BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G48160.1
Length=4713
Score E
Sequences producing significant alignments: (Bits) Value
Ahg484006 jgi|Araly1|484006|fgenesh2_kg.4__3066__AT2G48160.1 6011 0.0
Ahg486811 jgi|Araly1|486811|fgenesh2_kg.5__2803__AT3G63070.1 902 0.0
> Ahg484006 jgi|Araly1|484006|fgenesh2_kg.4__3066__AT2G48160.1
Length=4601
Score = 6011 bits (3255), Expect = 0.0
Identities = 3864/4146 (93%), Gaps = 90/4146 (2%)
Strand=Plus/Plus
Query 120 CGGGGATTCAATGCCTGCGAGTTCATCTGGGGAACCTGTCACCGAAAATCCTATACACTC 179
||||| ||||||||||||||||||| | ||||||||||||| |||| ||||||
Sbjct 53 CGGGGTTTCAATGCCTGCGAGTTCA--T-------CTGTCACCGAAAACCCTAGACACTC 103
Query 180 CCAATCTCGCCTCCGGTTCTTGCTTTACTT-G---GAGTGTT--AGAATTCG---C-TTC 229
||||||||||||||| |||||||| ||||| | ||||||| |||||||| | |||
Sbjct 104 CCAATCTCGCCTCCGATTCTTGCTCTACTTGGTTCGAGTGTTAGAGAATTCGCTTCGTTC 163
Query 230 -TTTACTTGATGGCTCCGAGCCGCAGGAAAGGCGGTGGTAGGGCTGCCGCCGTAGCTGCT 288
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 164 GTTTATTTGATGGCTCCGAGCCGCAGGAAAGGCGGTGGTAAGGCTGCCGCCGTAGCTGCC 223
Query 289 GCCTGCCGAAAGCGGAAGGTGGGCGACCTTGTGCTTGCCAAAGTCAAAGGTTTTCCTGCT 348
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 GCCTGCCTAAAGTGGAAGGTGGGCGACCTTGTGCTTGCCAAAGTCAAAGGTTTTCCTGCT 283
Query 349 TGGCCTGCCGTGGTTAGTGAGCCTGAAAAGT-GGGATGCATCACCCGATTCGAAGAAAGT 407
|||||||||| |||||||||||| ||||||| |||| || ||| |||||| |||||||||
Sbjct 284 TGGCCTGCCGCGGTTAGTGAGCCAGAAAAGTGGGGA-GCTTCAACCGATTTGAAGAAAGT 342
Query 408 GTTTGTTCACTTTTTTGGAACACAACAGATAGCTTTCTGCAATCCTGGCGATGTTGAAGC 467
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 343 CTTTGTTCACTTTTTTGGAACACAACAGATAGCTTTCTGCAATCATACCGATGTTGAAGC 402
Query 468 ATTTACAGAGGAGAGGAAGCAATCACTTTTGACAAGACGCCATGCGAAAGGGTCAGATTT 527
||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 403 ATTTACAGACGAGAGGAAGCAATCACTTTTGACAAAACGCCATGCGAAAGGTTCAGATTT 462
Query 528 TGTTCGTGCTGTGAAGGAGATTATAGAGAGTTATGAGAAGCTTAAGCAGCAAGAACGAGC 587
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 463 TGTTCGTGCTGTAAAGGAGATTATAGAGAGTTATGAGAAGCTTAAGCAGCAAGAACAAGC 522
Query 588 TAGTGATCCCAAATCTGCTGAAGAAGGCACTCTTGGGAGTGCTGAGAATACAACACTGAT 647
| |||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||
Sbjct 523 TGGTGATCCCAAATCTGCTGAAGAAGCCACTCTTGAGAGTGCTGAGGATACTACACTGAT 582
Query 648 GCCTCAGGTCATTGAAATTCCAACTGCGACAAGTCTAACACAAATGAATTCTGATCCTAG 707
||||||||||| |||||||||||||| ||||||||||||||||||||| |||| ||||||
Sbjct 583 GCCTCAGGTCAGTGAAATTCCAACTGGGACAAGTCTAACACAAATGAAGTCTGTTCCTAG 642
Query 708 TCATGGTAGAGATGAATCTACTCTGCTAAATGAGGATGCTTCAGCTGCTGAACAAATGCT 767
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 643 TCATGGTAGAGATGAATCTACTATGCTAAATGAGGATGCTTCAGCTGCTGAACAAATGCT 702
Query 768 AGCCCTGCGTGATAACAGTGGACCACGTAACAAAGCCTGTGACAGTGCAGTTGTTAAAGA 827
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 703 AGCCCTGCGTGATAACAGTGTACCACGTAACAAAGCCTGTGATAGTGCAGTTGTTAAAGA 762
Query 828 ACCACGCAAGATAGCTACATATTCTTCAAGGAAAAGAAATGGAGGGGTACGATCTCAAAA 887
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 763 ACCACGCAAGATAGCAACATATTCTTCAAGGAAAAGAAATGGAGGGGTACGATCTCAAAG 822
Query 888 TTGTGCTCCACAAAATGAA-ACATGTCCAGTTCAGCGCTCGAAAAGTCCATCAAGGTTGC 946
||||| ||||| || ||| |||||| | ||||||||||| |||||| ||||||||||||
Sbjct 823 GTGTGCACCACAGAA-GAATACATGTTCGGTTCAGCGCTCTAAAAGTTCATCAAGGTTGC 881
Query 947 AAACAGAGAAGCTTCAAAGCTCCATGTTACAAAACAGCGATGGTGGACAGACTATTGATG 1006
|||| || |||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 882 AAACCGATAAGCTTCAAAGCTCCATGTTGCAAAACAGCGATGGTGGACAGAGTATTGATG 941
Query 1007 ACGTGGAAGACGGAGCATTAAGAAGGGAAAAAAGGATCAGAAGATCATCAGGTCATTCTG 1066
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 942 ACGTGGAAGATGGAGCATTAAGAAGGGGAAAAAGGATCAGAAGATCATCAGGTCATTCTG 1001
Query 1067 AATCAGATGATGTGGCTACATCATCTTTAAATTCCCATGGAAGTGACGAAGAAAATGCCT 1126
||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||
Sbjct 1002 AATCAGATGATGTGGCTTCATCAGCTTTAAATTCCCATGGGAGTGACGAAGAAAATGCCT 1061
Query 1127 CTGAAATTGCAACGGTTGAATCTGATAAT-A-A-TAGGAATGAAGGCAATGGTGTAGATT 1183
|||||||||| |||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct 1062 CTGAAATTGCGACGGTTGAATCTGATAATAATACTAGGAATGAAGGCAATGGTGTAGATT 1121
Query 1184 CTGGTTCCAAAGTCGAACAAATTGATATTGGTGGA-AAGTTTCTCGAAGGAGACTATGAC 1242
||||||||||||| |||||||| |||||||||||| || |||||||||||||| |||||
Sbjct 1122 CTGGTTCCAAAGTTGAACAAATGGATATTGGTGGACAA-TTTCTCGAAGGAGATTATGAG 1180
Query 1243 CTCAACAAGGGGCTAAATTTCCAAATTAATATCATGGTTAAGAGAAAGAAGAGAAAGCCG 1302
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 CTCAACAAGGGGCTTAATTTCCAAATTAATATCATGGTTAAGAGAAAGAAGAGAAAGCCG 1240
Query 1303 ACCAGAAAACGTGGAACCAGTGATGTTGTTGATCCTCAGGCTAAAGTTGAAGGAGAAGCA 1362
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1241 ACCAGAAAACGTGGAACCAGTGATGTTGTTGATCCTCAGGCTAAAGTTGAAGCAGAAGCA 1300
Query 1363 GTTCCTGAGGCTGGAGCACGTAATAATGTTCAGACATCACAAAATTCTCATGAAAAGTTT 1422
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 1301 GTTCCTGAGGCTGGAGCACGTGATAATGTTCAGACATCACAAAATTCTCATGAAAGGTTT 1360
Query 1423 ACTGAGAGGCCTTGTGAAGAGAATGGGGATGAGCACTTACCTCTGGTGAAACGAGCCAGA 1482
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1361 ACTGAGAGGCCTTGTGAAGATAATGGGGATGAGCACTTACCTCTGGTGAAACGAGCCAGA 1420
Query 1483 GTCAGGATGAGTAGAGCATTTTATGGTAATCATGAGGCCAATAGCTCTTTGCAGGCGGAA 1542
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1421 GTCAGGATGAGTAGAGCATTTTATGGTAATCATGAGGCCAATAGCTCTTCACAGGTTGAA 1480
Query 1543 GAAAGATCACCCAAGGACACTGTGGTCAGTGCAACAGCACAGACAAGCCCTTCTGATATC 1602
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GAAAGATCATCCAAGGACACCCTGGTCAGTGCAACAGCACAGACAAGCCCTTCTGATATC 1540
Query 1603 ATTTCTAGTCATGATACTTTTGCAGTTGAAGAATCTAAATTCTTTGAAGTGTCTGCTAAG 1662
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 1541 ATTTCTAGTCATGATACTTTTGCAGTTGAAGAATCTACATTTTTTGAAGTGTCTGCTAAG 1600
Query 1663 CTCTCAGGGGACATGGTCAATGTAGCACCATCTCCCGTGGAGAAATCTCATGATGGAATG 1722
|||||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1601 CTCTCAGGTGACATGGTTAATGTAGCACCATCTCCTGTGGAGAAACCTCATGATGGAATG 1660
Query 1723 TCTCCATCTGAGGCTTGCGTTCAGACTGTgagagagagagaATATGCTATGGGGTGGAAT 1782
|||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||
Sbjct 1661 TCTCCATCTGAGGCTTGCGTTCAGACTGTGGGAGGGAGAGAATATGCTGTGGGGTGGAAT 1720
Query 1783 GAGCTTAGCAAGACACCAGATGATAAATCAGCTGGACCCCAATATAATCAAGTTAGCAGT 1842
|||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||||
Sbjct 1721 GAGCTTAGCAAGACACCAAATGATGAAGCAGCTGGACCCCAATCTAATCAAGTTAGCAGT 1780
Query 1843 TTGCCAGCTGGCGAAGCTCAGACAGCTAGCGTTCCAGAAGCTGTGTGCCCTGAGGTCCTG 1902
||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| | ||
Sbjct 1781 TTGCCAGCTGGCGAAGCTCAGACTGCTAGTGTTCCTGAAGCTGTGTGCCCTGAGGACATG 1840
Query 1903 AAGCTGCTAACTAGTGAGTCTGATCTTCCAGCCGTACAATACTGTCAAGTTGCTAAAATT 1962
|||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 1841 AAGCTGCTTACTAGTGAGTCTGATCTTCCAGTCGTACAATGCTGTCAAGTTGCTAAAATT 1900
Query 1963 GAACCCTCCATGGATCCTAATACTGTGGATTCATCTGCAAACAATGCCTCTGAGATATGC 2022
|| || ||| |||||||||||||||| ||||||||||||||||| ||||||| |||||||
Sbjct 1901 GATCCATCCTTGGATCCTAATACTGTCGATTCATCTGCAAACAAGGCCTCTGGGATATGC 1960
Query 2023 TCATTAAGCATACCTTCTCAATTATCTGGCCAGGACAGGAGCAACGACCAAGATGCTTGT 2082
|||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||
Sbjct 1961 TCATTAAGCATACCTTCTCAGTTATCTGGCCAGGACAAAAGCAAGGACCAAGATGCTTGT 2020
Query 2083 GTAT-CATTGGAAAATTCTCGTGAATATCTGAATGAAGAAGGCAGTAAAATTGATGCTTG 2141
| || ||||||| ||| || |||||||||||||||||||||||| ||||| |||||||||
Sbjct 2021 G-ATTCATTGGACAATACTTGTGAATATCTGAATGAAGAAGGCAATAAAAGTGATGCTTG 2079
Query 2142 TGTGGCTCAGGTTGTTCAATCTGAAGCTATAGAACATTCTCCATCGTCTTGTTTAGTGGT 2201
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2080 CGTGGATCAGGTTGTTCAGTCTGAAGCTATAGAACATTCTCCATCGTCTTGTTTAGTGGT 2139
Query 2202 GAATAAGCAGGAGACTGAGAACATGCCAAAAA-CTGTAAACATGCTGCTGAAAGAAGGGC 2260
|||||||||||||||||||||||||| |||| ||| ||| |||||||||||||||| ||
Sbjct 2140 GAATAAGCAGGAGACTGAGAACATGC-AAAAGGCTGAAAAGATGCTGCTGAAAGAAGTGC 2198
Query 2261 ATGGAAGTCTGGGTGAAGAATGTGCTATTGTCGAACCAGCTCAATGTACTCCAAATCTAC 2320
||||||||||| |||||||||||||||||||| ||||| ||||| |||||||||||| ||
Sbjct 2199 ATGGAAGTCTGCGTGAAGAATGTGCTATTGTCAAACCATCTCAAAGTACTCCAAATCCAC 2258
Query 2321 CCATCTCCGCAACTGAAAGTGATGTGATA---G----T--TG-G-T-G---A--AAA-TG 2362
||||||||||||||||||||||||||||| | | || | | | | ||| ||
Sbjct 2259 CCATCTCCGCAACTGAAAGTGATGTGATAACTGAAAGTGATGTGATAGTTGATGAAAATG 2318
Query 2363 TACCTTTGAATGAAATAGGGTGTACCAAATGTGA-GGACGCTGTTGAGGACAGTAGGCAG 2421
||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||
Sbjct 2319 TACCTTTGAATGAAATAGGGTATAACAAATGTGATGG-CGCTGTTGAGGACAGTAGGCAG 2377
Query 2422 CTCAAAATGATTGGTGAGACTAATGATCAAAAGCAGCAGGTCCAAACCAACAATTCTGTC 2481
||||||||||||| ||||||| ||||| ||||||||||||||||||||| |||||||| |
Sbjct 2378 CTCAAAATGATTGTTGAGACTGATGATAAAAAGCAGCAGGTCCAAACCATCAATTCTGGC 2437
Query 2482 T-TAGTATCTGAGAACCTGTCAAGAGAAAAAATGAGTTTTTCTCCTGCTATTACTGCAGA 2540
| | |||||||||||||| ||| | |||||||||||||| |||||||||| |||||||||
Sbjct 2438 TCT-GTATCTGAGAACCTTTCACGTGAAAAAATGAGTTTATCTCCTGCTAATACTGCAGA 2496
Query 2541 CACTCCTGCGAGGGGCACTCCACATAGCAGCTCAGTTTATTACCACATTTCTACTTCAGA 2600
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2497 TACTCCTGCGAGGGGGACTCCACATAGCAGCTCAGTTTATTACCACATTTCTACTGCAGA 2556
Query 2601 AAGTGCAAATGATATGCAGAACAACAGTAGTGGCAGCCCAAATATTCCAACTGGTGAGAA 2660
||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||
Sbjct 2557 AAGTGCAAATGATATGCAGAACAACAGTAGTTGCAGCCCAAATGTTCCATCTGGTGAGAA 2616
Query 2661 GAAAAATGATTGTGATGCCATTGTCAAAGAAGAAGAGAAAATCGAAACAGGTGTATGTCA 2720
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2617 GAAAAATGTTTGTGATGCCATTGTCAAAGAAGAAGAGAAAATCGAAACAGGTGTATGTCA 2676
Query 2721 GGGACAGAAAGTTGTTAGTTGTGATGTGCAATCCACTCGTGAATCTTATGAGGATGCACT 2780
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2677 GGGACAGAAAGTTGTTAGTTGTGATGTGCAATCCACTCGTGGATCTTATGAGGATGCACT 2736
Query 2781 TTGCTCATTGGTGAGGACAAAGGAGAGTATTGGCCGAGCAACTTGTTTGGCTATGGACTT 2840
| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2737 TAGTTCATTGGTGAGGACAAAGGAGAGTATTGGCCGAGCAACTCGTTTGGCTATGGACTT 2796
Query 2841 GATGAAATTTGGTGTGTCTGCAAAGGCTATGGAGATTTTGGCTCATACTTTGGAGAGTGA 2900
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2797 GATGAAATTTGGTGTGTCTGCAAAGGCTATGGAGATTTTGGCTCATACTTTGGAAAGTGA 2856
Query 2901 GTCAAATTTAAAGAGGAGGGTGGACTTATTTTTCCTTGTGGATTCTATCGCTCAGTGCTC 2960
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 2857 GTCAAATTTAAAGAGGAGGGTGGACTTATTTTTCCTTGTGGATTCCATTGCTCAGTGCTC 2916
Query 2961 CAAAGGTCTGAAAGGTGATACTGGTTGTGTTTATCTTTCAGCCATTCAAGTAATTTTACC 3020
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2917 CAAAGGGCTGAAAGGTGATACTGGTTGTGTTTATCTTTCAGCCATTCAAGTAATTTTACC 2976
Query 3021 TCGTCTATTGGCGGCTGCTGTACCTGCTGGAGCTACCACACAAGAAAATCGGAAACAGTG 3080
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2977 TCGCCTATTGGCGGCTGCTGTACCTGCTGGAGCTACCACACAAGAAAATCGGAAACAGTG 3036
Query 3081 CTTAAAGGTTTTGAAGCTTTGGCTTGAAAGACGGATCCTGCCTGAATCTATTGTTCGTCA 3140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3037 CTTAAAGGTTTTGAAGCTTTGGCTTGAAAGACGGATCCTGCCTGAATCTATTGTTCGTCA 3096
Query 3141 CCATATAAGAGAACTTGATTCACATAGTATAGTTCCTGCTTGCCTCTATTCTCGGCGCTC 3200
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3097 CCATATAAGAGAACTTGATTCACATAGTATAGTTCCTGTTTGCCTCTATTCTCGGCGCTC 3156
Query 3201 AGCTCGAACAGAAAGGTCGTTGGATGATCCTGTGAGAGATATGGAGGATATGCTGGTGGA 3260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3157 AGCTCGAACAGAAAGGTCGTTGGATGATCCTGTGAGAGATATGGAGGATATGCTGGTGGA 3216
Query 3261 TGAATATGGAAGTAACTCAACTCTCCAGCTCCCTGGATTTTGCATGCCCGCATTGCTTAa 3320
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3217 TGAATATGGAAGTAATTCAACTCTCCAGCTCCCTGGATTTTGCATGCCCGCATTGATTAA 3276
Query 3321 ggatgaggagggagggagtgactcggagggagggtgtgactcggagggaggcagtgactc 3380
||||||||||||||||| || | | |||||||||||||||||||||
Sbjct 3277 GGATGAGGAGGGAGGGA----CT-G-A------------CTCGGAGGGAGGCAGTGACTC 3318
Query 3381 ggatggaggggaTTTCGAGTCTGTCACCCCTGAACATGAGTCCAGAATCCTTGAAGAAAA 3440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3319 GGATGGAGGGGATTTCGAGTCTGTCACCCCTGAACATGAGTCCAGAATCCTTGAAGAAAA 3378
Query 3441 TGTCTCGTCATCCACGGCTGAAAGGCATACGCTTATATTGGAAGATGTTGATGGTGAGCT 3500
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3379 TGTCTCGTCATCCACGGCTGAAAGGCATACACTTATATTGGAAGATGTTGATGGTGAGCT 3438
Query 3501 TGAAATGGAAGATGTGGCTCCGCCTTGGGGAACTGAAAACTGCACACACACTGATCAAGC 3560
||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 3439 TGAAATGGAAGATGTGGCTCCGCCTTGGGAAACTGGAAACTGCGCACACACTGATCAAGC 3498
Query 3561 TGATAATACAAAGGTTTCCAATTGTCAGCTTGGACAGCAGCATCGGCCCGTCTTTGGCAC 3620
|||||||||||||||| ||||||||||||||||||| ||||||| ||| |||||||||||
Sbjct 3499 TGATAATACAAAGGTTACCAATTGTCAGCTTGGACAACAGCATCTGCCTGTCTTTGGCAC 3558
Query 3621 TTCACATCAGCATATGTCCTTGTCATCTCCACCACTGCCATCTTCCTCGCCAC--C---- 3674
||||||||||||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct 3559 TTCACATCAGCATGCGTCATTGTCATCTCCACCACTGCCATCTTCCTCGCCACTACCTCC 3618
Query 3675 ACCGC--C-ACCAGCTCCCCCTTCACAGCAGGGGGAGTGTGCCATGCCTGATTCCTACTT 3731
||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3619 ACCGCTGCCACCAGCTCCCCCTTCACAGCAGGGCCAGTGTGCCATGCCTGATTCCTACTT 3678
Query 3732 GAATGGGTTTGAAAATGGAGGATATCGCAACGTGCATGGAGATCAACAGGCTGGTCCTCT 3791
||||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 3679 AAATGGCTTTGGAAATGGAGGATATCGCAACATGCATGGAGATCATCAGGCTGGTCCTCT 3738
Query 3792 TAGGATGAACCCGCCACTGTCTGGAAGCACAATGCATTATCAAGGTCCGGAGTCGTCTTA 3851
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3739 TAGGATGAACCCACCACTGTCTGGAAGCACAATGCATTATCAAGGTCCGGAGTCCTCTTA 3798
Query 3852 TATTTCTGGTGTACAACTTACGAATAGTATTCCACAGGCAGATGGTTCTAATTTCCAGCA 3911
|| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||
Sbjct 3799 TAGTTCTGGTGTACAACTTACGAGTAGCATTCCACAGACAGATGGTTCTAATTTCCAGCA 3858
Query 3912 TAGGCCTTATCCCTCTCATCCTCATCCACATCCTCCTCCCCCTCCACCGCCACCACAGCA 3971
|||||||||||| |||||||| | | | | |||||||||||||| || |||||||||||
Sbjct 3859 TAGGCCTTATCCATCTCATCC--A-C-A-A-CCTCCTCCCCCTCCGCCTCCACCACAGCA 3912
Query 3972 TCAATTCTCATTTAGAGAGCCGGGCCACGTTTTGAAGTCGCATAGGGACGCTCCATCGTA 4031
||||| |||||||| |||||| |||||| |||||||||||| |||||| |||||||||||
Sbjct 3913 TCAATACTCATTTACAGAGCCAGGCCACCTTTTGAAGTCGCGTAGGGAAGCTCCATCGTA 3972
Query 4032 CTCCCACAGATCTCATTATGTGCCGAATTGTGATGAAAGAAATTTTCATGATAACCATGA 4091
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3973 CTCCCACAGATCTCATTATGTGCCGAATTTTGATGAAAGAAATTTTCATGATAACCATGA 4032
Query 4092 GAGAATGAGGCATGCACCAT-TCGAGAATAGAGATAATTGGAGATATCCACCATCTTCTT 4150
|||||||||||||||||||| | || ||| |||||||||||||||||| |||||||||||
Sbjct 4033 GAGAATGAGGCATGCACCATAT-GATAATCGAGATAATTGGAGATATCAACCATCTTCTT 4091
Query 4151 CTTATGGTTCGAGATATCAAGATGAACACAAAGCTCCTTATCCATCCAGTTCATACAATG 4210
||||||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||
Sbjct 4092 CTTATGGTTCGAGATATGAAGACAAACACAAAGCCCCTTATCCATCTAGTTCATACAATG 4151
Query 4211 GTGTCC 4216
||||||
Sbjct 4152 GTGTCC 4157
Score = 405 bits (219), Expect = 1e-111
Identities = 301/337 (89%), Gaps = 19/337 (6%)
Strand=Plus/Plus
Query 4216 CGGTGGGATAATCCTCCTCGCCAATATAATAACAGAC-CCTCTTTTCATCCGAAGCCGCA 4274
||||||||| ||||||||||||||||||||||||||| || |||| || |||||||||||
Sbjct 4190 CGGTGGGATCATCCTCCTCGCCAATATAATAACAGACACC-CTTTGCACCCGAAGCCGCA 4248
Query 4275 TTCTGAAGGTCCTGCTCCAGTTGGAATGAGAGATCCGGGAATGTGGCATCAGAGAAGTGA 4334
|||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 4249 TTCTGATGGTCCTGTTCCAGTTGGAATGAGAGATCCGGGCATGTGGCATCAGAGAAGTGA 4308
Query 4335 CTAGAGAAACTTGAGAGAGTTATAAACTGGTAAACGAAGAG-GGT-GGTGTGAAGCAAAA 4392
||||||||||||||||||| | ||||||||||| |||||| || ||||| ||||||||
Sbjct 4309 CTAGAGAAACTTGAGAGAGATGGAAACTGGTAAA-GAAGAGAGGGCGGTGTAAAGCAAAA 4367
Query 4393 AAGCCAAAACACCGAGGTGATGTGGCTCTAATTTAAAAAGAGAACGGTTATGTTGTTGAG 4452
| || |||||||||||||||||||||||||| || | | | | |||||||||||
Sbjct 4368 A-GCAAAAACACCGAGGTGATGTGGCTCTAAG--AAT--G-G--C--T-ATGTTGTTGAG 4416
Query 4453 GTGAAATAGTGATATGATAAAGAAGTGAGAGTGTACATACATGATTTCGGAATCAGAATC 4512
||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 4417 GTGAAATAGTGATATGATAAAGAAGGGAGAGTGTACATA--TGATTTCGGAATCAGAATC 4474
Query 4513 ACATGCAATGCAGATTGTGAGGAGATGGTTaaaaaaa 4549
|||||||||||||| ||||||||||||| |||||||
Sbjct 4475 ACATGCAATGCAGAGAGTGAGGAGATGGT-AAAAAAA 4510
Score = 99.0 bits (53), Expect = 3e-19
Identities = 77/87 (89%), Gaps = 8/87 (9%)
Strand=Plus/Plus
Query 4622 TGTCAACATTATTTTGTTATGTGGGTTTTGACCTTGAAGTGTATGATGTATATCAGTATA 4681
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 4523 TGTCAACATTATTTTGTTATGTGGGTTTTGACCTTGGAGTGTATGATGTATAT---T--- 4576
Query 4682 TTCATCTCTTATAATAATATTCCTACT 4708
||||||||| |||||||||||||||
Sbjct 4577 --CATCTCTTAGAATAATATTCCTACT 4601
> Ahg486811 jgi|Araly1|486811|fgenesh2_kg.5__2803__AT3G63070.1
Length=4361
Score = 902 bits (488), Expect = 0.0
Identities = 1232/1581 (78%), Gaps = 92/1581 (6%)
Strand=Plus/Plus
Query 237 GATGGCTCCGAGCCGCAGGAAAGGCGGTGGTAGGGCTGC--CGCCGT-AGCTGCT-GCC- 291
||||||||||||||||| |||||||||||||| |||||| || | | | | ||| |||
Sbjct 299 GATGGCTCCGAGCCGCAAGAAAGGCGGTGGTAAGGCTGCGGCGGCATCATCCGCTCGCCG 358
Query 292 TG-CCGAAAGCGGAAGGTGGGCGACCTTGTGCTTGCCAAAGTCAAAGGTTTTCCTGCTTG 350
| | ||| ||||||| ||||| || |||||||||||||||||||| |||||||||||
Sbjct 359 AGAGTGGAAGGGGAAGGTTGGCGATCTCGTGCTTGCCAAAGTCAAAGGATTTCCTGCTTG 418
Query 351 GCCTGCCGTGGTTAGTGAGCCTGAAAAGT-GGGATGCATCACCCGATTCGAAGAAAGTGT 409
|||||||| |||||| || || ||||| | ||| | | ||| |||||||||||||||| |
Sbjct 419 GCCTGCCGCGGTTAGCGAACCGGAAAAATGGGGCTAC-TCAGCCGATTCGAAGAAAGTAT 477
Query 410 TTGTTCACTTTTTTGGAACACAACAGATAGCTTTCTGCAATCCTGGC-GATGTTGAAGCA 468
| |||||||||||||| || |||||||||||| ||||||||||| || ||||||||| ||
Sbjct 478 TAGTTCACTTTTTTGGCACTCAACAGATAGCTCTCTGCAATCCT-GCTGATGTTGAATCA 536
Query 469 TTTACAGAGGAGAGGAAGCAATCACTTTTGACAAGACGCCATGCGAAAGGGTCAGATTTT 528
||||| ||||||| ||||||||| |||||||||| ||| ||||| ||||| |||||||||
Sbjct 537 TTTACGGAGGAGAAGAAGCAATCGCTTTTGACAAAACGACATGCCAAAGGTTCAGATTTT 596
Query 529 GTTCGTGCTGTGAAGGAGATTATAGAGAGTTATGAGAAGCTTAAGCAGCAAGAACGAGCT 588
|| ||||| || |||||||| | ||||||||| |||||||| |||||||| || | ||||
Sbjct 597 GTCCGTGCCGTCAAGGAGATCACAGAGAGTTACGAGAAGCTGAAGCAGCAGGACCAAGCT 656
Query 589 AGTGATCCCAAATCTGCTGAAGAAGGC-ACTCTTGGGAGTGCTGAGAATACAACACTGAT 647
|||||||| |||| |||||||||| | ||| |||| ||| ||| ||| || || | |
Sbjct 657 AGTGATCCTAAATGTGCTGAAGAA-ACAACTGTTGGAAGTTCTGCGAACACTGTACAGCT 715
Query 648 GCCTCAGGTCAT-TGAAATTCCAACTGCG-ACAAGTC-TAACA--CAAATGA-ATTCTGA 701
|||||||| | | ||||| || || || | |||| | ||||| ||||| | | || |
Sbjct 716 GCCTCAGG-CCTGTGAAAATCTAATTG-GTTCAAGACTTAACACTCAAAT-AGAGTC-AA 771
Query 702 -TCCTAGTCATGGTAGAGATGAATCTACTCTGCTAAATGAGGATGCTTCAGCTGCTGAAC 760
| |||||||||||||||||||||| ||||| || | || |||| ||||||||||||
Sbjct 772 GTTCTAGTCATGGTAGAGATGAATCGACTCTTCTCAGCGAAGATG---CAGCTGCTGAAC 828
Query 761 AAATGCTAGCCCTGCGTGATAACAGTGGACCACGTAACAAAGCCTGTGACAGTGCAGTTG 820
||||||||||||||||| |||||| | | | | ||| ||||||||| ||||||| |
Sbjct 829 AAATGCTAGCCCTGCGTCATAACACTCTAGCTCATAATGGAGCCTGTGATAGTGCAGCAG 888
Query 821 TTAAAGAACCACGCAAGATAGCTACATATTCTTCAAGGAAAAGAAATGGAGGGGTACGAT 880
|||||| | | | |||||||||||||||||||||||| |||||||| | |||| ||
Sbjct 889 CTAAAGATCTATGTGAGATAGCTACATATTCTTCAAGGAGAAGAAATGAAAGGGTGCGGG 948
Query 881 CTCAAAATTGTGCTCCACAAAATGA-AACATGT-CCAGTTCAGCGCTCGAAAAGTC-CAT 937
||| ||| ||||||||||||| | | || || | || ||| ||| ||| |||| || |||
Sbjct 949 CTCTAAAGTGTGCTCCACAAAGT-ATAATAT-TACCGGTTGAGCACTCTAAAA-TCTCAT 1005
Query 938 CAAGGTTGCAAACAGAGA-AGCTTCAAAGCTCCATG-TTACAAAACAGCGATGGTGGACA 995
|||||||| || || | | |||||||| |||||| || ||| ||| |||||||| |
Sbjct 1006 CAAGGTTGGAATTGGATAGA-CTTCAAAGGTCCATGCTT-CAATGCAGTGATGGTGGCCC 1063
Query 996 GACTATTGATGACGTGGAAGACGGAGC-ATTAAGAAGG-GAAAAAAGGATCAGAAGATCA 1053
|| | | ||| | || || |||| || ||||||| |||||| ||||| | || |||
Sbjct 1064 GAGTGTCAATGGTATAGATGAAAGAGCCAT-AAGAAGGAGAAAAA-GGATCCGTAGGTCA 1121
Query 1054 TCAGGTCATTCTGAATCAGATGATGTGGCTACATCATCTTTAAATTCCCATGGAAGTGAC 1113
||||| |||||||||||||| || | | ||||| | |||||| || ||| |||
Sbjct 1122 ---GGTCAATCTGAATCAGATGACGTTGTTTCATCAGATCTAAATTTGCACGGATCTGAT 1178
Query 1114 GAAGAAAATGCCTCTGAAATTGCAACGGTTGAATCTGATAATAATAG--G-AATGAAGGC 1170
|| || || || ||||||||||| || |||||||||||||||||||| | |||||||||
Sbjct 1179 GAGGAGAACGCATCTGAAATTGCGACAGTTGAATCTGATAATAATAGTAGGAATGAAGGC 1238
Query 1171 AATGGTGTAGATTCTGGTTCCAAAGTCGAACAAAT-TGATATTGGTG--GAAAGTTTCTC 1227
|||||||| ||||||||||||||||| || || | ||||| || || || ||| |
Sbjct 1239 AATGGTGTGGATTCTGGTTCCAAAGTTGAGCAT-TCTGATACTGTTGCTGACGGTTG-T- 1295
Query 1228 GAAGGAGA-CTATGACCTCAACAAGGGGCTAAATTTCCAAATTAATATCATGGTTAAGAG 1286
|| |||| | |||| |||||||| ||||| |||||||||||| | ||||||||||||
Sbjct 1296 GACGGAGGTC-ATGAGCTCAACAAAGGGCTTGATTTCCAAATTAGCACCATGGTTAAGAG 1354
Query 1287 AAAGAAGAGAAAGCCGACCAGAAAACGTGGAACCAGTGATGTTGTTGATCCTCAGGCTAA 1346
|||||||| ||||| ||||| ||||||| ||||||||| || |||| |||| |||||
Sbjct 1355 GAAGAAGAGGAAGCCCACCAGGAAACGTGAAACCAGTGACATTATTGACCCTCCTGCTAA 1414
Query 1347 AGTTGAAGGAGAAGCAGTTCCTGAGGCTGGA-GCACGTAATAA-TGTTCAGACATCACAA 1404
|||||||| ||||| || | || ||| | || || | | || |||| ||| |||
Sbjct 1415 AGTTGAAGCAGAAG--GT-CTTG-GGCCCAATGCTTGTGACAGCTGC-CAGAGATCTCAA 1469
Query 1405 AATTCTCATGAAAAGTTTACTGAGAGGCCTTGTGAAGAGAATGGGGATGAGCACTTACCT 1464
||||||||||||| | | ||||||||| |||||||||||||| ||||| || || |||
Sbjct 1470 AATTCTCATGAAAGGCCGAATGAGAGGCCCTGTGAAGAGAATGGTGATGAACATTTGCCT 1529
Query 1465 CTGGTGAAA-CGAGCCAGAGTCAGGATGAGTAGAGCATTTTATGGTAATCATGAGGCCAA 1523
|| || ||| |||||||||||| | ||||||||||| ||||||| | || | ||| |||
Sbjct 1530 CTTGT-AAAGCGAGCCAGAGTCCGAATGAGTAGAGCTTTTTATGCTGATGAAAAGGTCAA 1588
Query 1524 TAGCTCTTTGCAGG-CGGAAGAAAGATCACCCAAGGACACTGTGGTCAGTGCAACAGCAC 1582
|| ||||| |||| || |||| |||||| | || |||||| | | |||||| | |
Sbjct 1589 TACCTCTTCACAGGTCG-AAGAGAGATCATCGAAAGACACTCTAATGAGTGCAGCTTTGC 1647
Query 1583 AGACAAGCCCTTC--TGA-T-ATCA---T--T-T-----CTAGT-CATGATACTTTTGCA 1626
||||||||||||| ||| | || | | | | || || |||||||||| ||||
Sbjct 1648 AGACAAGCCCTTCGGTGAATCATGAAAATGATATTGTTTCT-GTTCATGATACTTCTGCA 1706
Query 1627 GTTGAAGAATCTAA-ATTCTTTGAAGT-GTCTGCTAAGCTCTCAGGGGACATGGTCAATG 1684
| ||| ||| ||| | |||||| || |||||||||||| |||| | ||||| |||
Sbjct 1707 GCCGAAAAATTTAACAG-CTTTGA-GTTGTCTGCTAAGCTTTCAGATGTTATGGTTGATG 1764
Query 1685 TAGCACCATCTCCCGTGGAGAAATCT-CATGATGGAATGTCTCCATCTGAGG-CTTGCGT 1742
||| || |||| ||||||| ||| || || |||||||||| ||| ||| | || ||
Sbjct 1765 TAGTGCCTTCTCATATGGAGAATTCTTCA-GACAGAATGTCTCCGTCT-AGGGCCTGTGT 1822
Query 1743 TCAGACTGTgagagagagaga 1763
||||||||| || |||| |||
Sbjct 1823 TCAGACTGT-AG-GAGATAGA 1841
Score = 845 bits (457), Expect = 0.0
Identities = 1020/1279 (80%), Gaps = 90/1279 (7%)
Strand=Plus/Plus
Query 2109 TCTGAATGAAGAA-G-GCAGTAAAATTGA-TGCTTGTGTGGCTCAGGTTGTTCAATCTGA 2165
||| |||||| || | | || |||||||| | | || || ||||||||||||| || |
Sbjct 2222 TCTTAATGAAAAATGTG-AG-AAAATTGATTAC-CGTATGACTCAGGTTGTTCAGTCCCA 2278
Query 2166 AGCTATAGAACATTCTCCATCG-TCTTGTTTAGTGGTGAA-TAAGCAGGAGACTGAGAAC 2223
|||| |||||| | |||||| | || |||| |||||| || || | | ||| ||| |||
Sbjct 2279 AGCTTTAGAACCTCCTCCATTGTTC-TGTTCAGTGGTCAATTATG-AAGAGGTTGAAAAC 2336
Query 2224 ATGCCA-AAAACTGTA-AACA-TGCTGCTGAAAGAAGGGCATGGAAGTCTGGGTGAAGAA 2280
| || | |||| | |||| | || | ||||||| || ||||||| |||| |||||
Sbjct 2337 CCG-CAGGAGACTG-AGAACACT-CTACGGAAAGAAAACCAAGGAAGTCCGGGTAAAGAA 2393
Query 2281 -TGTGCTATTGTCGAACCAGCTCA-ATGTACTCCA-AATCTACCCA-TCTCCGCAACTGA 2336
| || || || | ||| |||||| ||| | | || |||| | || |||| || |||||
Sbjct 2394 CT-TGATAGTGACAAACAAGCTCACATG-A-TACAGAATCCA-GCACTCTCTGCTACTGA 2449
Query 2337 AAGTGATGTGATAGTTGGTGAA-AATGTACCTTTGAATGAAA-TAGGGTGT-ACCAAATG 2393
|||||| |||| |||| ||| | | |||| | |||||| || || | | | ||
Sbjct 2450 AAGTGAAATGATCGTTGAAGAAGCA-GAACCTCAGTATGAAACTA-TGTATGGTC-ACTG 2506
Query 2394 TGAGGACGCTGTTGAGGACAGTAGGCAGCT-CAAAATGA-TTGGTGAGACTAATGATCAA 2451
|| ||| || || ||| ||| || | |||| |||| || || ||||| | |||| ||
Sbjct 2507 TGCGGATGCAGTGGAGAACA-TA-G-AGCTGGAAAA-GAGTT-GTGAGGTTGATGAGCAG 2561
Query 2452 AAGCAGCAGGTCCAAACCAACAATTCTGTCTTAGTATCTGAGAACCTGTCAAGAGAAAAA 2511
||| ||||| | ||| ||| ||||||| ||| ||||||||||||||| ||| | | |||
Sbjct 2562 AAGGAGCAGATGCAAGCCACCAATTCTATCTCAGTATCTGAGAACCTTTCACGTG--AAA 2619
Query 2512 ATGAGTTTTTCTCCTGCTATTACTGCAGACACTCCTGCGAGGGGCACTCCACATAGCAGC 2571
| | | || | | | | | ||||||| ||||| ||||||||| ||| |
Sbjct 2620 A--A-------T--TG--A--A-TTC--A-TCTCCTGCAAGGGGTACTCCACATTGCAAC 2660
Query 2572 TCAGTTTATTACC-ACATTTCTACTTCAGAAAGTGCAAATGATATGCA-GAACAACAGTA 2629
|| | || | || | |||||||| ||||||||||||||| |||||| ||| |||||||
Sbjct 2661 TC--TGTA-TGCCGA-ATTTCTACCGCAGAAAGTGCAAATGCTATGCAGGAA-AACAGTA 2715
Query 2630 GTGGCAGC-CCAAATATTCCA-ACTGGTGAGAAGAAAAATGATTG--TGATGCCATTGTC 2685
| ||||| || ||| || || ||||||| || |||| |||| | ||| || ||||
Sbjct 2716 ATTGCAGCACC-AATGTT-CAGTTTGGTGAG--GAGAAATCATTGAATAATGACACTGTC 2771
Query 2686 AAAGAAGAAGAG-AAAATCGAAACAGGTGTATGTCAGG-GACAGAAAGTTGTTAGTTGTG 2743
||||||||| || ||| | |||||||| | ||||| || |||||||| |||||| ||
Sbjct 2772 AAAGAAGAA-AGCAAAGTTGAAACAGGCCCAACTCAGGTGA-AGAAAGTTATTAGTTCTG 2829
Query 2744 ATGTGCAATCCACTCG-TGAATCTTATGAGGA-TGCACTTTG-CTCATTGGTGAGGACAA 2800
||||||||| |||| | |||||||| ||| || ||||| ||| |||||||||||||||||
Sbjct 2830 ATGTGCAATTCACT-GTTGAATCTTTTGA-GACTGCAC-TTGACTCATTGGTGAGGACAA 2886
Query 2801 AGGAGAGTATTGGCCGAGCAACTTGTTTGGCTATGGACTTGATGAAATTTGGTGTGTCTG 2860
|||||| ||||||||||||||| | ||||||||||||||| |||||||||||||| |
Sbjct 2887 AGGAGACCATTGGCCGAGCAACTCGCTTGGCTATGGACTTGGCAAAATTTGGTGTGTCGG 2946
Query 2861 CAAAGGCTATGGAGATTTTGGCTCATACTTTGGAGAGTGAGTCAAATTTA-AAGAGGAGG 2919
||||||| ||||| ||| |||| ||||||||||| || |||||||||||| || ||||||
Sbjct 2947 CAAAGGCGATGGAAATTCTGGCCCATACTTTGGAAAGCGAGTCAAATTTACAA-AGGAGG 3005
Query 2920 GTGGACTTATTTTTCCTTGTGGATTCTATCGCTCAGTGCTCCAAAGGTCTGAAAGGTGAT 2979
||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 3006 GTGGATTTATTTTTCCTTGTGGATTCTATTGCTCAGTGCTCCAAAGGTCTGAATGGTGAT 3065
Query 2980 ACTGGTTGTGTTTATCTTTCAGCCATTCAAG-TAATTTTACCTCGTCTATTGGCGGCTGC 3038
||||| |||||||||||||| ||||||||| | || | ||||| ||||| | |||||
Sbjct 3066 GCTGGTGGTGTTTATCTTTCATCCATTCAAGCT-ATGCTGCCTCGCCTATTAACTGCTGC 3124
Query 3039 TGTACCTGCTGGAGCTACCACACAAGAAAATCGGAAACAGTGCTTAAAGGTTTTGAAGCT 3098
||| || ||||||||||||||||||||||| |||||||||||| | |||||||||| |||
Sbjct 3125 TGTTCCAGCTGGAGCTACCACACAAGAAAACCGGAAACAGTGCCTGAAGGTTTTGAGGCT 3184
Query 3099 TTGGCTTGAAAGACGGATCCTGCCTGAATCTATTGTTCGTCACCATATAAGAGAACTTGA 3158
|||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 3185 TTGGCTCGAAAGACGGATCCTTCCTGAATCTATAGTTCGTCACCATATAAGAGAACTTGA 3244
Query 3159 TTCACATAGTA-TAGTTCCTGCTTGCCTCTATTCTCGGCGCTCAGCTCGAACAGAAAGGT 3217
|||| ||||| | ||||||||||| |||||||||||||| || |||||||||||||||
Sbjct 3245 TTCAGTTAGTAAT-GTTCCTGCTTGTCTCTATTCTCGGCGATCTGCTCGAACAGAAAGGG 3303
Query 3218 CGTTGGATGATCCTGTGAGAGATATGGAGGATATGCTGGTGGATGAATATGGAAGTAACT 3277
|| ||||||| ||||| ||||||||||||| ||| ||||||||||||||||||||||| |
Sbjct 3304 CGCTGGATGACCCTGTTAGAGATATGGAGGGTATACTGGTGGATGAATATGGAAGTAATT 3363
Query 3278 CAACTCTCCAGCTCCCTGGATTTTGCATGCCCGCATTGCTTAaggatgaggagggaggga 3337
||||||||||||| | |||||| |||||||| ||| |||||| |||||| || | ||| |
Sbjct 3364 CAACTCTCCAGCTTCATGGATTCTGCATGCCTGCAATGCTTAGGGATGAAGACGAAGGAA 3423
Query 3338 gtgactcggagggagggtg 3356
|||||||||| || |||||
Sbjct 3424 GTGACTCGGATGG-GGGTG 3441
Score = 209 bits (113), Expect = 1e-52
Identities = 193/230 (84%), Gaps = 12/230 (5%)
Strand=Plus/Plus
Query 3369 aggcagtgactcggatggaggg-gaTTTCGAGTCTGTCACCCCTGAACATGAGTCCAGAA 3427
||| |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||
Sbjct 3419 AGGAAGTGACTCGGATGG-GGGTGATTTTGAGTCTGTCACCCCTGAACATGAGTCCAGAA 3477
Query 3428 TCCTTGAAGAAAATGTCTCGTCATCCACGGCTGAAAGGCATACGCTTATATTGGAAGATG 3487
|||||||||| ||||| | | |||| ||||||||||||| | ||||||||||||||
Sbjct 3478 GCCTTGAAGAACATGTCACACCCTCCATTACTGAAAGGCATACCCGTATATTGGAAGATG 3537
Query 3488 TTGATGGTGAGCTTGAAATGGAAGATGTGGCTCCGCCTTGGGGAAC-TGAAAACTGCAC- 3545
||||||||||||||||||||||||| |||||||| ||||||| || || || | | ||
Sbjct 3538 TTGATGGTGAGCTTGAAATGGAAGACGTGGCTCCACCTTGGG-AAGGTGGAAGCAGTACT 3596
Query 3546 A---C-A-CACTGATCAAGCTGATAATACAAAGGTTTCCAA-TTGTCAGC 3589
| | | ||| |||||||||||||||| | || | | ||| ||||||||
Sbjct 3597 AGTGCGATCACAGATCAAGCTGATAATAGAGAG-TCTGCAAATTGTCAGC 3645
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 178337787078
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5