGGGAAGCGGGATGGCAAGCGGAGCGATCTCGC 1585 Query 1692 CGAGGGACAACTATGCATCAGTGAGAAGAGAGAACAGAGAGCTGAGACTAGAGGTGGCCA 1751 || ||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| Sbjct 1586 CGCGGGACAACTATGCGTCAGTGAGAAGAGAGAACAGAGAGCTGAGACTGGAAGTGGCCA 1645 Query 1752 GGATGAGGATGAGGCTAACGGACCTGGAGAAAGATCATGTATCGATGAAGAGAGACTTCG 1811 ||||||||||||||||||||||||| ||||| |||||||| |||||||||| |||||||| Sbjct 1646 GGATGAGGATGAGGCTAACGGACCTCGAGAAGGATCATGTTTCGATGAAGAAAGACTTCG 1705 Query 1812 TGAAGCCGCAGAGCAGGAGGAGGCGTTATGGAATGTTGAGGAAGCTCTCGAGAGGTCTGA 1871 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1706 TGAAGCCGCAGAGCAGGAGGAGGCGTTATGGAATGTTGAGGAAGCTCTCAAGAGGTCTGA 1765 Query 1872 ACAAGTTGAACGCAATCGTTTTGAGATTTAGGAGCAGCCAAAGTGTTGCCAGTAGCGGTA 1931 |||||||||||||||||||||||||||||||||||||||||||| | ||| | Sbjct 1766 ACAAGTTGAACGCAATCGTTTTGAGATTTAGGAGCAGCCAAAGT------A--AGC---A 1814 Query 1932 AAAAGCATACGGAGGAGAAAACGAATTCGGAAAGACGATTCATGTTTCAGAAGAGAAGAT 1991 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1815 -------TACGGAGGAGAAAACGAATTCGGAAAGACGATTCATGTTTCAGAAGAGAAGAT 1867 Query 1992 GTCACTCTGTTTCTTGA 2008 ||||||||||||||||| Sbjct 1868 GTCACTCTGTTTCTTGA 1884 Score = 257 bits (139), Expect = 2e-67 Identities = 155/162 (96%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 32 ATGGGTGTTGTTACTGTTCCTGAGTCTAATAAGCAAAGTGTTGCTGCTAAAAGAGCGTTT 91 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1 ATGGGTGTTGTTACTGTTCCTGAGTC---TAAGCAAAGTGTTGCTGCTAAAAGAGCGTTT 57 Query 92 CGTCCAAGTTCCAGTATCAGACACACTCCTCAATGGCCTGTCTCGGACGTTACGAGTGAC 151 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 CGTCCAAGTTCCAGCATCAGACACACTCCTCAATGGCCTGTCTCGGACGTTACGAGTGAC 117 Query 152 TTAACCATTGAAGTCGGCTCTGCGACCTTTTCCCTTCACAAG 193 |||||||| |||||||||||||| | |||||||||||||||| Sbjct 118 TTAACCATCGAAGTCGGCTCTGCCAGCTTTTCCCTTCACAAG 159 > Ahg497182 jgi|Araly1|497182|fgenesh2_kg.39__2__AT2G47860.1 Length=1884 Score = 2604 bits (1410), Expect = 0.0 Identities = 1648/1757 (94%), Gaps = 39/1757 (2%) Strand=Plus/Plus Query 261 AGTTTCCTCTCGTCTCTCGGAGTGGAAGAATCCGGAAACTTGTTCTGGAATCAAAAGACA 320 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 158 AGTTTCCCCTCGTCTCTCGGAGTGGAAGAATCCGGAAACTTGTTCTGGAATCAAAAGACA 217 Query 321 CGAACCTGAACCTAGCCGCT-GTTCCAGGCGGCTCAGAATCGTTCGAGCTTGCTGCAAAG 379 |||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct 218 AGAACCTTAACCTAGCCG-TAGTTCCAGGCGGCTCAGAATCGTTCGAGCTCGCTGCAAAG 276 Query 380 TTCTGCTACGGCGTTGGCGTCCAATAT-AACTCGTCCAACATTGCGGCGCTGCGATGCGT 438 |||||||||||||| |||||||||| | |||||| ||||||||||||| |||| ||||| Sbjct 277 TTCTGCTACGGCGTCGGCGTCCAAT-TCAACTCGGCCAACATTGCGGCTTTGCGGTGCGT 335 Query 439 GGCTCATTACCTGGAGATGACAGAAGACTTGTCAGAGAAGAACCTCGAGGCGAGAACAGA 498 |||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||| Sbjct 336 GGCTCATTACCTTGAGATGACAGAAGAGTTGTCGGAGAAGAACCTGGAGGCGAGAACAGA 395 Query 499 GGCCTACCTGAAAGACTCCAT-TTTCAATGACATATCGAATTCGATCACTGTTCTTCACT 557 ||||||||| ||||||||||| ||| |||||||| ||||||||||||||||||||||||| Sbjct 396 GGCCTACCTCAAAGACTCCATCTTT-AATGACATTTCGAATTCGATCACTGTTCTTCACT 454 Query 558 CCTGCGAGAGGCTACTGCCTGTAGCTGAAGAGATCAACCTCGTCGGGAGGCTGGTCAACG 617 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 455 CCAGCGAGAGGCTACTGCCTGTAGCTGAAGAGATCAACCTCGTCGGGAGGCTGGTCAACG 514 Query 618 CAATCGCTGTAAACGCCTGCAAAGAACAGCTAGCCTCTGGTTTGCTCAAGCTTGATCAGA 677 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 515 CAATCGCTGTAAACGCCTGCAAAGAACAGCTAGCCTCTGGTTTGCTCAAGCTTGATCAGA 574 Query 678 GTTTCAGCTGCGGCGTCCCGGAGACTGCGAAACCTTGTGACTGGTGGGGTCGCTCTCTTC 737 ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| Sbjct 575 ATTTCAGCTGCGGCGTGCCGGAGACTGAGAAACCTTGTGACTGGTGGGGGCGCTCTCTTC 634 Query 738 CCATCCTCAAGCTTGATTTCTTCCAGAGAGTTCTCTCCGCCATGAAATCCAAAGGTCTCA 797 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 635 CCATCCTCAAGCTCGATTTCTTCCAGAGAGTTCTCTCCGCCATGAAATCCAAAGGTCTCA 694 Query 798 ATCACGACATTATCAGTGACATCCTTATGAGCTACGCTCGCAAATCACTGCAGATCATCA 857 ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| Sbjct 695 ATCACGACATTATCAGTGACATCCTCATGAGCTACGCTCGCAAGTCACTGCAAATCATCA 754 Query 858 GAGAACCGAATCTCGTCAAATCAGATTCCGATCTTCAGAGGAAACAGCGAATCGTCCTTG 917 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 755 GAGAACCGAGTCTCGTCAAATCAGATTCCGATCTGCAGAGGAAACAGCGAATCGTCCTTG 814 Query 918 AAGCGGTCGTCGGGCTCCTCCCAACGCAAGCGAACAAAAGCTCGATTCCGATCTCGTTCC 977 |||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 815 AAGCGGTCGTGGGGCTCCTCCCAACGCAAGCGAACAAAAGCTCAATTCCGATATCGTTCC 874 Query 978 TCTCTAGCTTGTTGAAGACCGCTATAGGATCTGGCACCTCCGTCTCTTGCAGATCCGATC 1037 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 875 TCTCTAGCTTGTTGAAGACCGCTATAGGATCTGGAACCTCCGTCTCTTGCAGATCGGATC 934 Query 1038 TGGAGAGACGGATCAGCCACCTGCTCGACCAGGCCATCCTTGAAGACATCCTTATTCCGG 1097 ||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||| Sbjct 935 TGGAGAGACGGATCAGCCACCAGCTCGACCAGGCGATCCTGGAAGACATCCTTATTCCGG 994 Query 1098 CGAACATCGGCGCCATGTACGACACCGACTCGGTGCAGAGGATTTTCTCAATGTTCTTGA 1157 ||||||| |||||||||||||||||||||||||||||||| || ||||| |||||| ||| Sbjct 995 CGAACATGGGCGCCATGTACGACACCGACTCGGTGCAGAGAATCTTCTCCATGTTCCTGA 1054 Query 1158 ACCTTGACGAGTGCGAGTACAGAGATGATGATGACGACGAGGA-G--G-AC--GCGGTGG 1211 |||||||||||||||| |||||||||||||| ||||||||||| | | | ||||||| Sbjct 1055 ACCTTGACGAGTGCGACTACAGAGATGATGACGACGACGAGGACGCTGGAGATGCGGTGG 1114 Query 1212 ACGAGAGCGAGATGGCCATGTACGATTTCGAGGGGGCTGAGTCACCGAAACAGAGCTCCA 1271 |||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct 1115 ACGAGAGCGAGATGGCGATTTACGATTTCGAGGGGGCTGAGTCTCCGAAACAGAGCTCCA 1174 Query 1272 TCTTCAAGGTGTCGAAGCTGATGGATAGTTATCTCGCTGAGGTGGCTCTGGACTCGAGCC 1331 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1175 TCTTCAAGGTGTCGAAGCTGATGGATAGTTATCTCGCTGAGGTGGCTCTCGACTCGAGCC 1234 Query 1332 TTCCTCCCTCCAAGTTTATAGCACTCGCAGAGCTTCTCCCTGACCATGCTCGCGTCGTCT 1391 | ||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 1235 TCCCTCCCTCCAAATTCATAGCTCTCGCAGAGCTTCTCCCTGACCATGCTCGCGTCCTCT 1294 Query 1392 GCGATGGCCTCTACCGAGCCGTTGATATCTTCCTCAAGGTTCACCCCCACATGAAAGATT 1451 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1295 GCGATGGTCTCTACCGAGCCGTTGATATCTTCCTCAAGGTTCATCCCCACATGAAAGATT 1354 Query 1452 CGGAACGTTACCGTCTCTGCAAGACAGTCAGCTGTAAGAAACTGTCGCAGGACGCAAGCA 1511 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1355 CAGAACGTTACCGTCTCTGCAAGACAGTCAGCTGTAAGAAACTGTCGCAGGACGCAAGCA 1414 Query 1512 GCCACGCGGCGCAAAACGAGAGACTTCCGGTTCAGATTGCGGTTCAAGTCCTGTTCTACG 1571 |||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1415 GCCATGCGGCGCAAAATGAGAGGCTTCCGGTTCAGATTGCTGTTCAAGTCCTGTTCTACG 1474 Query 1572 AACAGACACGGCTCAAGAACGCCATGACCAGCGGCGGTGGCACAGGCGGTTCGAACCAAA 1631 ||||||||||||||||||||||||||||||||||||||||||| | | | | ||| Sbjct 1475 AACAGACACGGCTCAAGAACGCCATGACCAGCGGCGGTGGCAC-GA-G---C---C-AAA 1525 Query 1632 GCCAGTTCTTCTTGTTCCCAAACCGCTCGGGAAGCGGGATGGCAAGCGGAGCCATCTCGC 1691 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct 1526 GCCAGTTCTTCTTGTTCACAAACCGCTCGGGAAGCGGGATGGCAAGCGGAGCGATCTCGC 1585 Query 1692 CGAGGGACAACTATGCATCAGTGAGAAGAGAGAACAGAGAGCTGAGACTAGAGGTGGCCA 1751 || ||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| Sbjct 1586 CGCGGGACAACTATGCGTCAGTGAGAAGAGAGAACAGAGAGCTGAGACTGGAAGTGGCCA 1645 Query 1752 GGATGAGGATGAGGCTAACGGACCTGGAGAAAGATCATGTATCGATGAAGAGAGACTTCG 1811 ||||||||||||||||||||||||| ||||| |||||||| |||||||||| |||||||| Sbjct 1646 GGATGAGGATGAGGCTAACGGACCTCGAGAAGGATCATGTTTCGATGAAGAAAGACTTCG 1705 Query 1812 TGAAGCCGCAGAGCAGGAGGAGGCGTTATGGAATGTTGAGGAAGCTCTCGAGAGGTCTGA 1871 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1706 TGAAGCCGCAGAGCAGGAGGAGGCGTTATGGAATGTTGAGGAAGCTCTCAAGAGGTCTGA 1765 Query 1872 ACAAGTTGAACGCAATCGTTTTGAGATTTAGGAGCAGCCAAAGTGTTGCCAGTAGCGGTA 1931 |||||||||||||||||||||||||||||||||||||||||||| | ||| | Sbjct 1766 ACAAGTTGAACGCAATCGTTTTGAGATTTAGGAGCAGCCAAAGT------A--AGC---A 1814 Query 1932 AAAAGCATACGGAGGAGAAAACGAATTCGGAAAGACGATTCATGTTTCAGAAGAGAAGAT 1991 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1815 -------TACGGAGGAGAAAACGAATTCGGAAAGACGATTCATGTTTCAGAAGAGAAGAT 1867 Query 1992 GTCACTCTGTTTCTTGA 2008 ||||||||||||||||| Sbjct 1868 GTCACTCTGTTTCTTGA 1884 Score = 257 bits (139), Expect = 2e-67 Identities = 155/162 (96%), Gaps = 3/162 (2%) Strand=Plus/Plus Query 32 ATGGGTGTTGTTACTGTTCCTGAGTCTAATAAGCAAAGTGTTGCTGCTAAAAGAGCGTTT 91 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1 ATGGGTGTTGTTACTGTTCCTGAGTC---TAAGCAAAGTGTTGCTGCTAAAAGAGCGTTT 57 Query 92 CGTCCAAGTTCCAGTATCAGACACACTCCTCAATGGCCTGTCTCGGACGTTACGAGTGAC 151 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 CGTCCAAGTTCCAGCATCAGACACACTCCTCAATGGCCTGTCTCGGACGTTACGAGTGAC 117 Query 152 TTAACCATTGAAGTCGGCTCTGCGACCTTTTCCCTTCACAAG 193 |||||||| |||||||||||||| | |||||||||||||||| Sbjct 118 TTAACCATCGAAGTCGGCTCTGCCAGCTTTTCCCTTCACAAG 159 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79456251070 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5