BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G07510.1 Length=898 Score E Sequences producing significant alignments: (Bits) Value Ahg478070 jgi|Araly1|478070|fgenesh2_kg.3__771__AT3G07510.1 1448 0.0 > Ahg478070 jgi|Araly1|478070|fgenesh2_kg.3__771__AT3G07510.1 Length=892 Score = 1448 bits (784), Expect = 0.0 Identities = 857/892 (96%), Gaps = 6/892 (1%) Strand=Plus/Plus Query 8 TTTCCGACAAGCTCTCTCTTTAAGACAATCCATCTCTTTCTTCAAGCTAAGCCCCGACGG 67 ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| Sbjct 2 TTTCCGACAAGCTCTCTTTTTAAGACAATCAATCTCTTTCTTCAAACTAAGCCCCGACCA 61 Query 68 AAAGCTAAACTCATTGCTTAAATAGATTCCCTCATATCTGAGCCGAAGGTTAACTACATG 127 |||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 62 AAAGCT-AACACATTGCTTAATTAGATTCCCTCATATCTGAGCCGAAGGTTAACTACATG 120 Query 128 ACCGGCGCTGAGAACGGCGTGAGAATGACGTCACCAGAGGCGTCTTCAACATCCTCCCTC 187 ||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 121 ACCGGCGTTGAAAACGGCGTGAGAATGACGTCACCAGAGACGTCTTCAACATCCTCCCTC 180 Query 188 GCCACCACAAGTGTCCACGTAAGCGCTCTCGACGGACTCGTGAACGTGAACTCTCTCTTC 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GCCACCACAAGTGTCCACGTAAGCGCTCTCGACGGACTCGTGAACGTGAACTCTCTCTTC 240 Query 248 ACCATCGCCGTCTTCGTTGGTCTTTCCTTAGCGACTCCAGGACAACACAGCCTCGAACAA 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ACCATCGCCGTCTTCGTTGGTCTTTCCTTAGCGACTCCAGGACAACACAGCCTCGAACAA 300 Query 308 CGATCCAGCTGCGACGCAAGTGCTGACGTCGCCAAGAAGCTACTGGTCTTCGAAGTCGTC 367 |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 301 CGATCCAGCTGCGATGCAAGTGCTGACGTGGCCAAGAAGCTACTCGTCTTCGAAGTCGTC 360 Query 368 TCCTTCAGCTTCTTCCTCTTCTCCTCTCTTGTAGCTCAGGGTCTTAAGCTTGCCTTAAAC 427 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 361 TCCTTCAGCTTCTTCCTCTTCTCCTCTCTCGTAGCTCAGGGTCTTAAGCTTGCCTTAAAC 420 Query 428 CTTCTTAATAGCAAAGACGTCAACGAGATTTTCAGAGCTCACATCAATATCAAGGTTTTG 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CTTCTTAATAGCAAAGACGTCAACGAGATTTTCAGAGCTCACATCAATATCAAGGTTTTG 480 Query 488 AGATGGGGAATGATGGCTTCTGCTGTCGGATCTGTAATGGGCTGTCTCTTCTTGATGCTC 547 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 481 AGATGGGGAATGATGGCTTCTGCTGTCGGATCTGTCATGGGCTGTCTCTTCTTGATGCTC 540 Query 548 TCTATGGTTAATGTGATTCAGATCCGTCTTGGTTTGCTCTCTTGCGGCAGCAAATCGGCG 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TCTATGGTTAATGTGATTCAGATCCGTCTTGGTTTGCTCTCTTGCGGCAGCAAATCGGCG 600 Query 608 GCTCAAGCTGTTGCAACGCTCGTCACTCTGGTTTCCTCTGCTCTGCTGATTTACATCTCT 667 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GCTCAAGCGGTTGCAACGCTCGTCACTCTGGTTTCCTCTGCTCTGCTGATTTACATCTCT 660 Query 668 ACCGCCATTTACGCTTTCTGGCATTGAT---GCTATGTCAAAATTGGATAATGTCCATGG 724 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 661 ACCGCCATTTACGCTTTCTGGCATTGATACTGCTCTGTCAAAATTGGATAATGTCCATGG 720 Query 725 CTTTGTTTTGATTAGCCAATGTGTAATTTCATCATCAATGCCTTCCAATCTAGtttt-tt 783 |||| ||||||||||||| ||||||||||||||||||||||||| |||||| ||||| || Sbjct 721 CTTTATTTTGATTAGCCAGTGTGTAATTTCATCATCAATGCCTTTCAATCTTGTTTTCTT 780 Query 784 gtttttttGTTTCGGAGAATGAAGAATCAATCACAAGATACAGAA-CATTGGATTATGAG 842 ||| ||||||||||||||||||||||||||||||||| | | || |||||||||| || Sbjct 781 CTTTGTTTGTTTCGGAGAATGAAGAATCAATCACAAGAGAAAAAAACATTGGATTAAGAA 840 Query 843 AATTTGATGTTAAGCTTTTATGAACAGAAATGAAGCATTATGTTTGTTGTTT 894 |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 841 AATTTGATGTTAAGCTTTTATGAACAGAAATGAAGCATTATGTTTGCTGTTT 892 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33281306541 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5