BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G09360.1
Length=2188
Score E
Sequences producing significant alignments: (Bits) Value
Ahg317739 jgi|Araly1|317739|fgenesh1_pm.C_scaffold_3000755 2760 0.0
Ahg341076 jgi|Araly1|341076|fgenesh1_pg.C_scaffold_3000839 1657 0.0
Ahg316772 jgi|Araly1|316772|fgenesh1_pm.C_scaffold_2001805 987 0.0
Ahg918622 jgi|Araly1|918622|Al_scaffold_0357_1 893 0.0
> Ahg317739 jgi|Araly1|317739|fgenesh1_pm.C_scaffold_3000755
Length=1803
Score = 2760 bits (1494), Expect = 0.0
Identities = 1711/1816 (94%), Gaps = 14/1816 (1%)
Strand=Plus/Plus
Query 215 ATGGTATGGTGTAACCATTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 274
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTGTGGTGTAACCACTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 60
Query 275 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAATTTCCATTTTTCTACCGAAGTTACA 334
||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||
Sbjct 61 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAACTTCAATTTTTCTACAGAAGTTACA 120
Query 335 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCATCAGGTAACATAGTGAGGAGTGTTCAA 394
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 121 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCCTCAGGTAACATAGTGAGCAGTGTTCAA 180
Query 395 AGTGGGATTACAAGCTCACGTGAAAGGAGATTTAGAATAGCTAGAGATGAGCTTATGAAT 454
||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct 181 AGTGGGATTCCAAGCTCACGTGAAAGGAGATATAGAATAGCTAGAGATGAGTTTACGAAT 240
Query 455 TTGAAAGATGCATTGGGGATTGGTGATGAGAGAGATGATGTGATTGTCATCGCAGCTAAA 514
|||| |||||||||||| |||||||||||||||| ||||||||||| ||| || | | |
Sbjct 241 TTGAGAGATGCATTGGGAATTGGTGATGAGAGAGCTGATGTGATTGACATGGCTGTTCTA 300
Query 515 TTCTTTGAAAT-GGCAGTTGAGCAGAATTTCACGAAAGGCCGCAGAACTGAACTAGTACA 573
|||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 301 TTCTTT-AAATCGGCAGTTGAGCAGAATTTCACTAAAGGCCGCAGAACTGAACTAGTACA 359
Query 574 GGCTTCCTGCCTCTACTTGACGTGCAGGGAATTGAACATTGCGTTGCTTCTTATTGATTT 633
||||||||| ||||||||||| ||||||||||||||| || |||| ||||||||||||||
Sbjct 360 GGCTTCCTGTCTCTACTTGACTTGCAGGGAATTGAACGTTCCGTTTCTTCTTATTGATTT 419
Query 634 CTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTATACTTACAACTCTGTGA 693
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 420 CTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAACTCTGTGA 479
Query 694 AATGCTGTACCTTGTGGAAAATCGGAATTATGAAAAGCTTGTTGATCCTTCAATTTTCAT 753
|||||||||| ||| ||| |||| |||||||||||||||||||| ||||||||||||||
Sbjct 480 AATGCTGTACATTGCGGATAATCAAAATTATGAAAAGCTTGTTGACCCTTCAATTTTCAT 539
Query 754 GGATCGATTCTCAAACAGCTTATTGAAAGGAAAAAATAATAAAGATGTTGTGGCAACAGC 813
|||||||||||||||| |||||||||||||| | ||||||||| ||||||| ||||||
Sbjct 540 CGATCGATTCTCAAACATCTTATTGAAAGGAACACATAATAAAGCTGTTGTGAAAACAGC 599
Query 814 TAGAGACATTATAGCTAGTATGAAGAGAGATTGGATACAGACCGGCCGGAAGCCTAGTGG 873
|| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 600 TATAGCCATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCCGGAAGCCTAGTGG 659
Query 874 AATATGTGGAGCAGCACTTTACACAGCTGCTCTTTCTCATGGTATCAAGTGCTCTAAGAC 933
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 660 AATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCAAGTGCTCTAAGTC 719
Query 934 AGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTCACCAAACGATTGATTGAGTT 993
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 720 AGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTAACCAAACGATTGATTGAGTT 779
Query 994 TGGCGATACGGATTCTGGAAATTTAAATGTTAATGAGCTCAGAGAAAGAGAATCGCATAA 1053
||| ||||||| |||||||||||||||||| ||||| ||| |||||||||||| |||||
Sbjct 780 TGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAGATCACAGAAAGAGAATCTCATAA 839
Query 1054 AAGATCTTTTACCATGAAACCAACCTCAAATAAAGAGGCGGTGCTCTGTATGCATCAGGA 1113
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 840 AAGATCTTCTACCATGAAACCAACCTCAAACAAAGAGGCGGTGCTCTGTATGCATCAGGA 899
Query 1114 TAGTAAACCTTTTGGTTATGGACTATGTGAAGACTGCTACAAAGATTTCATAAATGTTTC 1173
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 900 TAGTAAACCTTTTGGTTATGGACTATGTAAAGACTGCTACGAAGATTTCATAAATGTTTC 959
Query 1174 TGGTGGACTTGTTGGTGGGTCCAATCCTCCTGCTTTCCAGCGCGCAGAGAAAGAGCGAAT 1233
|||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct 960 TGGTGGACTTGTTGGTGGGTCCGACCCTCCTGCTTTCCAGCGCGCAGAGAATGAGCGAAT 1019
Query 1234 GGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTAGTAGCCTAAACCACGATGAACA 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 GGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTAGTAGCCTAAACCACGATGAACA 1079
Query 1294 ACTATATTCAGACTATTGCAGTATGAGCAAAAGGGGAAAACAATGTTCTGAGAAAGGTGA 1353
||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||
Sbjct 1080 ACTATATTCAGACTATTGCAGTATGAGCAAAAGCGAAAAACAATTTTCTGAGAAAGGTGA 1139
Query 1354 AAAAGATAAAGATGGGGCTGAAGAACATGCTGATACTTCGGATGAATCAGACAACTTTTC 1413
|||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1140 AAAAAATAAAGATGGGGATGAAGAACATGCTGATACTTCGGATGAATCTGACAACTTTTC 1199
Query 1414 TGACATCAGTGATGATGAGGTAAATGGCTATATCAACAACGAGGAGGAAACGCACTATAA 1473
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1200 TGACATCAGTGATGATGAGGTAGATGGCTATATCAACAACGAGGAGGAAACGCACTATAA 1259
Query 1474 GACGATCACATGGACAGAAATGAACAAAGATTATCTTGAGGAGCAAGCTGCTAAGGAAGC 1533
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1260 GACGATCACATGGACAGAAATGAACAAAGATTATCTTGAGGAGCAAGCCGCTAAGGAAGC 1319
Query 1534 AGCTCTGAAGGCGGCTAGTGAAGCTTTAAAAGCTAGCAACTCTAATTGCCCAGAAGATGC 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 AGCTCTGAAGGCGGCTAGTGAAGCTTTAAAAGCTAGCAACTCTAATTGCCCAGAAGATGC 1379
Query 1594 AAGAAAGGCTTTCGAAGCTGCCAAAGCTGATGCGGCAAAATCTAGAAAGGAAAAGCAACa 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 AAGAAAGGCTTTCGAAGCTGCCAAAGCTGATGCGGCAAAATCTAGAAAGGAAAAGCAACA 1439
Query 1654 aaaaaaaGCTGAGGAAGCAAAGAACGCGGCTCCTCCAGCCACAGCAGTGGAGGCGGTACG 1713
||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||| ||
Sbjct 1440 AAAAAAAGCTGAGGAAGCAAAGAACGCGGCTCCCCCAGCCACAGCAATGGAAGCGGTTCG 1499
Query 1714 CCGAACGCTTGATAAAAAGAGACTTAGTTCGGTGATCAACTACGATGTTTTGGAGTCGCT 1773
|||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||| |||
Sbjct 1500 CCGAACGCTTGAGAAAAAGAGACTAAGTTTGGTGATCAATTACGATGTTTTGGAGGAGCT 1559
Query 1774 ATTTGATACATCCGCACCTGAGAAATCACCCaagaggtcgaaaacagagacagacattga 1833
||||||||||||| || |||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 1560 ATTTGATACATCCACAGCTGAGAAATCACCCAAGAGGGCGAAAACCGAGACAGACATTGA 1619
Query 1834 gaagaagaaggaagagaacaaggaaatgaagagtaatgaacatgagaatggtgaaaatga 1893
|||||||||||||| ||||||| |||||||||||||| |||||||||||
Sbjct 1620 GAAGAAGAAGGAAG------------TGAAGAGCAATGAACATGAGAAAGGTGAAAATGA 1667
Query 1894 agatgaagatgaagaggatgaagaagaaggcaatgtagaatCATACGACATGAAGACAGA 1953
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 1668 AGATGAAGCTGAAGAGGATGAAGAAGAAGGCAGTGTAGAATCATACGACATGAACACAGA 1727
Query 1954 TTTTCAAAACGGCGAGAAATTCTATGAAGAGGACGAGGAAGAAGAAGAGGATGGTAATGA 2013
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1728 TTTTCAAAACGGGGAGAAATTCTATGAAGAGGACGAGGGAGAAGAAGAGGATGGTAATGA 1787
Query 2014 TTTTGGATTGTATTGA 2029
|||||||||||||||
Sbjct 1788 CTTTGGATTGTATTGA 1803
> Ahg341076 jgi|Araly1|341076|fgenesh1_pg.C_scaffold_3000839
Length=3738
Score = 1657 bits (897), Expect = 0.0
Identities = 1024/1087 (94%), Gaps = 2/1087 (0%)
Strand=Plus/Plus
Query 215 ATGGTATGGTGTAACCATTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 274
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGTGTGGTGTAACCACTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 60
Query 275 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAATTTCCATTTTTCTACCGAAGTTACA 334
||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||
Sbjct 61 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAACTTCAATTTTTCTACAGAAGTTACA 120
Query 335 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCATCAGGTAACATAGTGAGGAGTGTTCAA 394
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 121 TTCGTTAAGAATGCTGCTGGACAGAGCCAAGCCTCAGGTAACATAGTGAGCAGTGTTCAA 180
Query 395 AGTGGGATTACAAGCTCACGTGAAAGGAGATTTAGAATAGCTAGAGATGAGCTTATGAAT 454
||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct 181 AGTGGGATTCCAAGCTCACGTGAAAGGAGATATAGAATAGCTAGAGATGAGTTTACGAAT 240
Query 455 TTGAAAGATGCATTGGGGATTGGTGATGAGAGAGATGATGTGATTGTCATCGCAGCTAAA 514
|||| |||||||||||| |||||||||||||||| ||||||||||| ||| || | | |
Sbjct 241 TTGAGAGATGCATTGGGAATTGGTGATGAGAGAGCTGATGTGATTGACATGGCTGTTCTA 300
Query 515 TTCTTTGAAAT-GGCAGTTGAGCAGAATTTCACGAAAGGCCGCAGAACTGAACTAGTACA 573
|||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 301 TTCTTT-AAATCGGCAGTTGAGCAGAATTTCACTAAAGGCCGCAGAACTGAACTAGTACA 359
Query 574 GGCTTCCTGCCTCTACTTGACGTGCAGGGAATTGAACATTGCGTTGCTTCTTATTGATTT 633
||||||||| ||||||||||| ||||||||||||||| || |||| ||||||||||||||
Sbjct 360 GGCTTCCTGTCTCTACTTGACTTGCAGGGAATTGAACGTTCCGTTTCTTCTTATTGATTT 419
Query 634 CTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTATACTTACAACTCTGTGA 693
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 420 CTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTGTACTTGCAACTCTGTGA 479
Query 694 AATGCTGTACCTTGTGGAAAATCGGAATTATGAAAAGCTTGTTGATCCTTCAATTTTCAT 753
|||||||||| ||| ||| |||| |||||||||||||||||||| ||||||||||||||
Sbjct 480 AATGCTGTACATTGCGGATAATCAAAATTATGAAAAGCTTGTTGACCCTTCAATTTTCAT 539
Query 754 GGATCGATTCTCAAACAGCTTATTGAAAGGAAAAAATAATAAAGATGTTGTGGCAACAGC 813
|||||||||||||||| |||||||||||||| | ||||||||| ||||||| ||||||
Sbjct 540 CGATCGATTCTCAAACATCTTATTGAAAGGAACACATAATAAAGCTGTTGTGAAAACAGC 599
Query 814 TAGAGACATTATAGCTAGTATGAAGAGAGATTGGATACAGACCGGCCGGAAGCCTAGTGG 873
|| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 600 TATAGCCATTATAGCTAGTATGAAGCGAGATTGGATACAGACCGGCCGGAAGCCTAGTGG 659
Query 874 AATATGTGGAGCAGCACTTTACACAGCTGCTCTTTCTCATGGTATCAAGTGCTCTAAGAC 933
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 660 AATATGTGGAGCAGCACTTTACACAGCTGCCCTTTCTCATGGTATCAAGTGCTCTAAGTC 719
Query 934 AGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTCACCAAACGATTGATTGAGTT 993
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 720 AGATATTGTAAACATTGTGCATATATGTGAAGCAACTCTAACCAAACGATTGATTGAGTT 779
Query 994 TGGCGATACGGATTCTGGAAATTTAAATGTTAATGAGCTCAGAGAAAGAGAATCGCATAA 1053
||| ||||||| |||||||||||||||||| ||||| ||| |||||||||||| |||||
Sbjct 780 TGGAAATACGGAGTCTGGAAATTTAAATGTTGATGAGATCACAGAAAGAGAATCTCATAA 839
Query 1054 AAGATCTTTTACCATGAAACCAACCTCAAATAAAGAGGCGGTGCTCTGTATGCATCAGGA 1113
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 840 AAGATCTTCTACCATGAAACCAACCTCAAACAAAGAGGCGGTGCTCTGTATGCATCAGGA 899
Query 1114 TAGTAAACCTTTTGGTTATGGACTATGTGAAGACTGCTACAAAGATTTCATAAATGTTTC 1173
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 900 TAGTAAACCTTTTGGTTATGGACTATGTAAAGACTGCTACGAAGATTTCATAAATGTTTC 959
Query 1174 TGGTGGACTTGTTGGTGGGTCCAATCCTCCTGCTTTCCAGCGCGCAGAGAAAGAGCGAAT 1233
|||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||
Sbjct 960 TGGTGGACTTGTTGGTGGGTCCGACCCTCCTGCTTTCCAGCGCGCAGAGAATGAGCGAAT 1019
Query 1234 GGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTAGTAGCCTAAACCACGATGAACA 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 GGAAAAAGCAGCTAGAGAAGAAAACGAGGGAGGAATTAGTAGCCTAAACCACGATGAACA 1079
Query 1294 ACTATAT 1300
|||||||
Sbjct 1080 ACTATAT 1086
Score = 732 bits (396), Expect = 0.0
Identities = 432/449 (96%), Gaps = 3/449 (1%)
Strand=Plus/Plus
Query 1343 GAGAAAGGTGAAA-AAGATAAAGATGGGGCTGAAGAACATGCTGATACTTCGGATGAATC 1401
||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1219 GAGAAAGGTGAAAGAA-ATAAAGATGGGGATGAAGAACATGCTGATACTTCGGATGAATC 1277
Query 1402 AGACAACTTTTCTGACATCAGTGATGATGAGGTAAATGGCTATATCAACAACGAGGAGGA 1461
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1278 TGACAACTTTTCTGACATCAGTGATGATGAGGTAGATGGCTATATCAACAACGAGGAGGA 1337
Query 1462 AACGCACTATAAGACGATCACATGGACAGAAATGAACAAAGATTATCTTGAGGAGCAAGC 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1338 AACGCACTATAAGACGATCACATGGACAGAAATGAACAAAGATTATCTTGAGGAGCAAGC 1397
Query 1522 TGCTAAGGAAGCAGCTCTGAAGGCGGCTAGTGAAGCTTTAAAAGCTAGCAACTCTAATTG 1581
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1398 CGCTAAGGAAGCAGCTCTGAAGGCGGCTAGTGAAGCTTTAAAAGCTAGCAACTCTAATTG 1457
Query 1582 CCCAGAAGATGCAAGAAAGGCTTTCGAAGCTGCCAAAGCTGATGCGGCAAAATCTAGAAA 1641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1458 CCCAGAAGATGCAAGAAAGGCTTTCGAAGCTGCCAAAGCTGATGCGGCAAAATCTAGAAA 1517
Query 1642 GGAAAAGCAACaaaaaaaaGCTGAGGAAGCAAAGAACGCGGCTCCTCCAGCCACAGCAGT 1701
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1518 GGAAAAGCAACAAAAAAAAGCTGAGGAAGCAAAGAACGCGGCTCCCCCAGCCACAGCAAT 1577
Query 1702 GGAGGCGGTACGCCGAACGCTTGATAAAAAGAGACTTAGTTCGGTGATCAACTACGATGT 1761
||| ||||| |||||||||||||| ||||||||||| |||| ||||||||| ||||||||
Sbjct 1578 GGAAGCGGTTCGCCGAACGCTTGAGAAAAAGAGACTAAGTTTGGTGATCAATTACGATGT 1637
Query 1762 TTTGGAGTCGCTATTTGATACATCC-GCA 1789
||||||| |||||||||||||||| |||
Sbjct 1638 TTTGGAGGAGCTATTTGATACATCCAGCA 1666
> Ahg316772 jgi|Araly1|316772|fgenesh1_pm.C_scaffold_2001805
Length=1725
Score = 987 bits (534), Expect = 0.0
Identities = 921/1101 (84%), Gaps = 54/1101 (5%)
Strand=Plus/Plus
Query 215 ATGGTATGGTGTAACCATTGCGTGAAGAATGTTCCCGGAATACG-CCCTTATGATGGTGC 273
||||| |||||||| ||||| | |||||||||||||||||| || ||||| || ||||
Sbjct 1 ATGGTGTGGTGTAAGCATTGTGCGAAGAATGTTCCCGGAATTCGCCCCTT-CGACGGTGG 59
Query 274 ATTGGCATGTAATTTATGTGGGAGGATATTGGAGAATTTCCATTTTTCTACCGAAGTTAC 333
||||||||| |||||||||||||||| ||||| || ||| |||||||||| || |||||
Sbjct 60 TTTGGCATGTGATTTATGTGGGAGGATTTTGGAAAACTTCAATTTTTCTACTGATGTTAC 119
Query 334 ATTCGTTAAGAATGCTGCTGGACAGAGCCAAGCATCAGGTAACATAGTGAGGAGTGTTCA 393
|||||||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||
Sbjct 120 CTTCGTTAAGAATGCCGCTGGACAGAGCCAAGCGTCAGGTAACATTGTGACGAGTGTTCA 179
Query 394 AAGTGGGATTACAAGCTCACGTGAAAGGAGATTTAGAATAGCTAGAGATGAGCTT-ATGA 452
|||||| || |||||||||||||||||||| |||||||||||||||||| || | ||
Sbjct 180 GAGTGGGCTTTCAAGCTCACGTGAAAGGAGAAAGAGAATAGCTAGAGATGAG-TTAAGGA 238
Query 453 ATTTGAAAGATGCATTGGGGATTGGTGATGAGAGAGATGATGTGATTGTCATCGCAGCTA 512
||||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||
Sbjct 239 ATTTGAAAGATGCCTTGGGAATTGGTGATGAGAGAGATGATGTGATTGTCATGGCTGCCG 298
Query 513 AATTCTTTGAAATGGCAGTTGAGCAGAATTTCACGAAAGGCCGCAGAACTGAACTAGTAC 572
||||||||||||||||| ||| || || ||||| ||||| |||||||||||||| ||||
Sbjct 299 AATTCTTTGAAATGGCAACTGACCAAAACTTCACTAAAGGGCGCAGAACTGAACTTGTAC 358
Query 573 AGGCTTCCTGCCTCTACTTGACGTGCAGGGAATTGAACATTGCGTTGCTTCTTATTGATT 632
|| ||||||| ||||||||||| ||||||||| ||| ||| |||| |||||||||||||
Sbjct 359 AGTCTTCCTGTCTCTACTTGACTTGCAGGGAAAAGAAAATTCCGTTTCTTCTTATTGATT 418
Query 633 TCTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTATACTTACAACTCTGTG 692
| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct 419 TTTCAAGCTACCTTCGAGTTAGCGTTTACGAGTTAGGTTCTGTGTACTTGCAACTCTGTG 478
Query 693 AAATGCTGTACCTTGTGGAAAATCG-GAATTATGAAAAGCTTGTTGATCCTTCAATTTTC 751
||||||||||||||||| |||| || ||| ||||| ||||||||||||||||||| |||
Sbjct 479 AAATGCTGTACCTTGTGCAAAA-CGAGAACTATGAGGAGCTTGTTGATCCTTCAATCTTC 537
Query 752 ATGGATCGATTC-TCAAACAGCTTATTGAAAGGA--A-A-AA-ATAATAAAGA-TGT-TG 803
|| ||||||| | || || |||||||||||| | | || |||| ||| | ||| ||
Sbjct 538 ATTCCTCGATTCATGAA-CAACTTATTGAAAGGTGCACACAATATAACAAAAAATGTCTG 596
Query 804 ---T--GG-CA-----ACAGCTAGAGACATTATAGCTAGTATGAAGAGAGATTGGATACA 852
| || | || |||| | |||||||| |||||||||||||||||||||| ||
Sbjct 597 GGATAAGGTCTTTGGTACGGCTACAAACATTATATCTAGTATGAAGAGAGATTGGATGCA 656
Query 853 GACCGGCCGGAAGCCTAGTGGAATATGTGGAGCAGCACTTTACACAGCTGCTCTTTCTCA 912
|||||||||||| || ||||||||||||||||||||| |||||| |||||| ||||||||
Sbjct 657 GACCGGCCGGAAACCAAGTGGAATATGTGGAGCAGCAATTTACATAGCTGCACTTTCTCA 716
Query 913 TGGTATCAAGTGCTCTA-AGACAGATATTGTAAACATTGTGCATATATGTGAAGCAACTC 971
|||||||| |||||||| || ||||||||| ||| ||||||||||| |||||||||||
Sbjct 717 TGGTATCATGTGCTCTAGAG-CAGATATTGCAAAAATTGTGCATATGTGTGAAGCAACAA 775
Query 972 TCACCAAACGATTGATTGAGTTTGGCGA-TACGGATTCTGGAAATTTAAATGTTAATGAG 1030
| |||||| |||||| |||||||| | | ||| | |||||| ||||| |||| |||||
Sbjct 776 TAACCAAAAGATTGAATGAGTTTG-CTAATACCAAGGCTGGAAGTTTAACTGTTGATGAG 834
Query 1031 CTCAGAGAAA-G--A---GA-ATCGCATAAAAGAT-CTTTTACCATGAA-ACCAACCTCA 1081
|| || ||| | | || ||||| |||| || |||||||| || ||||| ||
Sbjct 835 CTT-GATAAAAGCGAACCGATATCGCGTAAA-GAAGCTTTTACCCC-AAGACCAAATTCT 891
Query 1082 AATAAAG-AGGCGGTGCTCTGT-ATGCATCAGGATAGTAAACC-TTTTGGTTATGGACTA 1138
| ||| || | || |||| | ||| ||||| |||| | ||||||||||||| ||
Sbjct 892 GACGAAGGAGTAG-TGAACTGTCAA-CATAAGGATT-TAAAACGTTTTGGTTATGGATTA 948
Query 1139 TGTGAAGA-CTG-CTACAAAGATTTCAT-AAATGTTTCTGGTGGACTTGTTGGTGGGTCC 1195
||| |||| ||| | || | |||||||| ||| ||||||||||| |||||||||||||
Sbjct 949 TGT-AAGAGCTGTC-ACGATGATTTCATTAAAA-TTTCTGGTGGAATTGTTGGTGGGTCG 1005
Query 1196 AATCCTCCTGCTTTCCAGCGCGCAGAGAAAGAGCGAATGGAAAAAGCAGCTAGAGAAGAA 1255
||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct 1006 GATCCTCCTGCTTTCCAGCGAGCAGAGAAAGAGAGAATGGAAAAAGCAGCTAGAGAAGAA 1065
Query 1256 AACGAGGGAGGAATTAGTAGC 1276
|| |||||||||||| |||||
Sbjct 1066 AATGAGGGAGGAATTGGTAGC 1086
> Ahg918622 jgi|Araly1|918622|Al_scaffold_0357_1
Length=1263
Score = 893 bits (483), Expect = 0.0
Identities = 900/1093 (82%), Gaps = 61/1093 (6%)
Strand=Plus/Plus
Query 215 ATGGTATGGTGTAACCATTGCGTGAAGAATGTTCCCGGAATACGCCCTTATGATGGTGCA 274
||||| |||||||||||||| | |||||| ||||||||||||||||| ||||||||||||
Sbjct 1 ATGGTGTGGTGTAACCATTGTGGGAAGAACGTTCCCGGAATACGCCCCTATGATGGTGCA 60
Query 275 TTGGCATGTAATTTATGTGGGAGGATATTGGAGAATTTCCATTTTTCTAC-CGAAGTTAC 333
||| ||||| |||||||||| ||||| |||||||||||| |||||||||| | |||||||
Sbjct 61 TTGTCATGTGATTTATGTGGCAGGATTTTGGAGAATTTCAATTTTTCTACTC-AAGTTAC 119
Query 334 ATTCGTTAAGAATGCTGCTGGACAGAGCCAAGCATCAGGTAACATAGTGAGGAGTGTTCA 393
|||||||||||||| ||||||||||||||||| || ||||||||||||| |||||||||
Sbjct 120 TTTCGTTAAGAATGCAGCTGGACAGAGCCAAGCTTCTGGTAACATAGTGAAGAGTGTTCA 179
Query 394 AAGTGGGAT-TACAAGCTCACGTGAAAGGAGATTTAGAATAGCTAGAGATGAGCTTATGA 452
|||||||| | |||||||||||||||||||| | |||||||||| ||||||||||||||
Sbjct 180 GAGTGGGATGT-CAAGCTCACGTGAAAGGAGAATCAGAATAGCTATAGATGAGCTTATGA 238
Query 453 ATTTGAAAGATGCATTGGGGATTGGTGATGAGAGAGATGATGTGATTGTCATCGCAGCTA 512
|||||| ||| || ||||| ||||||||||| ||||||||||| |||||||| || |||
Sbjct 239 ATTTGAGAGACGCTTTGGGAATTGGTGATGACAGAGATGATGTTATTGTCATGGCTTCTA 298
Query 513 AATTCTTTGA-AATGGCAGTTGAGCAGAATTTCACGAAAGGCCGCAGAA-CTGAACTAGT 570
| |||||| | || |||| |||| | |||||||| |||||||| |||| | || |||||
Sbjct 299 ATTTCTTT-AGAACGGCACTTGATCTTAATTTCACTAAAGGCCGTAGAAGC-GAGCTAGT 356
Query 571 ACAGGCTTCCTGCCTCTACTTGACGTGCAGGGAATTGAACA-TTGC-GTTGCTTCTTATT 628
|| | |||| || ||||||||| | |||||| |||| || | |||| ||| |||||||||
Sbjct 357 ACTGTCTTCATGTCTCTACTTGTCTTGCAGGCAATT-AAAATTTGCGGTT-CTTCTTATT 414
Query 629 GATTTCTCAAGCTACCTTCGAGTTAGCGTTTATGAGTTAGGTTCTGTATACTTACAACTC 688
|||| |||||||||||||| ||||||||||| || ||||||||||| || || ||||||
Sbjct 415 CATTTTTCAAGCTACCTTCGTGTTAGCGTTTACGATTTAGGTTCTGTGTATTTGCAACTC 474
Query 689 TGTGAAATGCTGTACCTTGTGGAAAATCGGAATTATGA-AAAGCTTGTTGATCCTTCAAT 747
||||| ||||| ||| || ||||| | || || || ||| |||||||||||||||||
Sbjct 475 TGTGACATGCTCTACATTACAGAAAACCACAACTACGAGAAA-CTTGTTGATCCTTCAAT 533
Query 748 TTTCATGGATCGATTCTCAAACA-GCTTATTGAAA-G-G---A----AA-AAA-TAAT-- 793
|||||| | ||||| |||||| | ||||||||| | | | || ||| | |
Sbjct 534 TTTCATTCCTGGATTCACAAACATG-TTATTGAAAGGTGCACACCGTAAGAAAGTCGTGG 592
Query 794 AAAGATGTTGTGGCA-ACAGCTAGAGACATTATAGCTAGTATGAAGAGAGATTGGATACA 852
|| | || |||| | || |||| ||||||||||||||||||||||||||||||||| ||
Sbjct 593 GAACA-GTCGTGG-ACACGGCTACAGACATTATAGCTAGTATGAAGAGAGATTGGATGCA 650
Query 853 GACCGGCCGGAAGCCTAGTGGAATATGTGGAGCAGCACTTTACACAGCTGCTCTTTCTCA 912
|||||| ||||| || ||||||||||||||||||||||| || |||||||| ||||||||
Sbjct 651 GACCGGACGGAAACCAAGTGGAATATGTGGAGCAGCACTCTATACAGCTGCACTTTCTCA 710
Query 913 TGGTATCAAGTGCTCTAAGACAGATATTGT-AAACATTGTGCATATATGTGAAGCAACTC 971
||||||||||||||||||||||||||| || ||| |||||||||||||| ||||||||||
Sbjct 711 TGGTATCAAGTGCTCTAAGACAGATATCGTGAAA-ATTGTGCATATATGCGAAGCAACTC 769
Query 972 TCACCAAACGATTGATTGAGTTTGGCGATACGGATTCTGGAAATTTAAATGTTAATGAGC 1031
| || ||| |||||||||||||||| |||| || ||| || ||| | || | ||||||
Sbjct 770 TAACTAAAAGATTGATTGAGTTTGGAAATACCGAGGCTGCAAGTTTTACTGCTGATGAGC 829
Query 1032 TCAG-A-----GAAAGAGAATCGCATAAAAGAT-C----TT---T--TACCATGAAACCA 1075
|||| | ||||||||| | | |||||| | || | || | ||| |||
Sbjct 830 TCAGTAAAACTGAAAGAGAAA-GAAAAAAAGAAACGGAATTGCGTAGTAAAAGGAATCCA 888
Query 1076 ACCTCAAATAAAGA-GGCG--GTGCTCTGTATGCATCAGGATAGTAAACCTTTTGGTTAT 1132
| || | ||||| || | ||||||||||||||||| ||| |||||||| ||| ||||
Sbjct 889 ATTTCTTACAAAGAAGGAGTAGTGCTCTGTATGCATCAAGATTGTAAACCTGTTGATTAT 948
Query 1133 GGACTATGTGAAGA-CTGCTACAAAGATTTCAT-AAATGTTTCTGGTGGACTTGTTGGTG 1190
||| ||||| |||| ||| ||| | || ||||| ||| |||||||||||||||| ||||
Sbjct 949 GGATTATGT-AAGAGCTGTTACGATGAGTTCATGAAA-GTTTCTGGTGGACTTGAAGGTG 1006
Query 1191 GGTCCAATCCTCCTGCTTTCCAGCGCGCAGAGAAAGAGCGAATGGA--AAAA-GCAGCTA 1247
|||| ||||||| || |||||||| |||||||||||| ||||||| |||| || |||
Sbjct 1007 GGTCGGATCCTCCCGCCTTCCAGCGAGCAGAGAAAGAGAGAATGGAGGAAAAAGCTTCTA 1066
Query 1248 GAGAAGAAAACGA 1260
|||||||||||||
Sbjct 1067 GAGAAGAAAACGA 1079
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82351109690
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5