BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G12110.1
Length=1434
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478567 jgi|Araly1|478567|fgenesh2_kg.3__1268__AT3G12110.1 2135 0.0
Ahg321462 jgi|Araly1|321462|fgenesh1_pm.C_scaffold_4001519 1027 0.0
Ahg342019 jgi|Araly1|342019|fgenesh1_pg.C_scaffold_3001782 992 0.0
Ahg496065 jgi|Araly1|496065|fgenesh2_kg.8__1881__AT5G59370.1 961 0.0
Ahg474065 jgi|Araly1|474065|fgenesh2_kg.1__4019__AT1G49240.1 950 0.0
Ahg321465 jgi|Araly1|321465|fgenesh1_pm.C_scaffold_4001522 715 0.0
> Ahg478567 jgi|Araly1|478567|fgenesh2_kg.3__1268__AT3G12110.1
Length=1328
Score = 2135 bits (1156), Expect = 0.0
Identities = 1251/1297 (96%), Gaps = 6/1297 (0%)
Strand=Plus/Plus
Query 59 CACCCTCCTCGTTTCCTCAGAGATCCCCTCTCTAA-C-TTCT-AAGGATATAGAAAATGG 115
|||||||| |||||||||||||| || ||| || | || | |||||||||||||||||
Sbjct 35 CACCCTCCAGGTTTCCTCAGAGAT--CC-CTCGAATCATTTTGAAGGATATAGAAAATGG 91
Query 116 CAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGGTTAAGGCTG 175
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 92 CAGACGGTGAAGACATTCAGCCTCTTGTCTGTGACAATGGAACCGGAATGGTTAAGGCTG 151
Query 176 GATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTCCTCGAC 235
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 152 GATTTGCCGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATTGTTGGTCGTCCTCGTC 211
Query 236 ACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCTCAGT 295
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 212 ACACTGGTGTGATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCTCAGT 271
Query 296 CTAAGAGAGGTATTTTGACATTGAAATATCCTATTGAGCATGGTATTGTTAGCAACTGGG 355
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 272 CTAAGAGAGGTATTTTAACATTGAAATATCCTATTGAGCATGGTATTGTTAGCAACTGGG 331
Query 356 ATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCACCTGAAG 415
|||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 332 ATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGTGGCACCTGAGG 391
Query 416 AACACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCCAATCGTGAGAAAATGA 475
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 392 AGCACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCTAATCGTGAGAAAATGA 451
Query 476 CTCAGATTATGTTTGAAACTTTCAACACTCCTGCCATGTATGTCGCTATCCAAGCTGTTC 535
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 452 CACAGATTATGTTTGAAACTTTCAACACTCCTGCTATGTATGTCGCTATCCAAGCTGTTC 511
Query 536 TTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTGTTGGACTCTGGAGATGGTGTGA 595
||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 512 TTTCCCTCTACGCCAGTGGTCGTACTACTGGTATTGTGCTCGACTCTGGAGATGGTGTGA 571
Query 596 GTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATTCTGCGTTTGGACC 655
||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct 572 GTCACACTGTTCCAATTTACGAAGGATATGCTCTTCCACACGCCATTCTGCGTTTGGACC 631
Query 656 TTGCAGGCCGTGACCTTACTGATTACCTCATGAAGATCTTAACCGAGCGTGGTTACTCAT 715
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 632 TTGCAGGACGTGACCTTACTGATTACCTCATGAAGATCTTAACAGAGCGTGGTTACTCAT 691
Query 716 TCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAGAGAAACTTGCTTACATAG 775
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 692 TCACTACCTCAGCAGAGCGTGAAATTGTAAGGGATGTGAAAGAGAAACTTTCTTACATAG 751
Query 776 CACTTGACTACGAGCAAGAGATGGAAACAGCAAACACAAGCTCATCCGTTGAGAAGAGCT 835
| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct 752 CTCTTGACTACGAGCAAGAGATGGACACGGCAAACACAAGCTCATCCGTTGAGAAGAGTT 811
Query 836 ATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATTCCGCTGCCCGGAGG 895
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 812 ACGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATTCCGCTGCCCCGAGG 871
Query 896 TTCTGTTCCAACCGTCTTTGGTGGGAATGGAAGCTGCTGGTATTCACGAGACCACTTACA 955
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 872 TTCTGTTCCAACCATCTTTGGTGGGAATGGAAGCTGCTGGTATTCATGAGACCACTTACA 931
Query 956 ATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTATGGAAACATTGTGCTCA 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 932 ATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTATGGAAACATTGTGCTCA 991
Query 1016 GTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCAAAGAGATCACTGCTT 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 GTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCAAAGAGATCACTGCTT 1051
Query 1076 TGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAGAGGAAGTACAGTGTCT 1135
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1052 TGGCTCCAAGCAGCATGAAGATTAAGGTTGTTGCTCCACCAGAGAGGAAGTACAGTGTCT 1111
Query 1136 GGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAACAGATGTGGATAGCAAAGG 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1112 GGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAACAGATGTGGATAGCAAAGG 1171
Query 1196 CCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAGTGCTTCTAAGATTAAGCTC 1255
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1172 CTGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAGTGCTTCTAAGATTAAGCTC 1231
Query 1256 AAATCAAAGTGATGAATGATTGTTCTGTATTGGTAAAGCCTTTTGTTCATCGACTTTGTT 1315
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1232 GAATCAAAGTGATGAATGATTGTTCTGTATTGGTAAAGCCTTTTGTTCATCGACTTTGTT 1291
Query 1316 GCAAAATATTCTTTTGTTTTCTATGTTTCTTCACCAC 1352
|||||||||||||||||||||||||||||||||||||
Sbjct 1292 GCAAAATATTCTTTTGTTTTCTATGTTTCTTCACCAC 1328
Score = 63.9 bits (34), Expect = 3e-09
Identities = 34/34 (100%), Gaps = 0/34 (0%)
Strand=Plus/Plus
Query 1 TTCTCTTCTTCATTCGCTCCGTTTCTCTCTCAAA 34
||||||||||||||||||||||||||||||||||
Sbjct 1 TTCTCTTCTTCATTCGCTCCGTTTCTCTCTCAAA 34
> Ahg321462 jgi|Araly1|321462|fgenesh1_pm.C_scaffold_4001519
Length=1134
Score = 1027 bits (556), Expect = 0.0
Identities = 952/1144 (83%), Gaps = 24/1144 (2%)
Strand=Plus/Plus
Query 112 ATGGCAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGGTTAAG 171
||||| ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||
Sbjct 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
Query 172 GCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTCCT 231
||||| |||||||||||||||||||| ||||||| || ||||| || || |||||||||
Sbjct 61 GCTGGTTTTGCTGGAGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
Query 232 CGACACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCT 291
|| ||||| ||||| |||||||| ||||| ||||| |||||||| ||||| ||||| |||
Sbjct 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
Query 292 CAGTCTAAGAGAGGTATTTTGACAT-TGAAATATCCTATTGAGCATGGTATTGTTAGCAA 350
|| || ||| |||||||||| || | | || || |||||||||||||| ||||| | |||
Sbjct 181 CAATCGAAGCGAGGTATTTTAAC-TCTCAAGTACCCTATTGAGCATGGGATTGTCAACAA 239
Query 351 CTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCACC 410
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct 240 TTGGGATGATATGGAGAAGATTTGGCATCATACTTTCTATAATGAGCTCCGTGTTGCTCC 299
Query 411 TGAAGAACACCCTG-TTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCCAATCGTGAGA 469
||| || || || | |||| || || ||||| || || ||||| || || ||||||||||
Sbjct 300 TGAGGAGCATCC-GATTCTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGAGA 358
Query 470 AAATGACTCAGATTATGTTTGAAACTTTCAACACTCCTGCCATGTATGTCGCTATCCAAG 529
| |||||||| || |||||||| ||||| || | || || |||||||| ||||| || |
Sbjct 359 AGATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCAGG 418
Query 530 CTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTG-TTGGACTCTGGAGAT 588
|||||||||| || || || ||||||||||| || ||||||||| || ||||||||||||
Sbjct 419 CTGTTCTTTCTCTTTATGCCAGTGGTCGTACAACCGGTATTGTGCTT-GACTCTGGAGAT 477
Query 589 GGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATTCTGCGT 648
|||||||| ||||||||||| || ||||| || ||||| ||||||||||| || || |||
Sbjct 478 GGTGTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTACGT 537
Query 649 -TTGGACCTTGCAGGCCGTGACCTTACTGATTAC-CTCATGAAGATCTTAACCGAGCGTG 706
|| || ||||| || |||||||| || || | | || ||||||||| |||| |||||||
Sbjct 538 CTT-GATCTTGCTGGTCGTGACCTCACGGA-TGCGCTGATGAAGATCCTAACTGAGCGTG 595
Query 707 GTTACTCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAA-GAGAAAC-T 764
||||||| ||||| ||| |||||||||||||||| || || || | ||| ||||| | |
Sbjct 596 GTTACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACAT-AAAGGAGAAGCTT 654
Query 765 TGCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAG-CAAACACAAGCTCATCCG 823
||| ||||| || |||||||||||||| ||| | || |||| |||| || |||||| | |
Sbjct 655 TGC-TACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAA-ACCAGCTCAGCTG 712
Query 824 TTGAGAAGAGCTATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATTCC 883
||||||||| ||| ||| | |||||||| || ||||| ||||||||| |||| ||||||
Sbjct 713 TTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATAACCATTGGATCAGAGCGATTCC 772
Query 884 GCTGCCCGGAGGTTCTGTT-CCAACCGTCTTTGGTGGGAATGGAAG-CTGCTGGTATTCA 941
| ||||| |||||||| || ||| || ||| || | || |||| || ||||||||| ||
Sbjct 773 GTTGCCCAGAGGTTCT-TTACCAGCCATCTATGATTGGTATGG-AGAATGCTGGTATCCA 830
Query 942 CGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATC-TGTATG 1000
|| ||||| || || ||||| |||||||||||||| || ||||| ||||| | |||| |
Sbjct 831 TGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGAAAGGA-CTTGTACG 889
Query 1001 GAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCA 1060
| |||||||||||||||||||||||||| |||||||| ||||| || || || |||||||
Sbjct 890 GTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCAGGAATCGCCGACAGAATGAGCA 949
Query 1061 AAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAGA 1120
|||| |||||||||||||||||||||||||||||||| || || ||||| || |||||||
Sbjct 950 AAGAAATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCCAGAGA 1009
Query 1121 GGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAG-CATCACTCAGTACCTTCCAACAG 1179
|||| ||| |||||||||||||| || || || | | || |||||||||||||| |||
Sbjct 1010 GGAAATACTCCGTCTGGATTGGAGGGTCTAT-CTTGGCCTCCCTCAGTACCTTCCAGCAG 1068
Query 1180 ATGTGGATAGCAAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAGTGC 1239
|||||||| |||||||| || || || |||||||| || || || || |||||||| |||
Sbjct 1069 ATGTGGATCGCAAAGGCAGAATACGACGAGTCAGGCCCGTCGATTGTTCACAGGAAATGC 1128
Query 1240 TTCT 1243
||||
Sbjct 1129 TTCT 1132
> Ahg342019 jgi|Araly1|342019|fgenesh1_pg.C_scaffold_3001782
Length=1134
Score = 992 bits (537), Expect = 0.0
Identities = 950/1149 (83%), Gaps = 30/1149 (3%)
Strand=Plus/Plus
Query 112 ATGGCAGATGG-TGAAGACATTCAGCCTC-TCGTCTGTGACAATGGAACCGGAATGGTTA 169
||||| || || ||| || ||||| || | |||||||||||||||| ||||| ||||| |
Sbjct 1 ATGGCCGA-GGCTGATGATATTCAACC-CATCGTCTGTGACAATGGTACCGGTATGGTGA 58
Query 170 AGGCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTC 229
|||| |||||||| ||||||||||| ||||| ||||| ||||| || | |||||| | |
Sbjct 59 AGGCGGGATTTGCAGGAGATGATGCTCCAAGGGCTGTTTTCCCCAGTGTTGTTGGTAGGC 118
Query 230 CTCGACA-CACTGGTGTCATGGTTGGTATGGGA-CAAAAAGATGCTTACGTTGGTGATGA 287
| |||| || ||||||||||||||| || | | || || ||||| || |||||||||||
Sbjct 119 CAAGACATCA-TGGTGTCATGGTTGGGAT-GAACCAGAAGGATGCATATGTTGGTGATGA 176
Query 288 GGCTCAGTCTAAGAGAGGTATT-TTGACATTGAAATATCCTATTGAGCATGGTATTGTTA 346
||||| || |||||||||||| || || ||||| |||||||||||||||||| |||| |
Sbjct 177 AGCTCAATCCAAGAGAGGTATTCTT-ACCTTGAAGTATCCTATTGAGCATGGTGTTGTCA 235
Query 347 GCAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTG 406
||||||||||||||||||| ||||| |||||||||||||||||||||||||| || |||
Sbjct 236 GCAACTGGGATGATATGGAAAAGATCTGGCATCACACTTTCTACAATGAGCTGCGCATTG 295
Query 407 CACCTGAAGAACACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCCAATC-GT 465
| |||||||| |||||||||||||| || ||||||||||| ||||| |||||||| | |
Sbjct 296 CTCCTGAAGAGCACCCTGTTCTTCTTACCGAGGCTCCTCTTAACCCAAAGGCCAA-CAGA 354
Query 466 GAGAAAATGACTCAGATTATGTTTGA-AACTTTCAACACTCCTGCCATGTATGTCGCTAT 524
||||| |||||||| || |||||||| | |||| ||| |||| || ||||||||||| ||
Sbjct 355 GAGAAGATGACTCAAATCATGTTTGAGACCTTT-AACTCTCCCGCTATGTATGTCGCCAT 413
Query 525 CCAAGCTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTGTTGGACTCTGG 584
|||||||||||| ||||| ||||| ||||||||||| || ||||||||| |||| |||||
Sbjct 414 CCAAGCTGTTCTCTCCCTGTACGCCAGTGGTCGTACAACCGGTATTGTGCTGGATTCTGG 473
Query 585 AGATGGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCT--CTTCCACATGCTATT 642
||||||||| ||||||||| ||||| || | ||| | | || ||||||||||| ||
Sbjct 474 TGATGGTGTGTCTCACACTGTGCCAATCTACG-AGGGT-TTCTCACTTCCACATGCCATC 531
Query 643 CTGCGTTTGGACCTTGCAGGCCGTGACCTTACTGATTACCTCATGAAGAT-CTTAACCGA 701
|| ||| | |||||||| || |||||||| |||||||||||||||||||| ||| || ||
Sbjct 532 CTCCGTCTCGACCTTGCTGGTCGTGACCTCACTGATTACCTCATGAAGATCCTT-ACAGA 590
Query 702 GCGTGGTTAC-TCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAGAGA 760
| | |||||| | ||||| || |||||||||| ||||| ||||| || | || ||||
Sbjct 591 GAGAGGTTACAT-GTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAGGAGA 649
Query 761 AACT-TGCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAGCAAACACAAGCTCA 819
| || | ||| | || ||||||||||||| |||||||| || |||| || |||||
Sbjct 650 AGCTATCCTT-TGTTGCTGTTGACTACGAGCAGGAGATGGAGACCTCAAAGACCAGCTCT 708
Query 820 TCCGTTGAGAAGAGCTATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGA 879
||| | ||||||| |||||| || || ||||| || || ||||| || || | ||||||
Sbjct 709 TCCATCGAGAAGAACTATGAATTACCCGATGGGCAAGTCATCACGATCGGTGCTGAGAGA 768
Query 880 TTCCGCTGCCCGGAGGTTC-TGTTCCAACCGTC-TTTGGTGGGAATGGAAGCTGCTGGTA 937
||| | ||||| || | || ||||||| || || ||| |||||||||||||||||||| |
Sbjct 769 TTCAGATGCCCAGAAG-TCTTGTTCCAGCCCTCGTTT-GTGGGAATGGAAGCTGCTGGAA 826
Query 938 TTCACGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGT 997
| |||||||| || || || || |||||||||||||||||||||||||||||||||||||
Sbjct 827 TCCACGAGACAACCTATAACTCAATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGT 886
Query 998 ATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGA 1057
| || |||||||||||||||||||||||||| |||||| |||| ||||| || | ||||
Sbjct 887 ACGGTAACATTGTGCTCAGTGGTGGAACCACTATGTTCTCTGGTATTGCAGACCGTATGA 946
Query 1058 GCAAAGAGATCACTGCT-TTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCA 1116
||||||| ||||| || ||| | ||||||||||||||||||||||| ||||| |||||
Sbjct 947 GCAAAGAAATCACAGCACTTG-CACCAAGCAGCATGAAGATTAAGGTCGTTGCACCACCT 1005
Query 1117 GAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAA 1176
|| |||||||||||||||||||| || || |||||||| || || ||||| || |||||
Sbjct 1006 GAAAGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTTGCTTCCCTCAGCACATTCCAG 1065
Query 1177 CAGATGTGGATAGCAAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAG 1236
||||||||||| | ||||| |||||||||||| |||| ||| ||| || ||||| ||
Sbjct 1066 CAGATGTGGATCTCCAAGGCTGAGTATGATGAGGCAGGTCCAGGAATTGTTCACAGAAAA 1125
Query 1237 TGCTTCTAA 1245
|||||||||
Sbjct 1126 TGCTTCTAA 1134
> Ahg496065 jgi|Araly1|496065|fgenesh2_kg.8__1881__AT5G59370.1
Length=1462
Score = 961 bits (520), Expect = 0.0
Identities = 944/1150 (82%), Gaps = 23/1150 (2%)
Strand=Plus/Plus
Query 108 GAA-AATGGCAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGG 166
||| |||||| || |||||||||||||| || || || |||||||||||||| |||||||
Sbjct 159 GAAGAATGGCTGACGGTGAAGACATTCAACCGCTAGTTTGTGACAATGGAACGGGAATGG 218
Query 167 TTAAGGCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTC 226
||||||||||||| || || || ||||| |||||||| || || || ||||| || || |
Sbjct 219 TTAAGGCTGGATTCGCGGGTGACGATGCGCCAAGAGCGGTTTTTCCAAGCATTGTAGGCC 278
Query 227 GTCCTCGACACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATG 286
||||||| ||||| ||||| |||||||| ||||||||||| |||||||| ||||| || |
Sbjct 279 GTCCTCGCCACACGGGTGTGATGGTTGGGATGGGACAAAAGGATGCTTATGTTGGAGACG 338
Query 287 AGGCTCAGTCTAAGA-GAGGTATTTTGACAT-TGAAATATCCTATTGAGCATGGTATTGT 344
||||||| || || | | ||||||||||| | | ||||| || ||||||||||| |||||
Sbjct 339 AGGCTCAATC-AAAACGTGGTATTTTGAC-TCTCAAATACCCAATTGAGCATGGAATTGT 396
Query 345 TAGCAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGT 404
|| || ||||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 397 TAATAATTGGGACGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGT 456
Query 405 TGCACCTGAAGAACACCCTGTTCTTCTCA-CTGAGGCTCCTCTCAACCCCAAGGCCAATC 463
|||||||| || ||||| ||||| || | | || ||||||||||| || || || || |
Sbjct 457 GGCACCTGAGGAGCACCCGGTTCT-CTTAACCGAAGCTCCTCTCAATCCGAAAGCTAACC 515
Query 464 GTGAGAAAATGACTCAGATTATGTTTGAAAC-TTTCAACACTCCTGCCATGTATGTCGCT 522
||||||| |||||||| || |||||||| || ||| ||||||||||| |||||||| ||
Sbjct 516 GTGAGAAGATGACTCAAATCATGTTTGAGACATTT-AACACTCCTGCTATGTATGTTGCC 574
Query 523 ATCCAAGCTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTGTTGGACTCT 582
|| ||||||||||| || ||||| || ||||| ||||| ||||||||||| |||||||||
Sbjct 575 ATTCAAGCTGTTCTCTCACTCTATGCCAGTGGCCGTACAACTGGTATTGTTTTGGACTCT 634
Query 583 GGAGATGGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATT 642
|||||||||||||| ||||| || ||||| || || || || ||||||||||| || ||
Sbjct 635 GGAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTACGCTCTTCCACACGCGATC 694
Query 643 CTGCGT-TTGGACCTTGCAGGCCGTGACCTTACTGATTACCTCATGAAGATCTTAACCGA 701
|| ||| ||| |||| || || |||||||| || || |||||||||| ||| | || ||
Sbjct 695 CTACGTCTTG-ACCTAGCGGGTCGTGACCTCACAGACCACCTCATGAAAATCCTGACAGA 753
Query 702 GCGTGGTTACTCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAGAGAA 761
||||| ||||| ||||| || | || ||||||||||| ||||| || ||||||||||
Sbjct 754 ACGTGGCTACTCCTTCACCACAACTGCTGAGCGTGAAATTGTAAGAGACATGAAAGAGAA 813
Query 762 ACT-TGCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAGC-AAACACAAGCTCA 819
|| | |||| || || || ||||||||||||||| | || || | ||| ||||||||
Sbjct 814 GCTCT-CTTATATTGCTCTAGACTACGAGCAAGAGCTAGAGACTTCCAAA-ACAAGCTCG 871
Query 820 TCCGTTGAGAAGAGCTAT-GAG-TTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGA 877
||||||||||| |||| | ||| || ||||| ||||| ||||| |||||||||| ||||
Sbjct 872 TCCGTTGAGAAAAGCT-TCGAGCTT-CCTGACGGACAAGTGATAACCATTGGAGCAGAGC 929
Query 878 GATTCCGCTGCCCGGAGGTTCTGTTCCAACCGTCTTTGGTGGGAATGGAAGCTGCTGGTA 937
| || || || ||||| |||||||| || ||||| || | ||||||||| | | || |
Sbjct 930 GGTTTCGGTGTCCGGAAGTTCTGTTTCAGCCGTCAATGATCGGAATGGAAAATCCGGGAA 989
Query 938 TTCACGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGT 997
| || || ||||| || || || |||||||| |||||||||||||| ||||| ||| |||
Sbjct 990 TCCATGAAACCACATATAACTCTATCATGAAATGTGATGTGGATATTAGGAAAGATTTGT 1049
Query 998 ATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGA 1057
|||| ||||||||||| |||||||||||||| ||||| || |||| |||||| ||||
Sbjct 1050 ATGGTAACATTGTGCTAAGTGGTGGAACCACAATGTTTGGAGGGATTGGTGATAGAATGA 1109
Query 1058 GCAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAG 1117
||||||| || || |||||||||||||| || |||||||||||||| || |||||||| |
Sbjct 1110 GCAAAGAAATTACGGCTTTGGCTCCAAGTAGTATGAAGATTAAGGTCGTGGCTCCACCGG 1169
Query 1118 AGAGGAAGTACAGTGTCTGGATTGGAGGCTCCAT-TCTAGCATCACTCAGTACCTTCCAA 1176
|||||||||||||||| ||||| || ||||| || | |||| |||||||| || |||||
Sbjct 1170 AGAGGAAGTACAGTGTTTGGATCGGTGGCTCTATAT-TAGCTTCACTCAGCACTTTCCAG 1228
Query 1177 CAGATGTGGATAGC-AAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAA 1235
||||||||||| || |||| | ||||| ||||| || || || ||||| || || |||||
Sbjct 1229 CAGATGTGGATTGCGAAAG-CAGAGTACGATGAATCTGGACCCTCAATTGTGCATAGGAA 1287
Query 1236 GTGCTTCTAA 1245
|||||||||
Sbjct 1288 ATGCTTCTAA 1297
> Ahg474065 jgi|Araly1|474065|fgenesh2_kg.1__4019__AT1G49240.1
Length=1618
Score = 950 bits (514), Expect = 0.0
Identities = 942/1149 (82%), Gaps = 28/1149 (2%)
Strand=Plus/Plus
Query 112 ATGGCAGATGG-TGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGGTTAA 170
||||| || || ||| |||||||| ||| | |||||||||||||| || |||||||||||
Sbjct 179 ATGGCCGA-GGCTGATGACATTCAACCTATTGTCTGTGACAATGGTACTGGAATGGTTAA 237
Query 171 GGCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTCC 230
||||||||| |||||||||||||| || ||||| || ||||| || | ||||| || ||
Sbjct 238 GGCTGGATTCGCTGGAGATGATGCTCCCAGAGCGGTTTTCCCCAGTGTTGTTGGCCGACC 297
Query 231 TCGACA-CACTGGTGTCATGGTTGGTATGGGA-CAAAAAGATGCTTACGTTGGTGATGAG 288
| |||| ||| |||||||||||||| || | | || |||||||| || |||||||||||
Sbjct 298 TAGACACCAC-GGTGTCATGGTTGGGAT-GAATCAGAAAGATGCGTATGTTGGTGATGAA 355
Query 289 GCTCAGTCTAAGAGAGGTATTTTGACATTGAAATATCCTATTGAGCATGGTATTGTTAGC 348
|| || || || |||||||| | || |||||||| || |||||||||||| |||| |||
Sbjct 356 GCACAATCCAAAAGAGGTATCCTCACGTTGAAATACCCAATTGAGCATGGTGTTGTGAGC 415
Query 349 AACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCA 408
||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 416 AACTGGGATGACATGGAAAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTATTGCT 475
Query 409 CCTGAAGAACACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCCAATC-GTGA 467
|||||||| ||||| || || || || ||||||||||| ||||| || ||||| | | ||
Sbjct 476 CCTGAAGAGCACCCGGTGCTACTTACCGAGGCTCCTCTTAACCCAAAAGCCAA-CAGAGA 534
Query 468 GAAAATGACTCAGATTATGTTTGAAAC-TTTCAACACTCCTGCCATGTATGTCGCTATCC 526
||| ||||||||||| |||||||| || ||| || |||| || ||||| ||||| || |
Sbjct 535 GAAGATGACTCAGATCATGTTTGAGACCTTT-AATTCTCCAGCTATGTACGTCGCCATTC 593
Query 527 AAGCTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTGTTGGACTCTGGAG 586
|||||||||| || || ||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct 594 AAGCTGTTCTATCACTTTACGCCAGTGGTCGTACAACTGGTATTGTGTTGGACTCTGGTG 653
Query 587 ATGGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCTC--TTCCACATGCTATTCT 644
|||||||| ||||||||| ||||| || || || | | ||| ||||||||||||| ||
Sbjct 654 ATGGTGTGTCTCACACTGTGCCAATCTACGAGGGTT-T-CTCACTTCCACATGCTATCCT 711
Query 645 GCGTTTGGACCTTGCAGGCCGTGACCTTACTGATTACCTCATGAAGATC-TTAACCGAGC 703
||| | |||||||| || |||||||| ||||||||||||||||||||| ||| |||||
Sbjct 712 CCGTCTCGACCTTGCTGGTCGTGACCTCACTGATTACCTCATGAAGATCCTTA-CCGAGA 770
Query 704 GTGGTTAC-TCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAGAGAAA 762
| |||||| | ||||| || ||||||| || |||||||| || || | || |||||
Sbjct 771 GAGGTTACATG-TTCACCACAACAGCAGAACGGGAAATCGTGAGAGACATCAAGGAGAAG 829
Query 763 CTTGC-TTACATAGCACTTGACTACGAGCAAGAGATGGAAACAGCAAACACAAGCTCATC 821
||| | || | || | |||||||||||||||||||| || |||| || || || ||
Sbjct 830 CTTTCCTTTGTT-GCTGTGGACTACGAGCAAGAGATGGAGACCTCAAAAACCAGTTCCTC 888
Query 822 CGTTGAGAAGAGCTATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATT 881
| | ||||||| |||||| || || || ||||| |||||||| || || | ||||||||
Sbjct 889 CATCGAGAAGAACTATGAATTACCCGACGGACAAGTGATCACGATCGGTGCTGAGAGATT 948
Query 882 CCGCTGCCCGGAGGTTCTGTTCCAACCGTC-TTTGGTGGGAATGGAAGCTGCTGGTATTC 940
| | ||||| || || || ||||| || || |||| ||| |||||||||||| || || |
Sbjct 949 CAGGTGCCCAGAAGTCCTTTTCCAGCCATCATTTGTTGG-AATGGAAGCTGCAGGGATCC 1007
Query 941 ACGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTATG 1000
||||||| |||||||| || ||||||||||||||||| ||||||||||| || || || |
Sbjct 1008 ACGAGACAACTTACAACTCGATCATGAAGTGTGATGTTGATATCAGGAAAGACCTTTACG 1067
Query 1001 GAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCA 1060
| |||||||||||||||||||| || || |||||| | || ||||| || | |||||||
Sbjct 1068 GTAACATTGTGCTCAGTGGTGGTACAACTATGTTCTCAGGTATTGCAGACCGAATGAGCA 1127
Query 1061 AAGAGATCACTGCT-TTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAG 1119
|||||||||| ||| ||| | ||||||||||||||||||||||| || || ||||| |||
Sbjct 1128 AAGAGATCACAGCTCTTGCC-CCAAGCAGCATGAAGATTAAGGTCGTGGCACCACCCGAG 1186
Query 1120 AGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAACAG 1179
||||||||||||||||||||||| || || || || || || ||||| || ||||| |||
Sbjct 1187 AGGAAGTACAGTGTCTGGATTGGTGGTTCTATCCTTGCTTCCCTCAGCACTTTCCAGCAG 1246
Query 1180 ATGTGGATAGCAAAGGCCGAGTATGATGA-GTCAGGGCCAT-CAATAGTCCACAGGAAGT 1237
|||||||| | ||||| ||||||||||| | |||| ||| || | |||||||| || |
Sbjct 1247 ATGTGGATCTCTAAGGCTGAGTATGATGAAG-CAGGTCCAGGCATT-GTCCACAGAAAAT 1304
Query 1238 GCTTCTAAG 1246
|||||||||
Sbjct 1305 GCTTCTAAG 1313
> Ahg321465 jgi|Araly1|321465|fgenesh1_pm.C_scaffold_4001522
Length=1101
Score = 715 bits (387), Expect = 0.0
Identities = 661/793 (83%), Gaps = 20/793 (3%)
Strand=Plus/Plus
Query 112 ATGGCAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGGTTAAG 171
||||| ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||
Sbjct 1 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 60
Query 172 GCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTCCT 231
||||| |||||||| ||||||||||| ||||||| || ||||| || || |||||||||
Sbjct 61 GCTGGTTTTGCTGGGGATGATGCACCTCGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 120
Query 232 CGACACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCT 291
|| ||||| ||||| |||||||| ||||| ||||| |||||||| ||||| ||||| |||
Sbjct 121 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 180
Query 292 CAGTCTAAGA-GAGGTATTTTGACAT-TGAAATATCCTATTGAGCATGGTATTGTTAGCA 349
|| || || | |||||||||| || | | || || |||||||||||||| ||||||| ||
Sbjct 181 CAATCCAA-ACGAGGTATTTTAAC-TCTCAAGTACCCTATTGAGCATGGGATTGTTAACA 238
Query 350 ACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCAC 409
| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 239 ATTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTATAATGAGCTACGTGTTGCTC 298
Query 410 CTGAAGAACACCCTG-TTCTT-CTCACTGAGGCTCCTCTCAACCCCAAGGCCAATCGTGA 467
|||| || || || | || || || || ||||| || || ||||| || || ||||||||
Sbjct 299 CTGAGGAGCATCC-GATT-TTACTTACCGAGGCACCGCTTAACCCGAAAGCTAATCGTGA 356
Query 468 GAAAATGACTCAGATTATGTTTGAAACTTTCAACACTCCTGCCATGTATGTCGCTATCCA 527
||| |||||||| || |||||||| ||||| || | || || |||||||| ||||| ||
Sbjct 357 GAAGATGACTCAAATCATGTTTGAGACTTTTAATGCCCCGGCTATGTATGTGGCTATTCA 416
Query 528 AGCTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTG-TTGGACTCTGGAG 586
||||||||||| || || || ||||||||||| |||||||||||| ||| |||||||||
Sbjct 417 GGCTGTTCTTTCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTTG-ACTCTGGAG 475
Query 587 ATGGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATTCTGC 646
|||||||||| ||||||||||| || ||||| || ||||| ||||||||||| || || |
Sbjct 476 ATGGTGTGAGCCACACTGTTCCTATCTATGAGGGTTATGCCCTTCCACATGCGATCCTAC 535
Query 647 GT-TTGGACCTTGCAGGCCGTGACCTTACTGATTAC-CTCATGAAGATCTTAACCGAGCG 704
|| ||| | ||||| || |||||||| || ||| | || ||||||||| |||| |||||
Sbjct 536 GTCTTG-ATCTTGCTGGTCGTGACCTCACGGATG-CGCTGATGAAGATCCTAACTGAGCG 593
Query 705 TGGTTACTCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAG-AGAAAC 763
||||||||| ||||| ||| |||||||||||||||| || || || | |||| |||| |
Sbjct 594 TGGTTACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACAT-AAAGGAGAAGC 652
Query 764 TT-GCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAGC-AAACACAAGCTCATC 821
|| ||| |||| || |||||||||||||| ||| | || ||||| ||| || |||||| |
Sbjct 653 TTTGCT-ACATTGCTCTTGACTACGAGCAGGAGCTCGAGACAGCCAAA-ACCAGCTCAGC 710
Query 822 CGTTGAGAAGAGCTATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATT 881
|||||||||| ||| ||| | |||||||| || ||||||||||||||| |||| ||||
Sbjct 711 TGTTGAGAAGAACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGATT 770
Query 882 CCGCTGCCCGGAG 894
||| ||||| |||
Sbjct 771 CCGTTGCCCAGAG 783
Score = 320 bits (173), Expect = 2e-86
Identities = 269/316 (85%), Gaps = 4/316 (1%)
Strand=Plus/Plus
Query 930 TGCTGGTATTCACGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAA 989
||||||||| || || ||||| || || ||||| |||||||||||||| || ||||| ||
Sbjct 786 TGCTGGTATCCATGAAACCACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGAAA 845
Query 990 GGATC-TGTATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTG 1048
||| | |||| || |||||||||||||||||||||||||| |||||||| ||||| || |
Sbjct 846 GGA-CTTGTACGGTAACATTGTGCTCAGTGGTGGAACCACAATGTTCCCAGGAATCGCCG 904
Query 1049 ATAGGATGAGCAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTG 1108
| || ||||||||||| |||||||||||||||||||||||||||||||| || || ||||
Sbjct 905 ACAGAATGAGCAAAGAAATCACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTG 964
Query 1109 CTCCACCAGAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAG-CATCACTCAGT 1167
| || ||||||||||| ||| |||||||||||||| || || || | | || ||||||
Sbjct 965 CCCCTCCAGAGAGGAAATACTCCGTCTGGATTGGAGGGTCTAT-CTTGGCCTCCCTCAGT 1023
Query 1168 ACCTTCCAACAGATGTGGATAGCAAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTC 1227
|||||||| ||||||||||| |||||||| || |||||||||||||| || || || ||
Sbjct 1024 ACCTTCCAGCAGATGTGGATCGCAAAGGCAGAATATGATGAGTCAGGCCCGTCGATTGTT 1083
Query 1228 CACAGGAAGTGCTTCT 1243
|||||||| |||||||
Sbjct 1084 CACAGGAAATGCTTCT 1099
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53631064960
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5