BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G09405.1
Length=1735
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478262 jgi|Araly1|478262|fgenesh2_kg.3__963__AT3G09410.1 1251 0.0
Ahg478260 jgi|Araly1|478260|fgenesh2_kg.3__961__AT3G09410.2 1079 0.0
Ahg928614 jgi|Araly1|928614|scaffold_301071.1 508 4e-143
> Ahg478262 jgi|Araly1|478262|fgenesh2_kg.3__963__AT3G09410.1
Length=1400
Score = 1251 bits (677), Expect = 0.0
Identities = 1081/1270 (85%), Gaps = 52/1270 (4%)
Strand=Plus/Plus
Query 319 GCTCTCTGCTACAATGCAGAACATGGTCTAAGAGTGACTGGCTTCTCGCTTCAATCGGAA 378
|||||||| ||| || |||| |||| ||||||||||||||||| ||||||| ||||||
Sbjct 29 GCTCTCTGTTACGGTGTAGAAAATGGGCTAAGAGTGACTGGCTTGTCGCTTCTATCGGAT 88
Query 379 TAGTCTTGATCGT-TTATTCCTTTTCTTTGTCCTTCAATTCAACTTCAGACTCTATCCCC 437
| || |||||||| || |||| | ||||| | | || || | |||||||||||| |||||
Sbjct 89 TCGTATTGATCGTGTTTTTCC-TCTCTTTCTTCATCGATCCCACTTCAGACTCTGTCCCC 147
Query 438 TCCGTT----GA-C-C-G--------------TAGCGATCTAGTTAAACTGAAGCTGTCG 476
|||||| || | | | ||||||||| || ||||||||| |||||
Sbjct 148 TCCGTTGACCGATCTCGGCCAATCATATTCCCTAGCGATCTGGTCAAACTGAAGTTGTCG 207
Query 477 AGTAAAGCTAAAGAGAGAGGAGCTTTTTGCTTAGATGGAAGCTTACCTGGTTATCACTTT 536
|||| |||||||||||||||||||||||| || ||||||||||| ||||| || || |||
Sbjct 208 AGTATAGCTAAAGAGAGAGGAGCTTTTTGTTTGGATGGAAGCTTGCCTGGGTACCATTTT 267
Query 537 CATAAGGGTTCAGGATCTGGCT-CCAATAGCTGGCTTCTTTATTTAGAGGGTGGAGGCGG 595
||| ||||||| |||||||||| |||| ||||||||| || |||| |||||||||||| |
Sbjct 268 CATGAGGGTTCTGGATCTGGCTCCCAA-AGCTGGCTTGTTCATTTGGAGGGTGGAGGCTG 326
Query 596 GTGCCGTACAATTGAGTCATGTTCTGCTAGAGCAATGACTAGGTTAGGTTCTTCCAACTT 655
|||| ||| || ||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct 327 GTGCAACACAGCTGCGTCATGTTCTGCTCGAGCATTGACTAAATTAGGTTCTTCCAACTA 386
Query 656 CTTTGAACATGAAGT-GCCtttttttGGCGTTTTAAGCAGTGACCCATCTCAAAACCCTG 714
||||||||| ||||| ||| ||| || |||||||||||||||||||||||||| ||||
Sbjct 387 CTTTGAACAAGAAGTGGCC-TTTCAAGGTGTTTTAAGCAGTGACCCATCTCAAAATCCTG 445
Query 715 ACTTCTTTAACTGGAAC-AGAGTTATGATACGGTACTGTGATGGTGCTTGTTTTTCTGGA 773
| ||||||||||||||| || ||| |||| |||||||||||||||||| |||| |||||
Sbjct 446 AATTCTTTAACTGGAACAAG-GTTGCGATAAGGTACTGTGATGGTGCTTCTTTTGCTGGA 504
Query 774 CACCCTGAAGCTGAATTCAAGAATGAAACACGGCTTTTCTTCCGCGGCCAGCTCATTTGG 833
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 505 CACCCTGAAGCTGAATTCAAGAATGAAACACGGCTTTTCTTCCGGGGTCAGCTCATTTGG 564
Query 834 GAGGCTATCATGGATGAATTGTTGTCGATGGGCATGTCACATGCGAAAC-GTGCCATGCT 892
|||||||| || |||||| |||||||||||||||||||| ||||||||| | ||||| ||
Sbjct 565 GAGGCTATTATTGATGAACTGTTGTCGATGGGCATGTCAGATGCGAAACAG-GCCATACT 623
Query 893 CACAGGATGTTCTGCTGGTGGCTTGTCTACTCTAATACATTGTGACTACTTTCGAGACCA 952
|||||||||||||||||||||||| | | ||| ||||||||||||||||||||||| ||
Sbjct 624 TACAGGATGTTCTGCTGGTGGCTTGGCAAGTCTTATACATTGTGACTACTTTCGAGATCA 683
Query 953 TCTGCCTAAAGATGCAACTGTTAAATGTGTTTCCGATGGAGGCTA-TATTCTTAATGTGC 1011
||| || ||||||||| |||| ||||||||||| ||||||||||| | |||| || ||||
Sbjct 684 TCTTCCAAAAGATGCAGCTGTCAAATGTGTTTCTGATGGAGGCTACT-TTCTCAACGTGC 742
Query 1012 TTGATGTCCTTGGAAACCCAACAATG-GGATCTTTCTTTCATGATGTTGTTACCCTGCAG 1070
||||||||||||||||||||||||| || ||||||| |||||||||||||| |||||
Sbjct 743 CTGATGTCCTTGGAAACCCAACAATGAGG-TCTTTCTATCATGATGTTGTTAATTTGCAG 801
Query 1071 AGCGTAGATAAGAGCTTGGATCAGAATTGTGTTGCCAAAATGGAACCATCTAAGTGTATG 1130
| ||||||||||||||||||||||| |||| ||||||| || |||||||||||||||
Sbjct 802 GGTGTAGATAAGAGCTTGGATCAGAAATGTGAAGCCAAAACAGAGCCATCTAAGTGTATG 861
Query 1131 TTTCCTCAAGAATCTC-TTAAAAACATAAGAACTCCGGTATTTCTTGTCAACACAGCCTA 1189
||||||||||||| || ||||||||||||||||||| ||||||||||| ||| |||||||
Sbjct 862 TTTCCTCAAGAAT-TCATTAAAAACATAAGAACTCCAGTATTTCTTGTGAACCCAGCCTA 920
Query 1190 CGATTATTGGCAGATTCAAAACGGCCTGGTACCAGATT-CTCCGGATCTAGATGAAAGAT 1248
||||| ||||||||||||||| | | |||||||| ||| || |||||| |||| |||| |
Sbjct 921 CGATTTTTGGCAGATTCAAAATGTCTTGGTACCA-ATTTCTGCGGATCCAGATAAAAGTT 979
Query 1249 GGA-AAATTTGTAGACTCAATATTCAGGAATGTGATGCCGCACAAATGAAAGTTCTGCAT 1307
|| ||| | | |||||||||||| ||||||||||||||||||| ||||||||||| ||
Sbjct 980 GGGCAAAGT-GCAGACTCAATATTAAGGAATGTGATGCCGCACAGATGAAAGTTCTACAC 1038
Query 1308 GGTTTCCGCAGTTCCCTGATCGATGCGATAGGAGAATTTCATGTGAACAAAGAGGGTGGG 1367
||||| |||||||| |||| |||||||| || ||||||||| ||||||||| |||||
Sbjct 1039 GGTTTTCGCAGTTCTATGATGGATGCGATTGGGGAATTTCATCAGAACAAAGATGGTGGC 1098
Query 1368 ATGTTTATAAATTCGTGCAATTCTCATTGCCAGATAAG--A-G--AGT--CATGGCATTC 1420
||||| ||| |||| ||| || |||||||||||| | | | | ||| ||||||| ||
Sbjct 1099 ATGTTCATAGATTCCTGCTATGCTCATTGCCAGACA-GTCATGTCAGTGACATGGCACTC 1157
Query 1421 CGCAACCTCAACAAGAATCGAAAATAAGACGATTGCAGAGTCTGTAGGTGATTGGTACTT 1480
| |||||||| ||||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct 1158 CCCAACCTCACCAAGAATCGAAAATAAGACAATCGCAGAATCTGTAGGTGACTGGTACTT 1217
Query 1481 CAACCGAAAACCGGTGAAGCTAATCGATTGTCCTTATCCGTGCAATGCCT-CTTGTTG-A 1538
|||||||||||||||||||||||||||||||||||| || |||||| ||| |||||| |
Sbjct 1218 CAACCGAAAACCGGTGAAGCTAATCGATTGTCCTTACCCATGCAAT-CCTTCTTGTTACA 1276
Query 1539 ACATGGATTT 1548
||||| ||||
Sbjct 1277 ACATGAATTT 1286
> Ahg478260 jgi|Araly1|478260|fgenesh2_kg.3__961__AT3G09410.2
Length=1122
Score = 1079 bits (584), Expect = 0.0
Identities = 673/717 (94%), Gaps = 2/717 (0%)
Strand=Plus/Plus
Query 823 AGCTCATTTGGGAGGCTATCATGGATGAATTGTTGTCGATGGGCATGTCACATGCGAAAC 882
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct 407 AGCTCATTTGGGAGACAATTATGGATGAATTGTTGTCGATGGGCATGTCACATGCGAAAC 466
Query 883 GTGCCATGCTCACAGGATGTTCTGCTGGTGGCTTGTCTACTCTAATACATTGTGACTACT 942
||| || ||||||||||||||||| ||||||||| ||||||| ||||||||||||||||
Sbjct 467 ATGCAATTCTCACAGGATGTTCTGCAGGTGGCTTGGCTACTCTTATACATTGTGACTACT 526
Query 943 TTCGAGACCATCTGCCTAAAGATGCAACTGTTAAATGTGTTTCCGATGGAGGCTATATTC 1002
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 527 TTCGAGACCATCTGCCTAACGATGCAACTGTTAAATGTGTTTCCGATGGAGGCTATATTC 586
Query 1003 TTAA-TGTGCTTGATGTCCTTGGAAACCCAACAATGGGATCTTTCTTTCATGATGTTGTT 1061
| || | ||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 TCAACT-TGCCTGATGTGCTTGGAAACCCAACAATGGGATCTTTCTTTCATGATGTTGTT 645
Query 1062 ACCCTGCAGAGCGTAGATAAGAGCTTGGATCAGAATTGTGTTGCCAAAATGGAACCATCT 1121
||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 646 ACCCTGCAGCGCGTAGATAGGAGCTTGGATCAGAATTGTGTAGCCAAAATGGAACCATCT 705
Query 1122 AAGTGTATGTTTCCTCAAGAATCTCTTAAAAACATAAGAACTCCGGTATTTCTTGTCAAC 1181
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 706 AAGTGTCTGTTTCCTCAAGAATCGCTTAAAAACATAAGAACTCCGGTATTTCTTGTCAAC 765
Query 1182 ACAGCCTACGATTATTGGCAGATTCAAAACGGCCTGGTACCAGATTCTCCGGATCTAGAT 1241
|||||||||||||||||||| |||||||| || ||||||||||| |||||| || |||||
Sbjct 766 ACAGCCTACGATTATTGGCAAATTCAAAATGGACTGGTACCAGAGTCTCCGAATTTAGAT 825
Query 1242 GAAAGATGGAAAATTTGTAGACTCAATATTCAGGAATGTGATGCCGCACAAATGAAAGTT 1301
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 GAAAGATGGGCGATTTGTAGACTCAATATTCAGGAATGTGATGCCGCACAAATGAAAGTT 885
Query 1302 CTGCATGGTTTCCGCAGTTCCCTGATCGATGCGATAGGAGAATTTCATGTGAACAAAGAG 1361
|| |||||||| || | |||||||||||||||||| ||||||||||||| | ||||||||
Sbjct 886 CTACATGGTTTTCGGAATTCCCTGATCGATGCGATCGGAGAATTTCATGAGGACAAAGAG 945
Query 1362 GGTGGGATGTTTATAAATTCGTGCAATTCTCATTGCCAGATAAGAGAGTCATGGCATTCC 1421
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 946 GGTGGGATGTTTATAAATTCGTGCAATTCTCATTGCCAGATAAGAGAGTCATGGCACTCC 1005
Query 1422 GCAACCTCAACAAGAATCGAAAATAAGACGATTGCAGAGTCTGTAGGTGATTGGTACTTC 1481
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 1006 CCAACCTCAACAAGAATCGAAAATAAGACGATCGCAGAGTCTGTAGGTGATTGGTACTAC 1065
Query 1482 AACCGAAAACCGGTGAAGCTAATCGATTGTCCTTATCCGTGCAATGCCTCTTGTTGA 1538
||||||||||| |||||||||||||||||||| || ||||||||| |||||||||||
Sbjct 1066 AACCGAAAACCAGTGAAGCTAATCGATTGTCCATACCCGTGCAATACCTCTTGTTGA 1122
Score = 346 bits (187), Expect = 3e-94
Identities = 203/211 (96%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 584 GGGTGGAGGCGGGTGCCGTACAATTGAGTCATGTTCTGCTAGAGCAATGACTAGGTTAGG 643
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 198 GGGTGGAGGCGGGTGCCGTACAATTGAGTCATGTTCTTCTAGAGCAATGACTAGGTTAGG 257
Query 644 TTCTTCCAACTTCTTTGAACATGAAGTGCCtttttttGGCGTTTTAAGCAGTGACCCATC 703
||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||
Sbjct 258 TTCTTCCAACTTCTTTGAACATGAAGTTCCCTTTCAAGGCGTTTTAAGCAGTGACCCATC 317
Query 704 TCAAAACCCTGACTTCTTTAACTGGAACAGAGTTATGATACGGTACTGTGATGGTGCTTG 763
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 318 TCAAAATCCTGACTTCTTTAACTGGAACAGAGTTATGATTCGGTACTGTGATGGTGCTTG 377
Query 764 TTTTTCTGGACACCCTGAAGCTGAATTCAAG 794
|||||||||||||||||||||||||||||||
Sbjct 378 TTTTTCTGGACACCCTGAAGCTGAATTCAAG 408
Score = 191 bits (103), Expect = 2e-47
Identities = 127/138 (92%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 309 ATGGTGATTCGCTCTCTGCTACAATGCAGAACATGGTCTAAGAGTGACTGGCTTCTCGCT 368
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1 ATGGCGATTCACTCTCTGCTACAATGCAGAACATGGTCTAAGAGTGACTGGCTTATCGCT 60
Query 369 TCAATCGGAATAGTCTTGATCGT-TTATTCCTTTTCTTTGTCCTTCAATTCAACTTCAGA 427
|||||||||||||||||||| || || |||||||||||| || ||| |||| ||||||||
Sbjct 61 TCAATCGGAATAGTCTTGAT-GTGTT-TTCCTTTTCTTTCTCTTTCGATTCGACTTCAGA 118
Query 428 CTCTATCCCCTCCGTTGA 445
||||||||||||| ||||
Sbjct 119 CTCTATCCCCTCCATTGA 136
> Ahg928614 jgi|Araly1|928614|scaffold_301071.1
Length=1375
Score = 508 bits (275), Expect = 4e-143
Identities = 349/385 (91%), Gaps = 4/385 (1%)
Strand=Plus/Plus
Query 500 TTTTTGCTTAGATGGAAGCTTACCTGGTTATCACTTTCATAAGGGTTCAGGATCTGGCTC 559
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 248 TTTTTGCTTGGATGGAAGCTTGCCTGGTTATCACTTTCATAAGGGTTCAGGATCTGGCTC 307
Query 560 CAATAGCTGGCTTCTTTATT-TAGAGGGTGGAGGCGGGTGCCGTACAATTGAGTCATGTT 618
||| ||||||||||||| | |||||||||||||| |||| ||| || ||||||||||
Sbjct 308 CAAAAGCTGGCTTCTTT-TCCTAGAGGGTGGAGGCTGGTGTAATACTATAGAGTCATGTT 366
Query 619 CTGCTAGAGCAATGACTAGGTTAGGTTCTTCCAACTTCTTTGAACATGAAGTG-CCtttt 677
|| || ||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||
Sbjct 367 CTTCTCGAGCAATGACTAGCTTAGGTTCTTCCAGCTTCTTTGAACATAAAGTGGCCTTTC 426
Query 678 tttGGCGTTTTAAGCAGTGACCCATCTCAAAACCCTGACTTCTTTAACTGGAACAGAGTT 737
|| |||||||||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct 427 AA-GGTGTTTTAAGCAGTGACCCATCTCAAAATCCAGACTTCTTTAACTGGAATAGAGTT 485
Query 738 ATGATACGGTACTGTGATGGTGCTTGTTTTTCTGGACACCCTGAAGCTGAATTCAAGAAT 797
||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 486 CTGATAAGGTACTGTGATGGTGCTTCTTTTGCTGGACACCCTGAAGCTGAATTCAAGAAT 545
Query 798 GAAACACGGCTTTTCTTCCGCGGCCAGCTCATTTGGGAGGCTATCATGGATGAATTGTTG 857
|| || ||||||||||| ||||||||||||||||||||||| || ||||||||| |||||
Sbjct 546 GAGACGCGGCTTTTCTTTCGCGGCCAGCTCATTTGGGAGGCAATTATGGATGAACTGTTG 605
Query 858 TCGATGGGCATGTCACATGCGAAAC 882
|||||||||||||||||||||||||
Sbjct 606 TCGATGGGCATGTCACATGCGAAAC 630
Score = 473 bits (256), Expect = 1e-132
Identities = 321/352 (91%), Gaps = 5/352 (1%)
Strand=Plus/Plus
Query 1201 AGATTCAAAACGGCCTGGTACCAGATTCTCCGGATCTAGATGAAAGA-TGGAAAATTTGT 1259
|||||||||| | |||||||||||||||| | ||| |||||| || | ||| ||| |||
Sbjct 1015 AGATTCAAAATGTCCTGGTACCAGATTCTGCAGATATAGATG-AATATTGGGCAATGTGT 1073
Query 1260 AGACTCAATATTCAGGAATGTGATGCCGCACAAATGAAAGTTCTGCATGGTTTCCGCAGT 1319
||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct 1074 AGACTCAATATTCAGGAATGTGATGCCGCCCAAATGAAAGTTCTACATGGTTTTCGCAGT 1133
Query 1320 TCCCTGATCGATGCGATAGGAGAATTTCATGTGAACAAAGAGGGTGGGATGTTTATAAAT 1379
|| || || |||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1134 TCTCTAATGGATGCGATCGGAGAATTTCATGAGAACAAAGAGGGTGGGATGTTTATAAAT 1193
Query 1380 TCGTGCAATTCTCATTGCCAGATAAGAGAG---TCATGGCATTCCGCAACCTCAACAAGA 1436
|||||||||||||||||||||| ||||||| |||||||| ||| |||||||| |||||
Sbjct 1194 TCGTGCAATTCTCATTGCCAGACAAGAGAGTCATCATGGCACTCCCCAACCTCACCAAGA 1253
Query 1437 ATCGAAAATAAGACGATTGCAGAGTCTGTAGGTGATTGGTACTTCAACCGAAAACCGGTG 1496
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1254 ATCGAAAATAAGACGATTGCAGAGTCTGTAGGTGATTGGTACTTCAACCGAAAACCAGTG 1313
Query 1497 AAGCTAATCGATTGTCCTTATCCGTGCAATGCCTCTTGTTGAACATGGATTT 1548
||||| ||||||||||| || ||||||||| |||||||||||||||||||||
Sbjct 1314 AAGCTGATCGATTGTCCATACCCGTGCAATACCTCTTGTTGAACATGGATTT 1365
Score = 248 bits (134), Expect = 1e-64
Identities = 189/214 (88%), Gaps = 10/214 (5%)
Strand=Plus/Plus
Query 291 CTTTG-CT-TCTGTTCTTCAATGGTGATTCGCTCTCTGCTACAATGCAGAACATGGTCTA 348
||||| || ||||||||||||||| ||||||||||||||||| |||||||| ||||||||
Sbjct 1 CTTTGCCTCTCTGTTCTTCAATGGCGATTCGCTCTCTGCTACGATGCAGAAAATGGTCTA 60
Query 349 AGAGTGACTGGCTTCTCGCTTCAATCGGAATAGTCTTGATCGT-TTATTCCTTTTCTTTG 407
| ||||| |||||| | ||| |||||||| ||||||||||||| || ||||||||||||
Sbjct 61 AAAGTGAATGGCTTGTGGCTGCAATCGGACTAGTCTTGATCGTGTT-TTCCTTTTCTTTC 119
Query 408 TCCTTCAATTCAACTTCAGACTCTATCCCCTCCGTTGACCGTAGCGATCTAGTTAAACTG 467
||| || ||||||||||||| | | |||||||||| |||||||| ||||||||||||
Sbjct 120 TCCGTCGATTCAACTTCAGA--C--T--CCTCCGTTGATCGTAGCGACCTAGTTAAACTG 173
Query 468 AAGCTGTCGAGTAAAGCTAAAGAGAGAGGAGCTT 501
||| ||||||||||||||||||||||||||||||
Sbjct 174 AAGTTGTCGAGTAAAGCTAAAGAGAGAGGAGCTT 207
Score = 183 bits (99), Expect = 3e-45
Identities = 112/118 (95%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1008 GTGCTTGATGTCCTTGGAAACCCAACAATGGGATCTTTCTTTCATGATGTTGTTACCCTG 1067
|||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 900 GTGCCTGATGTGCTTGGAAACCCAACAATGGGATCTTTCTTTCATGATGTGGTTACCCTG 959
Query 1068 CAG-AGCGTAGATAAGAGCTTGGATCAGAATTGTGTTGCCAAAATGGAACCATCTAAG 1124
||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 960 CAGGA-CGTAGATAAGAGCTTGGATCAGAATTGTGTAGCCAAAATGGAACCATCTAAG 1016
Score = 156 bits (84), Expect = 6e-37
Identities = 109/121 (90%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 891 CTCACAGGATGTTCTGCTGGTGGCTTGTCTACTCTAATACATTGTGACTACTTTCGAGAC 950
||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||
Sbjct 708 CTCACAGGATGTTCTGCAGGTGGCTTGGCTACTCTTATACATTGTGACTACTTTCGTGAT 767
Query 951 CATCTGCCTAA-AGATGCAACTGTTAAATGTGTTTCCGATGGAGGCTATATTCTTAATGT 1009
||||||| || ||||||| ||||||||||||||||||||||||||||| |||| || ||
Sbjct 768 AATCTGCC-AAGAGATGCAGCTGTTAAATGTGTTTCCGATGGAGGCTATTTTCTCAACGT 826
Query 1010 G 1010
|
Sbjct 827 G 827
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65096228705
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5