BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G07850.1
Length=1691
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478122 jgi|Araly1|478122|fgenesh2_kg.3__823__AT3G07850.1 2398 0.0
Ahg497387 jgi|Araly1|497387|fgenesh2_kg.286__2__AT3G07850.1 2250 0.0
Ahg318190 jgi|Araly1|318190|fgenesh1_pm.C_scaffold_3001206 1936 0.0
> Ahg478122 jgi|Araly1|478122|fgenesh2_kg.3__823__AT3G07850.1
Length=1675
Score = 2398 bits (1298), Expect = 0.0
Identities = 1563/1685 (93%), Gaps = 41/1685 (2%)
Strand=Plus/Plus
Query 33 aataaaca-aaagaagaaaaa-aa-actaataaaacaaaatcaataaaaaga-gaataaa 88
|||||||| ||| || ||||| || | ||| |||||||| || ||||| | ||||||
Sbjct 5 AATAAACACAAA-AACAAAAAGAAGA-GAAT-AAACAAAA-GAAAAAAAAAATCAATAAA 60
Query 89 aaatGGTGGGTTCTCACAA-AGCAAGCGGAGTGCTTCTTGTGCTACTAGTGGTTATGGCC 147
|||||||||||| || || |||||||||||||||||| ||||| |||||||||||||||
Sbjct 61 AAATGGTGGGTTTTC-GAAGAGCAAGCGGAGTGCTTCTAGTGCTTCTAGTGGTTATGGCC 119
Query 148 ACCACAATAGCAAACGGGACACCGGTTGTCGATAAAGCAAAAAATGCAGCT-ACAGCAGT 206
||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct 120 ACCACAATAGCAAACGGGACACCGGTTGTCGATAAAGCAAAAAATGCAGCTGA-ATCAGT 178
Query 207 TGAAGATACAG-CAAAAAATGCAGCTACAGCAGTTGGC------G-----G-TGCAGCTG 253
|| |||| || || || ||||||||| |||||||| | | ||||||||
Sbjct 179 TGGTGATAAAGTCAGTGAA-GCAGCTACAACAGTTGGCGATAAAGCAAAAGATGCAGCTG 237
Query 254 CATCAGTTGGTGCTAAAGTATCAGGTGCCAAACCAGGC---GCAGCAGTTGATGTTAAAG 310
|||||||||| ||||||||| |||| |||||| ||||| ||| || ||||||||||||
Sbjct 238 CATCAGTTGGCGCTAAAGTACCAGGAGCCAAAGCAGGCGGTGCATCACTTGATGTTAAAG 297
Query 311 CATCAGGAGCCAAAGGAGACAGCAAAACTGATGATAGTGCGGCATTTGCGGCTGCATGGA 370
||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||
Sbjct 298 CATCAGGAGCCAAAGGAGATGGCAAAACTGATGACAGTGCGGCATTTATGGCTGCATGGA 357
Query 371 AAGAAGCTTGTGCAGCAGGGAGCACAATTACAGTGCCAAAAGGTGAGTATATGGTAGAGA 430
||||||| ||||||||||||||||| ||||||||||| |||||||||||| |||||||||
Sbjct 358 AAGAAGCGTGTGCAGCAGGGAGCACGATTACAGTGCCCAAAGGTGAGTATTTGGTAGAGA 417
Query 431 GCCTAGAGTTCAAAGGTCCATGCAAAGGTCCAGTCACTTTGGAATTGAATGGCAATTTCA 490
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 418 GCCTAGAGTTTAAAGGTCCATGCAAAGGTCCAGTCACTTTGGAATTGAATGGCAATCTAA 477
Query 491 AGGCTCCGGCTACGGTCAAGACCACTAAGCCACATGCCGGATGGATTGATTTCGAAAATA 550
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 478 AGGCTCCGGCTACGGTCAAGACCACTAAACCTCATGCCGGATGGATTGATTTCGAAAATC 537
Query 551 TAGCTGATTTCACTTTGAATGGAAACAAAGCTATTTTTGACGGTCAAGGGTCCCTCGCTT 610
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 538 TCGCTGATTTCACTTTGAATGGAAACAAAGCTATATTTGACGGTCAAGGGTCCCTCGCTT 597
Query 611 GGAAGGCCAATGATTGTGCCAAAACTGGCAAATGCAACTCTCTCCCTATCAACATCCGAT 670
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 598 GGAAGGCCAATGATTGTGCCAAAACTGGCAAATGCAACTCTCTCCCCATCAACATCCGAT 657
Query 671 TCACTGGTCTAACAAACTC-AAAGATTAATAGTATTACATCAACAAACAGCAAACTTTTC 729
|||| |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct 658 TCACGGGTCTAACAAACTCGAAA-ATTAAGAGTATTACATCAACAAACAGCAAACTTTTC 716
Query 730 CACATGAACATCCTTAACTGCAAGAACATTACTCTTTCGGATATTGGTATTGATGCACCT 789
||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||
Sbjct 717 CACATGAACATCCTTAACTGCAAAAACATAACTCTTGAGGATATTGGTATTGATGCACCT 776
Query 790 CCGGAGAGTCTCAACACCGATGGTATCCACATCGGAAGGTCCAATGGAGTCAACTTAATT 849
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 777 CCGGAGAGTCTCAACACCGATGGTATCCACATCGGAAGGTCCAATGGCGTCAACTTAATA 836
Query 850 GGGGCAAAGATCAAAACCGGAGATGACTGCGTTTCCATTGGAGATGGTACCGAAAATCTC 909
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 GGGGCAAAGATTAAAACCGGAGATGACTGCGTTTCCATTGGAGATGGTACCGAAAATCTC 896
Query 910 ATTGTTGAGAACGTAGAATGTGGACCAGGACACGGAATTTCCATTGGAAGTCTTGGAAGA 969
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 ATTGTCGAGAACGTAGAATGTGGACCAGGACACGGAATTTCCATTGGAAGTCTTGGAAGA 956
Query 970 TACCCTAATGAGCAACCAGTAAAAGGAGTCACCGTGAGGAAATGCCTCATCAAGAACACT 1029
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 957 TACCCTAACGAGCAACCAGTAAAAGGAGTCACCGTGAGGAAATGCCTCATCAAGAACACT 1016
Query 1030 GACAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCCCGGCATCGCCTCCAACATT 1089
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1017 GATAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCCCGGTATCGCCTCCAACATT 1076
Query 1090 CTTTTCGAAGATATCACAATGGACAATGTTAGC-CTTCCCGTTCTCATCGACCAAGAGTA 1148
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1077 CTTTTCGAAGATATCACAATGGACAATGTTAGCAC-CCCCGTTCTCATCGACCAAGAGTA 1135
Query 1149 CTGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGCAAGTGAAGTTGTCAGACGTGAC 1208
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 1136 CTGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGAAAGTGAAGTTGTCGGACGTGAC 1195
Query 1209 TATCAAGGGCATTAAGGGTACATCAGCAACAAAGGTGGCTGTGAAGCTAATGTGCAGCAA 1268
||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 TATCAAGAACATTAAGGGGACATCAGCAACAAAGGTGGCTGTGAAGCTAATGTGCAGCAA 1255
Query 1269 AGGAGTGCCTTGCACCAATATTGCTCTCTCTGACATCAACTTGGTCCACAACGGCAAAGA 1328
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1256 AGGAGTGCCTTGCACCAATATTGCTCTTTCTGACATCAACTTGGTCCACAACGGCAAAGA 1315
Query 1329 GGGACCAGCTGTCTCGGCATGTTCTAACATCAAGCCTATTCTCAGCGGAAAGTTGGTTCC 1388
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 1316 GGGACCAGCTGTCTCGGCATGTTCTAACATCAAGCCTATTCTCTCCGGCAAGTTGGTTCC 1375
Query 1389 AGCGGCTTGCACTGAAGTTGCTAAACCGGGTCCATAAATTAAAGTCGCTTGTCCACCATA 1448
||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1376 AGCAGCTTGCACTGAAGTCGCTAAACCGGGTCCTTAAATTAAAGTCGCTTGTCCACCATA 1435
Query 1449 AATCCATCCAATCTGGTGAAGACGCTTTGATTAGGGTGCGATGAAAAAA-TTTTGCAATA 1507
|||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1436 AATCCATCCAATCTCGTGAAGACGCTTTGATTAGGGTGCGATAAAAAAAGTTTTGCAATA 1495
Query 1508 tttttttGACATATAAATTATATGGATATTTTA-TAGATAAGACGGAGTCCATTCAGGAT 1566
||||||||||||||||| ||||||||||||| | ||||||| ||||||||| |||||| |
Sbjct 1496 TTTTTTTGACATATAAAATATATGGATATTT-AGTAGATAAAACGGAGTCCCTTCAGGCT 1554
Query 1567 TGGAGTTTATAACCTGAAGAGTGACTCGTGAATTGGGTAGTAATTGTTGTGTGGATTCGC 1626
|||||||||| |||||||||||||||||||| |||||||||||| |||||||| |||||
Sbjct 1555 TGGAGTTTATCACCTGAAGAGTGACTCGTGA-TTGGGTAGTAATCGTTGTGTGC-TTCGC 1612
Query 1627 ATTTATGCGAGAATGTTTTAATAATTATTCGA-AAAGTAATAATATCATTGAAATTTTGA 1685
| | |||||||| ||||||||||||||||| | ||| ||||||||||||||||||||| |
Sbjct 1613 AAT-ATGCGAGAGTGTTTTAATAATTATTCAATAAA-TAATAATATCATTGAAATTTTTA 1670
Query 1686 AGTTT 1690
|||||
Sbjct 1671 AGTTT 1675
> Ahg497387 jgi|Araly1|497387|fgenesh2_kg.286__2__AT3G07850.1
Length=1551
Score = 2250 bits (1218), Expect = 0.0
Identities = 1446/1553 (93%), Gaps = 28/1553 (2%)
Strand=Plus/Plus
Query 1 CATCAATaaacacaaaaacaaaagaagaagagaataaacaaaagaagaaaaa-aaactaa 59
||||||||||||||||||| || ||||||||||||||||||| || ||||| ||| | |
Sbjct 1 CATCAATAAACACAAAAAC--AA-AAGAAGAGAATAAACAAAA-AA-AAAAATAAAAT-A 54
Query 60 taaaacaaaatcaataaaaagagaataa-aaaatGGTGGGTTCTCACAAAGCAAGCGGAG 118
|||||||||||||||||| |||||||| ||||||||||||| || || |||||||||||
Sbjct 55 -AAAACAAAATCAATAAAAGGAGAATAAGAAAATGGTGGGTTTTCGCAGAGCAAGCGGAG 113
Query 119 TGCTTCTTGTGCTACTAGTGGTTATGGCCACCACAATAGCAAACGGGACACCGGTTGTCG 178
||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 114 TGCTTCTTGTGGTATTAGTGGTTATGGCCACCACAATAGTAAACGGGACACCGGTTGTCG 173
Query 179 ATAAAGCAAAAAATGCAGCTA-CAGCAGTTGAAGATACAG-CAAAAAATGCAGCTACAGC 236
||||||||||| ||||||| | | |||||| |||| || || || ||||||||| |
Sbjct 174 ATAAAGCAAAAGATGCAGC-AGAATCAGTTGGTGATAAAGTCAGTGAA-GCAGCTACAAC 231
Query 237 AGTTGGCGGTGCAGCTGCATCAGTTGGTGCTAAAGTATCAGGTGCCAAACCAGGC---GC 293
|||||||| |||||||||||||||||||| ||||||| |||| |||||| ||||| ||
Sbjct 232 AGTTGGCGATGCAGCTGCATCAGTTGGTGTTAAAGTACCAGGAGCCAAAGCAGGCGGTGC 291
Query 294 AGCAGTTGATGTTAAAGCATCAGGAGCCAAAGGAGACAGCAAAACTGATGATAGTGCGGC 353
| || |||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||
Sbjct 292 ATCACTTGATGTTAAAGCATCCGGAGCTAAAGGAGATGGCAAAACTGATGACAGTGCGGC 351
Query 354 ATTTGCGGCTGCATGGAAAGAAGCTTGTGCAGCAGGGAGCACAATTACAGTGCCAAAAGG 413
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 352 ATTTGCGGCTGCATGGAAAGAAGCTTGTGCAGCAGGGAGCACGATTACAGTGCCCAAAGG 411
Query 414 TGAGTATATGGTAGAGAGCCTAGAGTTCAAAGGTCCATGCAAAGGTCCAGTCACTTTGGA 473
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 412 TGAGTATTTGGTAGAGAGCCTAGAGTTCAAAGGTCCATGCAAAGGTCCAGTCACTTTGGA 471
Query 474 ATTGAATGGCAAT-TTCAAGGCTCCGGCTACGGTCAAGACCACTAAGCCACATGCCGGAT 532
||||||||||||| || |||||||||||||||||||||||| |||| || ||| ||||||
Sbjct 472 ATTGAATGGCAATCTT-AAGGCTCCGGCTACGGTCAAGACCTCTAAACCTCATTCCGGAT 530
Query 533 GGATTGATTTCGAAAATATAGCTGATTTCACTTTGAATGGAAACAAAGCTATTTTTGACG 592
|||||||||||||||| || |||||||||||||||||||||||| ||| ||||||||||
Sbjct 531 GGATTGATTTCGAAAACATCGCTGATTTCACTTTGAATGGAAACGGAGCCATTTTTGACG 590
Query 593 GTCAAGGGTCCCTCGCTTGGAAGGCCAATGATTGTGCCAAAACTGGCAAATGCAACTCTC 652
||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct 591 GTCAAGGTTCCCTCGCTTGGAAGGCCAATGACTGCGCCAAAACCGGCAAATGCAACTCTC 650
Query 653 TCCCTATCAACATCCGATTCACTGGTCTAACAAACTC-AAAGATTAATAGTATTACATCA 711
|||| ||||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||
Sbjct 651 TCCCCATCAACATCCGATTCACGGGTCTAACAAACTCGAAA-ATTAAGAGTATTACATCA 709
Query 712 ACAAACAGCAAACTTTTCCACATGAACATCCTTAACTGCAAGAACATTACTCTTTCGGAT 771
||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||
Sbjct 710 ACAAACAGCAAACTTTTCCACATGAACATCCTTAACTGCAAAAACATAACTCTTGAGGAT 769
Query 772 ATTGGTATTGATGCACCTCCGGAGAGTCTCAACACCGATGGTATCCACATCGGAAGGTCC 831
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 770 ATTGGTATTGATGCACCTCCGGAGAGTCTCAACACCGATGGGATCCACATCGGAAGGTCC 829
Query 832 AATGGAGTCAACTTAATT-GGGGCAAAGATCAAAACCGGAGATGACTGCGTTTCCATTGG 890
||||| |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 830 AATGGCGTCAACTT-ATTAGGGGCAAAGATTAAAACCGGAGATGACTGCGTTTCCATTGG 888
Query 891 AGATGGTACCGAAAATCTCATTGTTGAGAACGTAGAATGTGGACCAGGACACGGAATTTC 950
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 889 AGATGGTACCGAAAATCTCATTGTTGAGAACGTAGAATGTGGACCGGGACACGGAATTTC 948
Query 951 CATTGGAAGTCTTGGAAGATACCCTAATGAGCAACCAGTAAAAGGAGTCACCGTGAGGAA 1010
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 949 CATTGGAAGTCTCGGAAGATACCCTAATGAGCAACCAGTAAAAGGAGTCACTGTGAGGAA 1008
Query 1011 ATGCCTCATCAAGAACACTGACAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCC 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009 ATGCCTCATCAAGAACACTGACAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCC 1068
Query 1071 CGGCATCGCCTCCAACATTCTTTTCGAAGATATCACAATGGACAATGTTAGC-CTTCCCG 1129
||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1069 CGGTATCGCCTCCAACATTCTTTTCGAAGATATCACAATGGACAATGTTAGCAC-CCCCG 1127
Query 1130 TTCTCATCGACCAAGAGTACTGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGCAAG 1189
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1128 TTCTCATCGACCAAGAGTACTGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGAAAG 1187
Query 1190 TGAAGTTGTCAGACGTGACTATCAAGGGCATTAAGGGTACATCAGCAACAAAGGTGGCTG 1249
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1188 TGAAGTTGTCGGACGTGACTATCAAGAACATTAAGGGTACATCAGCAACAAAGGTGGCTG 1247
Query 1250 TGAAGCTAATGTGCAGCAAAGGAGTGCCTTGCACCAATATTGCTCTCTCTGACATCAACT 1309
|||||||||||||||| ||||| || ||||||||||||||||||||| ||||||||||||
Sbjct 1248 TGAAGCTAATGTGCAGTAAAGGCGTTCCTTGCACCAATATTGCTCTCGCTGACATCAACT 1307
Query 1310 TGGTCCACAACGGCAAAGAGGGACCAGCTGTCTCGGCATGTTCTAACATCAAGCCTATTC 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1308 TGGTCCACAACGGCAAAGAGGGACCAGCTGTCTCGGCATGTTCTAACATCAAGCCTATTC 1367
Query 1370 TCAGCGGAAAGTTGGTTCCAGCGGCTTGCACTGAAGTTGCTAAACCGGGTCCATAAATTA 1429
|| ||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||
Sbjct 1368 TCTCCGGAAAGTTGGTTCCAGCGGCTTGCACTGAAGTCGCTAAAACGGGTCCTTAAATTA 1427
Query 1430 AAGTCGC-T-T--GTCCACCATAAATCCATCCAATCTGGTGAAGACGCTTTGATTAGGGT 1485
||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1428 AAGGCGCATATATGTCCACCATAAATCCATCCAATCTGGTGAAGACGCTTTGATTAGGGT 1487
Query 1486 GCGATGAAAAAATTTTGCAATAtttttttGACATATAAATTATATGGATATTT 1538
||||||| ||| ||||||||||||||||||||||| |||||||||| ||||||
Sbjct 1488 GCGATGATAAAGTTTTGCAATATTTTTTTGACATAAAAATTATATGAATATTT 1540
> Ahg318190 jgi|Araly1|318190|fgenesh1_pm.C_scaffold_3001206
Length=1350
Score = 1936 bits (1048), Expect = 0.0
Identities = 1258/1356 (93%), Gaps = 27/1356 (2%)
Strand=Plus/Plus
Query 91 atGGTGGGTTCTCACAAAGCAAGCGGAGTGCTTCTTGTGCTACTAGTGGTTATGGCCACC 150
|||||||||| || || |||||||||||||||||||||| || |||||||||||||||||
Sbjct 1 ATGGTGGGTTTTCGCAGAGCAAGCGGAGTGCTTCTTGTGGTATTAGTGGTTATGGCCACC 60
Query 151 ACAATAGCAAACGGGACACCGGTTGTCGATAAAGCAAAAAATGCAGCT-ACAGCAGTTGA 209
||||||| ||||||||||||||||||||||||||||||| |||||||| | | ||||||
Sbjct 61 ACAATAGTAAACGGGACACCGGTTGTCGATAAAGCAAAAGATGCAGCTGA-ATCAGTTGG 119
Query 210 AGATACAG-CAAAAAATGCAGCTACAGCAGTTGGCG-----G-------TGCAGCTGCAT 256
|||| || || || ||||||||| ||||||||| | |||||||||||
Sbjct 120 CGATAAAGTCAGTGAA-GCAGCTACAACAGTTGGCGATAAAGCAAAAAATGCAGCTGCAT 178
Query 257 CAGTTGGTGCTAAAGTATCAGGTGCCAAACCAGGC---GCAGCAGTTGATGTTAAAGCAT 313
||||||||| ||||||| |||| |||||| ||||| ||| || ||||| |||||||||
Sbjct 179 CAGTTGGTGTTAAAGTACCAGGAGCCAAAGCAGGCGGTGCATCACTTGATATTAAAGCAT 238
Query 314 CAGGAGCCAAAGGAGACAGCAAAACTGATGATAGTGCGGCATTTGCGGCTGCATGGAAAG 373
||||||| |||||||| | ||||||||||| ||||||||||||||||||||||||||||
Sbjct 239 CAGGAGCTAAAGGAGATGGTAAAACTGATGACAGTGCGGCATTTGCGGCTGCATGGAAAG 298
Query 374 AAGCTTGTGCAGCAGGGAGCACAATTACAGTGCCAAAAGGTGAGTATATGGTAGAGAGCC 433
|||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 299 AAGCATGTGCAGCAGGGAGCACGATTACAGTGCCAAAAGGTGAGTATTTGGTAGAGAGCC 358
Query 434 TAGAGTTCAAAGGTCCATGCAAAGGTCCAGTCACTTTGGAATTGAATGGCAAT-TTCAAG 492
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 359 TAGAGTTCAAAGGTCCATGCAAAGGTCCAGTCACTTTGGAATTGAATGGCAATCTT-AAG 417
Query 493 GCTCCGGCTACGGTCAAGACCACTAAGCCACATGCCGGATGGATTGATTTCGAAAATATA 552
||||||||||||||||||||| |||| || ||| |||||||||||||||||||||| ||
Sbjct 418 GCTCCGGCTACGGTCAAGACCTCTAAACCTCATTCCGGATGGATTGATTTCGAAAACATC 477
Query 553 GCTGATTTCACTTTGAATGGAAACAAAGCTATTTTTGACGGTCAAGGGTCCCTCGCTTGG 612
|||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||
Sbjct 478 GCTGATTTCACTTTGAATGGAAACGGAGCCATTTTTGACGGTCAAGGTTCCCTCGCTTGG 537
Query 613 AAGGCCAATGATTGTGCCAAAACTGGCAAATGCAACTCTCTCCCTATCAACATCCGATTC 672
||||||||||| || |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 538 AAGGCCAATGACTGCGCCAAAACCGGCAAATGCAACTCTCTCCCCATCAACATCCGATTC 597
Query 673 ACTGGTCTAACAAACTC-AAAGATTAATAGTATTACATCAACAAACAGCAAACTTTTCCA 731
|| |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 598 ACGGGTCTAACAAACTCGAAA-ATTAAGAGTATTACATCAACAAACAGCAAACTTTTCCA 656
Query 732 CATGAACATCCTTAACTGCAAGAACATTACTCTTTCGGATATTGGTATTGATGCACCTCC 791
||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||
Sbjct 657 CATGAACATCCTTAACTGCAAAAACATAACTCTTGAGGATATTGGTATTGATGCACCTCC 716
Query 792 GGAGAGTCTCAACACCGATGGTATCCACATCGGAAGGTCCAATGGAGTCAACTTAATT-G 850
||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |
Sbjct 717 GGAGAGTCTCAACACCGATGGGATCCACATCGGAAGGTCCAATGGCGTCAACTT-ATTAG 775
Query 851 GGGCAAAGATCAAAACCGGAGATGACTGCGTTTCCATTGGAGATGGTACCGAAAATCTCA 910
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 GGGCAAAGATTAAAACCGGAGATGACTGCGTTTCCATTGGAGATGGTACCGAAAATCTCA 835
Query 911 TTGTTGAGAACGTAGAATGTGGACCAGGACACGGAATTTCCATTGGAAGTCTTGGAAGAT 970
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 836 TTGTTGAGAACGTAGAATGTGGACCGGGACACGGAATTTCCATTGGAAGTCTCGGAAGAT 895
Query 971 ACCCTAATGAGCAACCAGTAAAAGGAGTCACCGTGAGGAAATGCCTCATCAAGAACACTG 1030
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 896 ACCCTAATGAGCAACCAGTAAAAGGAGTCACTGTGAGGAAATGCCTCATCAAGAACACTG 955
Query 1031 ACAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCCCGGCATCGCCTCCAACATTC 1090
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 956 ACAATGGTGTTCGCATCAAGACATGGCCAGGATCTCCCCCCGGTATCGCCTCCAACATTC 1015
Query 1091 TTTTCGAAGATATCACAATGGACAATGTTAGC-CTTCCCGTTCTCATCGACCAAGAGTAC 1149
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 1016 TTTTCGAAGATATCACAATGGACAATGTTAGCACC-CCCGTTCTCATCGACCAAGAGTAC 1074
Query 1150 TGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGCAAGTGAAGTTGTCAGACGTGACT 1209
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1075 TGTCCTTATGGCCACTGCAAAGCTGGGGTACCATCGAAAGTGAAGTTGTCGGACGTGACT 1134
Query 1210 ATCAAGGGCATTAAGGGTACATCAGCAACAAAGGTGGCTGTGAAGCTAATGTGCAGCAAA 1269
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1135 ATCAAGAACATTAAGGGTACATCAGCAACAAAGGTGGCTGTGAAGCTAATGTGCAGTAAA 1194
Query 1270 GGAGTGCCTTGCACCAATATTGCTCTCTCTGACATCAACTTGGTCCACAACGGCAAAGAG 1329
|| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1195 GGCGTTCCTTGCACCAATATTGCTCTCGCTGACATCAACTTGGTCCACAACGGCAAAGAG 1254
Query 1330 GGACCAGCTGTCTCGGCATGTTCTAACATCAAGCCTATTCTCAGCGGAAAGTTGGTTCCA 1389
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1255 GGACCAGCTGTCTCGGCATGTTCTAACATCAAGCCTATTCTCTCCGGAAAGTTGGTTCCA 1314
Query 1390 GCGGCTTGCACTGAAGTTGCTAAACCGGGTCCATAA 1425
||||||||||||||||| |||||| ||||||| |||
Sbjct 1315 GCGGCTTGCACTGAAGTCGCTAAAACGGGTCCTTAA 1350
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63420257925
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5