BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G12670.1
Length=2056
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478626 jgi|Araly1|478626|fgenesh2_kg.3__1327__AT3G12670.1 3363 0.0
Ahg473316 jgi|Araly1|473316|fgenesh2_kg.1__3270__AT1G30820.1 870 0.0
> Ahg478626 jgi|Araly1|478626|fgenesh2_kg.3__1327__AT3G12670.1
Length=2044
Score = 3363 bits (1821), Expect = 0.0
Identities = 1974/2047 (96%), Gaps = 13/2047 (1%)
Strand=Plus/Plus
Query 20 GAAGAAGAAGAAGCAGAGACAAAAACGATTATGAAGTACGTTTTGGTGACAGGAGGAGTG 79
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 1 GAAGAAGAAGAAGCAGAGAC--AAACGAATATGAAGTACGTTTTGGTGACAGGAGGAGTG 58
Query 80 GTGAGTGGTCTTGGCAAAGGTGTCACTGCTAGTAGCATTGGACTTCTCCTTCAAGCATGT 139
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 59 GTGAGTGGTCTTGGCAAAGGTGTCACTGCTAGTAGCATTGGACTTCTTCTTCAAGCATGT 118
Query 140 GGTCTTCGTGTCACTTCCATTAAAATTGATCCTTATCTTAACACTGATGCTGGAACAATG 199
||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 119 GGTCTTCGTGTTACTTCCATCAAAATTGATCCTTATCTTAATACTGATGCTGGAACAATG 178
Query 200 TCTCCGTTTGAGCATGGAGAAGTATTTGTATTGGATGATGGTGGAGAGGTGGATTTGGAC 259
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 179 TCTCCGTTTGAGCATGGAGAAGTATTTGTATTGGATGATGGTGGAGAGGTGGACTTGGAC 238
Query 260 CTTGGAAACTATGAACGATTTTTAGACAGTACATTGACCCGTGACAACAATATAACTACT 319
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 239 CTTGGAAACTATGAACGATTTTTGGACAGTACATTGACCCGTGACAACAATATAACAACT 298
Query 320 GGAAAGATATACCAGTCAGTTATTGACAAGGAAAGGAAGGGGGACTACCTCGGAAGAACT 379
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 299 GGAAAGATATACCAGTCAGTCATTGACAAGGAAAGGAAGGGGGACTACCTTGGAAGAACT 358
Query 380 GTACAGGTTGTTCCTCATGTTACTGACGCAATCCAAGAGTGGATTGAGCGTGTAGCTAAT 439
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 GTACAGGTGGTTCCTCATGTTACTGACGCAATCCAAGAGTGGATTGAGCGTGTAGCTAAT 418
Query 440 GTTCCTGTGGATGGAAAGGAAGGTCCTCCTGATGTTTGTGTCATCGAATTAGGCGGGACT 499
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 419 GTTCCTGTGGATGGGAAGGAAGGTCCTCCTGATGTCTGTGTCATCGAATTAGGCGGGACT 478
Query 500 ATAGGTGATATTGAATCTATGCCCTTTATTGAGGCCCTTGGTCAATTCTCGTATAAAGTT 559
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 ATTGGTGATATTGAATCTATGCCCTTTATTGAGGCCCTTGGTCAATTCTCGTATAAAGTT 538
Query 560 GGACCTGGTAATTTCTGCTTGGTTCATGTCAGCCTTGTGCCTGTTCTCAGTGTTGTTGGT 619
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 GGGCCTGGTAATTTCTGCTTGGTTCATGTCAGCCTTGTGCCTGTTCTCAGTGTTGTTGGT 598
Query 620 GAACAGAAGACGAAGCCAACCCAGCATAGTGTGCGAGGCCTCAGGAGCCTTGGTTTGACA 679
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 599 GAACAGAAGACGAAGCCAACCCAGCATAGTGTGCGAGGACTCAGGAGCCTTGGTTTGACA 658
Query 680 CCAAATATCCTAGCATGTCGCAGCACGAAGGCACTTGAAGAAAATGTCAAGACAAAACTA 739
||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 659 CCAAATATCTTAGCATGTCGCAGCACAAAGGCACTTGAAGAAAATGTCAAGACAAAACTA 718
Query 740 TCTCAATTTTGCCATGTGCCGGAAGTGAATATAGTAACGCTCTATGATGTTCCAAATATT 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 TCTCAATTTTGCCATGTGCCGGAAGTGAATATAGTAACGCTCTATGATGTTCCAAATATT 778
Query 800 TGGCACGTTCCTCTGCTTTTAAGGGATCAAAAAGCTCATGAAGCGATCCTAAGAGAGTTA 859
||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||| ||||||
Sbjct 779 TGGCATGTTCCGCTGCTTTTAAGGGATCAAAAGGCTCACGAAGCCATCCTAAAAGAGTTG 838
Query 860 AATCTTAGTAATGCTATAAAGCCTGACTTGACAGAATGGACTGCAAGGACTAAAATTTAT 919
|| |||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 839 AACCTTAGTAATGCTGTAAAGCCTGACTTGGCAGAATGGACTGCGAGGACTAAAATTTAT 898
Query 920 GACACACTGCAAGACCCTGTGAGAATAGCTATGGTTGGAAAGTACACTGGCCTTACTGAT 979
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GACACACTGCAAGATCCTGTGAGAATAGCTATGGTTGGAAAGTACACTGGCCTTACTGAT 958
Query 980 TCTTACCTTTCCGTGTTGAAGGCCCTTTTGCATGCTTCTGTTGCATGTCACAAGAAGCTT 1039
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 TCTTACCTTTCTGTGTTGAAGGCCCTTTTGCATGCTTCTGTTGCATGTCACAAGAAGCTT 1018
Query 1040 GTCATAGAGTGGGTTGCAGCTAGTGACCTTGAAGAGATAACTGCACAAGAGACGCCAGAT 1099
|||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||
Sbjct 1019 GTCATAGAGTGGGTTGCAGCCAGTGACCTTGAAGAGATAACTGCACAGGAGGCGCCAGAT 1078
Query 1100 GTCCATAAGGCTGCATGGGATCTTTTGAAGGGTGCTGATGGTATCCTAGTACCAGGAGGG 1159
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 GTCCATAAAGCTGCATGGGATCTTTTGAAGGGTGCTGATGGTATCCTAGTACCAGGAGGG 1138
Query 1160 TTTGGTGATAGAGGAGTGCAAGGGAAGATACTTGCTACAAAGTACGCCCGTGAAAATCAA 1219
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 TTTGGTGATCGAGGAGTGCAAGGGAAGATACTTGCTACAAAGTACGCCCGTGAAAATCAA 1198
Query 1220 GTCCCTTTCCTTGGCATATGCCTGGGAATGCAGCTGGCTGTTGTTGAATTTGCCCGCTCC 1279
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 GTTCCTTTCCTTGGCATATGCCTGGGAATGCAGCTGGCTGTTGTTGAATTTGCCCGCTCC 1258
Query 1280 ATTCTTGGTTTTCACGATGCAAACAGCACAGAGTTTGAACCAGAAACTTCAAGCCCTTGC 1339
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATTCTCGGTTTTCATGATGCAAACAGCACAGAGTTTGAACCAGAAACTTCAAGCCCTTGC 1318
Query 1340 ATCATATTTATGCCAGAAGGATCCACAACTCATATGGGGGGCACAATGCGCTTAGGGTCA 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 ATCATATTTATGCCAGAAGGATCCACAACTCATATGGGGGGCACAATGCGCTTAGGGTCA 1378
Query 1400 AGGAAGACTTACTTCCAGGTTGCTGATTGCAAGTCTGCCAAGCTGTACGGTAATGCAAAG 1459
|||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1379 AGGAGGACTTACTTCCAGGTTGCTGATTGCAAGTCTTCCAAGTTGTACGGTAATGCAAAG 1438
Query 1460 TTTGTAGATGAGCGACACAGGCACAGATATGAGGTAAATCCAGATATGATATCAGAAATT 1519
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1439 TTTGTTGATGAGCGACACAGGCACAGATATGAGGTAAATCCAGATATGATATCAGAAATT 1498
Query 1520 GAGAAGGCTGGCCTCTCCTTTGTTGGGAAAGATGAGACTGGGCGTCGTATGGAGATTGTT 1579
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1499 GAGAAGGCTGGCCTCTCCTTTGTTGGGAAAGATGAAACTGGGCGTCGTATGGAGATTGTA 1558
Query 1580 GAACTACCAAGTCATCCATACTTTGTGGGTGCTCAGTTCCATCCTGAATTCAAGTCCAGA 1639
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1559 GAACTACCAAGTCATCCATACTTTGTGGGTGCCCAGTTCCATCCTGAATTCAAGTCCAGA 1618
Query 1640 CCTGGGAAACCTTCTGCATTGTTTCTAGGTCTTATCGCAGCAGCGTCTGGGTGTCTAGAA 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 CCTGGGAAACCTTCTGCATTGTTTCTAGGTCTTATCGCAGCAGCGTCTGGGTGTCTAGAA 1678
Query 1700 TCAGTATTGCAAACAGGTGGCAAGGTGAACATAGTTTCGAAAAATGGAGTAGCCAATGGA 1759
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 TCAGTTTTGCAAACAGGTGGCAAGGTGAACATAGTTTCGAAAAATGGAGTAGCCAATGGA 1738
Query 1760 TCTGCAATGGGGAAAGTTCATCAGAACGGCAATGTCTATAGCAATGGAAACGGGCTTCAC 1819
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1739 TCTGCAATGGGGAAAGCTCATCAGAACGGAAATGTCTATAGCAATGGAAACGGGCTTCAC 1798
Query 1820 CACTGACTCGAGAAAGGAACAAttttact----gcactttttaagcttttt-tgctttta 1874
|||||||||| |||||||||||||||||| |||||||| ||| ||||| ||||||||
Sbjct 1799 CACTGACTCGGGAAAGGAACAATTTTACTTACTGCACTTTTAAAG-TTTTTCTGCTTTTA 1857
Query 1875 atcaaagctttctttaA-GCAAGTCGACATGTATAGTCCCTGAGTTTTGTTTCCTTGTCT 1933
||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||
Sbjct 1858 ATCAAAGCTTTCTTTAAAGCCAGTCGACATGTATAGTCCTTGAGTTTTGTTTCCTTGTCT 1917
Query 1934 TGA---AA-ACTTGTTTGGTTTCGTTGTTAGGGTTTGGGGAGAGACATGGATATGAATGT 1989
|| || ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1918 TGCTTGAAGACTTGTTGGGTTTCGTTGTTAGGGTTTGGGGAGAGACATGGATATGAATGT 1977
Query 1990 GCTTCCTGTTCTTGGGTTACTTTTTACCTTTCATAGCTAAAAACTAATAAAGATCTATAT 2049
|||||||||||||||||| |||||| |||||||||||| |||| |||||||||||||||
Sbjct 1978 GCTTCCTGTTCTTGGGTTGCTTTTTGCCTTTCATAGCTGAAAAGTAATAAAGATCTATAA 2037
Query 2050 TCTAGTT 2056
|||||||
Sbjct 2038 TCTAGTT 2044
> Ahg473316 jgi|Araly1|473316|fgenesh2_kg.1__3270__AT1G30820.1
Length=2460
Score = 870 bits (471), Expect = 0.0
Identities = 1298/1688 (77%), Gaps = 93/1688 (6%)
Strand=Plus/Plus
Query 50 ATGAAGTACGT-TTTGGTGACAGGAGGAGTGGTGAGTGGTCTT-GGCAAAGGTGTCACTG 107
||||||||||| || || |||||||| || |||||||| || || ||||| || || |
Sbjct 325 ATGAAGTACGTGCTT-GTAACAGGAGGTGTTGTGAGTGG-ATTAGGGAAAGGAGTAACAG 382
Query 108 CTAGTAGCATTGGACTTCTCCTTCAAGCATGTGGTCTTCGTGTCACTTCCATTAAAATTG 167
| ||||| ||||| |||| ||| |||| ||||||||||| || ||||| || ||||| |
Sbjct 383 CAAGTAGTATTGGTGTTCTTCTTAAAGCTTGTGGTCTTCGAGTTACTTCTATCAAAATCG 442
Query 168 ATCCTTATCTTAACACTGATGCTGGAACAATGTCTCCGTTTGAGCATGGAGAAGTATTTG 227
|||||||||||||||||||||||||||| |||||||| ||||| || || ||||| ||||
Sbjct 443 ATCCTTATCTTAACACTGATGCTGGAACCATGTCTCCATTTGAACACGGTGAAGTTTTTG 502
Query 228 TATTGGATGATGGTGGAGAGGTGGAT-TTGGACCTTGGAAACTATGAACGATTTTTAGAC 286
| ||||| |||||||| ||||||||| ||| | |||||||| || ||| | ||| | ||
Sbjct 503 TCTTGGACGATGGTGGTGAGGTGGATCTTG-ATCTTGGAAATTACGAAAGGTTTCTGGAT 561
Query 287 AGTACA-TTGACCCGTGACAACAATATAACTACTGG-AAAGATATACCAGTCA-GTTATT 343
| || | || ||| | ||||| || || |||||||| ||| || |||||| || ||||||
Sbjct 562 A-TAAAATTAACCAGAGACAATAACATCACTACTGGGAAA-ATTTACCAG-CATGTTATT 618
Query 344 GAC-AAGGAAAGGAAGGGGGACTACCTCGGAA-GAACTGTACAGGTTGTTCCTCATGTTA 401
| | || || ||||| || || || | |||| || |||| ||||||||||||||||| |
Sbjct 619 G-CTAAAGAGAGGAAAGGAGATTATTTGGGAAAGA-CTGTTCAGGTTGTTCCTCATGTCA 676
Query 402 CTGACGCAATCCAAGAGTGGATTGAGCGTGTAGCTAATGTTCCTGTGGATGGAAAGGAAG 461
|||| ||||| ||||| ||||||||| | || || | ||||||| |||||| |||| |
Sbjct 677 CTGATGCAATTCAAGATTGGATTGAGAGAGTTGCGGTTATTCCTGTTGATGGAGAGGAGG 736
Query 462 GTCCTCCTGATGTTTGTGTCATCGAATTAGGCGGGACTATAGGTGATATTGAATCTATGC 521
||||| ||||||||||||| || |||||||| || |||||||||||||||||||| ||
Sbjct 737 GTCCTGCTGATGTTTGTGTTATTGAATTAGGTGGAACTATAGGTGATATTGAATCCGCGC 796
Query 522 CCTTTATTGAGGCCCTTGGTCAATTCTCGTATAAAGT-T-GGACCTGGTAATTTCTG-CT 578
| ||||||||||| ||||| |||||||| | || || | || || || |||||||| ||
Sbjct 797 CTTTTATTGAGGCGCTTGGCCAATTCTC-T-TACCGTGTAGGCCCAGGGAATTTCTGTCT 854
Query 579 TGGTTCATGTCAGCCTTGTGCCTGTTCTCAGTGTTGTTGGTGAACAGAAGACGAAGCCAA 638
||| ||||||||||| |||||||| || | |||||||||||||||||| || ||||| |
Sbjct 855 -GGTCCATGTCAGCCTCGTGCCTGTGCTTAATGTTGTTGGTGAACAGAAAACTAAGCCCA 913
Query 639 CCCAGCATAGTGTGCGAGGC-CTCAGGAGCCTTGGT-TTGACACCAAATATCCTAGCATG 696
| ||||||||||| | ||| || | ||| ||||| ||||| || ||||| |||| ||
Sbjct 914 CACAGCATAGTGT-CAAGGGGCT-ACGAGGCTTGGGCTTGACGCCGGATATCTTAGCTTG 971
Query 697 TC-GCAGCACGAAGGCACTTGAAGAAAATGTCAA-GACAAAACTATCTCAATTTTGCCAT 754
| | ||||| |||||||||||||| ||||| || || ||||||| ||||||||||||||
Sbjct 972 -CAGGAGCACAAAGGCACTTGAAGATAATGTGAAAGA-AAAACTAGCTCAATTTTGCCAT 1029
Query 755 GTGCCGGAAGTGAATATAGTAACGCTCTATGATGTTCCAAATATTTGGCACGTTCCTCTG 814
|| ||| | | |||| | || |||||||||||||| || |||||||| ||||| ||
Sbjct 1030 GTCCCGCTTGAGTATATTTTCACTCTCTATGATGTTCCCAACATTTGGCATATTCCTTTG 1089
Query 815 CTTT-TAAGGGATCAAAAAGCTCATGAAGCGATC-CTAAGAGAGTTAAATCTT---AGTA 869
|| ||| |||||| ||||||||| | ||| | || || | | |||||| ||||
Sbjct 1090 -TTGCTAAAGGATCAGAAAGCTCATCTGGTAATCTCAAA-AGTGCTCAATCTTGCTAGTA 1147
Query 870 ATGCTATAA--AGCCTGA-CTTGACAGAATGGACTGCAAG-GACTAAAATTTATGACACA 925
| || ||| ||||| |||| ||||||||| | || | || || | | ||||| |
Sbjct 1148 TT-CT-TAATGAGCCTTCTCTTGGG-GAATGGACTTCCAGAG-CTGAACTATGTGACA-A 1202
Query 926 CTG-CAAGACCCTGTGAGAATAGCTATGGTTGG-AAAGTACACTGGCCT-TACTGATTCT 982
| || | || |||||||| ||| | || || ||| || || ||||| | ||||| ||
Sbjct 1203 TTTACATGTGCCGGTGAGAATTGCTGTTGTGGGGAAA-TATACAGGCCTCT-CTGATGCT 1260
Query 983 TACCTTTCCGTGTTGAAGGCCCTTTTGCATGCTTCTGTTGCATGTCACAAGAAGCTTGTC 1042
|| || || || || ||||| || || ||||||||||| || |||| ||| ||||| ||
Sbjct 1261 TATCTCTCTGTCTTAAAGGCTCTCTTACATGCTTCTGTGGCTTGTCGCAAAAAGCTCGT- 1319
Query 1043 A-TAGAGTGGGTTGCAGCTAGTGACCTTGAAGA-GATAACTGCACAA-GAGACGCCAGAT 1099
| | || |||||| ||||| |||| || ||| | || ||||| | || |||| ||||||
Sbjct 1320 AGTTGATTGGGTTCCAGCTTGTGATCTCGAAAAAGA-AACTG-AGAAAGAGAATCCAGAT 1377
Query 1100 GTCC-ATAAGGCTGCATGGGATCTTT-TGAAGGGTGCT-GATGGTA-TCCTAGTACCAGG 1155
| | |||| ||||| ||| | || | ||||| | | ||||| | | || || || ||
Sbjct 1378 G-CGTATAAAGCTGCTTGGAAG-TTGCTAAAGGGGG-TAGATGG-AGTTCTTGTCCCTGG 1433
Query 1156 AGGGTTTGGTGATAGAGGAGTGCAAGGGAAGATACTTGCTACAAAGTACGCCCGTGAAAA 1215
||| ||||||||||| |||||| |||||||||| |||||| |||| || |||||||||||
Sbjct 1434 AGGTTTTGGTGATAGGGGAGTGGAAGGGAAGATTCTTGCTGCAAAATATGCCCGTGAAAA 1493
Query 1216 TCAAG-TCCCTTTCCTTGGCATATGCCT-GGGAATGCAGCTGGCTGTTGTTGAATTTGCC 1273
||| |||||||||| || || || || |||| ||||| | ||||| | || |||||
Sbjct 1494 -CAAAATCCCTTTCCTCGGTATTTGTCTCGGGA-TGCAGATTGCTGTCATCGAGTTTGCA 1551
Query 1274 CGCTCCA-TTCT-TGGTTTTCACGATGCAAACAGCACAGAGTTTGAACCAGAAACTTCA- 1330
|| || | |||| || || ||||| |||||||||||||| ||| |||| ||||| |
Sbjct 1552 CGATC-AGTTCTCTGCTTG-CACGACGCAAACAGCACAGAATTTAAACCTGAAACGAAAC 1609
Query 1331 AGCCCTTGCATCATATTT-ATGCCAGAAGGATCCACAACTCATATGGGGGGCACAATGCG 1389
| || | | ||||| ||| ||||| || || || | |||||||||||| ||||| |||||
Sbjct 1610 ATCCGT-GTATCAT-TTTCATGCCCGAGGGTTCGAGAACTCATATGGGAGGCACTATGCG 1667
Query 1390 CTTAGGGTCAAGGAAGA-C-TTACTTCCAGGTTGCTGATTGCAAGTCTGCCAAGCTGTAC 1447
|||||| ||||| || | | || ||| | || || |||| || || || || |||
Sbjct 1668 CTTAGGATCAAGAAA-ATCCTT-CTTTAATGTCAAAGACAGCAAATCCGCAAAACTATAC 1725
Query 1448 GGTAATGCAAAGTTTGTAGATGAGCGACA-CAGGCACAGATATGAGGTAAATCCAGATAT 1506
|| || ||| ||||| |||||| | || | | |||||||||||||| ||||| |||||
Sbjct 1726 GGGAACAAAAACTTTGTCGATGAGAGGCATC-GTCACAGATATGAGGTGAATCCTGATAT 1784
Query 1507 GAT--ATCAGAAATTGAGAAGGCTGGCCTCTCCTTT-GTTGGGAAAGATGAGACTGGGCG 1563
| | | | | |||||||||| || || || ||| | || ||||||||| ||||| |
Sbjct 1785 GGTTGAAC-GCC-TTGAGAAGGCCGGTCTTTC-TTTCGCTGCGAAAGATGAAACTGG-CA 1840
Query 1564 T-CGTATGGAGATTGTTGAACTACCAAGTCATCCATACTTTGTGGGTGCTCAGTTCCATC 1622
|| |||||||| |||||||||||| ||||| | |||| | |||||||| ||||| |
Sbjct 1841 AACGCATGGAGATCATTGAACTACCAAACCATCCTTTCTTTATCGGTGCTCAATTCCACC 1900
Query 1623 CTGAATTCAAGTCCAGACCTGGGAAACCTTCTGCAT-TGTTTCTAGGTCTTATCGCAGCA 1681
| || ||||| |||||||| |||||| | ||| | | ||||| |||| || || ||||||
Sbjct 1901 CCGAGTTCAAATCCAGACCCGGGAAAGCGTCTCC-TCTGTTTTTAGGACTCATTGCAGCA 1959
Query 1682 GCGTCTGG 1689
||| |||
Sbjct 1960 TCGTGTGG 1967
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77323197350
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5