BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G05790.1
Length=2829
Score E
Sequences producing significant alignments: (Bits) Value
Ahg477873 jgi|Araly1|477873|fgenesh2_kg.3__574__AT3G05790.1 4416 0.0
Ahg903431 jgi|Araly1|903431|Al_scaffold_0003_559 2030 0.0
Ahg489519 jgi|Araly1|489519|fgenesh2_kg.6__2653__AT5G26860.1 1652 0.0
Ahg887430 jgi|Araly1|887430|Al_scaffold_0845_1 1122 0.0
Ahg887843 jgi|Araly1|887843|Al_scaffold_0881_1 715 0.0
Ahg359743 jgi|Araly1|359743|fgenesh1_pg.C_scaffold_845000001 340 3e-92
Ahg903430 jgi|Araly1|903430|Al_scaffold_0003_558 291 3e-77
Ahg918995 jgi|Araly1|918995|scaffold_100276.1 148 2e-34
Ahg351631 jgi|Araly1|351631|fgenesh1_pg.C_scaffold_6002224 148 2e-34
> Ahg477873 jgi|Araly1|477873|fgenesh2_kg.3__574__AT3G05790.1
Length=2823
Score = 4416 bits (2391), Expect = 0.0
Identities = 2697/2842 (95%), Gaps = 32/2842 (1%)
Strand=Plus/Plus
Query 1 ATGCTGAAGTTTCTCACTCCGACTGCTTACGCTTCCCATCACGTGACTCCGGCTACTCGA 60
||||||||| |||||||||||| | |||||||||||||||||||||||||| ||||
Sbjct 1 ATGCTGAAGCTTCTCACTCCGA---C---CGCTTCCCATCACGTGACTCCGGCTATTCGA 54
Query 61 TTCCGGTCTACCCCGGTTAAGAATCTATTGTTCAAGCAACTGACTCTTCTAACCGGATGG 120
|||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||
Sbjct 55 TTCCGGTCTACCCCGGTTAAGAGTCTATTGTTTAAGCAACTGACTCTGCTAACCGGATGG 114
Query 121 AACCGGAGTTCCTACGAATTGGGTCGTCGTTCTTTTTCCTCCGACTTGGATTCCGACAC- 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 115 AACCGGAGTTCCTACGAATTGGGTCGTCGTTCTTTTTCCTCCGAGTTGGATTCCGACGCG 174
Query 180 AAAGT-CT--TCAACTACTACTGTCTCAGCTAAACCTCACCTGGACGATTGTCTAACGGT 236
||| | || |||| || ||||||||| ||||||||||||| |||||||||||||||||
Sbjct 175 AAA-TCCTCAGCAACGACGACTGTCTCAACTAAACCTCACCTCGACGATTGTCTAACGGT 233
Query 237 TATAGCATTGCCATTGCCCCACAAGCCTCTTATTCCTGGCTTTTACATGCCAATATATGT 296
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 234 TATAGCATTGCCATTGCCTCACAAGCCTCTTATTCCTGGCTTTTACATGCCAATCTATGT 293
Query 297 CAAGGATCCTAAAGTTCTTGCAGCTTTACAAGAGAGTAGAAGACAACAAGCTCCATATGC 356
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 294 CAAGGATCCTAAAGTTCTTGCAGCTTTACAAGAGAGCAGAAGACAACAAGCTTTATATGC 353
Query 357 AGGGGCTTTCCTTTTGAAGGATGACGCGTCATCTGACTCATCTTCGAGCTCTGAAACTGA 416
|||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 354 GGGGGCTTTCCTTTTCAAGGATGACGCGTCAACTGACTCATCTTCTAGCTCTGAAACTGA 413
Query 417 GAATATTCTAGAGAAGTTGAAAGGAAAAGAGTTGATTAACCGGATTCATGAAGTTGGCAC 476
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 414 GAATATTCTAGAGAAGTTGAAAGGAAAAGAGTTGCTTTACCGGATTCATGAAGTTGGCAC 473
Query 477 ACTTGCCCAGATTTCAAGTATCCAAGGTGAGCAAGTCATCCTTATTGGTCACAGACAACT 536
|||||| |||||||||||||||||||||||||||||||||| ||||| | ||||| |||
Sbjct 474 ACTTGCTAAGATTTCAAGTATCCAAGGTGAGCAAGTCATCCTCATTGGCCGCAGACGACT 533
Query 537 TCGAATAACAGAGATGGTGAGTGAGAGTGAAGATCCCCTAACCGTCAAAGTTGACCATCT 596
|||||||||||||| || || |||||||||||| |||||||| ||||||||||||||
Sbjct 534 TCGAATAACAGAGA---TG-GT--GAGTGAAGATCCTCTAACCGTAAAAGTTGACCATCT 587
Query 597 AAAGGATAAGCCATATGACAAGGACGATGATGTCATCAAGGCAACATACTTTCAAGTGAT 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 588 AAAGGATAAGCCATATGACAAGGACGATGATGTCATCAAGGCAACATACTTTCAAGTTAT 647
Query 657 GTCGACACTTAGGGATGTCTTAAAGACAACTTCACTCTGGAGAGATCATGTTCGGACATA 716
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 648 GTCGACACTTAGGGATGTTTTAAAGACAACTTCACTCTGGAGAGATCAAGTTCGGACATA 707
Query 717 TACCCAGGCATGTTCTCTTCATATTTGGCACTGCTTGAGACATATAGGTGAATTCAATTA 776
|||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||
Sbjct 708 TACCCAGGCATGTTCTCTTCATATCTGGCACAGCTTGCGACATATAGGTGAATTCAATTA 767
Query 777 TCCAAAGTTAGCCGATTTTGGAGCTGGGATCTCTGGCGCTAACAAACATCAAAATCAGGG 836
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 768 TCCAAGGTTAGCCGATTTTGGAGCCGGGATCTCTGGCGCTAACAAACATCAAAATCAGGG 827
Query 837 GGTTCTTGAAGAACTGGATGTTCACAAACGTCTAGAGTTGACGCTGGAATTGGTGAAAAA 896
||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 828 GGTTCTTAAAGAACTGGATGTTCATAAACGTCTGGAGTTGACGCTGGAATTGGTGAAAAA 887
Query 897 AGAAGTTGAAATTAACAAGATTCAAGAATCCATAGCAAAAGCTGTTGAAGAAAAATTTAG 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 AGAAGTTGAAATTAACAAGATTCAAGAATCCATAGCAAAAGCTGTTGAAGAAAAATTTAG 947
Query 957 TGGCGATAGACGTCGTATCATACTAAAGGAGCAGATCAATGCTATAAAAAAGGAGCTTGG 1016
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 948 TGGCGACAGACGTCGTATCATACTAAAGGAGCAGATCAATGCTATAAAAAAGGAGCTTGG 1007
Query 1017 CGGGGAGACAGACAGCAAATCTGCACTTTCTGAAAAGTTTAGGGGGAGGATTGACCCTAT 1076
|| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1008 CGTGGAGACAGACAACAAATCTGCACTTTCTGAAAAGTTTAGGGGGAGGGTTGACCCTAT 1067
Query 1077 TAAAGACAAGATTCCAGGACATGTACTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCA 1136
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1068 TAAAGACAAGATTCCAGAACATGTACTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCA 1127
Query 1137 GCTGTTAGAAACCAGTTCTAGCGAATTCGATGTGACTTGTAACTACCTTGATTGGTTGAC 1196
|||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||||
Sbjct 1128 GCTGTTAGAAACCAGTTCCAGCGAATACGATGTGACCTATAACTACCTTGATTGGTTGAC 1187
Query 1197 CGTGTTGCCTTGGGGAAATTTCAGTGATGAGAATTTTAATGTCCTACGGGCAGAAAAGAT 1256
|||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1188 CGTGCTGCCTTGGGGAAAATTCAGTGATGAGAATTTTGATGTCCTACGGGCAGAAAAGAT 1247
Query 1257 TCTTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATACTAGAGTTTATTGC 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1248 TCTTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATACTAGAGTTTATTGC 1307
Query 1317 TGTGGGAGGACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCAACTGG 1376
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1308 TGTGGGAAGACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCACCTGG 1367
Query 1377 AGTAGGTAAAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCG 1436
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1368 AGTAGGTAAAACTAGCATTGGGCGTTCCATTGCACGTGCTCTTGACCGCAAGTTCTTCCG 1427
Query 1437 GTTCTCTGTTGGAGGACTATCCGATGTTGCTGAGATTAAGGGGCATCGTCGAACGTATAT 1496
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1428 GTTCTCTGTTGGAGGACTATCCGATGTTGCTGAGATTAAGGGGCATCGTCGAACATATAT 1487
Query 1497 TGGTGCCATGCCTGGAAAGATGGTGCAGTGTCTAAAGAATGTGGGAACAGAAAATCCTCT 1556
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1488 TGGTGCCATGCCTGGAAAGATGGTGCAATGTCTAAAGAATGTGGGAACAGAAAATCCTCT 1547
Query 1557 TGTTCTGATCGATGAGATTGATAAGCTTGGAGTTAGGGGCCACCATGGCGACCCAGCCAG 1616
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1548 TGTTCTGATCGATGAGATTGATAAGCTTGGAGTTAGGTGCCACGATGGCGACCCAGCCAG 1607
Query 1617 TGCAATGTTGGAGCTTTTGGATCCAGAGCAGAATGCAAATTTTCTAGACCACTATCTCGA 1676
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |
Sbjct 1608 TGCAATGTTGGAGCTTTTGGATCCAGAGCAAAATGCAAACTTTCTAGACCACTATCTCAA 1667
Query 1677 TGTTCCTATTGACTTATCCAAGGTTTTATTTGTATGCACAGCAAACGTGACAGATACCAT 1736
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1668 TGTTACTATTGACTTATCCAAGGTTTTATTTGTATGCACAGCAAACGTGACAGATACCAT 1727
Query 1737 TCCGGGTCCTCTGCTAGACAGAATGGAGGTGATCACTCTCTCAGGGTACATTACTGATGA 1796
|||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1728 TCCGAGTCCCCTGCTAGACAGAATGGAGGTGATTACTCTCTCAGGGTACATTACTGATGA 1787
Query 1797 GAAAATGCATATCGCTAGAGACTATTTGGAGAAAACCGCACGCAGAGATTGTGGCATTAA 1856
|||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 1788 GAAAATGCATATTGCTAGAGACTATTTGGTGAAAACTGCACGCAGAGATTGTGGCATTAA 1847
Query 1857 GCCTGAACAGGTTGATGTGAGCGATGCAGCTTTTCTTTCCTTGATAGAACATTACTGCAG 1916
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1848 GCCTGAACAGGTTGATGTGAGCGATGCAGCTCTTCTTTCCTTGATAGAAAATTACTGCAG 1907
Query 1917 AGAAGCAGGAGTTAGAAATCTCCAGAAGCAGATTGAGAAGATTTTTCGTAAGATTGCTCT 1976
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 1908 AGAAGCAGGAGTTAGAAATCTCCAGAAGCAGATAGAGAAGGTTTTTCGTAAGATTGCTCT 1967
Query 1977 TAAACTTGTTCGCAAAGCGGCATC--CA-CCGAAGTGCCTAG-AATTTCTGATGATGTTA 2032
||||||||| ||||||| |||| | || ||||||||||| | |||||||||||||||||
Sbjct 1968 TAAACTTGTGCGCAAAGGGGCAGCATCAGCCGAAGTGCCT-GCAATTTCTGATGATGTTA 2026
Query 2033 CTACTGACACTGAAGAAACTAAATCTTTGGCCAAGACTGATTTGGAATCTCCAGAGACCT 2092
||||||||| || ||| ||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 2027 CTACTGACAATGGAGATACTAAATCTGTGGCCAAGACTGATTTGGAATCCCCAGAGACCT 2086
Query 2093 CTGCAGAAGGATCCACTGTGTTGACAGATGAGTTGGCAACTGGGGATC-CAACAGAATCA 2151
||||||| |||||||| |||||||||||||||||||||||||| || | ||| |||||||
Sbjct 2087 CTGCAGACGGATCCACCGTGTTGACAGATGAGTTGGCAACTGGTGA-CACAAAAGAATCA 2145
Query 2152 ACGACTGAGCAGAGCGGAGAGGTAGCTGAAACGGT---TGAAAAGTATATGATTGATGAA 2208
| |||||||||||||||||| | ||| || | ||| |||||||| |||||||||||||
Sbjct 2146 AAGACTGAGCAGAGCGGAGA-G-AGCGGAGA-GGTAGCTGAAAAGTTTATGATTGATGAA 2202
Query 2209 TCAAACCTTTCAGATTATGTAGGCAAGCCAGTATTCCAGGAAGAGAAGATATATGAGCAG 2268
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||
Sbjct 2203 TCAAACCTTTCAGATTATATAGGCAAGCCAGTATTCCAGGCAGAGAAGATATATGAACAG 2262
Query 2269 ACACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACATCCATGGGGGGCTCAACATTGTAC 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2263 ACACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACATCCATGGGGGGCTCAACATTGTAC 2322
Query 2329 ATAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAAGGTGGTCTTCATATAACGGGTCGG 2388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2323 ATAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAAGGTGGTCTTCATATAACGGGTCGG 2382
Query 2389 CTTGGGGATGTGATGAAAGAAAGCGCAGAGATAGCTCACACAGTCGCGAGAAGAATAATG 2448
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 2383 CTTGGGGATGTGATGAAAGAAAGCGCAGAGATTGCTCACACAGTCGCCAGAAGAATAATG 2442
Query 2449 CTGGAGAAAGAACCCGAGAACAAGTTGTTTGCGAATTCCAAGCTTCATCTACATGTACCT 2508
||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 2443 CTGGAGAAAAAACCGGAGAACAAGTTCTTTGCGAATTCCAAGCTTCATTTACATGTACCT 2502
Query 2509 GCAGGAGCCACACCAAAAGACGGCCCAAGCGCAGGCTGCACCATGATAACTTCATTGCTA 2568
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2503 GCAGGAGCCACTCCAAAAGACGGTCCAAGCGCAGGCTGCACCATGATAACTTCATTGCTA 2562
Query 2569 TCACTTGCCTTGAAGAAGCCTGTAAGGAAGGATCTTGCAATGACTGGAGAAGTCACTTTG 2628
|||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 2563 TCACTTGCCTCGAAGAAGCCAGTAAGGAAGGATCTTGCAATGACCGGAGAAGTCACTTTG 2622
Query 2629 ACCGGTAGAATCCTTGCGATTGGCGGCGTGAAAGAGAAGACTATAGCTGCAAGACGGAGT 2688
|| |||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||
Sbjct 2623 ACGGGTAGAATTCTTGCAATTGGCGGCGTGAAAGAGAAGACAATAGCTGCAAAACGGAGT 2682
Query 2689 CAAGTGAAGGTGATAATATTCCCTGAGGCTAACCGGAGAGATTTTGATGAGCTGGCGAGA 2748
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||
Sbjct 2683 CAAGTGAAGGTGATAATATTCCCGGAGGCTAACCGGCGAGATTTTGATGAGCTGGCG-GA 2741
Query 2749 AA-CGTGAAAGAAGGGCTCGAAGTTCATTTCGTGGATGAATATGAGCAGATTTTCGAGCT 2807
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2742 AAACGTGAAAGAAGGGCTCGAAGTTCATTTCGTGAATGAATATGAGCAGATTTTCGAGCT 2801
Query 2808 AGCCTTTGGCTATGACCATTAG 2829
||||||||||||||||||||||
Sbjct 2802 AGCCTTTGGCTATGACCATTAG 2823
> Ahg903431 jgi|Araly1|903431|Al_scaffold_0003_559
Length=2772
Score = 2030 bits (1099), Expect = 0.0
Identities = 1590/1822 (87%), Gaps = 53/1822 (3%)
Strand=Plus/Plus
Query 1021 GAGACAGACAG-CAAATCTGCACTTTCTGAAAAGTTTAGGGGGAGGATTGACCCTATTAA 1079
||||||||| | | |||| ||||||||| |||| | |||| |||||||| ||| ||
Sbjct 991 GAGACAGAC-GACGGATCTTCACTTTCTGCAAAGATAAGGGTAAGGATTGATACTAATAG 1049
Query 1080 AGACAAGATTCCAGGACATGTACTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCAGCT 1139
||| || |||||| ||||||| |||||||||| ||||||||| ||| ||| ||| || |
Sbjct 1050 AGAAAACATTCCAAAACATGTATTAAAAGTCATGGAAGAAGAGTTTACAAAGCTGGAGAT 1109
Query 1140 GTTAGAA-ACCAGTTCTAGCGAATTCGATGTGACTTGTAACTACCTTGATTGGTTGACCG 1198
||||||| | || || |||||| |||||| |||| | |||||||||||||||||||||||
Sbjct 1110 GTTAGAAGA-CAATTATAGCGACTTCGATTTGACCTATAACTACCTTGATTGGTTGACCG 1168
Query 1199 TGTTGCCTTGGGGAAATTTCAGTGATGAGAATTTTAATGTCCTACGGGCAGAAAAGATTC 1258
|| |||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 1169 TGCTGCCTTGGGGAAATTTCAGTTATGAGAATTTTGATGTCCTACGGGCAAAAAAGATTC 1228
Query 1259 TTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATACTAGAGTTTATTGCTG 1318
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1229 TTGACGAGGATCATTACGGATTATCTGATGTAAAAGAAAGAATATTAGAGTTTATTGCTG 1288
Query 1319 TGGGAGGACTTAGAGGCACTTCACAAGGGAAGATCATTTGTCTCTCTGGCCCAACTGGAG 1378
||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct 1289 TGGGAAGACTTAGAGGCACTTCACAAGGGAAAATCATTTGTCTATCTGGCCCACCTGGAG 1348
Query 1379 TAGGTAAAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGT 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1349 TAGGTAAAACTAGCATTGGGCGTTCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGT 1408
Query 1439 TCTCTGTTGGAGGACTATCCGATGTTG-CTGAGATTAAGGGGCATCGTCGAACGTATATT 1497
|| |||||||||||||||| ||||||| | ||||||||||||||| ||| ||| ||| ||
Sbjct 1409 TCGCTGTTGGAGGACTATCTGATGTTGGC-GAGATTAAGGGGCATTGTCAAACATATGTT 1467
Query 1498 GGTGCCATGCCTGGAAAGATGGTGCAGTGTCTAAAGAATGTGGGAACAGAAAATCCTCTT 1557
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 1468 GGTGCCATGCCTGGAAAGATGGTGCAATGTCTAAAGAGTGTGGGAACAGAAAATCCTCTT 1527
Query 1558 GTTCTGATCGATGAGATTGATAAGCTTGGAGTTAGGGGCCAC-CATGGCGACCCAGCCAG 1616
||||||||||||||||||||||||||| | | ||| ||||| | |||||||||||||||
Sbjct 1528 ATTCTGATCGATGAGATTGATAAGCTTG-A-T-AGGTGCCACAC-TGGCGACCCAGCCAG 1583
Query 1617 TGCAATGTTGGAGCTTTTGGATCCAGAGCAGAATGCAAATTTTCTAGACCACTATCTCGA 1676
||| |||||||| || |||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1584 TGCGTTGTTGGAGGTTATGGATCCAGAGCAGAATGCAAATTTTCTAGACCACTTTCTCAA 1643
Query 1677 TGTTCCTATTGACTTATCCAAGGTTTTATTTGTATGCACAGCAAACGTGACAGATACCAT 1736
|||| ||||||||||||| |||||||||||||||||||| ||||| |||| ||| | ||
Sbjct 1644 TGTTACTATTGACTTATCAAAGGTTTTATTTGTATGCACTGCAAATGTGATAGAAATGAT 1703
Query 1737 TCCGGGTCCTCTGCTAGACAGAATGGAGGTGATC-ACTCTCTCAGGGTACATTACTGATG 1795
||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||
Sbjct 1704 TCCGGGTCCTCTGCTAGACAGAATGGAGGTGATTGA-TCTCTCTGGGTATGTTACTGATG 1762
Query 1796 AGAAAATGCATATCGCTAGAGACTATTTGGAGAAAACCG-CACGCAGAGATTGTGGCATT 1854
||||||||||||| |||||||||||||||| ||||| | || |||||||||||||||||
Sbjct 1763 AGAAAATGCATATTGCTAGAGACTATTTGGTGAAAAA-GACATGCAGAGATTGTGGCATT 1821
Query 1855 AAGCCTGAACAGGTTGATGTGAGCGATGCAGCTTTTCTTTCCTTGATAGAACATTACTGC 1914
|||||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||
Sbjct 1822 AAGCCTGAACAGGTTGATTTGAGTGATGCAGCTCTTCTTTCCTTGATAGAAAATTACTGC 1881
Query 1915 AGAGAAGCAGGAGTTAGAAATCTCCAGAAGCAGATTGAGAAGATTTTTCGTAAGATTGCT 1974
|||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||
Sbjct 1882 AGAGAAGCAGGAGTTAGAAATCTCCAAAAGCAGATTGAGAAGATTTACCGTAAGGTTGCT 1941
Query 1975 CTTAAACTTGTTCGCAAAGCGGCATCCACCGAAGTGCCTAGAATTTCTGATGATGTTACT 2034
||| |||| || ||| ||| | | | | | | | | ||| | ||| | | |||
Sbjct 1942 CTTGAACTAGTACGCCAAG-G--AGC-A--GTT-T-C-T----TTT-T-ATG-T-T-ACT 1983
Query 2035 ACTGACACTGAAGAAACTAAATCTTTGGCCAAGACTGATTTGGAA-TCTCCAGAGACCTC 2093
|||||| |||| |||||||||| ||||||||| |||| ||| | | || || |
Sbjct 1984 ---GACACTAAAGATACTAAATCTTCGGCCAAGACCGATTCGGAGGT-TA-AGGGAA-T- 2036
Query 2094 TGCA-GAAG--GATCCACTGTGTTGACAGATGAGTTGGCAACTGGGGATCCAACAGAATC 2150
| | | | ||| | | || || | ||| | |||||||||||| ||||||||||
Sbjct 2037 -GAAAGTGGCTGAT--ATTATGAAGATACTTGAATCAGCAACTGGGGATTCAACAGAATC 2093
Query 2151 AACGACTGAGCAGAGCGGAGAGGTAGCTGAAACGGTTGAAAAG-TATATGATTGATGAAT 2209
|| |||| |||||||||||| ||||||| ||||| || ||||| | ||||||||||||||
Sbjct 2094 AAAGACTAAGCAGAGCGGAGTGGTAGCTAAAACGTTTAAAAAGGT-TATGATTGATGAAT 2152
Query 2210 CAAACCTTTCAGATTATGTAGGCAAGCCAGTATTCCAGGAAGAGAAGATATATGAGCAGA 2269
|||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct 2153 CAAACCTTGCAGATTATGTAGGCAAACCAGTATTCCAGGAAGAGAAGATCTATGAACAGA 2212
Query 2270 CACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACATCCATGGGGGGCTCAACATTGTACA 2329
|||| || |||||||| |||||||||||||||||||||||||| |||||||| |||||||
Sbjct 2213 CACCTGTTGGGGTTGTGATGGGTCTAGCTTGGACATCCATGGGTGGCTCAACGTTGTACA 2272
Query 2330 TAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAAGGTGGTCTTCATATAACGGGTCGGC 2389
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||
Sbjct 2273 TAGAGACAACCTTTGTAGAAGAAGGAGAGGGAAAAGGTGGTCTTCATATAACGGGTCAGC 2332
Query 2390 TTGGGGATGTGATGAAAGAAAGCGCAGAGATAGCTCACACAGTCGCGAGAAGAATAATGC 2449
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 2333 TTGGGGATGTGATGAAAGAAAGCGCAGAGATCGCTCACACAGTCGCTAGAAGAATAATGT 2392
Query 2450 TGGAGAAAGAACCCGAGAACAAGTTGTTTGCGAATTCCAAGCTTCATCTACATGTACCTG 2509
| ||||||||||| |||||| || ||||||||||||||||||||| ||||||| ||||
Sbjct 2393 TTGAGAAAGAACCAGAGAACCTCTTTTTTGCGAATTCCAAGCTTCATTTACATGTTCCTG 2452
Query 2510 CAGGAGCCACACCAAAAGACGGCCCAAGCGCAGGCTGCACCATGATAACTTCATTGCTAT 2569
||||||||||||||||||||| ||||| ||||||||||||||||| ||||| || ||||
Sbjct 2453 AAGGAGCCACACCAAAAGACGGTCCAAGTGCAGGCTGCACCATGATCACTTCGTTCCTAT 2512
Query 2570 CACTTGCCTTGAAGAAGCCTGTAAGGAAGGATCTTGCAATGACTGGAGAAGTCACTTTGA 2629
|||||||| ||||||||| |||||||||||||||||||||||| |||||||||||| | |
Sbjct 2513 CACTTGCCATGAAGAAGCTTGTAAGGAAGGATCTTGCAATGACCGGAGAAGTCACTCTAA 2572
Query 2630 CCGGTAGAATCCTTGCGATTGGCGGCGTGAAAGAGAAGACTATAGCTGCAAGACGGAGTC 2689
| |||||||| ||| | ||||| ||||| || ||||||||||||||||||| ||||||||
Sbjct 2573 CTGGTAGAATTCTTCCAATTGGTGGCGTTAAGGAGAAGACTATAGCTGCAAAACGGAGTC 2632
Query 2690 A-AGTGAAGGTGATAATATTCCCTGAGGCTAACCGGAGAGATTTTGATGAGCTGGCGAGA 2748
| | | || ||||||||||| ||||| || |||||||| ||||| ||||| ||| ||
Sbjct 2633 AGA-TCAAAACAATAATATTCCCGGAGGCAAATCGGAGAGACTTTGAGGAGCTTGCG-GA 2690
Query 2749 AA-CGTGAAAGAAGGGCTCGAAGTTCATTTCGTGGATGAATATGAGCAGATTTTCGAGCT 2807
|| | ||||||||||||| || ||||| |||||||||||||||||| |||| ||||| ||
Sbjct 2691 AAACATGAAAGAAGGGCTTGATGTTCACTTCGTGGATGAATATGAGAAGATATTCGATCT 2750
Query 2808 AGCCTTTGGCTATGACCATTAG 2829
||| || ||||||||||||
Sbjct 2751 AGCATTCAATTATGACCATTAG 2772
Score = 298 bits (161), Expect = 2e-79
Identities = 221/250 (88%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 198 TGTCTCAGCTAAACCTCA-CCTGGACGATTGTCTAACGGTTATAGCATTGCCATTGCCCC 256
||||||| |||| ||| | ||| ||||||||||||||||||||||||||||||||||| |
Sbjct 297 TGTCTCAACTAACCCT-ACCCTCGACGATTGTCTAACGGTTATAGCATTGCCATTGCCTC 355
Query 257 ACAAGCCTCTTATTCCTGGCTTTTACATGCCAATATATGTCAAGGATCCTAAAGTTCTTG 316
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 356 ACAAGCCTCTTATTCCTGGCTTTTACATGCCAATCTATGTCAAGGATCCTAAAGTTCTTG 415
Query 317 CAGCTTTACAAGAGAGTAGAAGACAACAAGCTCCATATGCAGGGGCTTTCCTTTTGAAGG 376
|||||||||||||||| | |||||||||| ||||||||| |||||||||||||||||||
Sbjct 416 CAGCTTTACAAGAGAGCACAAGACAACAATCTCCATATGTTGGGGCTTTCCTTTTGAAGG 475
Query 377 ATGACGCGTC-ATCTGACTCATCTTCGAGCTCTGAAACTGAGAATATTCTAGAGAAGTTG 435
||| ||| || | |||| |||||||| |||||||||| | ||| || | | |||||
Sbjct 476 ATGGCGCTTCTA-CTGATTCATCTTCTTGCTCTGAAACAAATAATGTTGTCCACAAGTTT 534
Query 436 AAAGGAAAAG 445
||||| ||||
Sbjct 535 AAAGGCAAAG 544
Score = 296 bits (160), Expect = 6e-79
Identities = 232/266 (87%), Gaps = 8/266 (3%)
Strand=Plus/Plus
Query 440 GAAAAGAGTTGATTAACCGGATTCATGAAGTTGGCACACTTGCCCAGATTTCAAGTATCC 499
||||||||||| ||||||| ||| | |||| ||||| ||||| ||||||||||||||||
Sbjct 566 GAAAAGAGTTGCTTAACCGTATTTACCAAGTGGGCACTCTTGCTCAGATTTCAAGTATCC 625
Query 500 AAGGTGAGCAAGTCATCCTTATTGGTCACAGACAACTTCGAATAACAGAGATGGTGAGTG 559
|||||||||||||||||||| |||||| ||||| ||||||||||| | ||| | || ||
Sbjct 626 AAGGTGAGCAAGTCATCCTTGTTGGTCGCAGACGACTTCGAATAA-A-AGA-GATG-GT- 680
Query 560 AGAGTGAAGATCCCCTAACCGTCAAAGTTGACCATCTAAAGGATAAGCCATATGACAAGG 619
|||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct 681 -GAGTGAAGATCCTCTAACCGTCAACGTTTACCATTTAAAGGATAAGCCATATGACAAGG 739
Query 620 ACGATGATGTCATCAAGGCAA-CATACTTTCAAGTGATGTCGACACTTAGGGATGTCTTA 678
|| ||| |||||||||||||| | ||| || |||| || |||| |||||||||||||||
Sbjct 740 ACAATGCTGTCATCAAGGCAAGC-TACGTTGAAGTTATCTCGATGCTTAGGGATGTCTTA 798
Query 679 AAGACAACTTCACTCTGGAGAGATCA 704
|||| || ||||||||||||||||||
Sbjct 799 AAGATAAATTCACTCTGGAGAGATCA 824
Score = 224 bits (121), Expect = 3e-57
Identities = 153/168 (91%), Gaps = 4/168 (2%)
Strand=Plus/Plus
Query 758 ATATAGGTGAATTCAATTATCCAA-AGTTAGCCGATTTTGGAGCTGGGATCTCTGGCGCT 816
|||||||||| |||| |||| ||| | ||||| ||||||||||| |||||||||||||||
Sbjct 827 ATATAGGTGACTTCAGTTAT-CAACATTTAGCTGATTTTGGAGCCGGGATCTCTGGCGCT 885
Query 817 AACAAACATCAAAATCAGGGGGTTCTTGA-AGAACTGGATGTTCACAAACGTCTAGAGTT 875
||||||||||||||||||||||||||| | ||||||||||||||| |||||||| |||||
Sbjct 886 AACAAACATCAAAATCAGGGGGTTCTT-ATAGAACTGGATGTTCATAAACGTCTGGAGTT 944
Query 876 GACGCTGGAATTGGTGAAAAAAGAAGTTGAAATTAACAAGATTCAAGA 923
|||| ||||||||||||||||| |||| ||||||||||||||| ||||
Sbjct 945 GACGTTGGAATTGGTGAAAAAACAAGTAGAAATTAACAAGATTAAAGA 992
> Ahg489519 jgi|Araly1|489519|fgenesh2_kg.6__2653__AT5G26860.1
Length=3264
Score = 1652 bits (894), Expect = 0.0
Identities = 1496/1782 (84%), Gaps = 59/1782 (3%)
Strand=Plus/Plus
Query 216 CCTGGACGATTGTCTAACGGTTATAGCATTGCCATTGCCCCACAAGCCTCTTATTCCTGG 275
||| || |||||| |||||||| |||||||||| |||| || | ||| ||| |||||||
Sbjct 415 CCT-GAAGATTGTTTAACGGTTCTAGCATTGCCGGTGCCACATAGGCCGCTTTTTCCTGG 473
Query 276 CTTTTACATGCCAATATATGTCAAGGATCCTAAAGTTCTTGCAGCTTTACAAGAGAGTAG 335
|||||||||||||| |||||||||||||||||||| || ||||| ||||||||||| ||
Sbjct 474 TTTTTACATGCCAATCTATGTCAAGGATCCTAAAGTACTCGCAGCCTTACAAGAGAGCAG 533
Query 336 AAGACAACAAGCTCCATATGCAGGGGCTTTCCTT-TTGAAGGATGACGCGTCATCTGACT 394
||||| ||||||||||||||||| ||||||||| || ||||||||| | ||| |||| |
Sbjct 534 AAGACGGCAAGCTCCATATGCAGGAGCTTTCCTTCTT-AAGGATGACCCATCAGCTGATT 592
Query 395 CATCTTCGAGCT-CTGAAACTGAGAATATTC-TAGA-GAAGTTGAAAGGAAAAGAGTTGA 451
||||||| || | |||| | || || | | || | | || ||||||| |||||||||
Sbjct 593 CATCTTCAAG-TACTGACGCAGA-AAAAAACATAAATG-AGCTGAAAGGGAAAGAGTTGC 649
Query 452 TTAACCGGATTCATGAAGTTGGCACACTTGCCCAGATTTCAAGTATCCAAGGTGAGCAAG 511
|||||||| |||| ||||||||||||||||| |||||||||||||||||||| || ||||
Sbjct 650 TTAACCGGCTTCACGAAGTTGGCACACTTGCTCAGATTTCAAGTATCCAAGGGGACCAAG 709
Query 512 TCATCCTTATTGGTCACA-GACAACTTCGAATAACAGAGATGGTGAGTGAGAGTGAAGAT 570
| || ||| ||||||| | || |||||| |||||||||||||||||||| | | | |
Sbjct 710 TTATACTTGTTGGTCATAGGA-GACTTCGCATAACAGAGATGGTGAGTGA-A--G-A-A- 762
Query 571 CCCCTAACCGTCAAAGTTGACCATCTAAAGGATAAGCCATATGACAAGGACGATGATGTC 630
|| || ||||||||||| || ||||| |||||||| || | ||||| |||||||||||||
Sbjct 763 CCACTTACCGTCAAAGTCGATCATCTTAAGGATAATCCCTTTGACATGGACGATGATGTC 822
Query 631 ATCAAGGCAACATAC-TTTCAAGTGATGTCGACACTTAGGGATGT-CTTAAAGACAACTT 688
||||||||||||| | ||| |||| || || || ||||||||||| | ||||||||| ||
Sbjct 823 ATCAAGGCAACAT-CTTTTGAAGTTATTTCAACTCTTAGGGATGTAC-TAAAGACAAGTT 880
Query 689 CACTCTGGAGAGATCATGTTCGGACATATACCCAGGCATGTTCTCTTCATATTTGGCACT 748
|||| ||||||||||| |||| ||||||||||||||||| || || | ||
Sbjct 881 CACTATGGAGAGATCACGTTCAAACATATACCCAGGCATG---TC-TC--A---GG---- 927
Query 749 GCTTGAGACATATAGGTGAATTCAATTATCCAAAG-TTAGCCGATTTTGGAGCTGG-GAT 806
| | | |||||||||||| |||| |||||| | | ||||||||||||||||| || ||
Sbjct 928 G-TACA-ACATATAGGTGATTTCACTTATCC-ACGATTAGCCGATTTTGGAGC-GGCTAT 983
Query 807 CTCTGGCGCTAACAAACATCAAAATCAGGGGGTTCTTGAAGAACTGGATGTTCACAAACG 866
| ||| || || | |||||| ||| | |||||||||||||||||||||||||||||
Sbjct 984 ATGTGGTGCAAATAGGCATCAAGCTCAAGAAGTTCTTGAAGAACTGGATGTTCACAAACG 1043
Query 867 TCTA-GAGTTGACGCTGGAATTGGTGAAAAAAGAAGTTGAAATTAACAAGATTCAAGAAT 925
||| | |||||||||||||||| ||||||||||| | ||||||| ||||||||| ||||
Sbjct 1044 TCTCCG-GTTGACGCTGGAATTGATGAAAAAAGAAATGGAAATTAGCAAGATTCAGGAAT 1102
Query 926 CCATAGCAAAAGCTGTTGAAGAAAAATTTAGTGGCGAT-AGACGTCG-TATCATACTAAA 983
||||||||||||| ||||||||||| |||| || || | |||||| || | | |||||
Sbjct 1103 CCATAGCAAAAGCAATTGAAGAAAAAATTAGCGGTGAGCA-ACGTCGGTA-CTTGCTAAA 1160
Query 984 GGAGCAGATCAATGCTATAAAAAAGGAGCTTGGCGGGGAGACAGAC-AGCAAATCTGCAC 1042
|||||| |||| |||||||| ||||||||||| | ||||||||| | |||||||||||
Sbjct 1161 TGAGCAGCTCAAGGCTATAAAGAAGGAGCTTGGTGTGGAGACAGATGA-CAAATCTGCAC 1219
Query 1043 TTTCTGAAAAGTTTAGGGGGAGGATTGA-CCCTATTAAAGACAAGATTCCAGGACATGTA 1101
|||||| |||||||| || |||||||| ||| | || || || ||||||| |||||||
Sbjct 1220 TTTCTGCAAAGTTTAAGGAAAGGATTGAGCCCAAC-AAGGAAAAAATTCCAGCACATGTA 1278
Query 1102 CTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCAGCTGTTAGAAACCAGTTCTAGCGAA 1161
|| ||||||||||||| ||||||| ||| |||||||||||||| | ||||| || |||
Sbjct 1279 TTACAAGTCATAGAAGAGGAGCTTACAAAGCTGCAGCTGTTAGAGGCGAGTTCAAGTGAA 1338
Query 1162 TTCGATGTGACTTGTAACTACCTTGATTGGTTGACCGTGTTGCCTTGGGGAAATTTCAGT 1221
|| | ||||| ||||||||||||||||||||||| | |||||||||||||||| ||||
Sbjct 1339 TTTAACGTGACGCGTAACTACCTTGATTGGTTGACCATATTGCCTTGGGGAAATTACAGT 1398
Query 1222 GATGAGAATTTTAATGTCCTACGGGCAGAAAAGATTCTTGACGAGGATCATTACGGATTA 1281
||||| |||||| |||| | ||||| |||| ||||||||||||||||| || || |||
Sbjct 1399 GATGAAAATTTTGATGTTGTGGGGGCACAAAAAATTCTTGACGAGGATCACTATGGCTTA 1458
Query 1282 TCTGATGTAAAAGAAAGAATACTAGAGTTTATTGCTGTGGGAGGACTTAGAGGCACTTCA 1341
|| || ||||| ||||||||||| || |||||||| |||||| ||||||||||||||||
Sbjct 1459 TCAGACGTAAAGGAAAGAATACTGGAATTTATTGCGGTGGGAAGACTTAGAGGCACTTCG 1518
Query 1342 CAAGGGAAGATCATTTGTCTCTCTGGCCCAACTGGAGTAGGTAAAACTAGCATTGGGCGT 1401
|||||||| ||||| || ||||| ||||| |||||||||| |||||||| ||||| |||
Sbjct 1519 CAAGGGAAAATCATATGCCTCTCGGGCCCTCCTGGAGTAGGCAAAACTAGTATTGGTCGT 1578
Query 1402 TCAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGTTCTCTGTTGGAGGACTATCCGAT 1461
|| ||||||||||||||| | |||||||| |||||||||||||| ||||| || | |||
Sbjct 1579 TCTATTGCACGTGCTCTTAATCGCAAGTTTTTCCGGTTCTCTGTGGGAGGGTTAGCAGAT 1638
Query 1462 GTTGCTGAGATTAAGGGGCATCGTCGAACGTATATTGGTGCCATGCCTGGAAAGATGGTG 1521
|| |||||||| ||||||||||||||||| ||| |||| |||||||| ||||||||||||
Sbjct 1639 GTCGCTGAGATCAAGGGGCATCGTCGAACATATGTTGGCGCCATGCCAGGAAAGATGGTG 1698
Query 1522 CAGTGTCTAAAGAATGTGGGAACAGAAAATCCTCTTGTTCTGATCGATGAGATTGATAAG 1581
||||||||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||
Sbjct 1699 CAGTGTCTAAAGAGTGTGGGGACAGCAAATCCTCTTGTTCTAATCGATGAGATTGATAAG 1758
Query 1582 CTTGGAGTTAGGGGCCAC-CATGGCGACCCAGCCAGTGCAATGTTGGAGCTTTTGGATCC 1640
|| || | || ||||| | ||| |||||||||||||| ||||||||||| |||||||
Sbjct 1759 CTCGG-G--AGAGGCCATGC-TGGTGACCCAGCCAGTGCTTTGTTGGAGCTTCTGGATCC 1814
Query 1641 AGAGCAGAATGCAAATTTTCTAGACCACTATCTCGATGTTCCTATTGA-CTTATCCAAGG 1699
|||||| || ||||||||||| |||||||||||||||||| ||||||| || ||| ||||
Sbjct 1815 AGAGCAAAACGCAAATTTTCTGGACCACTATCTCGATGTTACTATTGATCT-ATCAAAGG 1873
Query 1700 TTTTATTTGTATGCACAGCAAACGTGACAGATACCATTCCGGGTCCTCTGCTAGACAGAA 1759
|||||||||| ||||||||||| |||| ||| | ||||| |||||||||||||||||
Sbjct 1874 TTTTATTTGTGTGCACAGCAAATGTGATAGACATGATTCCAAATCCTCTGCTAGACAGAA 1933
Query 1760 TGGAGGTGATCACTCTCT-CAGGGTACATTACTGATGAGAAAATGCATATCGCTAGAGAC 1818
|||||||||| || | | | ||||| || ||||| |||||| | |||||||| ||||||
Sbjct 1934 TGGAGGTGATTTCTAT-TGCGGGGTATATCACTGACGAGAAAGTTCATATCGCAAGAGAC 1992
Query 1819 TATTTGGAGAAAACCGCACGCAGAGATTGTGGCATTAAGCCTGAACAGGTTGATGTGAGC 1878
|||||||| ||||| ||||| |||||||||| | ||||||||||||||||| |||||
Sbjct 1993 TATTTGGAAAAAACTGCACGTGGAGATTGTGGTGTCAAGCCTGAACAGGTTGAGGTGAGT 2052
Query 1879 GATGCAGCTTTTCTTTCCTTGATAGAACATTACTGCAGAGAAGCAGGAGTTAGAAATCTC 1938
||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||
Sbjct 2053 GATGCAGCTCTTCTTTCCTTGATAGAAAATTACTGCAGAGAAGCAGGTGTTAGGAATCTC 2112
Query 1939 CAGAAGCAGATTGAGAAGATTTTTCGTAAGATTGCTCTTAAA 1980
||||| ||||| |||||||||| ||||||||||| ||||||
Sbjct 2113 CAGAAACAGATCGAGAAGATTTACCGTAAGATTGCACTTAAA 2154
> Ahg887430 jgi|Araly1|887430|Al_scaffold_0845_1
Length=780
Score = 1122 bits (607), Expect = 0.0
Identities = 700/743 (94%), Gaps = 14/743 (2%)
Strand=Plus/Plus
Query 2089 ACCTCTGCAGAAGGATCCACTGTGTTGACAGATGAGTTGGCAACTGGGGATCCAACAGAA 2148
|||| | |||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 50 ACCT-TTCAGAAGGATCCACTGTGTTGACAGATGATTTGGCAACTGGGGATTTAACAGAA 108
Query 2149 TCAACGACTGAGCAGAGCGGAGAGGTAGCTGAAACGGTTGAAAAGTATATGATTGATGAA 2208
||||||||||||||||||||||||||| | | |||||||| |||||||||||||
Sbjct 109 TCAACGACTGAGCAGAGCGGAGAGGTA---G---C---TGAAAAGTTTATGATTGATGAA 159
Query 2209 TCAAACCTTTCAGATTATGTAGGCAAGCCAGTATTCCAGGAAGAGAAGATATATGAGCAG 2268
|||||||||||||||||| |||||||||||||||| |||| |||||| ||||| | |||
Sbjct 160 TCAAACCTTTCAGATTATATAGGCAAGCCAGTATTTCAGGCAGAGAAAATATACAAACAG 219
Query 2269 ACACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACATCCATGGGGGGCTCAACATTGTAC 2328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 220 ACACCAGTCGGGGTTGTAATGGGTCTAGCTTGGACATCCATGGGGGGCTCAACATTGTAC 279
Query 2329 ATAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAAGGTGGTCTTCATATAACGGGTCGG 2388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 280 ATAGAGACAACCTTTGTAGAAGAAGGAGAAGGCAAAGGTGGTCTTCATATAACGGGTCGG 339
Query 2389 CTTGGGGATGTGATGAAAGAAAGCGCAGAGATAGCTCACACAGTCGCGAGAAGAATAATG 2448
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 340 CTTGGGGATGTGATGAAAGAAAGCGCAGAGATTGCTCACACAGTCGCCAGAAGAATAATG 399
Query 2449 CTGGAGAAAGAACCCGAGAACAAGTTGTTTGCGAATTCCAAGCTTCATCTACATGTACCT 2508
|||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 400 CTGGAGAAAGAACCGGAGAACAAGTTCTTTGCGAATTCCAAGCTTCATTTACATGTACCT 459
Query 2509 GCAGGAGCCACACCAAAAGACGGCCCAAGCGCAGGCTGCACCATGATAACTTCATTGCTA 2568
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 460 GCAGGAGCCACTCCAAAAGACGGTCCAAGCGCAGGCTGCACCATGATAACTTCATTGCTA 519
Query 2569 TCACTTGCCTTGAAGAAGCCTGTAAGGAAGGATCTTGCAATGACTGGAGAAGTCACTTTG 2628
|||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 520 TCACTTGCCTCGAAGAAGCCAGTAAGGAAGGATCTTGCAATGACCGGAGAAGTCACTTTG 579
Query 2629 ACCGGTAGAATCCTTGCGATTGGCGGCGTGAAAGAGAAGACTATAGCTGCAA-GACGGAG 2687
|| |||||||| ||||| ||||||||||||||||||||||| |||||||||| | |||||
Sbjct 580 ACGGGTAGAATTCTTGCAATTGGCGGCGTGAAAGAGAAGACAATAGCTGCAAAG-CGGAG 638
Query 2688 TCAAGTGAAGGTGATAATATTCCCTGAGGCTAACCGGAGAGATTTTGATGAGCTGGCGAG 2747
|||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
Sbjct 639 TCAAGTGAAGGTGATAATATTCCCGGAGGCTAACCGGCGAGATTTTGATGAGCTGGCG-G 697
Query 2748 AAA-CGTGAAAGAAGGGCTCGAAGTTCATTTCGTGGATGAATATGAGCAGATTTTCGAGC 2806
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 698 AAAACGTGAAAGAAGGGCTCGAAGTTCATTTCGTGAATGAATATGAGCAGATTTTCGAGC 757
Query 2807 TAGCCTTTGGCTATGACCATTAG 2829
|||||||||||||||||||||||
Sbjct 758 TAGCCTTTGGCTATGACCATTAG 780
> Ahg887843 jgi|Araly1|887843|Al_scaffold_0881_1
Length=1053
Score = 715 bits (387), Expect = 0.0
Identities = 447/476 (94%), Gaps = 3/476 (1%)
Strand=Plus/Plus
Query 1228 AATTTTAATGTCCTACGGGCAGAAAAGATTCTTGACGAGGATCATTACGGATTATCTGAT 1287
|||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 532 AATTTTGATGTCCTACGGGCAGAAAAGATGCTTGACGAGGATCATTACAGATTATCTGAA 591
Query 1288 GTAAAAGAAAGAATACTAGAGTTTATTGCTGTGGGAGGACTTAGAGGCACTTCACAAGGG 1347
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 592 GTAAAAGAAAGAATACTAGAGTTTATTGCTGTGGGAAGACTTAGAGGCACTTCA-AA--A 648
Query 1348 AAGATCATTTGTCTCTCTGGCCCAACTGGAGTAGGTAAAACTAGCATTGGGCGTTCAATT 1407
|||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 649 AAGATCATACGTCTTTCTGGCCCACCTGGAGTAGGTAAAACTAGCATTGGGCGTTCAATT 708
Query 1408 GCACGTGCTCTTGACCGCAAGTTCTTCCGGTTCTCTGTTGGAGGACTATCCGATGTTGCT 1467
||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||
Sbjct 709 GCACGTGCTCTTGACTGCAAGTTCTTCCTGTTCTCTGTTGGAGGACTATTTGATGTTGCT 768
Query 1468 GAGATTAAGGGGCATCGTCGAACGTATATTGGTGCCATGCCTGGAAAGATGGTGCAGTGT 1527
|| ||||||||||| |||||||| | |||||||||||||||||||||||||||||| |||
Sbjct 769 GAAATTAAGGGGCACCGTCGAACATGTATTGGTGCCATGCCTGGAAAGATGGTGCAATGT 828
Query 1528 CTAAAGAATGTGGGAACAGAAAATCCTCTTGTTCTGATCGATGAGATTGATAAGCTTGGA 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 829 CTAAAGAATGTGGGAACAGAAAATCCTCTTGTTCTGATCGATGAGATTGATAAGCTTGGA 888
Query 1588 GTTAGGGGCCACCATGGCGACCCAGCCAGTGCAATGTTGGAGCTTTTGGATCCAGAGCAG 1647
|||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GTTAGGTGCCACGATGGTGACCCAGCCAGTGCAATGTTGGAGCTTTTGGATCCAGAGCAG 948
Query 1648 AATGCAAATTTTCTAGACCACTATCTCGATGTTCCTATTGACTTATCCAAGGTTTT 1703
||||||||||||||||||||||||||||| || |||||| |||||||||||||||
Sbjct 949 AATGCAAATTTTCTAGACCACTATCTCGACATTACTATTGGCTTATCCAAGGTTTT 1004
Score = 588 bits (318), Expect = 8e-167
Identities = 395/431 (92%), Gaps = 10/431 (2%)
Strand=Plus/Plus
Query 723 GGCATGTTCTCTTCATATTTGGCACTGCTTGAGACATATAGGTGAATTCAATTATCCAAA 782
|||||||||||||||||| ||||||| |||| |||||||||||||| | ||||||||||
Sbjct 108 GGCATGTTCTCTTCATATCTGGCACTTCTTGCGACATATAGGTGAAATAAATTATCCAAG 167
Query 783 GTTAGCCGATTTTGGAGCTGGGATCTCTGGCGCTAACAAACATCAAAATCAGGGGGTTCT 842
||||||||| | |||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct 168 GTTAGCCGACTCTGGAGCCGGGATCTCTGGCGCTAACAAACATCAAAATCAGGGTTTTTT 227
Query 843 TGAAGAACTGGATGTTCACAAACGTCTAG-AGTTGACGCTGGAATTGGTGAAAAAAGAAG 901
|||||||||||||||||| ||||||| || ||||||| ||||||||||||||||||||||
Sbjct 228 TGAAGAACTGGATGTTCATAAACGTC-AGGAGTTGACACTGGAATTGGTGAAAAAAGAAG 286
Query 902 TTGAAATTAACAAGATTCAAGAATCCATAGCAAAAGCTGTTGAAGAAAAATTTAGTGGCG 961
||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 287 TTGAAATCAACAAGATTCAAGAATCCATAGCAAAAGTTGTTGAAGAAAAAATTAGTGGCG 346
Query 962 ATAGACGTCGTATCATACTAAAGGAGCAGATCAATGCTATAAAAAAGGAGCTTGGCGGGG 1021
| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 347 ACAGACGTCGTATCATACTAACGGAGCAGATCAATGCTATAAAAAAGGAGCTTGGCGTGG 406
Query 1022 AGACAGAC-AGCAAATCTGCACT-TTCTGAAAAGTTTAGGGGGAGGATTGACCCTATTAA 1079
|||||||| || ||||||||| | |||| || ||||||||| |||||||||||||||||
Sbjct 407 AGACAGACGAG-AAATCTGCA-TGTTCT-AA--GTTTAGGGGAAGGATTGACCCTATTAA 461
Query 1080 AGACAAGATTCCAGGACATGTACTAAAAGTCATAGAAGAAGAGCTTAAAAAACTGCAGCT 1139
||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 462 AGACAAGATTCCACAACATGTACTAAAAGTCGTAGAAGAAGAGCTTAAAAG-CTGCAGCT 520
Query 1140 GTTAGAAACCA 1150
||| |||||||
Sbjct 521 GTTTGAAACCA 531
Score = 161 bits (87), Expect = 2e-38
Identities = 99/105 (94%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 561 GAGTGAAGATCCCCTAACCGTCAAAGTTGACCATCTAAAGGATAAGCCATATGACAAGGA 620
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 3 GAGTGAAGATCCTCTAACCGTCAAAGTTCACCATCTAAAGGATAAGCCATATGACAAAGA 62
Query 621 CGATGATGTCATCAAGGCAACATACTTTCAAGTGATGTCGACACT 665
||||||||||||||| ||||||||||||||||| ||||| |||||
Sbjct 63 CGATGATGTCATCAAAGCAACATACTTTCAAGTTATGTCAACACT 107
> Ahg359743 jgi|Araly1|359743|fgenesh1_pg.C_scaffold_845000001
Length=864
Score = 340 bits (184), Expect = 3e-92
Identities = 268/307 (87%), Gaps = 12/307 (4%)
Strand=Plus/Plus
Query 440 GAAAAGAGTTGATTAACCGGATTCATGAAGTTGGCACACTTGCCCAGATTTCAAGTATCC 499
||||||||||| ||||||| ||| | |||| ||||| ||||| ||||||||||||||||
Sbjct 566 GAAAAGAGTTGCTTAACCGTATTTACCAAGTGGGCACTCTTGCTCAGATTTCAAGTATCC 625
Query 500 AAGGTGAGCAAGTCATCCTTATTGGTCACAGACAACTTCGAATAACAGAGATGGTGAGTG 559
|||||||||||||||||||| |||||| ||||| ||||||||||| | ||| | || ||
Sbjct 626 AAGGTGAGCAAGTCATCCTTGTTGGTCGCAGACGACTTCGAATAA-A-AGA-GATG-GT- 680
Query 560 AGAGTGAAGATCCCCTAACCGTCAAAGTTGACCATCTAAAGGATAAGCCATATGACAAGG 619
|||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct 681 -GAGTGAAGATCCTCTAACCGTCAACGTTTACCATTTAAAGGATAAGCCATATGACAAGG 739
Query 620 ACGATGATGTCATCAAGGCAA-CATACTTTCA-AGTGATGTCGACACTTAGGGATGTCTT 677
|| ||| |||||||||||||| | ||| | | ||| || |||| ||||||||||||||
Sbjct 740 ACAATGCTGTCATCAAGGCAAGC-TACGT-CGTAGTTATCTCGATGCTTAGGGATGTCTT 797
Query 678 AAAGACAACTTCACTCTGGAGAGATCATGTTCGGACATATACCCAGGCATGTTCT-CTTC 736
|||||||| |||||||||||||||||| |||| |||||||||||||||||||| | ||||
Sbjct 798 AAAGACAAATTCACTCTGGAGAGATCAAGTTCAGACATATACCCAGGCATGTT-TGCTTC 856
Query 737 ATATTTG 743
|||||||
Sbjct 857 ATATTTG 863
Score = 298 bits (161), Expect = 2e-79
Identities = 221/250 (88%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 198 TGTCTCAGCTAAACCTCA-CCTGGACGATTGTCTAACGGTTATAGCATTGCCATTGCCCC 256
||||||| |||| ||| | ||| ||||||||||||||||||||||||||||||||||| |
Sbjct 297 TGTCTCAACTAACCCT-ACCCTCGACGATTGTCTAACGGTTATAGCATTGCCATTGCCTC 355
Query 257 ACAAGCCTCTTATTCCTGGCTTTTACATGCCAATATATGTCAAGGATCCTAAAGTTCTTG 316
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 356 ACAAGCCTCTTATTCCTGGCTTTTACATGCCAATCTATGTCAAGGATCCTAAAGTTCTTG 415
Query 317 CAGCTTTACAAGAGAGTAGAAGACAACAAGCTCCATATGCAGGGGCTTTCCTTTTGAAGG 376
|||||||||||||||| | |||||||||| ||||||||| |||||||||||||||||||
Sbjct 416 CAGCTTTACAAGAGAGCACAAGACAACAATCTCCATATGTTGGGGCTTTCCTTTTGAAGG 475
Query 377 ATGACGCGTC-ATCTGACTCATCTTCGAGCTCTGAAACTGAGAATATTCTAGAGAAGTTG 435
||| ||| || | |||| |||||||| |||||||||| | ||| || | | |||||
Sbjct 476 ATGGCGCTTCTA-CTGATTCATCTTCTTGCTCTGAAACAAATAATGTTGTCCACAAGTTT 534
Query 436 AAAGGAAAAG 445
||||| ||||
Sbjct 535 AAAGGCAAAG 544
> Ahg903430 jgi|Araly1|903430|Al_scaffold_0003_558
Length=537
Score = 291 bits (157), Expect = 3e-77
Identities = 403/519 (78%), Gaps = 28/519 (5%)
Strand=Plus/Plus
Query 1049 AAAAGTTTAGGGGGAGGATTGACCCTATTAAAGAC--AAGATTCCAGGACATGTACTAAA 1106
|||||||||||| |||||||| |||| | ||| | || || ||| || |||| | |
Sbjct 2 AAAAGTTTAGGGAAAGGATTGAGCCTAAT-AAG-CTAAAAATCCCAAAACGTGTATTGCA 59
Query 1107 AGTCATAGAAGAAGAGCTTAAAAAACTGCAGCTG-TTAGAAACCAGTTCTAGCGA-ATT- 1163
||| || || |||||||||| ||| || || || ||| | ||| | || ||| ||
Sbjct 60 AGTTATTGATGAAGAGCTTACGAAATTGGAGGTGTTTA-AGACC-G--GTAACGACTTTA 115
Query 1164 CGATGTGACTTGTAACTACCTTGATTGGTTGACCGTGTTGCCTTGGGGAAATTTCAGTGA 1223
| || | | ||||||||||||| ||||||||||| || || |||||||||| |||||
Sbjct 116 CTAT-CG-CCAGTAACTACCTTGAGTGGTTGACCGTATTTCCCTGGGGAAATTACAGTGG 173
Query 1224 TGAGAATTTTAATGTCCT-ACGGGCAGAAAAGATTCTTGACGAGGATCATTACGGATTAT 1282
|||||||| | ||||| | | | ||||||||||||||||||||||||||||| || ||||
Sbjct 174 TGAGAATTGTGATGTCATGA-GTGCAGAAAAGATTCTTGACGAGGATCATTATGGCTTAT 232
Query 1283 CTGATGTAAAAGAAAGAATACTAGAGTTTATTGCTGTGGGAGGACTTAGAGGCACTTCAC 1342
|| ||||||||||||||||| |||| |||||||| | | ||||||||||||| | |
Sbjct 233 CTAATGTAAAAGAAAGAATAATAGAACACATTGCTGTTGAAAAACTTAGAGGCACTCCTC 292
Query 1343 AAGGGAAGATCATTTGTCTCTCTGGCCCAACTGGAGTAGGTAAAACTAGCATTGGGCGTT 1402
|||||||||| |||||||| | || || | || || ||||| |||||||||| ||||
Sbjct 293 AAGGGAAGATAATTTGTCTAGCGGGTCCTCCCGGGGTTGGTAAGACTAGCATTGCTCGTT 352
Query 1403 CAATTGCACGTGCTCTTGACCGCAAGTTCTTCCGGTTCTCTGTTGGAGGACTATCCGATG 1462
| ||||||||| ||||| ||||||| ||||| | |||||||||||||| |||| | |
Sbjct 353 CTATTGCACGTTCTCTTCACCGCAATTTCTTTCAATTCTCTGTTGGAGGGCTATGT-ACG 411
Query 1463 T-TGCTGAGATTAAGGGGCAT-CGTCGAACGTAT-ATTGGTGCCATGCCTGG-AAAGATG 1518
|||| | ||||||||| || | |||||| | | | | ||||| | ||| |||||||
Sbjct 412 GCTGCTAACATTAAGGGG-ATTCCTCGAACATTTTACTA-TGCCACAC-TGGGAAAGATG 468
Query 1519 GTGCAGTGTCTAAAGA--A--TGTGGGAACAGA-AAATC 1552
||||| |||||||| | | |||||||||||| |||||
Sbjct 469 GTGCAATGTCTAAAAATTAAGTGTGGGAACAGAGAAATC 507
> Ahg918995 jgi|Araly1|918995|scaffold_100276.1
Length=491
Score = 148 bits (80), Expect = 2e-34
Identities = 101/111 (91%), Gaps = 2/111 (2%)
Strand=Plus/Plus
Query 2656 GTGAAAGAGAAGACTATAGCTGCAAGACGGAGTCAAGTGAAGGTGATAATATTCCCTGAG 2715
|||||| |||||||||||||||||||||||||||||||||| |||| ||| |||| |||
Sbjct 208 GTGAAAAAGAAGACTATAGCTGCAAGACGGAGTCAAGTGAAAATGATTATACTCCCAGAG 267
Query 2716 GCTAACCGGAGAGATTTTGATGAGCTGGCGAGAAA-CGTGAAAGAAGGGCT 2765
|||||||||| ||||||||||||||||||| |||| ||||||||||| |||
Sbjct 268 GCTAACCGGAAAGATTTTGATGAGCTGGCG-GAAAACGTGAAAGAAGTGCT 317
> Ahg351631 jgi|Araly1|351631|fgenesh1_pg.C_scaffold_6002224
Length=348
Score = 148 bits (80), Expect = 2e-34
Identities = 101/111 (91%), Gaps = 2/111 (2%)
Strand=Plus/Plus
Query 2656 GTGAAAGAGAAGACTATAGCTGCAAGACGGAGTCAAGTGAAGGTGATAATATTCCCTGAG 2715
|||||| |||||||||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct 202 GTGAAAAAGAAGACTATAGCTGCAAGACGGAGTCAAGTGAAAATGATTATATTCCCGGAA 261
Query 2716 GCTAACCGGAGAGATTTTGATGAGCTGGCGAGAAA-CGTGAAAGAAGGGCT 2765
|||||||||| ||||||||||||||||||| |||| ||||||||||| |||
Sbjct 262 GCTAACCGGAAAGATTTTGATGAGCTGGCG-GAAAACGTGAAAGAAGTGCT 311
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106766956735
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5