BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G01930.2
Length=2055
Score E
Sequences producing significant alignments: (Bits) Value
Ahg927562 jgi|Araly1|927562|scaffold_300019.1 2883 0.0
Ahg940882 jgi|Araly1|940882|scaffold_601426.1 1389 0.0
Ahg927561 jgi|Araly1|927561|scaffold_300018.1 355 7e-97
Ahg927560 jgi|Araly1|927560|scaffold_300017.1 355 7e-97
Ahg927559 jgi|Araly1|927559|scaffold_300016.1 355 7e-97
> Ahg927562 jgi|Araly1|927562|scaffold_300019.1
Length=1792
Score = 2883 bits (1561), Expect = 0.0
Identities = 1708/1780 (96%), Gaps = 5/1780 (0%)
Strand=Plus/Plus
Query 69 AAAAATGGCGAGGACGACGCGAGAAAGAGTGAAATCGTTCATAAACAATAGATGGCTAGT 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 17 AAAAATGGCGAGGACGACGCGAGAAAGAGTGAAATCGTTCATAAACAATAGATGGTTAGT 76
Query 129 GTTTGTTGCGGCCATGTGGATTCAGTCTTGCGCTGGCATCGGTTACTTGTTCGGCAGCAT 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77 GTTTGTTGCGGCCATGTGGATTCAGTCTTGCGCTGGCATCGGTTACTTGTTCGGCAGCAT 136
Query 189 CTCTCCTGTCATCAAGAGCTCCCTCAACTACAACCAGAAACAGCTCTCCAGGCTCGGTGT 248
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 137 CTCTCCTGTCATCAAAAGCTCCCTCAACTACAACCAGAAGCAGCTCTCCAGGCTCGGTGT 196
Query 249 CGCCAAAGATCTCGGCGATAGTGTCGGCTTCCTCGCTGGTACTCTCTCCGAGATCTTGCC 308
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 197 CGCCAAAGATCTCGGCGATAGTGTCGGCTTCCTCGCTGCCACTCTCTCCGAGATCTTGCC 256
Query 309 TCTCTGGGCCGCTCTTCTCGTCGGCTCTGTCCAGAACCTTGTCGGCTATGGCTGGGTTTG 368
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 257 TCTCTGGGCCGCTCTTCTTGTCGGCTCTGTCCAGAACCTTGTCGGCTATGGCTGGGTTTG 316
Query 369 GCTTATCGTCACCGGTCGTGCTCCCATTCTTCCTTTATGGGCTATGTGTATCCTCATTTT 428
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 317 GCTTATCGTCACCGGTCGAGCTCCCATTCTTCCCTTATGGGCTATGTGTATCCTCATTTT 376
Query 429 TGTTGGGAACAACGGGGAGACCTACTTCAACACCGCTGCATTAGTTTCTGGTGTTCAGAA 488
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 377 TGTTGGGAACAACGGGGAGACCTACTTCAACACCGCTACATTAGTCTCTGGTGTTCAGAA 436
Query 489 CTTTCCCAAGAGCCGTGGTCCTGTCGTCGGTATCCTCAAGGGGTTTGCTGGCCTCGGCGG 548
|||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct 437 CTTTCCCAAGAGTCGTGGTCCTGTGGTCGGTATTCTCAAGGGGTTTGCTGGGCTCGGCGG 496
Query 549 TGCCATCCTCTCCCAGGTATACACAATGATCCACTCCTCTGACCGTGCATCCCTCATCTT 608
|||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||
Sbjct 497 TGCCATCCTCTCCCAGGTATACACGATGATCCACTCCTCTGACCATGCATCACTCATCTT 556
Query 609 CATGGTTGCTGTTGCCCCTTCAGTTGTTGTTGTTCCTCTCATGTTCTTCATCAGACCCGT 668
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 557 CATGGTTGCTGTTGCCCCATCAGTTGTTGTTGTTCCTCTCATGTTCTTCATCAGACCCGT 616
Query 669 CGGTGGTCACAGACAGATCCGTTCTTCTGATGCCACCAGCTTCACCGTCATCTATGCCGT 728
|||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 617 CGGTGGTCACAGGCAGATCCGTTCTTCCGATGCCACCAGCTTCACCATCATCTATGCCGT 676
Query 729 CTGCATTCTACTTGCTGCCTATCTCATGGCAGTGATGCTTGTTGAAGATTTCATTGATCT 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 677 CTGCATTCTACTTGCTGCCTATCTCATGGCAGTGATGCTTGTTGAAGATTTCATTCATCT 736
Query 789 TAGCCATTCAATCATCATTGCTTTCACCGTTGTCTTGTTTGCCATTCTTCTTGTACCCAT 848
||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||
Sbjct 737 TAGCCATTCAATCATCACTGCTTTCACCATTGTCTTGTTTGCAATTCTTCTTGTACCCAT 796
Query 849 CTTCATACCAATCGCAACGAGTTGCTTCACAGCATCAACCGACCCCTGTGACACGCTCGA 908
||||||||||||||| ||||||||||| | ||||||||| |||| ||||||||||| ||
Sbjct 797 CTTCATACCAATCGCGACGAGTTGCTT--C-GCATCAACCAACCCGTGTGACACGCTTGA 853
Query 909 AGAACCTCTCCTTGGCGATCAGCAAGGTCAGGATCCGGGACAGTCCACCACCCCTGACCA 968
|||||||||| |||| |||||||| | || ||||| |||||||||||||||||||||||
Sbjct 854 AGAACCTCTCGTTGGAAATCAGCAAAGCCAAGATCCAGGACAGTCCACCACCCCTGACCA 913
Query 969 TGGTCCTGAGCTTATATTTAGTGAAGTGGAAGACGAGAAACCAAAAGAAGTAGATTTGCT 1028
||||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 914 GGGTCCTGAGCTTATACTGAGCGAAGTGGAAGACGAGAAACCAAAAGAAGTAGATTTGCT 973
Query 1029 TCCTGCAGTGGAGAGACATAAGAGAATTGCTCAGTTGCAAGCAAAGCTGATGCAAGCAGC 1088
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 TCCTGCATTGGAGAGACATAAGAGAATTGCTCAGTTGCAAGCAAAGCTGATGCAAGCAGC 1033
Query 1089 TGCAGAGGGTGCTGTTCGGGTCAAGAGACGGAGGGGCCCTCACAGAGGCGAGGATTTTAC 1148
|||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1034 TGCAAAGGGTGCTGTTCGGGTCAAGAGACGGAGGGGGCCTCACAGAGGCGAAGATTTTAC 1093
Query 1149 TTTAACTCAAGCACTCGTTAAAGCCGATTTCTGGCTCATCTTCTTCTCCCTCTTGCTCGG 1208
||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1094 TTTAACTCAGGCACTCGTGAAAGCCGATTTCTGGCTCATTTTCTTCTCCCTCTTGCTCGG 1153
Query 1209 ATCTGGTTCGGGTCTAACGGTCATAGATAACCTTGGGCAGATGAGTCAGTCTCTCGGTTA 1268
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1154 TTCTGGTTCGGGTCTAACGGTAATAGATAACCTTGGGCAGATGAGTCAGTCTCTCGGTTA 1213
Query 1269 CGATAACACTCACGTCTTTGTGTCCATGATTAGCATTTGGAACTTCCTTGGACGCATTGG 1328
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1214 CGATAACACTCACGTTTTTGTGTCCATGATTAGCATTTGGAACTTCCTTGGACGCATTGG 1273
Query 1329 AGGCGGTTATTTCTCCGAACTCATCGTCAGGGACTATGCGTACCCAAGACCGGTTGCTAT 1388
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 TGGCGGCTATTTCTCCGAACTCATCGTCAGGGACTATGCGTACCCAAGACCGGTTGCTAT 1333
Query 1389 AGCAGTGGCTCAGCTTGTAATGTCAGTAGGACACATCTTCTTTGCATACGGATGGCCTGG 1448
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1334 AGCAGTGGCTCAGATTGTAATGTCAGTAGGACACATCTTCTTTGCATACGGATGGCCTGG 1393
Query 1449 AGCTATGCACATCGGCACACTATTGATTGGACTTGGCTATGGTGCTCACTGGGCCATCGT 1508
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1394 AGCTATGCATATCGGCACACTATTGATTGGACTCGGCTATGGTGCTCACTGGGCCATCGT 1453
Query 1509 CCCAGCCACTGCCTCTGAGCTCTTTGGTCTAAAGAAGTTTGGAGCTTTATACAATTTCCT 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1454 CCCAGCCACTGCCTCTGAGCTCTTTGGTCTAAAGAAGTTTGGAGCTTTATACAATTTCCT 1513
Query 1569 GACGCTGGCCAACCCAGC-GGGATCCTTAGTCTTTTCGGGGCTGATCGCAAGTTCCATTT 1627
|||||||||||||||||| ||| || |||||||||||||| || ||||||||||| ||||
Sbjct 1514 GACGCTGGCCAACCCAGCAGGG-TCATTAGTCTTTTCGGGTCTAATCGCAAGTTCTATTT 1572
Query 1628 ATGACCGCGAAGCAGAGAGGCAAGCACAAGGATCCTTGTTCAATCCTGACGATGTCCTGA 1687
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1573 ATGACCGCGAAGCAGAGAGGCAAGCACAAGGATCCTTGTTCAATCCTGACGACGTCCTGA 1632
Query 1688 GATGCCGAGGTTCCATCTGTTACTTCTTGACGTCACTCATAATGTCTGGATTCTGCCTCA 1747
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 GATGCCGGGGTTCCATCTGTTACTTCTTGACGTCACTCATAATGTCTGGATTCTGCCTCA 1692
Query 1748 TTGCGGCCGCCTTGAGTATGATCCTTGTGCAACGTACGAAGCCGGTTTACACAAATCTCT 1807
|||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||||
Sbjct 1693 TTGCAGCCGCCTTGAGTATGATTCTTGTGCAACGTACCAAATCGGTTTACACAAATCTCT 1752
Query 1808 ACGGCAAAACCCGCAACTGATTTTAAGATACCATATTACG 1847
||||||||||||||| ||||||||||||||||||||||||
Sbjct 1753 ACGGCAAAACCCGCAGCTGATTTTAAGATACCATATTACG 1792
> Ahg940882 jgi|Araly1|940882|scaffold_601426.1
Length=1865
Score = 1389 bits (752), Expect = 0.0
Identities = 1443/1773 (81%), Gaps = 61/1773 (3%)
Strand=Plus/Plus
Query 72 AATGGCGAGGACGACGCGAG-AAAGAGTGAAATCGTTCATAAACAATAGATGGCTAGTGT 130
||||||| ||| || |||| |||| || || ||||||||||| |||||||| || |
Sbjct 43 AATGGCGTCGACTACACGAGAAAAGTTTG-TGTCTTTCATAAACAACAGATGGCTCGTCT 101
Query 131 TTGTTGCGGCCATGTGGATTCAGTCTTGCGCTGGCATCGGTTACTTGTTCGGCAGCATCT 190
| || || ||||||||||| |||||||| |||||||||||||| |||||||| ||||| |
Sbjct 102 TCGTGGCTGCCATGTGGATACAGTCTTGTGCTGGCATCGGTTATTTGTTCGGAAGCATTT 161
Query 191 CTCCTGTCATCAAGAGCTCCCTCAACTACAACCAGAAACAGCTCT-CCAGGCTCGGTGTC 249
|||| || ||||| |||||| | ||||| || ||||| |||| | |||| || || |||
Sbjct 162 CTCCGGTTATCAAAAGCTCCTTAAACTATAATCAGAAGGAGCT-TGCCAGACTTGGAGTC 220
Query 250 GCCAAAGATCTCGGCGATAGTGTCGGCTTCCTCGCTGGTACTCTCTCCGAGATCTTGCCT 309
||||| |||||||| ||||||||||| ||| |||| || |||||||| ||||||||||||
Sbjct 221 GCCAAGGATCTCGGTGATAGTGTCGGATTCATCGCCGGGACTCTCTCTGAGATCTTGCCT 280
Query 310 CTCTGGGCCGCTCTTCTCGTCGGCTCTGTCCAGAACCTTGTCGGCTATGGCTGGGTTTGG 369
| |||||||||||||| || ||| | || |||||||| |||| || || |||||||||
Sbjct 281 ATTTGGGCCGCTCTTCTTGTTGGCGCCGTTCAGAACCTCATCGGTTACGGATGGGTTTGG 340
Query 370 CTTATCGTCACCGGTCGTGCTCCC-ATTCTTCCTTTATGGGCTATGTGTATCCTCATTTT 428
||||| |||||| ||||| ||| ||||| ||| |||||||||||||| | ||||| ||
Sbjct 341 CTTATAACCACCGGCCGTGC-CCCGATTCTGCCTCTATGGGCTATGTGTGTTCTCATATT 399
Query 429 TGTTGGGAACAACGGGGAGACCTACTTCAACACCGCTGCATTAGTTTCTGGTGTTCAGAA 488
||||||||||| || || ||||||||||| || | |||||||| ||||||||||| ||
Sbjct 400 CGTTGGGAACAATGGAGAAACCTACTTCAATACTGGAGCATTAGTCTCTGGTGTTCAAAA 459
Query 489 CTTTCCCAAGAGCCGTGGTCCTGTCGTCGGTATCCTCAAGGGGTTTGCTGGCCTCGGCGG 548
||||||||||||||| ||||| || || ||||| ||||||||||||||||| || || ||
Sbjct 460 CTTTCCCAAGAGCCGAGGTCCAGTGGTGGGTATTCTCAAGGGGTTTGCTGGGCTAGGTGG 519
Query 549 TGCCATCCTCTCCCAGGTATACACAATGATCCACTCCTCTGA-CCGTGCATCCCTCA-TC 606
||| ||| |||| ||| |||| |||||||||||||| ||| | ||| || || |||| ||
Sbjct 520 TGCGATCATCTCTCAGATATATACAATGATCCACTCATCTAACCCG-GCTTCTCTCATTC 578
Query 607 TTCATGGTTGCTGTTGCCCCTTCAGTTGTTGTTG-TTCCTCTCATGTTCTTCATCAGACC 665
||||||| |||||| | ||| ||||||| |||| || | ||||||||||||||||||||
Sbjct 579 -TCATGGTCGCTGTTACGCCTGCAGTTGTCGTTGTTTGC-CTCATGTTCTTCATCAGACC 636
Query 666 CGTCGGTGGTCAC-AGACAGATCCGTTCTTCTGATGCCA-CCAGCTTCACCGTCATCTAT 723
||||||||||||| || ||||||||| | ||||||| | ||||||| || |||||||
Sbjct 637 CGTCGGTGGTCACAAG-CAGATCCGTCCATCTGATG-GAGCCAGCTTTACTTTCATCTAC 694
Query 724 GCCGTCTGCATTCTACTTGCTGCCTATCTCATGGCAGTGATGCTTGTTGAAGATTTCATT 783
| |||||| ||||||| |||||||||||||||||||| |||||| || ||||||| |
Sbjct 695 GGTGTCTGCCTTCTACTCGCTGCCTATCTCATGGCAGTTATGCTTATTCAAGATTTGGTC 754
Query 784 GATC-TTAGCCATTC-A-ATCATCATTGCT-TTCACCGTTGTCTTGTTTGCCATTCTTCT 839
| || ||||||| | | ||||||| | | |||||| |||| ||||||| ||||||| |
Sbjct 755 G-TCGTTAGCCA--CAACATCATCACCG-TGTTCACCATTGTGTTGTTTGTCATTCTTGT 810
Query 840 TGTACCCATCTTCATACCAATCGCAACGAGTTGCTTCACAGCA-TCAACCGACCCCTG-T 897
||| || ||||| | ||||| || |||| |||||| | | ||| ||| |||| |
Sbjct 811 TGTTCCAATCTTGGTTCCAATTATGACAAGTTTCTTCAC-GGAGACAAACGA-GCCTGAT 868
Query 898 GACACGCTCGAAGAACCTCTCCTTGGCGATCAGCAAGGTCAGGATCCGGGACAGTCCACC 957
||||| | |||| | | || |||| | || || | | || || || | |||
Sbjct 869 GACACAATAGAAG-AGC-CT-CTTGTC--CCA-AAACGAGAAGA-CCAAGA-A--CCAGG 918
Query 958 ACCCCTGACCATGGTCCTGAGCTTATATTTAGTGAAGTGGAAGACGAGAAACCAAAAGAA 1017
| | |||| ||||| || || || |||||||||||||| ||||| ||||||||
Sbjct 919 AATGCAGACC-----CCTGACCTAATCTTGAGTGAAGTGGAAGATGAGAAGCCAAAAGAT 973
Query 1018 GTAGATTTGCTTCCTGCAGT-GGAGAGACATAAGAGAATTGCTCAGTTGCAAGCAAAGCT 1076
|| |||||||||||||| | |||||||||||||||||||| || ||||||||| ||||
Sbjct 974 GTTGATTTGCTTCCTGC-CTCAGAGAGACATAAGAGAATTGCGCATTTGCAAGCACAGCT 1032
Query 1077 GATGCAAGCAGCTGCAG-AGGGTGCTGTTCGGGTCAAGAGACGGAG-GGGCCCTCACAGA 1134
||||| |||||||||| |||| || |||||||| ||||||||||| ||| || ||||||
Sbjct 1033 AATGCAGGCAGCTGCAGAAGGG-GCGGTTCGGGTGAAGAGACGGAGAGGG-CCGCACAGA 1090
Query 1135 GGCGAGGATTTTACTTTAACTCAAGCACTCGTTAAAGCCGATTTCTGGCTCATCTTCTTC 1194
|| || ||||| ||| |||| || ||||| || |||||||| ||||||||||| ||||||
Sbjct 1091 GGGGAAGATTTCACTCTAACGCAGGCACTGGTGAAAGCCGACTTCTGGCTCATATTCTTC 1150
Query 1195 TCCCT-CTTGCTCGGATCTGGTTCGGGTCTAACGGTCATAGATAACCTTGGGCAGATGAG 1253
|| || | ||||||| |||||||||||| | || || || || || ||||| ||||||||
Sbjct 1151 TCTCTGC-TGCTCGGTTCTGGTTCGGGTTTGACAGTAATTGACAATCTTGGTCAGATGAG 1209
Query 1254 TCAGTCTCTCGGTTACGATAACACTCACGT-CTTTGTGTCCATGATTAGCATTTGGAACT 1312
||||||||| || || |||||||||||||| | ||||||| |||||||||||||||||||
Sbjct 1210 TCAGTCTCTTGGATATGATAACACTCACGTGC-TTGTGTCTATGATTAGCATTTGGAACT 1268
Query 1313 TCCTTGGACGCATTGGAGGCGGTTATTTCTCCGAACTCATCGTCAGGGACTATGCGTACC 1372
| ||||||||||| || |||||||||||||| || ||| | ||||||||||| ||||| |
Sbjct 1269 TTCTTGGACGCATAGGCGGCGGTTATTTCTCGGAGCTCGTTGTCAGGGACTACGCGTATC 1328
Query 1373 CAAGACCGGTTGCTATAGCAGTGGCTCAGCTTGTAATGTCAGTAGGACACATCTTCTTTG 1432
|||||||||| || || || ||||||||||| ||||||| |||||||||||||||||||
Sbjct 1329 CAAGACCGGTAGCAATGGCTGTGGCTCAGCTAATAATGTCTGTAGGACACATCTTCTTTG 1388
Query 1433 CATACGGATGGCCTGGAGCTATGCACATCGGCACACTATTGATTGGACTTGGCTATGGTG 1492
| ||||||||||| ||||| ||| |||| ||||| || ||||||||||| || || ||||
Sbjct 1389 CGTACGGATGGCCCGGAGCGATGTACATTGGCACGCTGTTGATTGGACTCGGATACGGTG 1448
Query 1493 CTCACTGGGCCATCGTCCCAGCCACTGCCTCTGAGCTCTTTGGTCTAAAGAAGTTTGGAG 1552
| |||||||| || |||||||| || |||||||||||||||||||| |||||||||||||
Sbjct 1449 CCCACTGGGCTATTGTCCCAGCTACAGCCTCTGAGCTCTTTGGTCTGAAGAAGTTTGGAG 1508
Query 1553 CTTTATACAATTTCCTGACGCTGGCCAACCCAGCGGGATCCTTAGTCTTTTCGGGGCTGA 1612
||||||||||||||||||| ||||| ||||| || |||||| | || || |||||| |||
Sbjct 1509 CTTTATACAATTTCCTGACACTGGCAAACCCGGCTGGATCCCTCGTGTTCTCGGGGATGA 1568
Query 1613 TCGCAAGTTCCATTTATGACCGCGAAGCAGAG-AGGCAAGCACAAGGATCCTTGTTCAAT 1671
| || ||| || |||||||| |||||||| || ||||| || || ||| |||| ||
Sbjct 1569 TTGCGAGTAGTATCTATGACCGAGAAGCAGAACAG-CAAGCTCATGGGTCCGTGTTTGAT 1627
Query 1672 CCTGACGATGTCCTGAGATGCCGA-GGTTCCATCTGTTACTTCTTGACGTCACTCATAAT 1730
|| || || | ||| |||||| | ||||| ||||||| |||||||||||||||| ||||
Sbjct 1628 CCAGATGACGCCCTTAGATGCA-ATGGTTCTATCTGTTTCTTCTTGACGTCACTCGTAAT 1686
Query 1731 GTCTGGATTCTGCCTCATTGCG-GCCGCCTTGAGTATGATCCTTGTGCAACGTACGAAG- 1788
||||||||||||| |||| || || | ||||||||||| ||||||| ||||| |||
Sbjct 1687 GTCTGGATTCTGCATCATCGCTTGCATC-TTGAGTATGATTCTTGTGCGTCGTACCAAGT 1745
Query 1789 CCGGTTTACACAAATCTCTACGGCAAAACCCGC 1821
||| ||||||| ||||||| ||||| ||||||
Sbjct 1746 CCG-TTTACACTCATCTCTATGGCAAGACCCGC 1777
> Ahg927561 jgi|Araly1|927561|scaffold_300018.1
Length=807
Score = 355 bits (192), Expect = 7e-97
Identities = 198/201 (99%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 69 AAAAATGGCGAGGACGACGCGAGAAAGAGTGAAATCGTTCATAAACAATAGATGGCTAGT 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 17 AAAAATGGCGAGGACGACGCGAGAAAGAGTGAAATCGTTCATAAACAATAGATGGTTAGT 76
Query 129 GTTTGTTGCGGCCATGTGGATTCAGTCTTGCGCTGGCATCGGTTACTTGTTCGGCAGCAT 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77 GTTTGTTGCGGCCATGTGGATTCAGTCTTGCGCTGGCATCGGTTACTTGTTCGGCAGCAT 136
Query 189 CTCTCCTGTCATCAAGAGCTCCCTCAACTACAACCAGAAACAGCTCTCCAGGCTCGGTGT 248
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 137 CTCTCCTGTCATCAAAAGCTCCCTCAACTACAACCAGAAGCAGCTCTCCAGGCTCGGTGT 196
Query 249 CGCCAAAGATCTCGGCGATAG 269
|||||||||||||||||||||
Sbjct 197 CGCCAAAGATCTCGGCGATAG 217
> Ahg927560 jgi|Araly1|927560|scaffold_300017.1
Length=807
Score = 355 bits (192), Expect = 7e-97
Identities = 198/201 (99%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 69 AAAAATGGCGAGGACGACGCGAGAAAGAGTGAAATCGTTCATAAACAATAGATGGCTAGT 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 17 AAAAATGGCGAGGACGACGCGAGAAAGAGTGAAATCGTTCATAAACAATAGATGGTTAGT 76
Query 129 GTTTGTTGCGGCCATGTGGATTCAGTCTTGCGCTGGCATCGGTTACTTGTTCGGCAGCAT 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77 GTTTGTTGCGGCCATGTGGATTCAGTCTTGCGCTGGCATCGGTTACTTGTTCGGCAGCAT 136
Query 189 CTCTCCTGTCATCAAGAGCTCCCTCAACTACAACCAGAAACAGCTCTCCAGGCTCGGTGT 248
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 137 CTCTCCTGTCATCAAAAGCTCCCTCAACTACAACCAGAAGCAGCTCTCCAGGCTCGGTGT 196
Query 249 CGCCAAAGATCTCGGCGATAG 269
|||||||||||||||||||||
Sbjct 197 CGCCAAAGATCTCGGCGATAG 217
> Ahg927559 jgi|Araly1|927559|scaffold_300016.1
Length=807
Score = 355 bits (192), Expect = 7e-97
Identities = 198/201 (99%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 69 AAAAATGGCGAGGACGACGCGAGAAAGAGTGAAATCGTTCATAAACAATAGATGGCTAGT 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 17 AAAAATGGCGAGGACGACGCGAGAAAGAGTGAAATCGTTCATAAACAATAGATGGTTAGT 76
Query 129 GTTTGTTGCGGCCATGTGGATTCAGTCTTGCGCTGGCATCGGTTACTTGTTCGGCAGCAT 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77 GTTTGTTGCGGCCATGTGGATTCAGTCTTGCGCTGGCATCGGTTACTTGTTCGGCAGCAT 136
Query 189 CTCTCCTGTCATCAAGAGCTCCCTCAACTACAACCAGAAACAGCTCTCCAGGCTCGGTGT 248
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 137 CTCTCCTGTCATCAAAAGCTCCCTCAACTACAACCAGAAGCAGCTCTCCAGGCTCGGTGT 196
Query 249 CGCCAAAGATCTCGGCGATAG 269
|||||||||||||||||||||
Sbjct 197 CGCCAAAGATCTCGGCGATAG 217
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77285107105
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5