BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G04050.1
Length=1533
Score E
Sequences producing significant alignments: (Bits) Value
Ahg340564 jgi|Araly1|340564|fgenesh1_pg.C_scaffold_3000327 2433 0.0
Ahg898505 jgi|Araly1|898505|Al_scaffold_0005_2471 1533 0.0
Ahg898522 jgi|Araly1|898522|Al_scaffold_0005_2488 1522 0.0
> Ahg340564 jgi|Araly1|340564|fgenesh1_pg.C_scaffold_3000327
Length=1533
Score = 2433 bits (1317), Expect = 0.0
Identities = 1463/1535 (95%), Gaps = 4/1535 (0%)
Strand=Plus/Plus
Query 1 ATGGAGAAGTTACTTGCTGGACAAACAAACAATGGATCCCTCAAGTCAAAGACGAAGATC 60
|||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||
Sbjct 1 ATGGAGAAGTTACTTGCTGGACAAACCAACAATGGAGCCCTTAAGTCAAAGACGAAGATC 60
Query 61 GTCTGTACTCTCGGACCGGCTTCGAGATCGGTTGAGATGGTTGAGAAGCTTCTCAAAGCC 120
|| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 61 GTGTGTACTCTCGGACCTGCTTCGAGATCTGTTGAGATGGTTGAGAAGCTTCTCAAAGCC 120
Query 121 GGTATGAACGTAGCCCGGTTCAACTTCTCCCATGGTTCTCACTCATACCATCAAGAAACT 180
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 121 GGTATGAACGTAGCCCGGTTCAATTTCTCCCATGGTTCTCACTCGTACCATCAAGAAACT 180
Query 181 CTTGACAATCTCAGAACCGCCATGGAGAACACTTGTATTCCCTGTGCCGTCATGCTCGAC 240
|| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 181 CTCGACAATCTCAGAACCGCCATGGAAAACACTTGTATTCCTTGTGCCGTCATGCTCGAC 240
Query 241 ACCAAGGGTCCTGAGATCCGAACCGGGTTTCTCAAAGAAGGCAAACCGGTTGAGCTAATT 300
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 241 ACAAAGGGTCCTGAGATCCGAACCGGATTTCTCAAAGAAGGCAAACCGGTTGAGCTAATT 300
Query 301 CAAGGTCAAGAGATTACAATCTCAACTGATTACACCATGGAAGGAGATTCAAACACAATC 360
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 301 CAAGGTCAAGAGATCACAATCTCAACTGATTACACAATGGAAGGAGATTCAAACACAATC 360
Query 361 TCAATGAGTTACAAGAAACTTGCTGAAGATCTCAAGTCCGGTGACGTGATTCTCTGTTCC 420
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 361 TCCATGAGTTACAAGAAACTTGCTGAAGATCTCAAGTCCGGCGACGTGATTCTCTGTTCC 420
Query 421 GACGGTACAATCTCTCTTACCGTCTTGTCTTGTGACAAGAATCTCGGTCTTGTTCG-TGC 479
||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| ||
Sbjct 421 GACGGCACAATCTCTCTTACCGTCTTGGCCTGTGACAAGAATCTCGGTCTTGTTCGTTG- 479
Query 480 CCGTTGCGAGAACTCTGCAGTTCTTGGAGAAAGAAAGAACGTGAACCTCCCTGGAATCGT 539
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 480 CCGTTGCGAGAACTCTGCGGTTCTTGGAGAAAGAAAGAACGTGAACCTCCCTGGAATCGT 539
Query 540 AGTTGATCTTCCAACACTCACAGAGAAGGATCAAGAGGATATTCTCCAATGGGGAGTTCC 599
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 AGTTGATCTCCCAACACTCACAGAGAAGGATCAAGAGGATATTCTCCAATGGGGAGTTCC 599
Query 600 GAATAAGATCGATATCATCGCTCTTTCCTTTGTTCGTAAAGGATCTGATCTGGTCGAGGT 659
|||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 600 CAATAAGATTGATATCATCGCTCTTTCCTTTGTTCGTAAAGGATCTGATCTGGTGGAGGT 659
Query 660 CAGGAAGTTGCTTGGAGAGAACGCAAAGAGTATCATGCTCATGTCAAAGGTGGAGAATCA 719
|||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 660 CAGGAAATTGCTTGGAGAGCACGCAAAGAGTATCATGCTTATGTCAAAGGTGGAGAATCA 719
Query 720 AGAAGGAGTGATGAATTTTGACAAGATTCTGGA-ATATTCTGATGCATTCATGGTGGCTA 778
|||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct 720 AGAAGGAGTGATGAATTTCGACAAGATTCTGGAGA-ATTCTGATGCATTCATGGTGGCTA 778
Query 779 GAGGTGATTTAGGAATGGAGATTCCGATTGAAAAGATGTTTCTTGCTCAGAAGATGATGA 838
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 779 GAGGTGATTTAGGAATGGAGATTCCGATTGAGAAGATGTTTCTTGCTCAGAAGATGATGA 838
Query 839 TTCAGAAGGCTAATGCTCTTGGGAAGCCAATCGTCACAGCCACACAGATGCTTGAGTCAA 898
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 839 TTCAGAAGGCTAATGCTCTTGGGAAGCCAGTCGTCACAGCCACACAGATGCTTGAGTCAA 898
Query 899 TGACCAAATCTCCTCGTCCAACTAGAGCAGAAGCCACCGATGTAGCTAACGCTGTCCTTG 958
||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct 899 TGACCAAATCTCCTCGTCCGACTAGAGCCGAAGCCACCGATGTAGCTAACGCTGTTCTTG 958
Query 959 ACGGCACTGATTGCGTCATGCTCAGTGGAGAAACCGCCGCCGGAGCTCACCCTGAAACCG 1018
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 959 ACGGCACTGATTGCGTCATGCTCAGTGGAGAAACCGCAGCCGGAGCTCACCCTGAGACCG 1018
Query 1019 CCGTGCTAACAATGTCAAGAATCTGTAAGGAAGCAGAGGATTTCATCGATTACGACACAA 1078
||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||||
Sbjct 1019 CCGTGCTTACAATGTCAAGAATCTGTAAGGAGGCAGAGAATTTCATCGACTACGACACAA 1078
Query 1079 TGCACAAGAAGATTCAAGATATCGTTTCGTTGCCTTTATCTCCTATTGAGAGCTTGGCCG 1138
||||||||||||||||||||||||||||||||||| |||||||||| |||||||| || |
Sbjct 1079 TGCACAAGAAGATTCAAGATATCGTTTCGTTGCCTCTATCTCCTATCGAGAGCTTAGCTG 1138
Query 1139 CTTCAGCCGTTTCGACGGCGAGGAGTCTTTGTGCGGCTGCGATTGTCGTTCTAACCAAGG 1198
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 1139 CTTCAGCCGTTTCGACGGCTAGGAGTCTTTGTGCGGCTGCGATTGTGGTTCTAACCAAGG 1198
Query 1199 GAGGTTACACGGTGGAGCTTGTGGCCAAGTACAGGCCTAGTGTTCCGATTCTGTCCGTAA 1258
|||||||||||||||||||||| || |||||||||||||| ||||||||||| || || |
Sbjct 1199 GAGGTTACACGGTGGAGCTTGTTGCGAAGTACAGGCCTAGCGTTCCGATTCTTTCGGTGA 1258
Query 1259 TTGTGCCGGAGATTACTCGTACGGATGATTTCGAGTGGTCGTGCTCTGAATCTGCGGCTC 1318
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 1259 TTGTGCCGGAGATTACTCGTACCGATGATTTCGAGTGGTCGTGCTCTGAAACTGCGGCTC 1318
Query 1319 ATGTGGCAAGACGTGGTTTGATCTACCGTGGAATTGTTCCTGTGATGGCGACGGGAGCAT 1378
||||||| |||||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |
Sbjct 1319 ATGTGGCGAGACGTGGATTGATTTACCGTGGAATAGTTCCGGTGATGGCGACAGGAGCTT 1378
Query 1379 CCGCTAGGTCTTCGAACAAGGACTCGACGGAGGAGACGATTCAATTCGCCATTGAATTCG 1438
| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct 1379 CTGCTAGGTCTTCGAACAAGGATTCGACGGAGGAGACGATTAAATTCGCCATTGAATTTG 1438
Query 1439 CGAAGAAGAAGGGAATATGTAAGACAGGAGACTCGATTGTGGCGTTGCACAAGATCGATG 1498
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1439 CGAAGAAGAAGGGAATATGTAAGGCGGGAGACTCGATTGTGGCGTTGCACAAGATCGATG 1498
Query 1499 GCTCCTCTGTTGTCAAGATTTTGAACGTGGAGTAG 1533
| |||||||||||||||||||||||||||||||||
Sbjct 1499 GTTCCTCTGTTGTCAAGATTTTGAACGTGGAGTAG 1533
> Ahg898505 jgi|Araly1|898505|Al_scaffold_0005_2471
Length=1533
Score = 1533 bits (830), Expect = 0.0
Identities = 1309/1543 (85%), Gaps = 22/1543 (1%)
Strand=Plus/Plus
Query 1 ATGGAGAAGTTACTTGCTGGACAAACAAACAATGGATCCCTCAAGTCAAAGACGAAGATC 60
||||||| |||||||| ||||||| ||| ||||||| | || |||||||||||||||||
Sbjct 1 ATGGAGATGTTACTTGGTGGACAAGCAACCAATGGAGCTCTTAAGTCAAAGACGAAGATA 60
Query 61 GTCTGTACTCTCGGACCGGCTTCGAGATCGGTTGAGATGGTTGAGAAGCTTCTCAAAGCC 120
|| |||||||| ||||||||||| |||||||| | |||| |||||||||||||||| ||
Sbjct 61 GTTTGTACTCTTGGACCGGCTTCAAGATCGGTGGTGATGATTGAGAAGCTTCTCAAGGCT 120
Query 121 GGTATGAACGTAGCCCGGTTCAACTTCTCCCATGGTTCTCACTCATACCATCAAGAAACT 180
||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 121 GGTATGAACGTAGCCAGGTTCAATTTCTCCCATGGTTCTCACTCTTACCATCAAGAAACT 180
Query 181 CTTGACAATCTCAGAACCGCCATGGAGAACACTTGTATTCCCTGTGCCGTCATGCTCGAC 240
|| || ||||||||||||||||||| |||||| | |||| ||| |||||||||||||||
Sbjct 181 CTCGATAATCTCAGAACCGCCATGGCCAACACTGGAATTCTCTGCGCCGTCATGCTCGAC 240
Query 241 ACCAAGGGTCCTGAGATCCGAACCGGGTTTCTCAAAGAAGGCAAACCGGTTGAGCTAATT 300
|| |||||||||||||| |||||||||||||||||||||||||||||| | ||||||
Sbjct 241 ACAAAGGGTCCTGAGATACGAACCGGGTTTCTCAAAGAAGGCAAACCGATACAGCTAAAC 300
Query 301 CAAGGTCAAGAGATTACAATCTCAACTGATTACACCATGGAAGGAGATTCAAACACAATC 360
|||||||||||||| || ||||||| ||||||||| || ||||||||||||||||| |||
Sbjct 301 CAAGGTCAAGAGATCACCATCTCAATTGATTACACAATAGAAGGAGATTCAAACACTATC 360
Query 361 TCAATGAGTTACAAGAAACTTGCTGAAGATCTCAAGTCC-GGTGACGTGATTCTCTGTTC 419
|| ||||| |||||||||||||| || || ||||| || || || |||||||| |||||
Sbjct 361 TCCATGAGCTACAAGAAACTTGCAGAGGACCTCAAA-CCTGGCGATGTGATTCTTTGTTC 419
Query 420 CGACGGTACAATCTCTCTTACCGTCTTGTCTTGTGACAAGAATCTCGGTCTTGTTCGT-G 478
||||| |||||||| || || |||||||| ||||||||| ||||||||||||||||| |
Sbjct 420 AGACGGCACAATCTCACTAACTGTCTTGTCCTGTGACAAGTATCTCGGTCTTGTTCGTTG 479
Query 479 CCCGTTGCGAGAACTCTGCAGTTCTTGGAGAAAGAAAGAACGTGAACCTCCCTGGAATCG 538
|| ||||||||||||||||| |||||||||||||||||||||| || || |||||||| |
Sbjct 480 CC-GTTGCGAGAACTCTGCAATTCTTGGAGAAAGAAAGAACGTTAATCTTCCTGGAATTG 538
Query 539 TAGTTGATCTTCCAACACTCACAGAGAAGGATCAAGAGGATATTCTCCAATGGGGAGTTC 598
|||||||||| |||||||| || ||||| ||| |||| |||||| | |||||||||||||
Sbjct 539 TAGTTGATCTCCCAACACTTACCGAGAAAGATAAAGAAGATATTATGCAATGGGGAGTTC 598
Query 599 CGAATAAGATCGATATCATCGCTCTTTCCTTTGTTCGTAAAGGATCTGATCTGGTCGAGG 658
|||| || ||||| || ||||||||||| |||||||||||||||||||| || |||| |
Sbjct 599 CGAACAAAATCGACATAATCGCTCTTTCTTTTGTTCGTAAAGGATCTGACCTAATCGAAG 658
Query 659 TCAGGAAGTTGCTTGGAGAGAACGCAAAGAGTATCATGCTCATGTCAAAGGTGGAGAATC 718
| |||||||| ||||||||| || |||||| |||||||| |||||||||||||||||||
Sbjct 659 TTAGGAAGTTACTTGGAGAGCACTCAAAGAACATCATGCTTATGTCAAAGGTGGAGAATC 718
Query 719 AAGAAGGAGTGATGAATTTTGACAAGATTCTGGA-ATATTCTGATGCATTCATGGTGGCT 777
||||||| |||||||||||||| ||||||||||| | |||||||||| ||||||||||||
Sbjct 719 AAGAAGGGGTGATGAATTTTGATAAGATTCTGGAGA-ATTCTGATGCTTTCATGGTGGCT 777
Query 778 AGAGGTGAT-TTAGGAATGGAGATTCCGATTGAAAAGATGTTTCTTGCTCAGAAGATGAT 836
||||| ||| || ||| |||||||||| || ||||||||||||||||||||||| | ||
Sbjct 778 AGAGGAGATCTTGGGA-TGGAGATTCCAATCGAAAAGATGTTTCTTGCTCAGAAAACAAT 836
Query 837 GATTCA-GAAGGCTAATGCTCTTGGGAAGCCAATCGTCACAGCCACACAGATGCTTGAGT 895
||| || || |||||||||||||||||| ||| | || ||||| |||||||||||||| |
Sbjct 837 GAT-CAAGATGGCTAATGCTCTTGGGAAACCAGTTGTAACAGCTACACAGATGCTTGAAT 895
Query 896 CAATGACCAA-ATCTCCTCGTCCAACTAGAGCAGAAGCCACCGATGTAGCTAACGCTGTC 954
| ||||| | |||||||||||| |||||||| ||||| ||||| || || ||||| ||
Sbjct 896 CCATGAC-AGTATCTCCTCGTCCGACTAGAGCTGAAGCTACCGACGTTGCAAACGCGGTT 954
Query 955 CTTGACGGCACTGATTGCGTCATGCTCAGTGGAGAAACCGCCGCCGGAGCTCACCCTGAA 1014
||||| ||||| |||||||| ||||| |||||||||||||| || ||||||||||||||
Sbjct 955 CTTGATGGCACAGATTGCGTTATGCTTAGTGGAGAAACCGCTGCTGGAGCTCACCCTGAG 1014
Query 1015 ACCGCCGTGCTAACAATGTCAAGAATCTGTAAGGAAGCAGAGGATTTCATCGATTACGAC 1074
|| |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||
Sbjct 1015 ACAGCCGTGCTAACAATGTCAAGGATCTGTAAAGAAGCAGAGAATTTCATCGATTACGAC 1074
Query 1075 ACAATGCACAAGAAGATTCAAG-ATATCGTTTCGTTGCCTTTATCTCCTATTGAGAGCTT 1133
| | |||||||| | | || | ||||| ||| | || ||||| || || ||||||||
Sbjct 1075 ATTCTCCACAAGAAAACCCTAGGA-ATCGTCTCGGTACCGTTATCCCCAATCGAGAGCTT 1133
Query 1134 GGCCGCTTCAGCCGTTTCGACGGCGAGGAGTCTTTGTGCGGCTGCGATTGTCGTTCTAAC 1193
|| |||||||| ||||| || ||| ||||| ||| |||| | ||||| ||||| || ||
Sbjct 1134 AGCTGCTTCAGCTGTTTCTACCGCGCGGAGTGTTTTTGCGACAGCGATCGTCGTCCTCAC 1193
Query 1194 CAAGGGAGGTTACACGGTGGAGCTTGTGGCCAAGTACAGGCCTAGTGTTCCGATTCTGTC 1253
|| || || ||||| | ||||||||||| || ||| | || || ||||| ||| ||||
Sbjct 1194 TAAAGGCGGATACACCGCAGAGCTTGTGGCTAAATACCGTCCCAGCGTTCCAATTTTGTC 1253
Query 1254 CGTAATTGTGCCGGAGATTACTCGTACGGA-TGAT-TTCGAGTGGTCGTGCTCTGAATCT 1311
|| ||||||||||||||| ||| | ||| |||| || || | ||||||||| || ||
Sbjct 1254 AGTGATTGTGCCGGAGATTGCTCA-AGGGAATGATATT-GAATTGTCGTGCTCAGACTCG 1311
Query 1312 GCGGCTCATGTGGCAAGACGTGGTTTGATCTACCGTGGAATTGTTCCTGTGATGGCGACG 1371
| ||||||||| || |||||||||||||| |||||||| ||| |||| ||| ||||||||
Sbjct 1312 GTGGCTCATGTAGCGAGACGTGGTTTGATTTACCGTGGGATTATTCCGGTGGTGGCGACG 1371
Query 1372 GGAGCATCCGCTAGGTCTTCGAACAAGGACT-CGACGGAGGAGACGATTCA-ATTCGCCA 1429
||| | || |||||| || ||||| || | | |||||||||| |||| | |||||| |
Sbjct 1372 GGATCTTCGGCTAGGGATTTAAACAAAGA-TGCAACGGAGGAGATGATT-AGATTCGCTA 1429
Query 1430 TTGAATTCGCGAAGAAGAAGGGAATATGTAAGACAGGAGACTCGATTGTGGCGTTGCACA 1489
| | ||| || |||| ||||||||| |||||||| ||||| || |||||||| |||||||
Sbjct 1430 TCGGATTTGCAAAGACGAAGGGAATTTGTAAGACTGGAGATTCCATTGTGGCTTTGCACA 1489
Query 1490 AGATCGATGGCTCCTCTGTTGTCAAGATTTTGAACGTGGAGTA 1532
|||| ||||| ||||||||||| ||||| ||| ||| |||||
Sbjct 1490 AGATTGATGGTTCCTCTGTTGTGAAGATAGTGACCGTCGAGTA 1532
> Ahg898522 jgi|Araly1|898522|Al_scaffold_0005_2488
Length=1533
Score = 1522 bits (824), Expect = 0.0
Identities = 1310/1546 (85%), Gaps = 28/1546 (2%)
Strand=Plus/Plus
Query 1 ATGGAGAAGTTACTTGCTGGACAAACAAACAATGGATC-CCTCAAG-TCAAAGACGAAGA 58
||||||| |||||||| ||||||| ||| ||||||| | | || | |||||||||||||
Sbjct 1 ATGGAGATGTTACTTGGTGGACAAGCAACCAATGGAGCTCTTC--GTTCAAAGACGAAGA 58
Query 59 TCGTCTGTACTCTCGGACCGGCTTCGAGATCGGTTGAGATGGTTGAGAAGCTTCTCAAAG 118
| || |||||||| ||||||||||| |||||||| | |||| |||||||||||||||| |
Sbjct 59 TTGTTTGTACTCTTGGACCGGCTTCAAGATCGGTGGTGATGATTGAGAAGCTTCTCAAGG 118
Query 119 CCGGTATGAACGTAGCCCGGTTCAACTTCTCCCATGGTTCTCACTCATACCATCAAGAAA 178
| ||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||
Sbjct 119 CTGGTATGAACGTAGCCAGGTTCAATTTCTCCCATGGTTCTCACTCTTACCATCAAGAAA 178
Query 179 CTCTTGACAATCTCAGAACCGCCATGGAGAACACTTGTATTCCCTGTGCCGTCATGCTCG 238
|||| || ||||||||||||||||||| |||||| | |||| ||| |||||||||||||
Sbjct 179 CTCTCGATAATCTCAGAACCGCCATGGCCAACACTGGAATTCTCTGCGCCGTCATGCTCG 238
Query 239 ACACCAAGGGTCCTGAGATCCGAACCGGGTTTCTCAAAGAAGGCAAACCGGTTGAGCTAA 298
|||| |||||||||||||| |||||||||||||||||||||||||||||| | ||||||
Sbjct 239 ACACAAAGGGTCCTGAGATACGAACCGGGTTTCTCAAAGAAGGCAAACCGATACAGCTAA 298
Query 299 TTCAAGGTCAAGAGATTACAATCTCAACTGATTACACCATGGAAGGAGATTCAAACACAA 358
|||||||||||||| || ||||||| ||||||||| || ||||||||||||||||| |
Sbjct 299 ACCAAGGTCAAGAGATCACCATCTCAATTGATTACACAATAGAAGGAGATTCAAACACTA 358
Query 359 TCTCAATGAGTTACAAGAAACTTGCTGAAGATCTCAAGTCC-GGTGACGTGATTCTCTGT 417
|||| ||||| |||||||||||||| || || ||||| || || || |||||||| |||
Sbjct 359 TCTCCATGAGCTACAAGAAACTTGCAGAGGACCTCAAA-CCTGGCGATGTGATTCTTTGT 417
Query 418 TCCGACGGTACAATCTCTCTTACCGTCTTGTCTTGTGACAAGAATCTCGGTCTTGTTCGT 477
|| ||||| |||||||| || || |||||||| ||||||||| |||||||||||||||||
Sbjct 418 TCAGACGGCACAATCTCACTAACTGTCTTGTCCTGTGACAAGTATCTCGGTCTTGTTCGT 477
Query 478 -GCCCGTTGCGAGAACTCTGCAGTTCTTGGAGAAAGAAAGAACGTGAACCTCCCTGGAAT 536
||| ||||||||||||||||| |||||||||||||||||||||| || || ||||||||
Sbjct 478 TGCC-GTTGCGAGAACTCTGCAATTCTTGGAGAAAGAAAGAACGTTAATCTTCCTGGAAT 536
Query 537 CGTAGTTGATCTTCCAACACTCACAGAGAAGGATCAAGAGGATATTCTCCAATGGGGAGT 596
||||||||||| |||||||| || ||||| ||| |||| |||||| | |||||||||||
Sbjct 537 TGTAGTTGATCTCCCAACACTTACCGAGAAAGATAAAGAAGATATTATGCAATGGGGAGT 596
Query 597 TCCGAATAAGATCGATATCATCGCTCTTTCCTTTGTTCGTAAAGGATCTGATCTGGTCGA 656
|||||| || ||||| || ||||||||||| |||||||||||||||||||| || ||||
Sbjct 597 TCCGAACAAAATCGACATAATCGCTCTTTCTTTTGTTCGTAAAGGATCTGACCTAATCGA 656
Query 657 GGTCAGGAAGTTGCTTGGAGAGAACGCAAAGAGTATCATGCTCATGTCAAAGGTGGAGAA 716
|| |||||||| ||||||||| || |||||| |||||||| |||||||||||||||||
Sbjct 657 AGTTAGGAAGTTACTTGGAGAGCACTCAAAGAACATCATGCTTATGTCAAAGGTGGAGAA 716
Query 717 TCAAGAAGGAGTGATGAATTTTGACAAGATTCTGGA-ATATTCTGATGCATTCATGGTGG 775
||||||||| |||||||||||||| ||||||||||| | |||||||||| ||||||||||
Sbjct 717 TCAAGAAGGGGTGATGAATTTTGATAAGATTCTGGAGA-ATTCTGATGCTTTCATGGTGG 775
Query 776 CTAGAGGTGAT-TTAGGAATGGAGATTCCGATTGAAAAGATGTTTCTTGCTCAGAAGATG 834
||||||| ||| || ||| |||||||||| || ||||||||||||||||||||||| |
Sbjct 776 CTAGAGGAGATCTTGGGA-TGGAGATTCCAATCGAAAAGATGTTTCTTGCTCAGAAAACA 834
Query 835 ATGATTCA-GAAGGCTAATGCTCTTGGGAAGCCAATCGTCACAGCCACACAGATGCTTGA 893
||||| || || |||||||||||||||||| ||| | |||||||| ||||||||||||||
Sbjct 835 ATGAT-CAAGATGGCTAATGCTCTTGGGAAACCAGTTGTCACAGCTACACAGATGCTTGA 893
Query 894 GTCAATGACCAA-ATCTCCTCGTCCAACTAGAGCAGAAGCCACCGATGTAGCTAACGCTG 952
|| ||||| | |||||||||||| |||||||| ||||| || || || || ||||| |
Sbjct 894 ATCCATGAC-AGTATCTCCTCGTCCGACTAGAGCTGAAGCAACTGACGTTGCAAACGCAG 952
Query 953 TCCTTGACGGCACTGATTGCGTCATGCTCAGTGGAGAAACCGCCGCCGGAGCTCACCCTG 1012
| |||||||| |||||||| || ||||| || ||||||||||| || |||||||||||||
Sbjct 953 TTCTTGACGGGACTGATTGTGTTATGCTTAGCGGAGAAACCGCTGCTGGAGCTCACCCTG 1012
Query 1013 AAACCGCCGTGCTAACAATGTCAAGAATCTGTAAGGAAGCAGAGGATTTCATCGATTACG 1072
| || |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||
Sbjct 1013 AGACAGCCGTGCTAACAATGTCAAGGATCTGTAAAGAAGCAGAGAATTTCATCGATTACG 1072
Query 1073 ACACAATGCACAAGAAGATTCAAG-ATATCGTTTCGTTGCCTTTATCTCCTATTGAGAGC 1131
|| | |||||||| | | || | || ||||| || || ||||| || || ||||||
Sbjct 1073 ACGTTCTCCACAAGAATACCCGAGGA-ATGGTTTCATTACCGTTATCCCCGATCGAGAGC 1131
Query 1132 TTGGCCGCTTCAGCCGTTTCGACGGCGA-GGAGTCTTTGTGCGGCTGCGATTGTCGTTCT 1190
|| || |||||||| ||||| || || | ||||| ||| |||| | ||||| ||||| ||
Sbjct 1132 TTAGCTGCTTCAGCTGTTTCTACCGC-ACGGAGTGTTTTTGCGACAGCGATCGTCGTCCT 1190
Query 1191 AACCAAGGGAGGTTACACGGTGGAGCTTGTGGCCAAGTACAGGCCTAGTGTTCCGATTCT 1250
|| ||||| || ||||| | ||||||||||| || ||| | || || ||||| ||| |
Sbjct 1191 CACTAAGGGCGGATACACCGCAGAGCTTGTGGCTAAATACCGTCCCAGCGTTCCAATTTT 1250
Query 1251 GTCCGTAATTGTGCCGGAGATTACTCGTACGGA-TGAT-TTCGAGTGGTCGTGCTCTGAA 1308
||| || ||||||||||||||| ||| | ||| |||| || |||| ||||||||| ||
Sbjct 1251 GTCAGTGATTGTGCCGGAGATTGCTCA-AGGGAATGATATT-GAGTTGTCGTGCTCAGAC 1308
Query 1309 TCTGCGGCTCATGTGGCAAGACGTGGTTTGATCTACCGTGGAATTGTTCCTGTGATGGCG 1368
|| | |||||||||||| |||||| ||||||| |||||||| ||| |||| ||| |||||
Sbjct 1309 TCGGTGGCTCATGTGGCGAGACGTAGTTTGATTTACCGTGGGATTATTCCGGTGGTGGCG 1368
Query 1369 ACGGGAGCATCCGCTAG-GTCTTCGAACAAGGACTCGACGGAGGAGACGATTCA-ATTCG 1426
|||||| | || ||||| | ||| ||||| || | |||||||||| |||| | |||||
Sbjct 1369 ACGGGATCTTCAGCTAGAGA-TTCAAACAACGAAGCAACGGAGGAGATGATT-AGATTCG 1426
Query 1427 CCATTGAATTCGCGAAGAAGAAGGGAATATGTAAGACAGGAGACTCGATTGTGGCGTTGC 1486
| || | ||||||||||| ||||||||| |||||||| ||||| || |||||||| ||||
Sbjct 1427 CTATCGGATTCGCGAAGATGAAGGGAATTTGTAAGACTGGAGATTCCATTGTGGCTTTGC 1486
Query 1487 ACAAGATCGATGGCTCCTCTGTTGTCAAGATTTTGAACGTGGAGTA 1532
||||||| ||||| ||||||||||| ||||| ||| ||| |||||
Sbjct 1487 ACAAGATTGATGGTTCCTCTGTTGTGAAGATAGTGACCGTCGAGTA 1532
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57401999215
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5