BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G13790.1
Length=1964
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478781 jgi|Araly1|478781|fgenesh2_kg.3__1482__AT3G13790.1 3077 0.0
Ahg474565 jgi|Araly1|474565|fgenesh2_kg.1__4519__AT1G55120.1 713 0.0
> Ahg478781 jgi|Araly1|478781|fgenesh2_kg.3__1482__AT3G13790.1
Length=1962
Score = 3077 bits (1666), Expect = 0.0
Identities = 1876/1974 (95%), Gaps = 27/1974 (1%)
Strand=Plus/Plus
Query 5 AAACCAAGCCACAAAGAAATTAAATACACACAATGACCAAAGAAGTTTGCTCCAACATTG 64
|||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAACCAGGCCAGAAAGAAAATAAATACACACAATGACCAAAGAAGTTTGCTCCAACATTG 60
Query 65 GACTTTGGTTATTGCTCACGTTACTTATTGGTAACTATGTCGTCAATCTTGAAGCCTCGC 124
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 GACTTTGGTTATTGTTCACGTTACTTATTGGTGACTATGTCGTCAATCTTGAAGCCTCGC 120
Query 125 ACCATGTCTACAAGAGACTTACCCAAAGCACTAACACCAAATCTCCTTCCGTAAACCAGC 184
||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 121 ACCATGTTTACAAGAGACTAACCCAAAGCACTAACATCAAATCTCCTTCCGTAAACCAGC 180
Query 185 CCTACCGGACCGGTTTCCATTTCCAACCCCCCAAAAATTGGATGAACGATCCTAATGGGC 244
|||||||||| ||||||||||| ||||| || |||||||||||| | | | ||||
Sbjct 181 CCTACCGGACAGGTTTCCATTTTCAACCTCCAAAAAATTGGATG-A--A--C----GGGC 231
Query 245 CTATGATATACAAAGGAATATATCATCTTTTCTACCAATGGAACCCGAAAGGAGCCGTGT 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 232 CTATGATATACAAAGGAATATATCATCTTTTCTACCAATGGAACCCGAAAGGAGCTGTGT 291
Query 305 GGGGTAACATCGTGTGGGCTCATTCCACGTCAACAGACTTAATCAATTGGGATCCACATC 364
|||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||
Sbjct 292 GGGGTAACATCGTGTGGGCTCATTCCACGTCAACAGACTTAATCAACTGGAACCCACATC 351
Query 365 CTCCAGCTATCTTCCCATCTGCACCCTTCGATATCAACGGATGCTGGTCCGGTTCAGCTA 424
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 352 CTCCAGCTATCTTCCCATCTGCACCGTTCGATATCAACGGATGCTGGTCCGGTTCGGCTA 411
Query 425 CTATTCTCCCTAATGGAAAACCGGTTATCCTCTATACCGGAATCGACCCTAAGAACCAAC 484
| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||
Sbjct 412 CAATTCTCCCTAATGGCAAACCGGTTATTCTATATACCGGAATCGACCCTAAGAACCAAC 471
Query 485 AGGTCCAAAACATAGCCGAGCCTAAGAATCTCTCCGATCCTTATCTCCGAGAATGGAAAA 544
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 472 AGGTCCAAAACATAGCGGAGCCTAAGAATCTCTCTGATCCTTATCTCCGAGAATGGAAAA 531
Query 545 AGTCGCCGTTAAATCCTCTCATGGCTCCTGACGCCGTTAACGGAATCAACGCCAGCTCGT 604
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 532 AATCGCCGTTAAATCCTCTGATGGCTCCTGACGCCGTTAACGGAATCAACGCCAGCTCGT 591
Query 605 TCCGTGACCCAACCACCGCGTGGCTAGGCCAAGACAAGAAATGGAGAGTGATCATCGGAA 664
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 592 TCCGTGACCCAACCACCGCGTGGCTAGGCCAAGACAAGAAGTGGAGAGTGATTATCGGAA 651
Query 665 GCAAGATTCACCGTCGTGGACTAGCCATTACTTACACGAGTAAAGACTTTCTAAAATGGG 724
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 652 GCAAGATTCACCGTCGTGGACTAGCGATTACTTACACGAGTAAAGACTTTCTAAAATGGG 711
Query 725 AAAAATCTCCAGAGCCGTTGCATTACGACGACGGAAGTGGAATGTGGGAATGTCCTGATT 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 AAAAATCTCCAGAGCCGTTGCATTACGACGACGGAAGTGGAATGTGGGAATGTCCTGATT 771
Query 785 TTTTCCCGGTCACGAGGTTTGGTTCTAACGGCGTGGAAACGTCTTCGTTTGGTGAACCTA 844
|||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 772 TTTTCCCGGTGACGAGATTTGGTTCTAACGGCGTGGAAACGTCTTCGTTTGGTGGACCTA 831
Query 845 ATGAGATTTTGAAGCACGTGTTGAAAATAAGTTTGGACGACACGAAACATGATTATTACA 904
|||||||||| ||||||||||||||| |||| |||||||| |||||||||||||||||||
Sbjct 832 ATGAGATTTTAAAGCACGTGTTGAAAGTAAGCTTGGACGATACGAAACATGATTATTACA 891
Query 905 CGATTGGTACGTACGATCGGGTTAAAGATAAATTCGTACCGGACAAT-GGTTTCAAGATG 963
|||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 892 CGATTGGTACGTACGACCGGGTTAAAGATAAATTCGTACCGGACAATGGGTTT-AAGATG 950
Query 964 GACGGTACGGCTCCGAGATACGATTACGGAAAGTATTACGCGTCTAAAACGTTTTTTGAC 1023
||| |||||||||| |||||||||||||| |||||||||||||| |||||||||| ||||
Sbjct 951 GACAGTACGGCTCCAAGATACGATTACGGGAAGTATTACGCGTCGAAAACGTTTTATGAC 1010
Query 1024 TC-GGCTAAGAACCGGAGAATCTTGTGGGGTTGGACTAACGAGTCATCGTCGGTTGAGGA 1082
|| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1011 TCTGGC-AAGAACCGGAGAATCTTGTGGGGTTGGACTAACGAGTCATCGTCTGTTGAGGA 1069
Query 1083 TGATGTTGAGAAAGGCTGGTCCGGTATTCAGACGATTCCAAGGAAAATATGGCTTGATAG 1142
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 1070 TGATGTTGAGAAAGGCTGGTCCGGTATTCAGACGATTCCGAGGAAAATATGGCTTGATCG 1129
Query 1143 ATCAGGGAAACAATTAATTCAGTGGCCGGTTAGGGAAGTTGAAAGATTACGTACAAAACA 1202
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1130 ATCAGGGAAACAATTAATTCAGTGGCCGGTTAGGGAAGTTGAAAGATTACGTACGAAACA 1189
Query 1203 AGTCAAAAACTTACGCAACAAAGTTCTAAAGTCAGGATCTAGGCTTGAAGTCTATGGTGT 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1190 AGTCAAAAACTTACGCAACAAAGTTCTAAAGTCAGGATCTAGGCTTGAAGTCTATGGTGT 1249
Query 1263 GACAGCTGCACAGGCGGATGTAGAAGTATTGTTCAAAGTGAGAGACTTGGAGAAAGCGGA 1322
||||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct 1250 GACAGCTGCACAGGCGGATGTGGAAGTTTTATTCAAAGTAAGAGACTTGGAGAAAGCGGA 1309
Query 1323 TGTGATAGAACCAAGTTGGACTGATCCGCAGTTGATTTGTAGCAAGATGAATGTATCGGT 1382
||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1310 TGTTATAAAACCAAGTTGGACTGATCCGCAGTTGATTTGTAGCCAGATGAATGTATCGGT 1369
Query 1383 TAAGTCTGGTTTAGGTCCATTCGGTTTAATGGTTTTGGCATCTAAGAATTTGGAAGAGTA 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1370 TAAGTCTGGTTTAGGTCCATTCGGTTTAATGGTTTTGGCATCTAAGAATTTGGAAGAGTA 1429
Query 1443 CACATCTGTTTATTTTAGAATCTTCAAAGCCCGTCAAAACAGCAATAAGTACGTTGTGCT 1502
|||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| |
Sbjct 1430 CACATCTGTTTATTTTAGAATCTTCAAAGCTCGTCAAAACAGCGATAAGTATGTTGTGGT 1489
Query 1503 CATGTGCAGTGACCAAAGCAGATCTTCGCTGAAGGAAGATAATGACAAAACGACATACGG 1562
||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct 1490 CATGTGCAGTGACCAAAGCAGATCTTCACTGGAGGAAGATAATGACAAAACGACCTACGG 1549
Query 1563 AGCTTTTGTGGATATTAATCCTCACCAACCACTATCCCTCAGAGCCTTGATTGATCATTC 1622
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1550 AGCTTTTGTGGATATTAATCCTCACCAACCACTATCCCTCAGATCCTTGATTGATCATTC 1609
Query 1623 AGTAGTGGAGAGTTTCGGTGGAAAGGGAAGAGCATGCATTACCTCAAGAGTGTATCCAAA 1682
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1610 TGTAGTGGAGAGTTTTGGTGGAAAGGGGAGAGCATGCATTACCTCAAGAGTGTATCCAAA 1669
Query 1683 ATTGGCAATAGGAAAAAGTTCACATCTCTTTGCTTTTAATTATGGATATCAAAGTGTTGA 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1670 ATTGGCAATAGGAAAAAGTTCACATCTCTTTGCTTTTAATTATGGATATCAAAGTGTTGA 1729
Query 1743 TGTCTTAAACTTAAATGCTTGGAGCATGAACTCTGCCCAAATCAGTTGATCACGTAA--- 1799
| |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1730 TCTCTTAAACCTAAATGCTTGGAGCATGAACTCTGCTCAAATCAGTTGATCAAGTAACGG 1789
Query 1800 --AGATA----CACACATGTAAACAC--A--TTACATCTCCATTGATTTAGCATTTATAT 1849
||||| ||||||||||||||| | ||| |||||||||||||||||||||||||
Sbjct 1790 GGAGATAGATACACACATGTAAACACGTACATTATATCTCCATTGATTTAGCATTTATAT 1849
Query 1850 GAGTTGATTTTGGAGAGATCTTATATGGTCCACTTTGTTTGGTTGTCAATAAAATTGTCC 1909
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1850 GAGTTGATTTTGGAGAGATCTTATATGGTCCACTTTGTTTGGTTGTCAAAAAAATGGTCC 1909
Query 1910 AATTTGTTTGTTTGAAATAATTCTAAAAGGCTAATATATATGACATTTTATTTG 1963
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1910 AATTTGTTTGTTTGAAATAATTCTAAAAGGCTA-TATATATGACATTTTATTTG 1962
> Ahg474565 jgi|Araly1|474565|fgenesh2_kg.1__4519__AT1G55120.1
Length=1824
Score = 713 bits (386), Expect = 0.0
Identities = 1275/1684 (76%), Gaps = 141/1684 (8%)
Strand=Plus/Plus
Query 178 AACCAGCCCTACCGGACCGGTT-TCCA-TTTCCAACC-CCCCAAAAATTGGATGAACGAT 234
||||| || ||||| ||||||| | || ||| ||||| |||| ||||||||||||||||
Sbjct 119 AACCAACCGTACCGAACCGGTTAT-CACTTT-CAACCTCCCC-GAAATTGGATGAACGAT 175
Query 235 CCTAATGGGCCTATGATATACAAAGGAATATATCATCTTTTCTACCAATGGAACCCGA-A 293
|||||||| || |||||||||||||||||||| |||||||| ||||||| || || | |
Sbjct 176 CCTAATGGACCAATGATATACAAAGGAATATACCATCTTTTTTACCAATATAATCC-ATA 234
Query 294 AGGAGCCGTGTGGG--GTAA-CATCGTGTGGGCTCATTCCACGTCAACAGACTTAATCAA 350
|| ||||| |||| |||| ||||| |||| || ||||||||| |||||| ||||
Sbjct 235 CGGTGCCGTTTGGGATGTAAGAATCGTATGGGGACACTCCACGTCAGTTGACTTAGTCAA 294
Query 351 TTGGGA-TCCACATCCTCCAGC-TATCTTCCCATCTGCACCCTTC-GATATCAACGGATG 407
| ||| | |||| |||||||| | | | |||||| || || || |||| |||||| ||
Sbjct 295 CT-GGATTTCACAACCTCCAGCTTTTAAT-CCATCT-CAGCCGTCAGATACCAACGGCTG 351
Query 408 CTGGTCCGGTTCAGCT-ACTATTCTCCCTAATGGAAAACCGGTTATCCTCTATACCGGAA 466
||||| || || | | || ||||| || || || ||||| || |||||||| ||||| |
Sbjct 352 TTGGTCAGGCTCCG-TCACGATTCTACCAAACGGCAAACCTGTGATCCTCTACACCGGCA 410
Query 467 TCGACCCTAAGAAC-CAA--CAGGTCCAAAACATAGCCGAGCCTAAGAATCTCTCCGATC 523
| || || || ||| || || ||||||||| | |||| || ||| | |||||||
Sbjct 411 TTGA-CC-AA-AACAAAAGTCAAGTCCAAAACGTCGCCGTTCCGGTTAATGTTTCCGATC 467
Query 524 CTTATCTCCGAGAATGG-AAAAAGTCGCCGTTAAATCCTCTCATGGCTCCTGACGCCGTT 582
||||||||||| ||||| |||| ||||| ||||||||| ||| | ||| |||| ||
Sbjct 468 CTTATCTCCGACAATGGTCAAAA-CCGCCGCGAAATCCTCTTATGACACCTAACGCGGTA 526
Query 583 AACGGAATCAACGCCAG-CTC-GTTCCGTGACCCAACCACCGCGTGGCTAGGCCAAGACA 640
|||||||| ||| || | | | |||||| || || |||||||||||||| || | |||
Sbjct 527 AACGGAATTAAC-CCGGAC-CGGTTCCGAGATCCGACCACCGCGTGGCTTGGACGTGAC- 583
Query 641 AG-AAATGGAGAGTGATCATCGGAAG---CA-AGATTC-ACCGTCGTGGACTAGCCATTA 694
| ||||| |||||||| ||||||| || || | | ||||| || ||||||||
Sbjct 584 GGTGAATGGCGAGTGATCGTCGGAAGCTCCACGGA--CGATCGTCGAGGGTTAGCCATT- 640
Query 695 C-TTAC-ACGAGTAAAGACTTTCTAAAATGGGA-AAAATC-TCCAGAGCCGTTGCATTAC 750
| |||| || || ||||| ||||| ||| ||| |||| | | | || |||||||||
Sbjct 641 CTTTACAAC-AGCAAAGA-TTTCTTCAATTGGACGCAATCGACGA-ATCCTTTGCATTAC 697
Query 751 GACGACGGAAGTGGAATGTGGGAATGTCCTGATTTTTTCCCGGTCACGAGGTTTGGTTCT 810
|| ||| || |||||||||||||||||||||||||||||||| ||| || ||
Sbjct 698 GAAGACTTAACCGGAATGTGGGAATGTCCTGATTTTTTCCCGGTTTCGATAACCGGATC- 756
Query 811 A-ACGGCGTGGAAACGTCTTCGTTTGGTGAACCTAATGAGATTTTGAAGCACGTG-TTGA 868
| |||| || |||||||| |||||| |||| |||| |||| ||||| ||| || |
Sbjct 757 AGACGGTGTTGAAACGTCGTCGTTTAGTGAG---AATGGGATT---AAGCATGTGCTT-A 809
Query 869 AAATAAGTTTGGAC-GACACGAAA-CATGATTATTACACGATTGGTACGT-ACGATCGGG 925
|| | |||||| | || || | |||||||||||||||||||| | || | ||||| |
Sbjct 810 AAGTGAGTTTG-ATTGAGAC-ATTGCATGATTATTACACGATTGGGA-GTTATGATCGTG 866
Query 926 TTAAAGATAAATT-CGTACCGGA-CAATGG-TTT---CAAGATGGACGGTACGGCTCCGA 979
|||||| || ||||||||| | ||| ||| ||| | ||| | |||||||||
Sbjct 867 AGAAAGATGT-TTACGTACCGGATCT-TGGGTTTGTGCAAAACGGA---T-CGGCTCCGA 920
Query 980 GAT-ACGATTACGG-AAAGTATTACGCGTCTAAAACGTTTTTTGACTCG--GCTAAGAAC 1035
| | | |||||||| ||| ||||||||||| |||||||||| || | | | ||||||
Sbjct 921 GGTTA-GATTACGGGAAA-TATTACGCGTCGAAAACGTTTTACGA-T-GATGTTAAGAAA 976
Query 1036 CGGAGAATCTTGTGGGGTTGGACTAACGAGTCATCGTC-GGTTGAGGATGATGTTGAGAA 1094
|| |||||||||||||||||| ||| || || || || || | | |||||| || ||||
Sbjct 977 CGAAGAATCTTGTGGGGTTGGGTTAATGAATCGTC-TCCGGCTAAAGATGATATTAAGAA 1035
Query 1095 AGGCTGGTCCGGTATTCAGACGATT-CCAAGGAAAATATGGCTTGATAGA-TCAGGGAAA 1152
|| ||||| ||| ||||| | ||| || |||||||||||||| ||| || || ||||||
Sbjct 1036 GGGTTGGTCTGGTCTTCAGTC-ATTTCCGAGGAAAATATGGCTCGAT-GAATC-GGGAAA 1092
Query 1153 -CAATTAATTCAGTGGCCGGTT-AGG-GAAGTTGAAA-GATTACGTACAAAACAAGTCAA 1208
||||| | || ||||| || | | || |||| | | || ||| | ||||||| |
Sbjct 1093 GCAATTGCTGCAATGGCCTATTGAAGAGA--TTGAGACG-TTGCGTGGGACACAAGTCGA 1149
Query 1209 AAACTTACGCAACAAAGTTCT-AAAGTCAGGATCTAGGCTTGAAGT-CTATGGTGTGACA 1266
|| | ||| |||||||| |||| ||||||||| || |||| | ||||||| ||
Sbjct 1150 ---CTGGCACAAGAAAGTTCTCAAAG-CAGGATCTACTCTCCAAGTTC-ATGGTGTCACT 1204
Query 1267 GCTGCACAGGCGGATGTAGAAGTATTGTTCAAAGTGAGAGACTTGGAGAAAGCGGATGTG 1326
||||||||||| ||||| || |||| |||||| |||| ||| ||||| |||||||||||
Sbjct 1205 GCTGCACAGGCAGATGTTGAGGTATCGTTCAAGGTGAAAGAATTGGAAAAAGCGGATGTC 1264
Query 1327 ATAGAACCAAGTTGGACTGATCCGCAGTTGATTTGTAGCAA-G-ATGAATGTATCGGTTA 1384
|| ||||| ||||||||||| || || ||| || || | | | || | | |||||||
Sbjct 1265 ATTGAACCGAGTTGGACTGACCCACAAAAGATATGCAGTGACGGA-GATT-TGTCGGTTA 1322
Query 1385 AGTCTGGTTTAGGTCCATTCGGTTTAATGGTTTTGGCATCTAA-GA-ATTTGGAAGAGTA 1442
| || |||||||| ||||| ||||| |||||||||||||| || || || |||||||||
Sbjct 1323 ACTCCGGTTTAGGACCATTTGGTTTGATGGTTTTGGCATCCAAAGACAT--GGAAGAGTA 1380
Query 1443 CACATCTGTTTATTTTAGAATCTTCAAAGCCC---G-TCA-A--AACA-GCA-A-TAAGT 1492
||| || ||||| || ||||||||||| | | | | | | || | | | | |||||
Sbjct 1381 CACGTCCGTTTACTTCAGAATCTTCAA-GTCAAATGATGATACTAATAAGAATACTAAGT 1439
Query 1493 ACGTTGTGCTCATGTGCAGTGACCAAAGCAGATCTTCGCTGAAGGAAGATAATGACAAAA 1552
|||| ||| | ||||||||||||||||||||||| ||| |||| || || ||||| |||
Sbjct 1440 ACGTGGTGTTGATGTGCAGTGACCAAAGCAGATCATCGTTGAACGAGGAAAATGATAAAT 1499
Query 1553 CGACATACGGAGCTTTTGTGGATATTA-ATCCT-C--ACCAACCACTATCCCTCAGAGCC 1608
| || | || |||||||||| || | | ||| | ||||| || | || || || | |
Sbjct 1500 CAACGTTTGGTGCTTTTGTGGCGAT-AGACCCTTCTCACCAAACAGTTTCTCTTAG-GAC 1557
Query 1609 TT-GATTGATCATTCAGTAGTGGAGAGTT-TCGGTGGAA-AGG-GAAGAGCATGCATTAC 1664
|| ||||||||| ||| |||||||||||| | |||||| ||| | | | | || || ||
Sbjct 1558 TTTGATTGATCACTCAATAGTGGAGAGTTAT-GGTGGAGGAGGCGGA-A-CTTGTATAAC 1614
Query 1665 CTCAAGAGTGTATCCAAAATTGGCAATAGGA-AAAAGTTCACATCTCTTTGCTTTTAATT 1723
||||||||||||||||||||| ||||| ||| |||| | || |||| ||||| || ||
Sbjct 1615 CTCAAGAGTGTATCCAAAATTAGCAATTGGAGAAAA-TGCAAATCTTTTTGCCTTCAACA 1673
Query 1724 ATGGATA-TCAAAGTGTTGATGTCTTAAACTTAAATGCTTGGAGCATGAACTCTGCCCAA 1782
| ||| | ||||||||||||||| || | | ||| |||||||||| |||| ||||| |||
Sbjct 1674 AAGGA-ACTCAAAGTGTTGATGTATTGAGCCTAAGTGCTTGGAGCTTGAAGTCTGCTCAA 1732
Query 1783 ATCA 1786
||||
Sbjct 1733 ATCA 1736
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73818894810
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5