BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G08870.1 Length=2227 Score E Sequences producing significant alignments: (Bits) Value Ahg478190 jgi|Araly1|478190|fgenesh2_kg.3__891__AT3G08870.1 3192 0.0 Ahg486919 jgi|Araly1|486919|fgenesh2_kg.6__53__AT5G01560.1 778 0.0 Ahg487084 jgi|Araly1|487084|fgenesh2_kg.6__218__AT5G03140.1 52.8 1e-05 > Ahg478190 jgi|Araly1|478190|fgenesh2_kg.3__891__AT3G08870.1 Length=2152 Score = 3192 bits (1728), Expect = 0.0 Identities = 2022/2163 (93%), Gaps = 23/2163 (1%) Strand=Plus/Plus Query 1 ATGGGCATAGCAAGATCCATAAACTCGTTCATGTTCTTCTTCTTTCTAATGATATTATCA 60 |||||||||||||||||||||| |||||||||||||||| | ||| || ||| |||| Sbjct 1 ATGGGCATAGCAAGATCCATAACCTCGTTCATGTTCTTC--C--TCT--TGGTATCATCA 54 Query 61 AACGCT-TCTAA-AAGCTCTGTTCTTGCTGAGGCCACGACAGCGAAATTCACATTCATAG 118 ||| || | ||| || |||||||||||| |||||||||||||||||||||||||||||| Sbjct 55 AACTCTGT-TAACAA-TTCTGTTCTTGCTCAGGCCACGACAGCGAAATTCACATTCATAG 112 Query 119 GTTTCAAAGAAAACCAAACGGATATTCAAACAGAAGGAGCTTCCACAATCCAACACGACA 178 ||||||||| ||||||||| || |||||||||||||||||||| || ||||||| ||||| Sbjct 113 GTTTCAAAGGAAACCAAACAGAAATTCAAACAGAAGGAGCTTCGACGATCCAACTCGACA 172 Query 179 ATGATCTTCTTAGACTAACTAATCGGAAACAAAACGTCACTGGAACAGCGTTTTACCGCA 238 |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 173 ATGATCTTCTGAGACTAACTAATCGGAACCAAAACGTCACTGGAACCGCGTTTTACCGCA 232 Query 239 AACCAATCAGATTGCGTGAGTTAACCAATTCCTCCGATATCAAAGTTTGTTCCTTTAGCA 298 |||| || ||||||||||| || ||||||||||||||||||||||| ||||||||||||| Sbjct 233 AACCGATTAGATTGCGTGACTTCACCAATTCCTCCGATATCAAAGTCTGTTCCTTTAGCA 292 Query 299 CTTCTTTCGTCTTCGTCATACTCCCTTCAAGTCCCGGCAA-CGGTGGTTTTGGTTTCACG 357 |||||||||| ||||||||| |||||||||||||||| || ||||||||||||||||||| Sbjct 293 CTTCTTTCGTGTTCGTCATAATCCCTTCAAGTCCCGG-AACCGGTGGTTTTGGTTTCACG 351 Query 358 TTCACACTTTCTCCGACCCCGAATCGTCCAGGAGCCGAATCTGCACAGTATTTGGGTCTG 417 ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||| || Sbjct 352 TTCACACTTTCTCCGACCCCGAATCGTCCTGGAGCCAAATCTGCACAGTACTTGGGGCTT 411 Query 418 TTGAACAGAACCAACAACGGTAATCCATCGAATCACGTATTCGCAGTGGAATTCGACACG 477 ||||||||||||||||||||| |||||||||||||||||||||| || |||||||||| | Sbjct 412 TTGAACAGAACCAACAACGGTGATCCATCGAATCACGTATTCGCTGTTGAATTCGACATG 471 Query 478 GTACAAGGATTTAAAGACGGCGCAGACAGAAGAGGAAACCACATCGGTCTTAATTTCAAC 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 472 GTACAAGGATTTAAAGACGGCGCAGACAGAAGAGGAAACCACATCGGTCTTAATTTCAAC 531 Query 538 AACCTCTCCTCCAATGTACAAGAACCACTCATTTACTACGACACAGAGGATCGAAAGGAA 597 |||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct 532 AACCTCTCCTCCGATGTACAAGAGCCACTCATTTATTACGACACAGAGGATCGAAAAGAA 591 Query 598 GATTTTCAGCTCGAGAGCGGCGAACCAATCCGAGTTCTTATCGATTACGACGGATCCAGC 657 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 592 GATTTTCAGCTCGAGAGCGGCGAACCAATCCGAGTTCTTGTCGATTACGACGGATCCAGC 651 Query 658 GAAACCTTAAACGTTACAATCTATCCGACGAGATTAGAGTTTAAACCCAAGAAGCCTCTA 717 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| || Sbjct 652 GAAACCTTAAACGTCACAATCTATCCGACGAGATTAGAGTTTAAACCCAAAAAGCCCCTG 711 Query 718 ATCTCGCGACGAGTTTCAGAGCTGTCGGAGATTGTGAAGGATGAAATGTACGTCGGATTC 777 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 712 ATCTCGCGGCGAGTTTCAGAGCTGTCGGAGATTGTGGAGGATGAAATGTACGTCGGATTC 771 Query 778 ACCGCCGCGACTGGAAAAGACCAGTCGAGTGCTCACTATGTAATGGGTTGGAGTTTTTCA 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 772 ACCGCCGCGACTGGAAAAGACCAGTCGAGTGCTCACTATGTAATGGGTTGGAGTTTTTCA 831 Query 838 AGCTGCGGAGAAAATCCAATGGCGGATTGGCTCGAGATCTCGCGGCTTCCTCCTCCACCT 897 ||||| ||||||||||||||||||||||||||||| |||| |||||||| ||||||| Sbjct 832 AGCTGTGGAGAAAATCCAATGGCGGATTGGCTCGATCCCTCGAAGCTTCCTCTTCCACCT 891 Query 898 CGCTTGAGTAACAAGAAAGGTTACAATTCTCAAGTCATTGTTTTGATTGTTGCTTTATCG 957 |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 892 CGCTTGAGTAACAAGAAAGGTTACGATTCTCAAGTCATTGCTTTGATTGTTGCTTTATCG 951 Query 958 ATCGTCACACTGGTCTTGCTTGTGTTACTATTTATATTTGTGATGTACAAAAGGCGAATC 1017 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 952 ATCGTCACATTGGTCTTGCTTGTGTTACTGTTTATATTTGTGATGTACAAAAGGCGAATC 1011 Query 1018 CAAGAAGAAGATACTCTAGAGGATTGGGAGATTGATTATCCTCATAGGTTTAGATACAGA 1077 ||||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct 1012 CAAGAAGAAGATATTCTAGAGGACTGGGAGATTGATTATCCTCATAGATTCAGATACAGA 1071 Query 1078 GATCTCTACTTAGCAACGAAGAAATTCAAAGAGAGTGAGATTATCGGTACTGGAGGATTT 1137 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 1072 GATCTCTACTTAGCAACGAAGAAATTCAAAGAGAGTGAGATCATCGGTACCGGAGGATTT 1131 Query 1138 GGAATCGTTTACAGAGGAAATCTATCTTCTTCGGGTCCAATCGCAGTGAAGAAGATAACC 1197 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 1132 GGAATCGTTTACAGAGGAAATCTATCTTCCTCGGGTCCAATCGCAGTGAAGAAGATTACT 1191 Query 1198 TCAAATAGCTTACAAGGTGTTCGAGAATTTATGGCAGAGATCGAGAGTTTAGGAAGATTA 1257 |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1192 TCAAATAGCTTACATGGTGTTCGAGAATTTGTGGCAGAGATCGAGAGTTTAGGAAGATTA 1251 Query 1258 GGTCATAAGAACCTCGTGAATCTTCAAGGATGGTGCAAACACAAGAACGAGCTCTTGTTA 1317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1252 GGTCATAAGAACCTCGTGAATCTTCAAGGATGGTGCAAACACAAGAACGAGCTCTTGTTA 1311 Query 1318 ATTTACGATTATATACCCAACGGAAGTCTCGACTCGTTGCTGTACCAAACGCCGAGAAGA 1377 |||||||||||||| ||||||||||| || ||| || |||||||| |||||||||||||| Sbjct 1312 ATTTACGATTATATCCCCAACGGAAGCCTTGACGCGCTGCTGTACAAAACGCCGAGAAGA 1371 Query 1378 AACGGCATCGTGTTGCCGTGGGACGTGCGTTTCGAGATCATAAAGGGAATCGCGTCGGGA 1437 |||||| | |||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct 1372 AACGGCGTTGTGTTGCCGTGGGACGTGCGTTTCCAGATCATCAAGGGAATCGCGTCGGGA 1431 Query 1438 CTGTTGTACCTTCATGAGGAATGGGAACAGAT-CGTGGTTCATAGAGACGTGAAACCGAG 1496 |||||||| |||||||| ||||||||||| || | ||||||||||||| |||||| |||| Sbjct 1432 CTGTTGTATCTTCATGAAGAATGGGAACAAATTC-TGGTTCATAGAGATGTGAAAGCGAG 1490 Query 1497 CAATGTTCTTATTGATGAAGATATGAACGCTAAATTAGGCGATTTTGGACTCGCGAGGCT 1556 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1491 CAATGTTCTTATTGATGAAGATATGAACGCTAAATTAGGCGATTTTGGACTCGCTAGGCT 1550 Query 1557 TTATGAACGCGGAACGTTAACGCAGACCACGAAAATCGTTGGCACTTTAGGGTACATGGC 1616 ||| ||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 1551 TTACGAACGCGGAACCTTAACGCAGACCACGAAAGTCGTTGGGACTTTAGGGTACATGGC 1610 Query 1617 GCCTGAGCTCACACGTAACGGTAAAGGCTCAACCGCGTCTGACGTTTTCGCGTTTGGCGT 1676 ||||||||||||||||||||||||||||| || |||||||| ||||| ||||||||||| Sbjct 1611 ACCTGAGCTCACACGTAACGGTAAAGGCTCGACAGCGTCTGATGTTTTTGCGTTTGGCGT 1670 Query 1677 TTTGTTGTTAGAAATAGTGTGTGGGAATAAACCAACGAATGCAGAGAACTTCTTCTTAGC 1736 ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1671 TTTATTGTTGGAAATAGTGTGTGGGAATAAACCAACGAACGCAGAGAACTTCTTCTTAGC 1730 Query 1737 TGATTGGGTAATGGAATTTCATACTAATGGTGGAATCCTTTGCGTCGTGGATCAGAATCT 1796 ||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||| || Sbjct 1731 TGATTGGGTAATGGAGTTTCACACTAATGGTGGAATCCTTAGCGCCGTGGATCAGAAACT 1790 Query 1797 CGGGTCTAGTTTCAATGGCAGAGAGGCTAAACTAGCTCTTGTTGTGGGGTTACTATGTTG 1856 ||| |||||||| |||||||||||||||||| |||||||| ||||||| ||||| ||||| Sbjct 1791 CGGATCTAGTTTTAATGGCAGAGAGGCTAAATTAGCTCTTATTGTGGGATTACTCTGTTG 1850 Query 1857 CCATCAGAAACCAAAATTTAGGCCATCGATGAGAATGGTGCTTAGATATTTGAATGGTGA 1916 |||||||||||| | || | ||||||||||||||||||||||||||||| |||||||||| Sbjct 1851 CCATCAGAAACCGACATATCGGCCATCGATGAGAATGGTGCTTAGATATCTGAATGGTGA 1910 Query 1917 AGAGAATGTTCCACAGATTGATGAAAATTGGGGATTCTC-GGATTCTTCGAGAGACGATC 1975 ||||||||||||||||||||||| |||||||||||| || || |||||| |||||||||| Sbjct 1911 AGAGAATGTTCCACAGATTGATGGAAATTGGGGATT-TCCGGGTTCTTCAAGAGACGATC 1969 Query 1976 ATAAATCGAATGTTGTAGGTTATGTTTCGTCTGATAGAGCCTCGAGCTCGAATACTTTTT 2035 |||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1970 TTAAAACGAATGTGGTAGGTTATGTTTCGTCCGATAGAGCCTCGAGCTCGAATACTTTTT 2029 Query 2036 CGTCTTTCTCCAATGTTTCTTCAAGCTCTATCGTTAGTGGTAGATAGTTTCAT--A--GC 2091 ||||||||||| | ||||||||||||||||||||||||||||||||||||||| | || Sbjct 2030 CGTCTTTCTCCGAGGTTTCTTCAAGCTCTATCGTTAGTGGTAGATAGTTTCATTCATAGC 2089 Query 2092 ACTTTTAGCATAGCTTATTTATTTTCTAGAAACAGAACATTTTGTATGTTTTTACTATTT 2151 |||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 2090 ACTTTTAGCATAGC--ATT-ATTTTCTAGAAACAGAACATTTTGTATGTATTTACTATTT 2146 Query 2152 ATG 2154 ||| Sbjct 2147 ATG 2149 > Ahg486919 jgi|Araly1|486919|fgenesh2_kg.6__53__AT5G01560.1 Length=2299 Score = 778 bits (421), Expect = 0.0 Identities = 1180/1529 (77%), Gaps = 121/1529 (8%) Strand=Plus/Plus Query 283 GTTTGTTCCTTTAGCACTTCTTTCGTCTTCGTCATACTCCCTTCAAG-TC--CCGGCAAC 339 ||| |||||||||||||||||||||||||||| | | |||||||||| || | ||||| Sbjct 515 GTTCGTTCCTTTAGCACTTCTTTCGTCTTCGT-A-A-TCCCTTCAAGCTCAACAAGCAAC 571 Query 340 GGTGGTTTTGGTTTCACGTTCACACTTTCTCCGACCCCGAATCGTCCAGGA-GCCGAAT- 397 || |||||||| ||||| |||||||| ||||| ||||| || ||| || || || | || Sbjct 572 GGAGGTTTTGGCTTCACATTCACACTCTCTCCAACCCCAAACCGTACA-GACGCAG-ATC 629 Query 398 CTGCA-CAGTAT-TTGGGTCTGT-TGAACAG-AACCAACAACGGTAA-TCCATCGAATCA 452 | | | |||| | ||||| || | | ||| | || ||| |||| || || | | ||||| Sbjct 630 CCG-AGCAGT-TCTTGGGGCT-TCTCAAC-GAAAGAAACGACGGGAATTCAAGC-AATCA 684 Query 453 CGTATTCGCAGTGGAATTCGACACGGTACAAGGATTTAAAGACGGCGCAGA-CAGAAGAG 511 ||| || || |||||||||||||||||||||||||| |||||||| || | | ||| || Sbjct 685 CGTTTTTGCTGTGGAATTCGACACGGTACAAGGATTCAAAGACGGTACAAATC-GAATAG 743 Query 512 GAAACCACATCGGTCTTAATTTCAACAACCTCTCCTCCA-ATGTACAAGAACCACTCATT 570 | |||||||||||||| |||||||||| ||||| || | |||| |||||||| | | Sbjct 744 GCAACCACATCGGTCTAAATTTCAACAGTCTCTCTTC-AGATGTCCAAGAACCGGTGGCT 802 Query 571 TACTACGACA-CAGAGGAT---C-GAAAGGAAGATTTTCAGCTCGAGAGCGGCGAACCAA 625 || ||| ||| || | ||| | ||||| | || || || || | ||||||||| |||| Sbjct 803 TATTACAACAACA-ACGATAGTCAGAAAG-AGGAATTCCAACTGGTGAGCGGCGAGCCAA 860 Query 626 TCCGAGTTCTTATCG-ATTA-CGACGGATCCAGCG-AAAC-CTTAAACGTTACAATCTAT 681 ||| ||| ||| | | |||| | ||||| ||| | ||| ||||| | | || | || Sbjct 861 TCCAAGT-CTTCTTGGATTATC-ACGGA-CCAACCCAAATGCTTAACC-TCACTGTTTAC 916 Query 682 CCGACGAGATTAGAGTT-TAAACCCAAGAAGCCTCTA-ATCTCGCGACGAGTTTC-AGAG 738 || || ||| | | | | |||||| ||||| || || ||||| ||| ||| ||| | | Sbjct 917 CCAACCAGACTGG-GATATAAACC-AAGAATCCCCTTGATCTCACGA-GAGGTTCCAAAA 973 Query 739 CTGTCGGAGATTGTGA-AGGATGAAATGTACGTCGGATTCACCGCCGCGACTGGAA-A-A 795 ||||| || |||||| || ||||||||| |||||||||||| || |||||||| | | | Sbjct 974 CTGTCAGATATTGTGGTAG-ATGAAATGTTCGTCGGATTCACAGCAGCGACTGGGAGACA 1032 Query 796 -G-ACCAGTCGAGTGCTCACTATGTAATGGGTTGGAGTTTTTCAAGCTGCGGAGAAAATC 853 | || | ||||||||||| ||||| |||||||||||||| ||||| |||||||| ||| Sbjct 1033 CGGACAA-TCGAGTGCTCATTATGTGATGGGTTGGAGTTTCGCAAGCGGCGGAGAACATC 1091 Query 854 CAATGGCGGAT-TGGCTCGAGATCTCGCGGCTTCCTCCTCCACCTCGCT--TGAGTA-AC 909 || | || | | || ||||| |||| | ||||||||||| |||| | | || | | Sbjct 1092 CACTTGCAGCTATG-CTCGACCTCTCCCAACTTCCTCCTCCGCCTC-CAAATAAGGAGAA 1149 Query 910 -AAGAAAGGTTACAATTCTCAAG-TCATTGTTTTGATTGTTGCTTTATCGA-TCGTCACA 966 |||| ||| |||||| | ||| |||| | | |||| || |||||||||| | || | | Sbjct 1150 GAAGAGAGGCTACAATGGT-AAGGTCATCGCTCTGATCGTGGCTTTATCGACT-GTTATA 1207 Query 967 CTGG-TCTTGCTTG-TGTTACTATTTATATTTGTGATGTACAAAAGGCGAATCCAAG-AA 1023 | | || || ||| |||| | ||| | || |||||||||||| |||||| || | || Sbjct 1208 -TCGATCATG-TTGGTGTTGTTGTTTCTCTTCATGATGTACAAAAAGCGAATGCA-GCAA 1264 Query 1024 GAAGATACTCTAGAGGATTGGGAGATTGATTATCCTCATAGGTTTAGATACAGAGATCTC 1083 ||||| | |||||| |||||||| || ||| ||||||| || ||| |||||||||| ||| Sbjct 1265 GAAGAGATTCTAGAAGATTGGGAAATCGATCATCCTCACAGATTTCGATACAGAGACCTC 1324 Query 1084 TA--CTTAGCAAC-GAAGAAATTCAAAGAGAGT-GAGATTATCGGTACTGGAGGATTTGG 1139 || || || || || | | ||||| |||| | | |||| |||| || |||||||| || Sbjct 1325 TATGCT--GCTACTGATGGA-TTCAAGGAGAATCG-GATTGTCGGAACCGGAGGATTCGG 1380 Query 1140 AATCGTTTACAGAGGAAA--TCT-ATCTTCTTCGGGTC--CAA-TCGCAGTGAAGAAGAT 1193 | | |||||||||||||| ||| ||| ||||| | ||| |||||||||||||||| Sbjct 1381 AGTTGTTTACAGAGGAAACATCTCATCATCTTCCTCTGAACAAATCGCAGTGAAGAAGAT 1440 Query 1194 AACCTCA-AATAGCTTACAAGGTGTTCGAGAATTTATGGCAGAGATCGAGAGTTTAGGAA 1252 ||| || |||||| | ||||||||||||||||| | |||||||| |||||||| ||| Sbjct 1441 AAC-TCCGAATAGCATGCAAGGTGTTCGAGAATTCGTCGCAGAGATAGAGAGTTTGGGAC 1499 Query 1253 GATTA-GGTCATAAGAACCTCGTGAATCTTCAAGGATGGTGCAAACACAAGAA-CGAGCT 1310 ||||| || |||||||| || ||||| || ||||||||||| ||||||| ||| ||| || Sbjct 1500 GATTAAGG-CATAAGAATCTGGTGAACCTCCAAGGATGGTGTAAACACA-GAAACGATCT 1557 Query 1311 CTTGTTAATTTACGATTATATACCCAACGGAAGTCTC-GACTCGTTGCTGTACC--AAAC 1367 |||||| |||||||||||||||||||||||||| || |||||| |||| ||| |||| Sbjct 1558 CTTGTTGATTTACGATTATATACCCAACGGAAG-CTTAGACTCGCTGCTCTACAGTAAAC 1616 Query 1368 GCCGAGAAGAAACGGCATCG-TGTTGCCGTGGGACGTGCGTTT-CGAGATCATAA-AGGG 1424 | |||||||| |||| || | ||| ||||| ||| |||||| | ||||| | ||| Sbjct 1617 -C-GAGAAGAAGCGGCG-CGGTTTTGTCGTGGAACGCGCGTTTTC-AGATCGCCAGAGG- 1671 Query 1425 AATCGCGTCGGGACTGTTGTACCTTCATGAGGAATGGGAACAGATCGTGGTTCATAGAGA 1484 ||||||||| || ||||||| || || |||||||||||| |||| ||| |||| ||||| Sbjct 1672 AATCGCGTCTGGTTTGTTGTATCTACACGAGGAATGGGAAAAGATTGTGATTCACAGAGA 1731 Query 1485 CGTGAAACCGAGCAATGTTCTT-ATTGATGAAGATATGAACGCTAAATTAGGCGATTTTG 1543 ||||||||| ||||| ||| || ||||| || ||||||||| ||| ||| || ||||| | Sbjct 1732 CGTGAAACCTAGCAACGTT-TTGATTGACGACGATATGAACCCTAGATTGGGAGATTTCG 1790 Query 1544 GACTCGCGAGGCTTTATGAACGCGGAACGTTAA-CGCAGA-CCAC-GAAAATCGTTGGCA 1600 | || ||||||||||| ||||||||| | | || ||| || |||| | | |||| |||| Sbjct 1791 GGCTAGCGAGGCTTTACGAACGCGGATC-TCAATCGC-GAACCACCGTAG-TCGTCGGCA 1847 Query 1601 CT-TTAGGGTACATGGCGCCTGAGCTCA-CACGTAACGGTAAAGGC-TCAACCGCGTCTG 1657 | || ||||| |||||||| ||||| | | || ||||| ||| | ||| | || || | Sbjct 1848 CGATT-GGGTATATGGCGCCGGAGCT-AGCCCGCAACGG-AAACTCCTCATCAGCTTCCG 1904 Query 1658 ACGTTTTCGCGTTTGGCGTTTTGTTGTTAGAAATAGTGTGTGGGA-ATAAACCAACGAA- 1715 ||||||||||||||||||||||| |||||||||| || | |||| | ||||| ||| | Sbjct 1905 ACGTTTTCGCGTTTGGCGTTTTGCTGTTAGAAATCGTCTCCGGGAGA-AAACCGACGGAC 1963 Query 1716 TGCAGAGAACTTCTTCT-TAGCTGATTGG 1743 | | | || |||||| | |||| |||||| Sbjct 1964 T-CTGGGACCTTCTT-TATAGCGGATTGG 1990 > Ahg487084 jgi|Araly1|487084|fgenesh2_kg.6__218__AT5G03140.1 Length=2411 Score = 52.8 bits (28), Expect = 1e-05 Identities = 28/28 (100%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 1528 AAATTAGGCGATTTTGGACTCGCGAGGC 1555 |||||||||||||||||||||||||||| Sbjct 1647 AAATTAGGCGATTTTGGACTCGCGAGGC 1674 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 83836629245 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5