BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G13624.1 Length=1792 Score E Sequences producing significant alignments: (Bits) Value Ahg929122 jgi|Araly1|929122|scaffold_301579.1 416 3e-115 Ahg929032 jgi|Araly1|929032|scaffold_301489.1 416 3e-115 Ahg929143 jgi|Araly1|929143|scaffold_301600.1 252 8e-66 Ahg937320 jgi|Araly1|937320|scaffold_501511.1 187 2e-46 Ahg478813 jgi|Araly1|478813|fgenesh2_kg.3__1514__AT3G14030.1 187 2e-46 Ahg951995 jgi|Araly1|951995|scaffold_28600002.1 178 1e-43 > Ahg929122 jgi|Araly1|929122|scaffold_301579.1 Length=1248 Score = 416 bits (225), Expect = 3e-115 Identities = 833/1112 (75%), Gaps = 99/1112 (9%) Strand=Plus/Plus Query 1 ATGACGACAATTTCTGATCTTCCTGAG-GATGTGGTAGAGGAGATACTCCCTAGGGTTCC 59 ||||||||||| |||||||| | | ||| ||||||||||||||||| | |||||||| Sbjct 21 ATGACGACAATGGGGGATCTTCCAG-GCGATTTGGTAGAGGAGATACTCTCAAGGGTTCC 79 Query 60 ATTGACATCTCTGAGCGC-AGTGCGATCCATTTGCAAAACGTGGAA-TACTTTGTCCAAG 117 ||||||||||||| || | | ||||||| |||||||| |||||| | |||| || || Sbjct 80 GCTGACATCTCTGAGGGCTA-TACGATCCACTTGCAAAAAGTGGAACT-CTTTATCGAAA 137 Query 118 AATCGTG-TTCTTT-GT---AAAG---CGGCAGTAAAGAAACAGTTTTTGGGATTCATTA 169 |||| | || ||| || |||| | |||| || ||| |||||| |||| || || | Sbjct 138 AATC-AGATT-TTTGGTAAAAAAGCAACAGCAGCAAGGAAGCAGTTTATGGGGTTTATGA 195 Query 170 TGATGGATT-ATAGGGTTTGCTCCA-TGAAATTCCATCTCC---GAA-ACG--ACGAGGG 221 ||| ||||| | ||| |||| || | || ||||| |||||| ||| || |||| | Sbjct 196 TGAAGGATTCA-AGGCTTTGTTCAATTG-AATTCGATCTCCAAGGAATCCGAAACGA-CG 252 Query 222 A-GG-AGACTTGGTTGATGATCTATCTATAAAGCAAGTAGGTATACTTGATCAAATCGAG 279 | || | |||| | | ||||| |||||||||||||||| || ||| |||||| ||||| Sbjct 253 ACGGCA-ACTTCG-T--TGATCCATCTATAAAGCAAGTAAATAAACTCGATCAATTCGAG 308 Query 280 ATATCTGAAGTCTTACATTGTGACGGCTTACTCCTTTTCGTCACTAAGGACAACTCAAGT 339 | ||| |||| || || |||||||| ||| |||| | | ||| |||||||||| || | Sbjct 309 GTCTCTCAAGTTTTTCACTGTGACGGTTTAGTCCTATGCATCATTAAGGACAACACAGGG 368 Query 340 CT-TGTGGTATGGAATCCC-TATTTGGGGCAAACGAGGTTGATACAACCCAGTAACAATT 397 || | |||||||||| ||| |||||||||||||| |||| ||| ||||| || ||||||| Sbjct 369 CTCT-TGGTATGGAA-CCCTTATTTGGGGCAAACTAGGTCGATCCAACCGAGAAACAATT 426 Query 398 TCCA-CTGTTCAGACCGCTATGCTATCGGATATGACAATAACCGTAACCT-CAAAATCTT 455 |||| || |||| | |||||| | |||||||| || |||||||| || |||||| || Sbjct 427 TCCAGATG-GAAGACAGGTATGCTCTTGGATATGATAACAACCGTAA-CTACAAAATTTT 484 Query 456 GAGGAATTTC-A-GTG-AT-TATG--G-AA--GC---TCTGGTTATGAAATCTACAATTT 503 ||||| |||| | || || | | | || || | ||| || ||| ||||| |||| Sbjct 485 GAGGATTTTCGATTTGTATCCAAGCAGAAACCGCGTTTTTGGGTACGAAGTCTACGATTT 544 Query 504 TCGTTCTAATTCATGAAAGAGTT-TTGATCTCACTTCCGACTGGTATATAGGGTCTAATA 562 | | ||||||||||| ||| || ||||| ||| | ||| ||| ||||| |||| || Sbjct 545 TAGCTCTAATTCATGGAAG-CTTCTTGATGTCAATCCCGGGTGGGATATACAGTCTCATC 603 Query 563 AACGTGGCGTGTCTTT-CAAGGGAAATACATA-CATCTTGGCTC-AAGGGAAAATA-AGA 618 | |||||||||||||| ||||| ||||| || || | || | || | |||| | ||| Sbjct 604 ATCGTGGCGTGTCTTTGAAAGGG-AATACTTATTTTCCT-GCGCAAAAGAAAAAAACAGA 661 Query 619 --GTGG-AT--AGTAGATGGAAGATTGAGGCTATTTTACTCTCG-TTTGATTTTACAA-C 671 | || || || | | || ||||| | | || |||| | | ||||||||||||| | Sbjct 662 GGGAGGAATAAAG-ACAACTAATATTGAAGATGTTCTACT-TTGTTTTGATTTTACAAGC 719 Query 672 TGAGAGATTTGGACCGCGGT-TG-CAGCTTCCGTTTGGCTTTTATTATCCACAAGATTTG 729 |||||||||||||||| | || || || |||||| || ||| || || || |||| Sbjct 720 -GAGAGATTTGGACCGC-CTCTGCCA-CTGCCGTTTCACTCTTACAATGCAGAA-ATTTT 775 Query 730 T-TCTCTTTATCTTGTGTCAGAGAAGAGCAGCTCG-TGGTATTACATCAAAGCT-GGATG 786 | ||||| |||||||||| || ||||||||||||| | | ||| ||||| ||| ||| | Sbjct 776 TGTCTCTCTATCTTGTGTTAGGGAAGAGCAGCTCGCT-ATGTTATATCAACGCTGGGA-G 833 Query 787 GTTTCTGGCGA-ACTGGAGATTTG-GATTACGAATAAGATTGATCCCGGTGTTGTCTCGT 844 | | | | || | | |||||||| | |||| ||||||||||||||| | || || | Sbjct 834 GCATGT-GAGACAATCGAGATTTGTG-TTACAAATAAGATTGATCCCAATACGGTTTCAT 891 Query 845 GGACCAAGTTTTTGAGATCCATCTCTTG-TTGT-CGAATTAGTATC-C--AAGCTGGGAG 899 ||| ||||||||||| | | || || | || | || || | | | | ||||||| Sbjct 892 GGAGCAAGTTTTTGATAACGTTCACTGGCTT-TCCG-GTT-G-A-CACTTTTTCTGGGAG 946 Query 900 -TTTCTTCATTAACGAGGAGAATCAAGTGGCTGTGGTTTTCGATCTTGACGA-ATATAAA 957 ||| |||||| | |||||||| |||| ||||||||||| ||||| || | ||||||| Sbjct 947 CTTT-TTCATTGATGAGGAGAAGAAAGTTGCTGTGGTTTTTGATCTAGA-TAGATATAAA 1004 Query 958 GGGAGTGAGACATGTCGCAACCAAACAGCTTACATTATCGGACAAGATGAATACTTCAAA 1017 || ||||| |||||| |||||| |||| | ||||| ||||||||||||||||||||| Sbjct 1005 CCGACCGAGACCTGTCGCTACCAAATAGCTCATATTATTGGACAAGATGAATACTTCAAA 1064 Query 1018 TCTGTGAATATTGGGGAGGCTCCGAATCTCGG 1049 ||||||||||| || | || || |||||||| Sbjct 1065 TCTGTGAATATCGGAGTTGCGCCAAATCTCGG 1096 Score = 244 bits (132), Expect = 1e-63 Identities = 524/704 (74%), Gaps = 63/704 (9%) Strand=Plus/Plus Query 1118 TACAATTTTCGTTCTAATTCATGAAAGAGTT-TTGATCTCACTTCCGACTGGTATATAGG 1176 ||| ||||| | ||||||||||| ||| || ||||| ||| | ||| ||| ||||| Sbjct 537 TACGATTTTAGCTCTAATTCATGGAAG-CTTCTTGATGTCAATCCCGGGTGGGATATACA 595 Query 1177 GTCTAATAAACGTGGCGTGTCTTT-CAAGGGAAATACATA-CATCTTGGCTC-AAGGGAA 1233 |||| || | |||||||||||||| ||||| ||||| || || | || | || | || Sbjct 596 GTCTCATCATCGTGGCGTGTCTTTGAAAGGG-AATACTTATTTTCCT-GCGCAAAAGAAA 653 Query 1234 AATA-AGA--GTGG-AT--AGTAGATGGAAGATTGAGGCTATTTTACTCTCG-TTTGATT 1286 || | ||| | || || || | | || ||||| | | || |||| | | ||||||| Sbjct 654 AAAACAGAGGGAGGAATAAAG-ACAACTAATATTGAAGATGTTCTACT-TTGTTTTGATT 711 Query 1287 TTACAA-CTGAGAGATTTGGACCGCGGT-TG-CAGCTTCCGTTTGGCTTTTATTATCCAC 1343 |||||| | |||||||||||||||| | || || || |||||| || ||| || || Sbjct 712 TTACAAGC-GAGAGATTTGGACCGC-CTCTGCCA-CTGCCGTTTCACTCTTACAATGCAG 768 Query 1344 AAGATTTGT-TCTCTTTATCTTGTGTCAGAGAAGAGCAGCTCG-TGGTATTACATCAAAG 1401 || |||| | ||||| |||||||||| || ||||||||||||| | | ||| ||||| | Sbjct 769 AA-ATTTTTGTCTCTCTATCTTGTGTTAGGGAAGAGCAGCTCGCT-ATGTTATATCAACG 826 Query 1402 CT-GGATGGTTTCTGGCGA-ACTGGAGATTTG-GATTACGAATAAGATTGATCCCGGTGT 1458 || ||| || | | | || | | |||||||| | |||| ||||||||||||||| | Sbjct 827 CTGGGA-GGCATGT-GAGACAATCGAGATTTGTG-TTACAAATAAGATTGATCCCAATAC 883 Query 1459 TGTCTCGTGGACCAAGTTTTTGAGATCCATCTCTTG-TTGT-CGAATTAGTATC-C--AA 1513 || || |||| ||||||||||| | | || || | || | || || | | | | Sbjct 884 GGTTTCATGGAGCAAGTTTTTGATAACGTTCACTGGCTT-TCCG-GTT-G-A-CACTTTT 938 Query 1514 GCTGGGAG-TTTCTTCATTAACGAGGAGAATCAAGTGGCTGTGGTTTTCGATCTTGACGA 1572 ||||||| ||| |||||| | |||||||| |||| ||||||||||| ||||| || | Sbjct 939 TCTGGGAGCTTT-TTCATTGATGAGGAGAAGAAAGTTGCTGTGGTTTTTGATCTAGA-TA 996 Query 1573 -ATATAAAGGGAGTGAGACATGTCGCAACCAAACAGCTTACATTATCGGACAAGATGAAT 1631 ||||||| || ||||| |||||| |||||| |||| | ||||| ||||||||||||| Sbjct 997 GATATAAACCGACCGAGACCTGTCGCTACCAAATAGCTCATATTATTGGACAAGATGAAT 1056 Query 1632 ACTTCAAATCTGTGAATATTGGGGAGGCTCCGAATCTCGGAAGACC-TGAGAAA-T---A 1686 ||||||||||||||||||| || | || || |||||||| | | | | | ||| | | Sbjct 1057 ACTTCAAATCTGTGAATATCGGAGTTGCGCCAAATCTCGGGATATCGT-ACAAAGTTGGA 1115 Query 1687 TG--CTCC-ACA-CATA-TATTGTCGCCCACTTGTGTGCTCTTC-T--TATGTTCCAAGC 1738 | |||| || |||| | | || || ||||||||||||||| | |||||||||||| Sbjct 1116 TTTACTCCGACGGCATACTGT-GTT-CC-ACTTGTGTGCTCTTCATCCTATGTTCCAAGC 1172 Query 1739 TTAGTGCCGCTCCAAATCAACCAACCAGACACAAGGAAAGAAAG 1782 ||||| | || ||||||||| |||||| || |||||||||||| Sbjct 1173 TTAGTTCAACTACAAATCAACAAACCAGGCAAAAGGAAAGAAAG 1216 > Ahg929032 jgi|Araly1|929032|scaffold_301489.1 Length=1468 Score = 416 bits (225), Expect = 3e-115 Identities = 466/576 (81%), Gaps = 42/576 (7%) Strand=Plus/Plus Query 52 AGGGTTCCATTGACATCTCTGAGCGCAGTGCGATCCATTTGCAAAACGTGGAATACTTTG 111 |||||||||||||||||| ||| ||||||||||| | ||||||||||||||| |||| Sbjct 567 AGGGTTCCATTGACATCTTTGAATGCAGTGCGATCAACTTGCAAAACGTGGAACGCTTTA 626 Query 112 TCCAAGAA-TCGT-GTTCTTT-GTAAAGC-G--GCAGTAAAGAAACAG--TTTT-TGGGA 162 ||||| || || | ||| ||| ||||||| | ||||||||||| ||| |||| ||||| Sbjct 627 TCCAA-AACTC-TGGTT-TTTGGTAAAGCAGCAGCAGTAAAGAAGCAGCTTTTTATGGGA 683 Query 163 TTCATTATGATGGATTATAGGGTTTGCTCCATGAAATTCCATCTCCGAAACGACGAGGGA 222 ||||||||||||||||||||||||||||| || ||||||||||||| |||||| | ||| Sbjct 684 TTCATTATGATGGATTATAGGGTTTGCTCGATTAAATTCCATCTCCAAAACGA-G-GGG- 740 Query 223 GGAGACTTGGTTGATGATCTATCTATAAAGCAAGTAGGTATACTTGATCAAATCGAGATA 282 ||||||||||||| | || || ||||||||||||||||| |||| | ||| | |||||| Sbjct 741 GGAGACTTGGTTG-T--TCCATGTATAAAGCAAGTAGGTACACTTAACCAAGTTGAGATA 797 Query 283 TCTGAAGTC-TTACATTGTGACGGCTTACTCCTTTTCGTCACTAAGGACAACTCAAGTCT 341 ||| ||||| || || |||||||||||| | || | |||||||||||| ||||||||||| Sbjct 798 TCTAAAGTCCTT-CAATGTGACGGCTTATTGCTATGCGTCACTAAGGATAACTCAAGTCT 856 Query 342 TGTGGTATGGAATCCCTATTTGGGGCAAACGAGGTTGATACAACCCAGTAACAATTTCCA 401 |||||||||||||||||||||||||||||| |||| ||| |||||| | ||||||||| | Sbjct 857 TGTGGTATGGAATCCCTATTTGGGGCAAACTAGGTGGATCCAACCCCGAAACAATTTCGA 916 Query 402 CT-GTTCAGACC-GCTATGCTATCGGATATGACAATAACCGTAACCTCAAAATCTTGAGG 459 ||| |||| | |||||| | ||||| ||||| |||||||| | ||||||||||||| Sbjct 917 AGAGTT-AGACAAG-TATGCTCTTGGATACGACAAGAACCGTAATCACAAAATCTTGAGG 974 Query 460 AATTTCAGTGATT-ATGGAAGC----TC----T----GGTTATGAAATCTACAATTTTCG 506 |||| ||| || | | |||| || | |||||||||||||||| ||| | Sbjct 975 GTTTTCTGTGTTTCA-GAAAGCGGACTCGGAGTTTTTGGTTATGAAATCTACAGTTTGAG 1033 Query 507 TTCTAATTCATGAAAGAGTTTT-GAT-CTCACTTCCGACTGGTATATAGGGTCTAATAAA 564 ||||||||||| ||| ||||| ||| | |||| |||||||| ||||| | | | || Sbjct 1034 CTCTAATTCATGGAAG-GTTTTTGATGC-CACTCCCGACTGGGATATACACTTTTTTGAA 1091 Query 565 CGTGGCGTGTCTTTCAAGGGAAATACATACATCTTG 600 | | ||||||||| || |||||||| || ||||| Sbjct 1092 CCCGTCGTGTCTTTGAAAGGAAATACTTATTTCTTG 1127 > Ahg929143 jgi|Araly1|929143|scaffold_301600.1 Length=1256 Score = 252 bits (136), Expect = 8e-66 Identities = 505/672 (75%), Gaps = 70/672 (10%) Strand=Plus/Plus Query 1122 ATTTTCGTTCTAATTCATGAAAGAG-TT-TTGATC-TCACTTCCGACTGGTATATAGGGT 1178 ||||| | ||||||||||| || | || |||||| | | |||| |||| |||| ||| Sbjct 530 ATTTTAGCTCTAATTCATG-GAG-GTTTGTTGATCAT-AAACCCGAGTGGTTTATATGGT 586 Query 1179 CTAATAAACGTGGCGTGTCTTTCAAGGGAAATACATACATCTTG--GCTCAAGGGAAAAT 1236 || || ||||||| |||||||| || |||||||| | || ||| ||| || ||||| Sbjct 587 CTCATCAACGTGGTGTGTCTTTGAAAGGAAATAC-T-TATTTTGCTGCTAAAAAGAAAAC 644 Query 1237 AAGAG-TGGATAGTAGATGGAAGATTGAGGCTATTTTACTCTCG-TTTGATTTTACAACT 1294 || || ||| | | ||||||||||||| | ||| ||||||| | |||||||| ||||| Sbjct 645 AACAGTTGG-T-G--GATGGAAGATTGAAGATATCTTACTCT-GTTTTGATTTCACAACA 699 Query 1295 GAGAGATTTGGACCGCGGT-TGCAGCTTCCGTTTGGCTTTTATTATCCACAAGA-TTTGT 1352 ||||||||||||||| || |||| ||||| ||| ||| | || || || |||| ||| Sbjct 700 GAGAGATTTGGACCG-AGTCTGCATCTTCCATTTTGCTCTGATGATGCAAAAGACAATGT 758 Query 1353 TCTCTTTATCTTGTGTCAGAGAAGAGCAGCTCGTGGTATTACATCAA-AGC-TGGATGGT 1410 | ||||||||||||| ||||| |||||||||| || ||||||||| | | |||| | Sbjct 759 T-GCTTTATCTTGTGTTAGAGATGAGCAGCTCGCCGTGTTACATCAATA-CAAGGATATT 816 Query 1411 T-TCTGGCGAACTGGAGATTTGGATTACGAATAAGATTGATCCCGGTGTTGTCTCGTGGA 1469 | ||| | || |||| |||||| |||||||||||||||||||| || || ||||||| Sbjct 817 TGTCT-GATAA-TGGATATTTGGGTTACGAATAAGATTGATCCCAATGCAGTGTCGTGGA 874 Query 1470 CCAAGTTTTTGAGATCCA-T-CTCTTGTTGT-CGAATTAGTATC-C--AAGCTGGGAGTT 1523 ||||||||||||| | | || ||| | || || | | | | ||| |||||||| Sbjct 875 ACAAGTTTTTGAGA--AAGTGGGCTGGTTATCCG-GTT-G-A-CACTGAAGGTGGGAGTT 928 Query 1524 TCTTCATTAACGAGGAGAATCAA-GTGGCTGTGGTTTTCGATCTTGA-CGAATATAAAGG 1581 |||||||| ||||||||||| || || ||||||||||||||||| || | ||| |||| Sbjct 929 TCTTCATTGACGAGGAGAAT-AATGTTGCTGTGGTTTTCGATCTAGACCAAAT-TAAACC 986 Query 1582 GAGTGAGACATGTCGCAACCAAACAGCTTACATTATCGGACAAGATGAATACTTCAAATC 1641 | || |||| | || ||||| || || | |||| ||| | ||||||||||| Sbjct 987 G-GT----CATG--G---CC--TCAGCTCACCTTGTTGGAC-AGA-G-GTACTTCAAATC 1031 Query 1642 TGTGAATATTGGGGAGGCTCCGAATCTCG--GAAGACCTGAGAA--AT--ATGCTCCACA 1695 ||||||||| || | | || ||| ||| |||| ||| || | || | | | Sbjct 1032 TGTGAATATCGGAAAAGTTCTTAATATCGTCGAAG--TTGACAAGTTTGGATTTTTTA-A 1088 Query 1696 CAT--A-TATTGTCGCCCACTTGTGTGCTCTTCTTATGTTCCAAGCTTAGTGCCGCTCCA 1752 | | ||| ||| |||||||||||||||||||||||||||||| |||||||| || || Sbjct 1089 GGTGAATTATCGTCTCCCACTTGTGTGCTCTTCTTATGTTCCAAGTTTAGTGCCACTGCA 1148 Query 1753 AATCAACCAACC 1764 |||||||||||| Sbjct 1149 AATCAACCAACC 1160 > Ahg937320 jgi|Araly1|937320|scaffold_501511.1 Length=1211 Score = 187 bits (101), Expect = 2e-46 Identities = 522/713 (73%), Gaps = 78/713 (11%) Strand=Plus/Plus Query 1130 TCTAATTCATGAAAGAGTT-TTGATCTCACTTCCGACTGGTATATAGGGTCTAATAAACG 1188 ||| ||| ||| ||| || ||| | ||||| |||| ||| | ||| |||| || |||| Sbjct 502 TCTGATTTATGGAAGTTTTATTG-TGTCACTCCCGATTGGGAGATACCGTCTCATCAACG 560 Query 1189 TGGCGTGTCTTTCAAGGGAAATA-CATACATCTTGGCTCAAGGGAAAAT-A-A--GAGTG 1243 ||| |||||||| |||||| ||| | || | |||| ||| | ||| || | | ||||| Sbjct 561 TGGTGTGTCTTTGAAGGGAGATAGC-TATTTTTTGGGTCATGAGAAGATAACAGTGAGTG 619 Query 1244 GA-TAGTA-----GATG-G-AAGATTGAGGCTATTTTACTCTCG-TTTGATTTTACAACT 1294 || || | || | | |||||||| | || |||||||| | ||||||||||||| | Sbjct 620 GAGGAGAAGGGGTGAGGAGAAAGATTGAAGATAGTTTACTCT-GTTTTGATTTTACAAGT 678 Query 1295 GAGAGATTTGGACCG---C-G-GT-TGCAGCTTCCGTTTGGCTTTTATTATCCACAAGA- 1347 ||||||||||||||| | | | ||| ||| ||||| || |||| | || || | Sbjct 679 GAGAGATTTGGACCGCCCCTGCCTCTGCCTCTTTCGTTTCACTCTTATCGTTCAGAA-AC 737 Query 1348 TTTGTTCTCTTTATCTTGTGTCAGAGAAGAGCAGCTCG-TG-GTATTACATCA-AAGCTG 1404 | || ||| | |||||||| |||| |||||||||| | || ||| | | | ||| Sbjct 738 TATG-ACTC--TGTCTTGTGTTGGAGAGGAGCAGCTCGCCGTGT-TTA-GTTACCACCTG 792 Query 1405 GATGGTT-TCTGGCG-A-ACTGGAGATTTGGATTACGAATAAGATTGATCCCGGTGTTGT 1461 || || ||| ||| | | | ||||||||| ||||||||||| |||| ||| || || Sbjct 793 AAT--TTATCTAGCGTATA-T-GAGATTTGGGTTACGAATAAGCTTGAACCCAATGCGGT 848 Query 1462 CTCGTGGACCAAGTTTTTGAGATCCATCTC-TTGTTGTCGA-ATT-AGTATCCAAGCTGG 1518 || |||| ||||||||||||||| || | | ||| || | || | || | ||||| Sbjct 849 GTCCTGGAGCAAGTTTTTGAGATCGTTC-CGTGGTTCTC-ATGTTCA-CATTGAGGCTGG 905 Query 1519 GAGTTTCTTCATTAACG-AGGAGAATCAAGTGGCTGTGGTTTTCGATCTTGACGAATATA 1577 |||||| |||||| ||| ||| ||| |||| ||||||||||| | || | | || || | Sbjct 906 GAGTTTTTTCATTGACGAAGG-GAAGAAAGTTGCTGTGGTTTTTGGTC-T-A-GATTACA 961 Query 1578 AA-GGGAGTGAGACATGTCGCAACCAAACAGCTTACATTATCGGACAAGATGAATACTTC 1636 || || |||||| ||| ||||||||||| |||| || ||||||| || ||||||| Sbjct 962 AATATGA-TGAGAC---TCGTTACCAAACAGCTCACATCATTGGACAAGGTGGATACTTC 1017 Query 1637 AAATCTGTGAATATTGGGGAGGCTCCGAATCTCGGAAGACCTGA-GAA--AT--A----T 1687 |||||||||||||| || || ||||||||||||| || || ||| || || | | Sbjct 1018 AAATCTGTGAATATCGGAGAAGCTCCGAATCTCGCAAAACTTGACAAACCATACATGTTT 1077 Query 1688 -G-----CTCCACACATA-TATTGTCGCCCACTTGTGTGCTCTTCTTATGTTCCAAGCTT 1740 | |||| | | | |||||| |||| |||||||||||||||||||||||||||| Sbjct 1078 GGATATACTCC-GAGAAAGTATTGTTACCCAGTTGTGTGCTCTTCTTATGTTCCAAGCTT 1136 Query 1741 AGTGCCGCTCCAAATCAACCAACCAG-ACACAAGG-AAAGAAAGCGATGATTA 1791 ||| | || |||||||||||||| | | | |||| |||||| | ||| |||| Sbjct 1137 AGTACAACTGCAAATCAACCAACCGGGA-A-AAGGGAAAGAACGTGATTATTA 1187 > Ahg478813 jgi|Araly1|478813|fgenesh2_kg.3__1514__AT3G14030.1 Length=672 Score = 187 bits (101), Expect = 2e-46 Identities = 196/240 (82%), Gaps = 13/240 (5%) Strand=Plus/Plus Query 1515 CTGGGAG-TTTCTTCATTAACGAGGAGAATCAAGTGGCTGTGGTTTTCGATCTTGACGAA 1573 ||||||| |||||| ||| | || ||||| |||| || |||||||||||||| |||| | Sbjct 424 CTGGGAGTTTTCTTTATTGATGACGAGAAGAAAGTCGCCGTGGTTTTCGATCTAGACGGA 483 Query 1574 TATAAAGGGAGTGAGACATGTCGCAACCAAACAGCTTACATTATCGGACAAGATGAATAC 1633 |||||| || ||||| |||||| ||||||||||| |||| || |||||| ||| |||| Sbjct 484 TATAAAAAGACCGAGACTTGTCGCTACCAAACAGCTCACATCATTGGACAATATGGATAC 543 Query 1634 TTCAAATCTGTGAATATTGGGGAGGCTCCGAATCTC-GGAAGACCTG--AGA----AATA 1686 ||||||||||||||||| | || |||||||||||| |||| ||||| ||| || Sbjct 544 TTCAAATCTGTGAATATCCGAGAAGCTCCGAATCTCGGGAA-ACCTGACAGATTTGGATT 602 Query 1687 TGCTC-CACACATATATTGTCG-CCCACTTGTGTGCTCTTCTTATGTTCCAAGCTTAGTG 1744 | ||| | | ||| |||||| | |||||||||||||||||||||||||||||| |||||| Sbjct 603 TACTCTCTC-CATTTATTGT-GTCCCACTTGTGTGCTCTTCTTATGTTCCAAGTTTAGTG 660 > Ahg951995 jgi|Araly1|951995|scaffold_28600002.1 Length=555 Score = 178 bits (96), Expect = 1e-43 Identities = 195/241 (81%), Gaps = 13/241 (5%) Strand=Plus/Plus Query 1515 CTGGGAG-TTTCTTCATTAACGAGGAGAATCAAGTGGCTGTGGTTTTCGATCTTGACGAA 1573 ||||||| |||||| ||| | || ||||| |||| || |||||||||||||| |||| | Sbjct 297 CTGGGAGTTTTCTTTATTGATGACGAGAAGAAAGTCGCCGTGGTTTTCGATCTAGACGGA 356 Query 1574 TATAAAGGGAGTGAGACATGTCGCAACCAAACAGCTTACATTATCGGACAAGATGAATAC 1633 |||||| || ||||| |||||| ||||||||||| |||| || |||||| ||| |||| Sbjct 357 TATAAAAAGACCGAGACTTGTCGCTACCAAACAGCTCACATCATTGGACAATATGGATAC 416 Query 1634 TTCAAATCTGTGAATATTGGGGAGGCTCCGAATCTC-GG-AA---GACCTGA---GAAAT 1685 ||||||||||||||||| | || |||||||||||| || || |||| || | | | Sbjct 417 TTCAAATCTGTGAATATCCGAGAAGCTCCGAATCTCGGGAAACCTGACCAGATTTGGATT 476 Query 1686 ATGCTC-CACACATATATTGTCG-CCCACTTGTGTGCTCTTCTTATGTTCCAAGCTTAGT 1743 | ||| | | ||| |||||| | |||||||||||||||||||||||||||||| ||||| Sbjct 477 TTACTCTCTC-CATTTATTGT-GTCCCACTTGTGTGCTCTTCTTATGTTCCAAGTTTAGT 534 Query 1744 G 1744 | Sbjct 535 G 535 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67267372670 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5