BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT3G03090.1

Length=1995
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg477555 jgi|Araly1|477555|fgenesh2_kg.3__256__AT3G03090.1         2532    0.0  
  Ahg941201 jgi|Araly1|941201|scaffold_601745.1                       1345    0.0  


> Ahg477555 jgi|Araly1|477555|fgenesh2_kg.3__256__AT3G03090.1
Length=2031

 Score = 2532 bits (1371),  Expect = 0.0
 Identities = 1582/1684 (94%), Gaps = 14/1684 (1%)
 Strand=Plus/Plus

Query  22    TTGTCGTCTCCCTTCCTCACGTTTCTCTCCTCTGCAAATTCGAAGCTCCGTTGAGCTCGA  81
             |||||||||||| |||||||||||||||| ||||| ||||||||||| ||| ||||||||
Sbjct  1     TTGTCGTCTCCCGTCCTCACGTTTCTCTCGTCTGCGAATTCGAAGCT-CGTAGAGCTCGA  59

Query  82    ATCAGAGAAGTAGCTATTTCGTACAACCCCAGAACGATATAtttttttCTGGGTTTCCTT  141
             |||||| |||| |||| ||||||||| |||||||  | | || ||||||||||  |||||
Sbjct  60    ATCAGACAAGTTGCTAATTCGTACAAGCCCAGAA--AGAGATCTTTTTCTGGGCCTCCTT  117

Query  142   GAACATACCACACTCACG-GTCACGGGATCCATACCAAGCTTCCGTAGCCATGGGGTTTG  200
             ||||| |||||||||||| ||  ||||||||||| ||||||||| |||||||||||||||
Sbjct  118   GAACAAACCACACTCACGTGTGTCGGGATCCATATCAAGCTTCCTTAGCCATGGGGTTTG  177

Query  201   ATCCCGAGAACCAATCGATCTCTTCCGTTGGACAGGTTGTTGGTGATTCTTCTTCAGGTG  260
             ||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||||||
Sbjct  178   ATCCCGAGAACCAATCGATTTCTTCCGTTGGACA-G--GTTGGTGATTCTTCTTCAGGTG  234

Query  261   GGATTACTGCTGAAAAGGAACCTTTGTTAAAGGAAAACCACAGCCCAGAGAACTACTCTG  320
              ||| | |||| |||||||||||||| |||| || || ||||||||||| ||||||||||
Sbjct  235   AGATCAATGCTCAAAAGGAACCTTTGATAAAAGAGAATCACAGCCCAGAAAACTACTCTG  294

Query  321   TTCTTGCAGCCATTCCTCCGTTTCTCTTTCCAGCTCTTGGAGCATTGCTTTTTGGTTATG  380
             |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||
Sbjct  295   TTCTTGCAGCCATTCCCCCGTTTCTTTTTCCAGCTCTTGGAGCGTTGCTTTTTGGTTATG  354

Query  381   AAATTGGTGCAACATCTTGTGCTATCATGTCTCTTAAGTCGCCTACTCTAAGTGGAATTT  440
             |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| 
Sbjct  355   AAATTGGTGCGACATCTTGTGCTATCATGTCTATTAAGTCGCCTACTCTAAGTGGAATTA  414

Query  441   CATGGTACGACTTGTCTTCAGTGGATGTTGGTATAATTACCAGTGGCTCACTGTATGGTG  500
             |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct  415   CATGGTACGACTTGTCTTCAGTCGATGTTGGTATACTTACCAGTGGCTCACTGTATGGTG  474

Query  501   CCTTAATTGGCTCCATTGTTGCATTTAGTGTTGCCGACATTATAGGAAGGAGAAAGGAGC  560
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  475   CCTTAATTGGCTCCATTGTTGCATTTAGTGTTGCCGACATTATAGGAAGGAGAAAGGAGC  534

Query  561   TGATTTTGGCTGCATTCTTGTATCTTGTTGGAGCCATTGTGACTGTAGTAGCACCTGTCT  620
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct  535   TGATTTTGGCTGCATTCTTGTATCTTGTCGGAGCCATTGTGACTGTAGTAGCACCTGTCT  594

Query  621   TTTCCATACTGATAATTGGACGAGTTACGTATGGCATGGGGATTGGACTGACCATGCACG  680
             |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct  595   TTTCCATACTGATAATTGGACGAGTTACTTATGGCATGGGGATTGGACTGACAATGCACG  654

Query  681   CGGCTCCAATGTACATTGCAGAGACTGCTCCAAGTCAAATACGTGGACGGATGATATCAC  740
             ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct  655   CGGCTCCAATGTACATTGCGGAGACTGCTCCTAGTCAAATACGTGGACGGATGATATCAC  714

Query  741   T-AAAGGAATTCTCCACTGTCCTTGGGATGGTTGGGGGTTATGGAATCGGTAGCCTTTGG  799
             | ||||||||| |||||||| |||||||||||||    ||||||||||||||||||||||
Sbjct  715   TGAAAGGAATTTTCCACTGTTCTTGGGATGGTTG----TTATGGAATCGGTAGCCTTTGG  770

Query  800   ATTACGGTTATTTCTGGTTGGCGTTACATGTACGCAACAATTCTCCCTTTTCCAGTTATT  859
              |||||||| ||||||| |||||||  ||||||||||||||||||||||| |||||||||
Sbjct  771   GTTACGGTTTTTTCTGGCTGGCGTTGTATGTACGCAACAATTCTCCCTTTGCCAGTTATT  830

Query  860   ATGGGAACTGGAATGTGTTGGCTACCAGCATCTCCGAGGTGGCTTTTACTGCGCGCTCTC  919
             ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  831   ATGGGAATTGGAATGTGTTGGCTACCAGCATCTCCGAGGTGGCTTTTATTGCGCGCTCTC  890

Query  920   CAGGGACAAGGAAATGGGGAGAATCTTCAACAGGCTGCGATTAGATCTCTTTGTCGCCTT  979
             ||| || |||| |||| ||||||||||||||||||||| ||||| |||||| ||||||||
Sbjct  891   CAGAGAAAAGGGAATGTGGAGAATCTTCAACAGGCTGCAATTAGGTCTCTTCGTCGCCTT  950

Query  980   AGAGGGTCTGTCATAGCTGACTCAGCAGCTGAACAAGTAAACGAAATATTGGCTGAACTT  1039
             |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct  951   AGAGGGTCTGCCATAGCTGACTCAGCAGCTGAACAAGTAAACGAGATCTTGGCTGAACTT  1010

Query  1040  TCCCTTGTGGGTGAAGACAAAGAAGCTACATTTGGTGAATTATTTCGAGGCAAATGCTTG  1099
             ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  1011  TCCTTTGTAGGTGAGGACAAAGAAGCTACATTTGGTGAATTATTTCGAGGCAAATGCTTA  1070

Query  1100  AAAGCTCTCACTATAGCAGGAGGGTTAGTCTTGTTCCAACAGATAACTGGGCAACCAAGT  1159
             ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1071  AAAGCTCTCAAAATTGCAGGAGGGTTAGTCTTGTTCCAACAGATAACTGGGCAACCAAGT  1130

Query  1160  GTACTATATTATGCACCATCAATACTACAGACTGCCGGCTTTTCTGCTGCAGCTGATGCA  1219
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1131  GTACTTTATTATGCACCATCAATACTACAGACTGCCGGCTTTTCTGCTGCAGCTGATGCA  1190

Query  1220  ACTCGGATCTCAATTCTGCTCGGCCTATTGAAGTTGGTTATGACAGGAGTTTCTGTGATA  1279
             ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct  1191  ACTCGGATCTCAATTCTGCTCGGTCTATTGAAGTTGGTTATGACAGGAGTTTCTGTTATA  1250

Query  1280  GTTATCGACAGAGTTGGAAGGAGACCTTTACTTCTTTGTGGTGTTAGCGGAATGGTGATC  1339
             ||||| |||||||||||||||||||||||||||||| | |||||||| || |||||||||
Sbjct  1251  GTTATTGACAGAGTTGGAAGGAGACCTTTACTTCTTGGCGGTGTTAGTGGCATGGTGATC  1310

Query  1340  TCATTGTTCCTCCTGGGATCCTACTACATGTTTTATAAAAATGTACCAGCTGTTGCTGTA  1399
             ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||
Sbjct  1311  TCATTGTTCCTCCTGGGGTCCTACTACATCTTTTATAAAAGTGTACCAGCTGTTGCTGTA  1370

Query  1400  GCTGCATTGCTACTGTATGTAGGCTGTTACCAGCTGTCCTTTGGCCCTATTGGTTGGCTG  1459
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  1371  GCTGCATTGCTACTGTATGTAGGCTGTTACCAGCTATCCTTTGGCCCTATTGGTTGGCTG  1430

Query  1460  ATGATTTCAGAGATATTTCCCTTAAAATTAAGAGGTAGAGGAATCAGTCTAGCAGTGCTT  1519
             |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct  1431  ATGATTTCAGAGATATTTCCCTTAAAATTAAGAGGTCGAGGAATCAGTCTAGCAGTTCTT  1490

Query  1520  GTGAATTTTGGCGCAAACGCACTTGTGACATTCGCTTTCTCACCGCTAAAGGAGCTGTTA  1579
             |||||||| || ||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct  1491  GTGAATTTCGGAGCAAACGCACTAGTGACATTCGCTTTCTCACCTCTAAAGGAGCTGTTA  1550

Query  1580  GGAGCTGGAATACT-GTTCTGTGCATTTGGAGTGATATGTGTCGTGTCTCTCTTCTTCAT  1638
             ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  1551  GGAGCTGGAAT-CTTGTTCTGTGCATTTGGAGTGATATGTGTAGTGTCTCTCTTCTTCAT  1609

Query  1639  ATACTACATTGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTGAAGCCAAATGTCT  1698
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1610  ATACTACATAGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTGAAGCCAAATGTCT  1669

Query  1699  CTAA  1702
             ||||
Sbjct  1670  CTAA  1673


 Score =  359 bits (194),  Expect = 5e-98
 Identities = 211/219 (96%), Gaps = 2/219 (1%)
 Strand=Plus/Plus

Query  1571  GAGCTGTTAGGAGCTGGAATAC-TGTTCTGTGCATTTGGAGTGATATGTGTCGTGTCTCT  1629
             |||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||
Sbjct  1674  GAGCTGTTAGGAGCTGGAAT-CTTGTTCTGTGCATTTGGAGTGATATGTGTAGTGTCTCT  1732

Query  1630  CTTCTTCATATACTACATTGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTGAAGC  1689
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1733  CTTCTTCATATACTACATTGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTGAAGC  1792

Query  1690  CAAATGTCTCTAAAAGGTTACTCATCTTAGCTCCACTTTCTGTGCTGCTTCATTGCTTGA  1749
             ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct  1793  CAAATGTCTCTAAAAGGTTTCTCATCTTAGCTCCACTTTCTCTGCTGCTTCATTGCTTGA  1852

Query  1750  GGATCTAAATCGCAAACGCACCAGCCGCATGTGTAGTCA  1788
             |||||| |||||||||||||||||||||| ||| |||||
Sbjct  1853  GGATCTGAATCGCAAACGCACCAGCCGCAGGTGGAGTCA  1891


 Score =  141 bits (76),  Expect = 2e-32
 Identities = 132/156 (85%), Gaps = 16/156 (10%)
 Strand=Plus/Plus

Query  1817  ACTGTTTGGATATCTTTTAAAGAATGGTTGTATCTAGCGGCAAAATTTGGTGCGTTGGAA  1876
             |||||||||||| |||| |||||||||||| |||| || ||||||||||||||||| |  
Sbjct  1892  ACTGTTTGGATAACTTTAAAAGAATGGTTGCATCTCGCTGCAAAATTTGGTGCGTT-G--  1948

Query  1877  AAGTTTTAAAATTCGAAAGTTTGCTTAATTTGTATTTTAAAACACGCATTCAAAATTTTG  1936
               |       |  |  ||||||||||||||||||| |||||| |||| ||||||||||||
Sbjct  1949  --G-------A--C--AAGTTTGCTTAATTTGTATGTTAAAATACGCGTTCAAAATTTTG  1995

Query  1937  TGATTGTATGAAAATAATGTGAGATTCAAAATTTTA  1972
             ||||||||||||||||||||||||||||||||||||
Sbjct  1996  TGATTGTATGAAAATAATGTGAGATTCAAAATTTTA  2031


> Ahg941201 jgi|Araly1|941201|scaffold_601745.1
Length=1549

 Score = 1345 bits (728),  Expect = 0.0
 Identities = 1224/1459 (84%), Gaps = 52/1459 (4%)
 Strand=Plus/Plus

Query  272   GAAAAGGAACCT-TTGTTAAAGGAAAACCACAGC-CCAGAGAACTACTCTGTTCTTGCAG  329
             |||| ||| ||| || ||||| || || || | | ||||| |||||||||||  ||||||
Sbjct  99    GAAAGGGAGCCTCTTATTAAA-GAGAATCATA-CTCCAGAAAACTACTCTGTGGTTGCAG  156

Query  330   CCATTCCT-CCGTTTCTCTTTCCAGCTCTTGGAGCA-TTGCTTTTTGGTTATGAAATTGG  387
             ||||| || |||||| ||||||||||||| |||| | || |||| |||||||||||||||
Sbjct  157   CCATT-CTCCCGTTTTTCTTTCCAGCTCTCGGAGGACTT-CTTTATGGTTATGAAATTGG  214

Query  388   TGCAACATCTTGTGCTATCATGTCTCTTAAGTCGCCTAC-TCTAAGTGGAATTTCATGGT  446
             |||||| |||||||| | ||| || ||| |||||||| | | |||||||||| |||||||
Sbjct  215   TGCAACTTCTTGTGCAACCATTTCACTTCAGTCGCCTTCAT-TAAGTGGAATATCATGGT  273

Query  447   ACGACTTGTCTTCAGTGGATGTTGGTATAATTACCAGTGGCTCACTGTATGGTGCCTTAA  506
             || ||||||| ||||||||||||||| || |||||||||||||||| || ||||| ||| 
Sbjct  274   ACAACTTGTCCTCAGTGGATGTTGGTTTAGTTACCAGTGGCTCACTTTACGGTGCATTAT  333

Query  507   TTGGCTCCATTGTTGCATTT-AGTGTTGCCGACATTATAGGAAGGAGAAAGGAGCTGATT  565
             ||||||| ||||| || ||| | | | || ||| |||||||||| |||||||||||||||
Sbjct  334   TTGGCTCAATTGTGGC-TTTCACTATCGCTGACGTTATAGGAAGAAGAAAGGAGCTGATT  392

Query  566   TTGGCTGCATTCTTGTATCTTGTTGGAGCCATTGTGACTGTAGTAGCACCTGTCTTTTCC  625
             ||||||||||| |||||||| ||||||||| ||||||||| | |||||||   || ||||
Sbjct  393   TTGGCTGCATTATTGTATCTCGTTGGAGCCCTTGTGACTGCACTAGCACCAACCTATTCC  452

Query  626   ATACTGATAATTGGACGAGTTACGTATGGCATGGGGA-TTGGACTGACCATGCACGCGGC  684
              |  ||||||||||||| ||||| |||||  |    | |||||||| | ||||| |||||
Sbjct  453   GTTTTGATAATTGGACGGGTTACTTATGGGGT-CTCAGTTGGACTGGCAATGCATGCGGC  511

Query  685   TCCAATGTACATTGCAGAGACTGCTCCAAGTCAAATACGTGGACGGATGATATCACTAAA  744
             ||| ||||||||||||||||||||||||||||  |||||||||| | || ||||||||||
Sbjct  512   TCCGATGTACATTGCAGAGACTGCTCCAAGTCCGATACGTGGACAGCTGGTATCACTAAA  571

Query  745   GGAATTCTCCACT-GTCCTTGGGATGGTTGGGGGTTATGGAATCGGTAGCCTTTGGATT-  802
              ||||||| || | ||||||||||||||||| ||||||||||||||||| |||   | | 
Sbjct  572   AGAATTCTTCA-TAGTCCTTGGGATGGTTGGAGGTTATGGAATCGGTAGTCTTAC-AGTC  629

Query  803   ACGGTT-ATTTCTGGTTGGCGTTACATGTACGCAACAATTCTCCCTTTTCCAGTTATTAT  861
             |   || ||| |||||||||| |||||||| ||||||| | |||||||  ||||||||||
Sbjct  630   AATATTCATT-CTGGTTGGCGGTACATGTATGCAACAAGTGTCCCTTTGGCAGTTATTAT  688

Query  862   GGGAACTGGAATGTGTTGGCTACCAGCATCTCCGAGGTGGCTTTTACTGCGCGCTC-TCC  920
             ||||| ||| ||||| ||||| |||||||| || ||||||||||| ||||||| || | |
Sbjct  689   GGGAATTGGCATGTGGTGGCTCCCAGCATCCCCTAGGTGGCTTTTGCTGCGCG-TCATAC  747

Query  921   AGGG-ACAAGGAAATGGGGAGAATCTTCAAC-AG-G-CTGCGATTAGATCTCTTTGTCGC  976
             |||| | |||| |||| |||||| |  |||| || | |||| || | |||||| || |||
Sbjct  748   AGGGGA-AAGGGAATGTGGAGAA-C--CAACGAGAGTCTGCAATCAAATCTCTCTGCCGC  803

Query  977   CTTAGAGGGTCTG-TCATAGCTGACTCAGCAGCTGAACAAGTAAACGAAATATTGGCTGA  1035
             ||||||||  ||| |  | | ||| ||||| |||||||||||||| || || ||||||||
Sbjct  804   CTTAGAGGCCCTGCTTTT-GTTGATTCAGCTGCTGAACAAGTAAATGAGATTTTGGCTGA  862

Query  1036  ACTTTCCCTTGTGGGTGAAGACAAAGAAG-CTACATTTGGTGAATTATTTCGA-GGCAAA  1093
             |||| |  ||||||| || || ||||||| | || |||||||||||||||| | || || 
Sbjct  863   ACTTACTTTTGTGGGAGAGGATAAAGAAGTC-ACTTTTGGTGAATTATTTC-ATGGGAAG  920

Query  1094  TGCTTGAAAGCTCTCA-CTATAGCAGGAGGGT-TAGTCTTGTTCCAACAGATAACTGGGC  1151
             |||||||||||||||| | |||| |||||| | |||||||||| ||||||||||||||||
Sbjct  921   TGCTTGAAAGCTCTCATC-ATAGGAGGAGG-TCTAGTCTTGTTTCAACAGATAACTGGGC  978

Query  1152  AACCAAGTGTACTATATTATGCACCATCAATACTACAGACTGCCGGCTTTTCTGCTGCAG  1211
             |||||||||| || |||||||||||||||||||| ||||| || ||||||||||| ||||
Sbjct  979   AACCAAGTGTGCTTTATTATGCACCATCAATACTGCAGACCGCTGGCTTTTCTGCCGCAG  1038

Query  1212  CTGATGCAACTCGGATCTCAATTCTGCTCGGCCTATTGAAGTTGGTTATGACAGGAGTTT  1271
              |||||||||  || |||||||||| || || |||||||||||| |||||||||||||  
Sbjct  1039  GTGATGCAACAAGGGTCTCAATTCTACTTGGTCTATTGAAGTTGATTATGACAGGAGTAG  1098

Query  1272  CTGT-GATAGTTATCGACAGAGTTGGAAGGAGACCTTTACTTCTTTGTGGTGTTAGCGGA  1330
             |||| | |||||||||||||| ||||||||||||||||||||||| | ||||| || || 
Sbjct  1099  CTGTTG-TAGTTATCGACAGACTTGGAAGGAGACCTTTACTTCTTGGCGGTGTCAGTGGC  1157

Query  1331  ATGGT-GATCTCATTGTTCCTCCT-GGGATCCTACTACATGTTTTATAAAAATGT-ACCA  1387
             ||||| | ||||||| ||||| || ||| || |||||| | |||| | |     | ||||
Sbjct  1158  ATGGTTG-TCTCATTATTCCTGCTAGGG-TCATACTACCTCTTTT-TCAGCGCCTCACCA  1214

Query  1388  GCTGTTGCTGTAGCTGCATTGCTACTGTATGTAGGCTGTTACCAGCTGTCCTTTGGCCCT  1447
             | ||||||||||| |||| |||| || ||||| |||||||||||||| |||||||| || 
Sbjct  1215  GTTGTTGCTGTAGTTGCACTGCTGCTTTATGTGGGCTGTTACCAGCTATCCTTTGGTCCA  1274

Query  1448  ATTGGTTGGCTGATGATTTCAGAGATATTTCCC-TTAAAATTAAGAGGTAGAGGAATCAG  1506
             ||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||  ||||
Sbjct  1275  ATTGGTTGGCTGATGATTTCAGAGATATTTCCCCTTAAA-TTAAGAGGTCGAGGTCTCAG  1333

Query  1507  TCTAGCAGTGCTTGTGAATTTTGGCGCAAACGCACTTGTGACATTCGCTTTCTCACCGCT  1566
             ||| ||||||||||||||||| || || ||||||||||||||||| ||||| ||||| ||
Sbjct  1334  TCTGGCAGTGCTTGTGAATTTCGGTGCCAACGCACTTGTGACATTTGCTTTTTCACCCCT  1393

Query  1567  AAAGGAGCTGTTAGGAGCTGGAATACTGTTCTGTGCATTTGGAGTGATATGTGTCGT-GT  1625
             |||||| ||||| |||||||| |||||||| ||||  ||||| || |||||||| || ||
Sbjct  1394  AAAGGAACTGTTGGGAGCTGGGATACTGTTTTGTGGGTTTGGTGTAATATGTGT-GTTGT  1452

Query  1626  CTCTCTTCTTCATATACTACATTGTGCCAGAGACAAAGGGTCTCACTCTTGAAGAAATTG  1685
             ||||  ||||||||| || ||||||||||||||||||||| ||||||||||| |||||||
Sbjct  1453  CTCTGGTCTTCATATTCTTCATTGTGCCAGAGACAAAGGGCCTCACTCTTGAGGAAATTG  1512

Query  1686  AAGCCAAATGTCTCTAAAA  1704
             |||||||||||||||||||
Sbjct  1513  AAGCCAAATGTCTCTAAAA  1531



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 74999692405


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5