BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G06400.3
Length=3452
Score E
Sequences producing significant alignments: (Bits) Value
Ahg477943 jgi|Araly1|477943|fgenesh2_kg.3__644__AT3G06400.1 5757 0.0
Ahg488746 jgi|Araly1|488746|fgenesh2_kg.6__1880__AT5G18620.2 3565 0.0
> Ahg477943 jgi|Araly1|477943|fgenesh2_kg.3__644__AT3G06400.1
Length=3447
Score = 5757 bits (3117), Expect = 0.0
Identities = 3303/3393 (97%), Gaps = 12/3393 (0%)
Strand=Plus/Plus
Query 26 TTTATTTTAC-TTTCTCACAAGCGAAGCGAACCCTCGATCTCAAGGCGAAAGCAGATTTC 84
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3 TTTATTTTACTTTTC-CACAAGCGAAGCGAACCCTCGATCTCAAGGCGAAAGCAGATTTC 61
Query 85 GTAGCTTCCATGGCGAGAAATTCGAATTCCGATGAGGCTTTCTCGTCAGAGGAGGAAGAA 144
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 62 GTAGCTTCCATGGCGAGAAATTCGAATTCCGATGAGGCATTCTCGTCAGAGGAGGAAGAA 121
Query 145 GAGCGGGTTAAGGATAATGAAGAAGAAGATGAGGAGGAGCTCGAGGCTGTTGCTCGTTCT 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 GAGCGGGTTAAGGATAATGAAGAAGAAGATGAGGAGGAGCTCGAGGCTGTTGCTCGTTCT 181
Query 205 TCTGGCTCCGACGATGACGAAGTAGCCGCCGCCGACGAATCACCAGTCTCCGACGGAGAG 264
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct 182 TCTGGCTCCGACGATGACGAAGTAGTCGCCGCCGACGAATCCCCAGTCTCCGACGGAGAG 241
Query 265 GCTGCTCCCGTAGAAGATGATTACGAGGACGAAGAAGATGAGGAAAAAGCTGAAATCAGC 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 242 GCTGCTCCCGTAGAAGATGATTACGAGGACGAAGAAGATGAGGAAAAAGCTGAAATCAGC 301
Query 325 AAACGTGAGAAAGCCAGACTTAAAGAGATGCAGAAGTTGAAGAAGCAGAAGATTCAAGAG 384
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 302 AAACGTGAGAAAGCCAGACTTAGAGAGATGCAGAAATTGAAGAAGCAGAAGATTCAAGAG 361
Query 385 ATGCTGGAGTCGCAGAATGCTTCCATTGACGCGGATATGAACAATAAGGGAAAAGGGAGA 444
|||||||| || || ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 362 ATGCTGGACTCACAAAATGCTTCCATAGATGCGGATATGAACAATAAGGGAAAAGGGAGA 421
Query 445 CTGAAGTATCTTCTGCAGCAAACTGAGTTATTTGCCCACTTTGCTAAAA-GTGATGGATC 503
||||||||||||||||||||||||||||||||||| |||||||| |||| |||||| |||
Sbjct 422 CTGAAGTATCTTCTGCAGCAAACTGAGTTATTTGCACACTTTGC-AAAAGGTGATGCATC 480
Query 504 TTCTTCTCAGAAGAAGGCAAAAGGAAGGGGACGTCATGCTTCCAAAATAACTGAAGAGGA 563
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 481 TTCTTCTCAGAAGAAGGCTAAAGGAAGGGGTCGTCATGCTTCCAAAATAACTGAAGAGGA 540
Query 564 GGAAGACGAAGAGTATCTAAAGGAAGAAGAGGATGGCTTAACTGGATCTGGAAACACACG 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GGAAGACGAAGAGTATCTAAAGGAAGAAGAGGATGGCTTAACTGGATCTGGAAACACACG 600
Query 624 GTTACTCACACAGCCCTCTTGTATTCAAGGGAAGATGAGAGATTACCAATTAGCTGGTTT 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 GTTACTCACACAGCCCTCTTGTATTCAAGGGAAGATGAGAGATTACCAATTAGCTGGTTT 660
Query 684 GAACTGGCTCATTCGTCTTTATGAGAATGGCATAAATGGAATTCTTGCTGATGAAATGGG 743
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AAACTGGCTCATTCGGCTGTATGAGAATGGCATAAATGGAATTCTTGCTGATGAAATGGG 720
Query 744 TCTGGGGAAGACGCTTCAAACGATTTCTTTGTTGGCATATCTTCATGAATACAGGGGAAT 803
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 721 TCTGGGGAAGACGCTTCAAACGATTTCTTTGTTGGCATACCTTCATGAATACAGGGGAAT 780
Query 804 CAATGGTCCCCATATGGTGGTTGCTCCAAAATCAACACTTGGTAATTGGATGAACGAAAT 863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 CAATGGTCCCCATATGGTGGTTGCTCCAAAATCAACACTTGGTAATTGGATGAACGAAAT 840
Query 864 TCGCCGGTTTTGTCCTGTCCTACGTGCTGTGAAGTTCCTTGGTAATCCTGAGGAGAGGAG 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 TCGCCGGTTTTGTCCTGTCCTACGTGCTGTGAAGTTCCTTGGTAATCCTGAGGAGAGGAG 900
Query 924 ACATATTCGAGAAGACCTGCTAGTTGCTGGGAAATTTGATATTTGTGTCACAAGCTTTGA 983
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 901 ACATATTCGAGACGACCTGCTAGTTGCTGGGAAATTTGATATTTGCGTCACAAGCTTTGA 960
Query 984 GATGGCCATCAAAGAGAAGACAGCACTTCGTCGGTTTAGCTGGCGTTATATTATCATTGA 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 961 GATGGCCATCAAAGAGAAGACAGCACTTCGTCGGTTTAGCTGGCGTTATATTATCATCGA 1020
Query 1044 TGAAGCGCATCGAATCAAGAACGAGAATTCACTCCTTTCTAAAACCATGAGACTTTTTAG 1103
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1021 TGAAGCGCATAGAATCAAGAACGAGAATTCTCTCCTTTCTAAAACCATGAGACTTTTTAG 1080
Query 1104 CACCAATTATCGGCTTCTTATCACGGGGACCCCCCTTCAGAATAATCTCCATGAACTGTG 1163
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1081 CACCAATTATCGGCTTCTTATCACGGGAACCCCCCTTCAGAATAATCTTCATGAACTGTG 1140
Query 1164 GGCTCTTCTAAATTTTCTTCTGCCTGAGATTTTTAGTTCAGCAGAGACTTTTGATGAATG 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 GGCTCTTCTAAATTTTCTTCTGCCTGAGATTTTTAGTTCAGCAGAGACTTTTGATGAATG 1200
Query 1224 GTTTCAAATTTCTGGTGAGAATGACCAGCAAGAAGTTGTGCAACAACTGCACAAGGTTCT 1283
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1201 GTTTCAAATTTCTGGTGAGAATGACCAGCAAGAAGTTGTTCAACAACTTCACAAGGTTCT 1260
Query 1284 TCGACCATTTCTTCTTCGAAGACTAAAGTCAGATGTTGAGAAAGGTTTGCCACCGAAGAA 1343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TCGACCATTTCTTCTTCGAAGACTAAAGTCAGATGTTGAGAAAGGTTTGCCACCGAAGAA 1320
Query 1344 GGAGACCATACTTAAAGTTGGTATGTCTCAGATGCAAAAGCAATACTACAAGGCTTTACT 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 GGAGACCATACTTAAAGTTGGTATGTCTCAGATGCAAAAGCAATACTACAAGGCTTTACT 1380
Query 1404 GCAGAAGGATCTTGAAGCGGTTAATGCTGGTGGAGAACGCAAACGTCTGCTAAACATTGC 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 GCAGAAGGATCTTGAAGCGGTTAATGCTGGTGGAGAACGCAAACGTCTGCTAAACATTGC 1440
Query 1464 AATGCAACTGCGTAAATGCTGCAATCACCCCTATCTCTTCCAGGGTGCAGAACCTGGTCC 1523
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1441 AATGCAACTGCGTAAATGCTGCAATCACCCTTATCTCTTCCAGGGTGCAGAACCTGGTCC 1500
Query 1524 CCCATATACCACAGGAGATCACCTTATAACAAATGCTGGTAAGATGGTTCTCTTGGATAA 1583
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1501 CCCATATACCACAGGAGATCACCTTATAACAAATGCTGGTAAGATGGTTCTGTTGGATAA 1560
Query 1584 ATTGCTTCCTAAGTTGAAAGAACGTGATTCAAGGGTGCTGATATTTTCTCAGATGACAAG 1643
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1561 ATTGCTTCCTAAGTTGAAAGAACGTGATTCAAGGGTTCTGATATTTTCTCAGATGACAAG 1620
Query 1644 ACTTTTGGATATTCTTGAGGACTATTTAATGTATCGTGGTTACTTGTATTGCCGTATTGA 1703
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1621 ACTTTTGGATATTCTTGAGGACTATTTAATGTATCGTGGTTACCTGTATTGCCGCATTGA 1680
Query 1704 TGGAAACACTGGTGGTGACGAACGAGATGCCTCCATAGAAGCCTACAACAAGCCAGGAAG 1763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1681 TGGAAACACTGGTGGTGACGAACGAGATGCCTCCATAGAAGCCTACAACAAGCCAGGAAG 1740
Query 1764 TGAGAAATTTGTTTTCTTGTTATCTACTAGAGCTGGAGGGCTTGGTATCAATCTTGCTAC 1823
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1741 TGAGAAATTTGTTTTCTTGTTATCTACCAGAGCTGGAGGGCTTGGTATCAATCTTGCTAC 1800
Query 1824 TGCAGATGTTGTGATCCTTTACGATAGTGATTGGAACCCACAAGTCGACTTGCAAGCTCA 1883
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1801 TGCAGATGTTGTTATCCTGTACGATAGTGATTGGAACCCACAAGTCGACTTGCAAGCTCA 1860
Query 1884 GGATCGTGCCCATAGGATTGGTCaaaaaaaaGAAGTTCAAGTGTTTCGATTCTGCACTGA 1943
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1861 GGATCGTGCCCATAGAATTGGTCAAAAAAAAGAAGTTCAAGTGTTTCGATTCTGCACTGA 1920
Query 1944 GTCTGCTATTGAGGAGAAAGTGATTGAAAGAGCTTACAAGAAGTTAGCACTTGATGCTCT 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1921 GTCTGCTATTGAGGAGAAAGTGATTGAAAGAGCTTACAAGAAGTTAGCACTTGATGCTCT 1980
Query 2004 GGTTATTCAACAAGGGAGATTGGCAGAACAGAAAACTGTCAATAAGGATGAGTTGCTTCA 2063
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1981 GGTTATTCAGCAAGGGAGATTGGCAGAGCAGAAAACTGTCAATAAGGATGAGTTGCTTCA 2040
Query 2064 AATGGTAAGATATGGTGCTGAGATGGTGTTCAGTTCTAAAGATAGCACAATCACAGACGA 2123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2041 AATGGTAAGATATGGTGCTGAGATGGTGTTCAGTTCTAAAGATAGCACAATCACAGACGA 2100
Query 2124 GGATATTGATAGAATCATTGCCAAAGGAGAAGAGGCAACAGCTGAACTTGATGCTAAGAT 2183
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2101 GGATATTGATAGAATCATTGCCAAAGGAGAAGAGGCAACAGCTGAACTTGATGCCAAGAT 2160
Query 2184 GAAGAAATTCACAGAAGATGCTATACAGTTTAAAATGGATGACAGTAAGGGTGCTGACTT 2243
||||||||||||||||||||| |||||||||||||||||||||||| | |||||||
Sbjct 2161 GAAGAAATTCACAGAAGATGCGATACAGTTTAAAATGGATGACAGT--G----CTGACTT 2214
Query 2244 CTATGATTTTGATGATGACAATAAGGATGAAAACAAGCTCGATTTTAAAAAGATTGTAAG 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2215 CTATGATTTTGATGATGACAATAAGGATGAAAACAAGCTCGATTTTAAAAAGATTGTAAG 2274
Query 2304 CGACAATTGGAATGATCCCCCCAAGCGGGAGAGAAAGCGCAACTACTCTGAATCTGAGTA 2363
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 2275 CGACAATTGGAATGATCCCCCCAAACGGGAGAGAAAGCGCAACTACTCTGAATCTGAATA 2334
Query 2364 CTTTAAGCAAACATTGCGGCAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCGCG 2423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2335 CTTTAAGCAAACATTGCGGCAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCGCG 2394
Query 2424 CATGCCCCAGTTGCACGATTTCCAGTTCTTTAACATTCAGAGATTGACCGAGTTGTATGA 2483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2395 CATGCCCCAGTTGCACGATTTCCAGTTCTTTAACATTCAGAGATTGACCGAGTTGTATGA 2454
Query 2484 AAAGGAAGTACGTTATCTCATGCAAACACATCAGAAAAATCAGTTGAAAGACACAATTGA 2543
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2455 AAAGGAAGTACGTTATCTCATGCAAACACATCAGAAAAATCAGTTGAAAGACACTATTGA 2514
Query 2544 TGTTGAAGAACCAGAAGGTGGGGATCCCTTAACTACTGAAGAAGTAGAAGAAAAGGAGGG 2603
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |
Sbjct 2515 TGTTGAAGAACCAGAAGGTGGAGATCCCTTAACTGCTGAAGAAGTAGAAGAAAAGGAGCG 2574
Query 2604 ATTATTGGAGGAGGGTTTCTCAACATGGAGCAGAAGAGATTTTAATACTTTCCTCAGGGC 2663
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2575 ATTATTGGAGGAGGGTTTCTCAACATGGAGCAGAAGAGATTTCAATACTTTCCTCAGGGC 2634
Query 2664 TTGTGAGAAGTATGGCCGCAACGACATAAAAAGCATTGCCTCTGAGATGGAAGGGAAAAC 2723
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2635 ATGTGAGAAGTATGGCCGCAACGACATAAAAAGCATTGCCTCTGAGATGGAAGGGAAAAC 2694
Query 2724 AGAGGAAGAAGTTGAAAGATATGCCAAAGTATTTAAAGAGCGGTACAAGGAGCTGAACGA 2783
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 2695 AGAGGAAGAAGTTGAAAGATATGCCAAAGTATTCAAAGAGCGATACAAGGAGCTGAACGA 2754
Query 2784 CTATGATAGAATCATTAAGAACATTGAGAGGGGAGAGGCAAGGATCTCTAGGAAAGACGA 2843
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2755 CTATGATAGAATAATTAAGAACATTGAGAGGGGAGAGGCAAGGATCTCTAGGAAAGACGA 2814
Query 2844 AATCATGAAGGCCATAGGGAAGAAACTGGATCGCTACAGAAACCCTTGGCTGGAACTGAA 2903
||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 2815 AATCATGAAAGCCATAGGGAAGAAGCTGGATCGTTACAGAAACCCTTGGCTGGAACTGAA 2874
Query 2904 GATTCAATATGGTCAGAACAAAGGCAAGCTGTACAATGAAGAGTGTGACCGTTTCATGAT 2963
|||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||||||
Sbjct 2875 GATTCAGTATGGTCAGAACAAAGGAAAGTTGTACAATGAAGAGTGCGACCGTTTCATGAT 2934
Query 2964 CTGCATGATTCACAAACTTGGTTATGGGAATTGGGATGAGCTAAAGGCAGCATTTAGGAC 3023
||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct 2935 CTGCATGATCCACAAACTTGGGTATGGGAATTGGGATGAGCTGAAGGCAGCATTCAGGAC 2994
Query 3024 ATCGTCTGTGTTCAGGTTTGACTGGTTTGTGAAATCCCGCACGAGTCAGGAACTTGCAAG 3083
|||| || |||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 2995 ATCGCCTTTGTTCAGGTTCGACTGGTTTGTGAAATCTCGCACGAGTCAGGAACTTGCAAG 3054
Query 3084 AAGATGCGACACTCTGATTCGACTGATCGAGAAAGAGAACCAGGAGTTTGATGAAAGAGA 3143
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3055 AAGATGCGACACCCTGATTCGACTGATAGAGAAAGAGAACCAGGAGTTTGATGAAAGAGA 3114
Query 3144 GAGGCAAGCCCGCAAAGAGAAGAAGCTCGCGAAGAGTGCAACACCATCAAAGCGACCTTT 3203
|||||||||||| |||||||||||||| || |||||||||||||||||||| ||||||||
Sbjct 3115 GAGGCAAGCCCGTAAAGAGAAGAAGCTGGCAAAGAGTGCAACACCATCAAAACGACCTTT 3174
Query 3204 AGGAAGACAAGCAAGTGAGAGTCCTTCATCGACGAAGAAGCGGAAGCACCTGTCGATGAG 3263
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3175 AGGAAGACAAGCCAGTGAGAGTCCTTCATCGACGAAGAAGCGAAAGCACCTGTCGATGAG 3234
Query 3264 ATGAGATTATGTGTTTACGGATCTGTCGAGTCTTTGTTGTTACATATAGTTAAGCTAATG 3323
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 3235 ATGAGATTATGTGTTTACGGATTTGTTGAGTCTTTGTTGTTACATATAGTTAAGCTAATG 3294
Query 3324 TTAAAAACATAGCAAATGGATTTCATTCTGCTTTCATGAATGTTTGTC--CTGGTTTGAC 3381
| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 3295 TCAAAAACATAGCAAATGGATTTCATTCTGCTTTCGTGAATGTTTGTCGGCTGGTTTGAC 3354
Query 3382 TTGGATTTAATGAAATGACTTAATTATAATTTT 3414
|||||||||||||||||||||||||||||||||
Sbjct 3355 TTGGATTTAATGAAATGACTTAATTATAATTTT 3387
> Ahg488746 jgi|Araly1|488746|fgenesh2_kg.6__1880__AT5G18620.2
Length=3596
Score = 3565 bits (1930), Expect = 0.0
Identities = 2795/3208 (87%), Gaps = 78/3208 (2%)
Strand=Plus/Plus
Query 111 TTCCGATGAGGCTTTCTCGTCAGAGGAGGAAGAAGAGCGGGTTAAGGAT------AATGA 164
||| || ||||||| |||||| ||||||||| |||| ||||| ||| ||||
Sbjct 140 TTCAGACGAGGCTTACTCGTC---GGAGGAAGAGGAGCAAGTTAACGATCAGGCCAATGT 196
Query 165 AGAAGAAGATGAGGAGGAGCTCGAGGCTGTTGCTCGTTCTTCTGGCTCCGACGATGACGA 224
||||||||||| || ||||||||||| || ||||| ||| | || || ||||| || ||
Sbjct 197 GGAAGAAGATGATGAAGAGCTCGAGGCCGTCGCTCGCTCTGCGGGTTCTGACGAGGAAGA 256
Query 225 AGTAGCCGCCGCCGACGAATCACCAGTCTCCGACGGA-GAGGCTGCT-CCCGTAGAAGAT 282
|| | || | |||||||| |||| ||||| ||| || || | || | ||||||||||||
Sbjct 257 TGTTG-CG-C-CCGACGAAGCACCTGTCTCTGAC-GACGATGTTG-TCCCCGTAGAAGAT 311
Query 283 GA---TTACGAGGACGAAGAAGATGAGGAAAAAGCTGAAATCAGCAAACGTGAGAAAGCC 339
|| | | |||||||||||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 312 GACGCTGAAGAGGACGAAGAAGACGAGGAAAAAGCTGAGATCAGCAAACGTGAGAAGGCT 371
Query 340 AGACTTAAAGAGATGCAGAAGTTGAAGAAGCAGAAGATTCAAG-AGATGCTGGAGTCGCA 398
||||| ||||| ||||||||| ||||||||||||| |||| || | || | || || ||
Sbjct 372 AGACTCAAAGAAATGCAGAAGATGAAGAAGCAGAAAATTC-AGCAAATTTTAGACTCCCA 430
Query 399 GAATGCTTCCATTGACGCGGATATGAACAATAAGGGAAAAGGGAGACTGAAGTATCTTCT 458
||||||||||| || || |||||||||||||| ||||| |||||| |||||||||||||
Sbjct 431 AAATGCTTCCATAGATGCAGATATGAACAATAAAGGAAAGGGGAGATTGAAGTATCTTCT 490
Query 459 GCAGCAAACTGAGTTATTTGCCCACTTTGCTAAAAGTGA-TGGATCTTCTTCTCAGAAGA 517
||||||||||||||||||||| || |||||||||||||| | ||| | || |||||||
Sbjct 491 GCAGCAAACTGAGTTATTTGCACATTTTGCTAAAAGTGACCCG-TCTCCGTCCCAGAAGA 549
Query 518 AGGCAAAAGGAAGGGGACGTCATGCTTCCAAAATAACTGAAGAGGAGGAAGACGAAGAGT 577
||| ||||||||||| || ||| |||||||| ||||||| || |||||||| |||||||
Sbjct 550 AGGGGAAAGGAAGGGGTCGCCATTCTTCCAAACTAACTGAGGAAGAGGAAGATGAAGAGT 609
Query 578 ATCTAAAGGAAGAAGAGGATGGCTTA-A-CTGGATCTGGAAACACACGGTTACTCACACA 635
| |||| |||||||||| ||| || | ||||||||||| ||||||||| ||||||||
Sbjct 610 GTTTAAAAGAAGAAGAGGGTGG--TACAGCTGGATCTGGAGGCACACGGTTGCTCACACA 667
Query 636 GCCCTCTTGTATTCAAGGG-AAGATGAGAGATTACCAATTAGCTGGTTTGAACTGGCTCA 694
|||| ||||||||| |||| ||| | ||||||||||||||||||||||| ||||||||||
Sbjct 668 GCCCGCTTGTATTC-AGGGAAAGTTAAGAGATTACCAATTAGCTGGTTTAAACTGGCTCA 726
Query 695 TTC-GTCTTTATGAGAATGGCATAAATGGAATTCTTGCTGATGAAATGGGTCTGGGGAAG 753
||| || | || ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 727 TTCGGT-TGTACGAGAATGGCATAAATGGGATTCTTGCGGATGAAATGGGTCTGGGGAAG 785
Query 754 ACGCTTCAAACGATTTCTTTGTTGGCATATCTTCATGAATACAGGGGAATCAATGGTCCC 813
||||||||||| |||||||||||||| || || ||||| ||||||||||| ||||| |||
Sbjct 786 ACGCTTCAAACCATTTCTTTGTTGGCTTACCTGCATGAGTACAGGGGAATTAATGG-CCC 844
Query 814 -CATATGGTGGTTGCTCCAAAATCAACACTTGGTAATTGGATGAACGAAATTCGCCGGTT 872
|||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| ||
Sbjct 845 TCATATGGTAGTTGCTCCAAAATCAACCCTTGGTAACTGGATGAATGAAATTCGCCGATT 904
Query 873 TTGTCCTGTCCTACGTGCTGTGAAGTTCCTTGGTAATCCTGAGGAGAGGAGACATATTCG 932
|||||||||||| ||||||||||| || || |||||||| ||||| ||||||||||||||
Sbjct 905 TTGTCCTGTCCTGCGTGCTGTGAAATTTCTCGGTAATCCCGAGGAAAGGAGACATATTCG 964
Query 933 AGAAGACCTGCTAGTTGCTGGGAAATTTGATATTTGTGTCACAAGCTTTGAGATGGCCAT 992
||||| ||||||||||| |||||||| || |||||||| ||||||||||||||||| ||
Sbjct 965 TGAAGAACTGCTAGTTGCAGGGAAATTCGACATTTGTGTTACAAGCTTTGAGATGGCTAT 1024
Query 993 CAAAGAGAAGACAGCACTT-CGTCGGTTTAGCTGGCGTTATATTATCATTGATGAAGCGC 1051
||||||||||||| || || || || ||||||||||| ||||| |||||||||||||| |
Sbjct 1025 CAAAGAGAAGACATCA-TTGCGCCGTTTTAGCTGGCGATATATAATCATTGATGAAGCAC 1083
Query 1052 ATCGAATCAAGAACGAGAATTCACTCCTTTCTAAAACCATGAGACTTTTTAGCACCAATT 1111
||||||| || || ||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct 1084 ATCGAATTAAAAATGAGAATTCACTCCTTTCGAAAACCATGAGACTTTTCAGCACCAACT 1143
Query 1112 ATCGGCTTCTTATCACGGGGACCCCCCTTCAGAATAATCTCCATGAACTGTGGGCTCTTC 1171
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1144 ATCGGCTTCTTATCACGGGAACCCCCCTTCAGAATAATCTCCATGAATTGTGGGCCCTTC 1203
Query 1172 TAAATTTTCTTCTGCCTGAGATTTTTAGTTCAGCAGAGACTTTTGATGAATGGTTTCAAA 1231
| ||||||||||| |||||| |||||||||||||||| |||||||| || ||||||||||
Sbjct 1204 TCAATTTTCTTCTCCCTGAGGTTTTTAGTTCAGCAGAAACTTTTGACGAGTGGTTTCAAA 1263
Query 1232 TTTCTGGTGAGAATGACCAGCAAGAAGTTGTGCAACAACTGCACAAGGTTCTTCGACCAT 1291
|||||||||| || ||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct 1264 TTTCTGGTGAAAACGACCAGCAAGAAGTTGTTCAACAACTTCACAAGGTTCTGCGACCAT 1323
Query 1292 TTCTTCTTCGAAGACTAAAGTCAGATGTTGAGAAAGGTTTGCCACCGAAGAAGGAGACCA 1351
|||||||||| || |||| |||||||| |||||||| || || || || |||||||| |
Sbjct 1324 TTCTTCTTCGGAGGTTAAAATCAGATGTAGAGAAAGGCTTACCTCCAAAAAAGGAGACAA 1383
Query 1352 TACTTAAAGTTGGTATGTCTCAGATGCAAAAGCAATACTACAAGGCTTTACTGCAGAAGG 1411
||||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||
Sbjct 1384 TACTTAAAGTTGGCATGTCTCAAATGCAAAAACAGTACTACAAGGCTTTACTGCAGAAGG 1443
Query 1412 ATCTTGAAGCGGTTAATGCTGGTGGAGAACGCAAACGTCTGCTAAACATTGCAATGCAAC 1471
||||||||| |||||||| |||||||||||| ||||||||| | ||||| |||||||||
Sbjct 1444 ATCTTGAAGTGGTTAATGGTGGTGGAGAACGTAAACGTCTGTTGAACATAGCAATGCAAT 1503
Query 1472 TGCGTAAATGCTGCAATCACCCCTATCTCTTCCAGGGTGCAGAACCTGGTCCCCCATATA 1531
|||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct 1504 TGCGGAAATGCTGCAATCACCCTTATCTCTTCCAGGGTGCGGAGCCTGGTCCCCCATATA 1563
Query 1532 CCACAGGAGATCACCTTATAACAAATGCTGGTAAGATGGTTCTCTTGGATAAATTGCTTC 1591
||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||| |
Sbjct 1564 CCACAGGAGATCACCTTGTAACAAATGCAGGTAAGATGGTTCTCTTAGATAAATTGCTAC 1623
Query 1592 CTAAGTTGAAAGAACGTGATTCAAGGGTGCTGATATTTTCTCAGATGACAAGACTTTTGG 1651
| |||||||| || || ||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1624 CCAAGTTGAAGGATCGAGATTCAAGGGTTCTGATATTTTCTCAGATGACAAGGCTTTTGG 1683
Query 1652 ATATTCTTGAGGACTATTTAATGTATCGTGGTTACTTGTATTGCCGTATTGATGGAAACA 1711
||||||||||||| ||| |||||||||| |||||| ||| ||||||||||||||||| |
Sbjct 1684 ATATTCTTGAGGATTATCTAATGTATCGCGGTTACCAGTACTGCCGTATTGATGGAAATA 1743
Query 1712 CTGGTGGTGACGAACGAGATGCCTCCATAGAAGCCTACAACAAGCCAGGAAGTGAGAAAT 1771
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1744 CTGGTGGTGACGAACGAGATGCTTCCATAGAAGCCTACAACAAGCCAGGAAGTGAGAAAT 1803
Query 1772 TTGTTTTCTTGTTATCTACTAGAGCTGGAGGGCTTGGTATCAATCTTGCTACTGCAGATG 1831
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1804 TTGTTTTCTTGTTATCCACTAGAGCTGGAGGACTTGGTATCAATCTTGCTACTGCAGATG 1863
Query 1832 TTGTGATCCTTTACGATAGTGATTGGAACCCACAAGTCGACTTGCAAGCTCAGGATCGTG 1891
|||||||||| || |||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct 1864 TTGTGATCCTCTATGATAGTGACTGGAACCCTCAAGTTGACTTGCAAGCTCAGGATCGTG 1923
Query 1892 CCCATAGGATTGGTCaaaaaaaaGAAGTTCAAGTGTTTCGATTCTGCACTGAGTCTGCTA 1951
| |||||||||||||||||||||||||||||||| || || |||||||| ||| |||||
Sbjct 1924 CACATAGGATTGGTCAAAAAAAAGAAGTTCAAGTATTCCGGTTCTGCACCGAGAATGCTA 1983
Query 1952 TTGAGGAGAAAGTGATTGAAAGAGCTTACAAGAAGTTAGCACTTGATGCTCTGGTTATTC 2011
|||||| |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1984 TTGAGGCGAAAGTCATTGAGAGAGCTTACAAGAAGTTGGCACTTGATGCTCTGGTTATTC 2043
Query 2012 AACAAGGGAGATTGGCAGAACAGAAAACTGTCAATAAGGATGAGTTGCTTCAAATGGTAA 2071
| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 2044 AGCAAGGGCGATTGGCAGAACAGAAAACTGTTAATAAGGATGAGTTGCTTCAAATGGTGA 2103
Query 2072 GATATGGTGCTGAGATGGTGTTCAGTTCTAAAGATAGCACAATCACAGACGAGGATATTG 2131
||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct 2104 GATATGGTGCTGAAATGGTGTTTAGTTCTAAAGATAGCACAATTACAGATGAGGATATTG 2163
Query 2132 ATAGAATCATTGCCAAAGGAGAAGAGGCAACAGCTGAACTTGATGCTAAGATGAAGAAAT 2191
| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 2164 ACAGAATCATTGCCAAAGGAGAAGAGGCAACGGCTGAACTTGATGCCAAGATGAAGAAAT 2223
Query 2192 TCACAGAAGATGCTATACAGTTTAAAATGGATGACAGTAAGGGTGCTGACTTCTATGATT 2251
|||| |||||||| |||||||||||||||||||||||| | ||||||| |||||||
Sbjct 2224 TCACTGAAGATGCAATACAGTTTAAAATGGATGACAGT--G----CTGACTTTTATGATT 2277
Query 2252 TTGATGATGACAATAAGGATGAAAACAAGCTCGATTTTAAAAAGATTGTAAGCGACAATT 2311
|||| ||||||||||||||||| | |||| | ||||||||||||||||| || || ||||
Sbjct 2278 TTGAAGATGACAATAAGGATGAGAGCAAGGTGGATTTTAAAAAGATTGTGAGTGAAAATT 2337
Query 2312 GGAATGATCCCCCCAAGCGGGAGAGAAAGCGCAACTACTCTGAATCTGAGTACTTTAAGC 2371
|||||||||| || || | |||||||||||||||||||||||| |||| ||||| ||||
Sbjct 2338 GGAATGATCCACCAAAAAGAGAGAGAAAGCGCAACTACTCTGAAACTGAATACTTCAAGC 2397
Query 2372 AAACATTGCGGCAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCGCGCATGCCCC 2431
||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2398 AAACACTGCGACAAGGTGCTCCAGCTAAACCTAAAGAGCCTAGAATTCCACGCATGCCCC 2457
Query 2432 AGTTGCACGATTTCCAGTTCTTTAACATTCAGAGATTGACCGAGTTGTATGAAAAGGAAG 2491
| ||||| ||||| |||||||||||||||||||| ||||| ||| |||| ||||| ||||
Sbjct 2458 AATTGCATGATTTTCAGTTCTTTAACATTCAGAGGTTGACTGAGCTGTACGAAAAAGAAG 2517
Query 2492 TACGTTATC-TCATGCAAACACATCAGAAAAATCAGTTGAAAGACACAATTGATGTTGAA 2550
| || | || | |||||| |||||||||||| ||| |||||||||||||||| |||||
Sbjct 2518 TGCGCT-TCCTTATGCAAGCACATCAGAAAACTCAAATGAAAGACACAATTGACGTTGAT 2576
Query 2551 GAACCAGAAGG--TG-G-GGATCCCTTA--A-CTACTGAAG-AAGTAG--AAGA-AAAGG 2599
||||| |||| | | ||| | | ||| || | ||| || ||| |||
Sbjct 2577 GAACCTGAAGAAATAAGCGGAAGAAA-AGGAGCTATTGCTGGAAG-AGGCAAGCGAAACC 2634
Query 2600 AGG-GA--TTATTGGAGGAGGGTTTCTCAACATGGAGCAGAAGAGATTTTAATACTTTCC 2656
| || ||| || || || |||||||||||||||||||||||| || ||| | |||
Sbjct 2635 ATTTGACCTTACTGT-GG-GG-TTTCTCAACATGGAGCAGAAGAGACTTCAATGCCTTCA 2691
Query 2657 TCAGGGCTTGTGAGAAGTATGGCCGCAACGACATAAAAAGCATTGCCTCTGAGATGGAAG 2716
| ||||||||||||||||||||||| || |||||||| || |||||||||||||||||||
Sbjct 2692 TTAGGGCTTGTGAGAAGTATGGCCGGAATGACATAAAGAGTATTGCCTCTGAGATGGAAG 2751
Query 2717 GGAAAACAGAGGAAGAAGTTGAAAGATATGC-CAAAGTATTTA-AAGAGCGGTACAAGGA 2774
||||||| |||||||| |||||| ||||||| ||| || ||| ||||||| || || ||
Sbjct 2752 GGAAAACTGAGGAAGAGGTTGAACGATATGCTCAA-GT-TTTCCAAGAGCGATATAAAGA 2809
Query 2775 GCTGAACGACTATGATAGAATCATTAAGAACATTGAGAGGGGAGAGGCAAGGATCTCTAG 2834
||||||||| || || |||||||| ||||| ||||||||||| || ||||| ||||||||
Sbjct 2810 GCTGAACGATTACGACAGAATCATCAAGAATATTGAGAGGGGGGAAGCAAGAATCTCTAG 2869
Query 2835 GAAAGACGAAATCATGAAGGCCATAGGGAAGAAACTGGATCGCTACAGAAACCCTTGGCT 2894
|||||| ||||||||||| || || ||||||||||||||||||||||||||||| |||||
Sbjct 2870 GAAAGATGAAATCATGAAAGCTATTGGGAAGAAACTGGATCGCTACAGAAACCCGTGGCT 2929
Query 2895 GGAACTGAAGATTCAATATGGTCAGAACAAAGGCAAGCTGTACAATGAAGAGTGTGACCG 2954
||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 2930 GGAACTGAAGATTCAGTATGGTCAGAACAAAGGGAAGCTGTACAATGAAGAGTGCGACCG 2989
Query 2955 TTTCATGATCTGCATGATTCACAAACTTGGTTATGGGAATTGGGATGAGCTAAAGGCAGC 3014
||||||||| |||||| | || |||||||| ||||| || ||||||||||||||||||||
Sbjct 2990 TTTCATGATATGCATGGTCCATAAACTTGGGTATGGAAACTGGGATGAGCTAAAGGCAGC 3049
Query 3015 ATTTAGGACATCGTC-TGTGTTCAGGTTTGACTGGTTTGTGAAATCCCGCACGAGTCAGG 3073
||| ||||||| | | |||||||||||||||||||||| ||||||||||| | |||||
Sbjct 3050 GTTTCGGACATCCCCCT-TGTTCAGGTTTGACTGGTTTGTAAAATCCCGCACAACTCAGG 3108
Query 3074 AACTTGCAAGAAGATGCGACACTCTGATTC-GACTGATCGAGAAAGAGAACCAGGAGTTT 3132
|||||||||| ||||| ||||| || || | | |||| ||||||||||| || || | |
Sbjct 3109 AACTTGCAAGGAGATGTGACACACTAAT-CAGGTTGATTGAGAAAGAGAATCAAGAATAT 3167
Query 3133 GATGAAAGAGAGAGGCAAGCCCGCAAAGAGAAGAAGCTCGCGAAGAGTGCAACACCATCA 3192
||||| ||||||||||||||||| |||||||||||||| || |||| |||||| ||||||
Sbjct 3168 GATGAGAGAGAGAGGCAAGCCCGAAAAGAGAAGAAGCTTGCAAAGAATGCAACGCCATCA 3227
Query 3193 AAGCGACCTT-TAGGAAGACAAGCAAGTGAGAGTCCTTCATCGA--C-GAAGAAGCGGAA 3248
|||||||||| | || || ||||||| |||||| |||||||| | |||||| || ||
Sbjct 3228 AAGCGACCTTCT-GGTAGGCAAGCAAATGAGAGCCCTTCATCTCTTCTGAAGAAACGAAA 3286
Query 3249 GCACCTGTCGATGAGATGAGATTATGTG 3276
||| ||||| ||| ||||| |||||||
Sbjct 3287 GCAGCTGTCAATG-GATGA--TTATGTG 3311
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 130347187525
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5