BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G13900.1
Length=3732
Score E
Sequences producing significant alignments: (Bits) Value
Ahg341522 jgi|Araly1|341522|fgenesh1_pg.C_scaffold_3001285 6211 0.0
Ahg474559 jgi|Araly1|474559|fgenesh2_kg.1__4513__AT1G54280.1 3755 0.0
Ahg920669 jgi|Araly1|920669|scaffold_101950.1 1055 0.0
> Ahg341522 jgi|Araly1|341522|fgenesh1_pg.C_scaffold_3001285
Length=3732
Score = 6211 bits (3363), Expect = 0.0
Identities = 3611/3734 (97%), Gaps = 4/3734 (0%)
Strand=Plus/Plus
Query 1 ATGGGGCGTCGTAGAATAAGATCAAGGATCCGGAAAAGCCATTTCTACACCTTTAAATGT 60
||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 1 ATGGGGCGTCGCAGAATAAGATCAAGGATCCGGAAAAGCCATTTTTACACCTTTAGATGT 60
Query 61 CTCAGACCAAAAACCCTAGAAGATCAAGGACCTCATATCATTAATGGACCTGGATACACG 120
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 61 CTCAGACCAAAAACCCTAGAAGATCAAGGACCCCATATCATTAATGGACCAGGATACACC 120
Query 121 AGAATTGTTCATTGTAACCAACCTCATTTGCATTTGGCTAAAGTCCTTAGGTACACTTCA 180
|||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||
Sbjct 121 AGAATTGTTCATTGTAACCAACCTCATTTGCACCTCGCTAAAGTCCTTAGGTACACCTCA 180
Query 181 AATTATGTGTCCACCACTAGGTATAATCTCATTACTTTCTTGCCCAAATGCTTGTATGAG 240
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 181 AACTATGTGTCCACCACTAGGTATAACCTCATCACTTTCTTGCCCAAATGCTTGTATGAG 240
Query 241 CAGTTCCACCGTGTTGCCAATTTCTACTTCCTCGTTGCTGCTATTCTCTCTGTCTTTCCT 300
|| ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct 241 CAATTCCACCGTGTTGCCAATTTCTACTTCCTTGTTGCTGCAATTCTCTCTGTGTTTCCT 300
Query 301 CTCTCCCCATTCAACAAATGGAGTATGATCGCTCCTTTGATTTTTGTGGTTGGGCTTAGT 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 301 CTCTCCCCATTCAACAAATGGAGTATGATCGCTCCTTTGATTTTTGTGGTCGGGCTTAGT 360
Query 361 ATGGGTAAAGAGGCGTTGGAGGATTGGCGGAGGTTTATGCAGGATGTGAAGGTGAATTCG 420
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 361 ATGGGTAAAGAGGCGTTAGAGGATTGGCGCCGGTTTATGCAGGATGTGAAGGTGAATTCC 420
Query 421 AGGAAAGCTACTGTTCACAGAGGGGATGGTGATTTTGGTCGTAGGAAGTGGAAGAAGTTA 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 AGGAAAGCCACTGTTCACAGAGGGGATGGTGATTTTGGTCGTAGGAAGTGGAAGAAGTTA 480
Query 481 CGTGTAGGGGATGTTGTAAAGGTGGAAAAGGATCAATTTTTCCCTGCTGATTTGCTCTTA 540
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CGTGTAGGGGATGTAGTCAAGGTGGAAAAGGATCAATTTTTCCCTGCTGATTTGCTCTTA 540
Query 541 TTGTCATCTAGTTATGAGGATGGGATCTGTTATGTGGAGACGATGAACTTAGATGGTGAA 600
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 541 CTGTCGTCTAGTTATGAGGATGGGATCTGTTATGTTGAGACGATGAACTTAGATGGCGAA 600
Query 601 ACCAACTTGAAAGTGAAA-AGATGTTTGGATGTTACTTTGCCTTTGGAACGGGATGATAC 659
|||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||||||
Sbjct 601 ACCAACTTGAAAGT-AAAGAGATGTTTGGATGTTACCTTGCCTCTGGAACGGGATGATAC 659
Query 660 TTTCCAGAGTTTCTCCGGAACTATCAAATGTGAAGATCCCAATCCTAACCTCTATACCTT 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 TTTCCAGAGTTTCTCCGGAACTATCAAATGTGAAGATCCCAATCCTAACCTCTATACCTT 719
Query 720 TGTTGGAAATCTTGAATATGACGGTCAGGTTTATCCGCTTGATCCTAGCCAGATTCTCTT 779
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 720 TGTTGGAAATCTTGAATATGATGGTCAGGTTTATCCCCTTGATCCTAGCCAGATTCTCTT 779
Query 780 GAGAGACTCAAAGCTCAGGAACACGTCTTATGTCTATGGGGTGGTGGTTTTTACTGGCCA 839
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 780 GAGAGACTCAAAGCTCAGGAACACGTCTTATGTCTATGGGGTGGTGATATTTACTGGCCA 839
Query 840 TGACACCAAAGTCATGCAGAATTCAACAAAATCCCCTTCAAAGAGAAGCAGAATCGAGAA 899
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 840 TGACACAAAAGTCATGCAGAATTCAACAAAATCCCCTTCAAAGAGAAGCAGAATTGAGAA 899
Query 900 GAGAATGGACTACATTATATATACTCTCTTTGCCCTCCTTGTGCTTGTCTCCTTCATCAG 959
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 900 GAGAATGGACTACATTATATATACTCTCTTTGCCCTCCTTGTGCTCGTCTCCTTCATCAG 959
Query 960 CTCATTGGGTTTTGCAGTGATGACAAAAATGCATATGGGAGATTGGTGGTACTTACGACC 1019
|||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 960 CTCACTGGGTTTTGCAGTTATGACAAAGGTGCATATGGGAGATTGGTGGTACTTACGACC 1019
Query 1020 GGATAAGCCTGAGCGGTTAACAAATCCAAGAAATCCTTTTCACGCTTGGGTCGTCCATCT 1079
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 AGACAAGCCTGAGCGCTTAACAAATCCAAGAAATCCTTTTCACGCTTGGGTCGTCCATCT 1079
Query 1080 GATCACTGCTGTCTTGCTTTATGGGTACTTGATTCCCATCTCATTGTATGTTTCCATCGA 1139
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1080 GATCACTGCTGTCTTGCTTTATGGGTACCTGATTCCCATCTCATTGTATGTTTCCATCGA 1139
Query 1140 GCTCGTAAAAGTTTTGCAGGCAACTTTCATAAACCAAGACTTGCAGATGTATGACAGCGA 1199
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1140 GCTCGTAAAAGTTTTGCAGGCAACTTTCATTAACCAAGACTTGCAGATGTATGATAGCGA 1199
Query 1200 GAGTGGGACTCCAGCTCAAGCACGTACATCGAATTTAAATGAAGAGCTGGGACAAGTTGA 1259
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1200 GAGTGGGACTCCAGCTCAAGCACGCACATCGAATTTGAATGAAGAGCTGGGACAAGTTGA 1259
Query 1260 CACAATCCTTTCCGATAAAACTGGAACTTTGACTTGTAACCAGATGGATTTTCTGAAATG 1319
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1260 CACAATCCTTTCCGATAAAACAGGAACTTTGACATGTAACCAGATGGATTTTCTGAAATG 1319
Query 1320 CTCCATTGCGGGTACTTCTTATGGTGTTCGAGCCAGTGAAGTGGAACTAGCTGCTGCAAA 1379
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1320 CTCCATTGCGGGTACTTCTTATGGTGTCCGAGCCAGTGAAGTAGAACTAGCTGCTGCAAA 1379
Query 1380 ACAAATGGCGATAGATCTCGACGAGGAGCAAGGTGAGGAAGTGACCCACCTTCCAAGGAC 1439
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1380 ACAAATGGCGATAGATCTCGATGAGGAGCAAGGTGAGGAAGTGACCCACCTTCCAAGGAC 1439
Query 1440 TAGAGGAAGGATGCATGGATATGCTAAAATGCCCAGCAAGACATCATCAGATATTGAGTT 1499
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 TAGAGGAAGGATGCATGGGTATGCTAAAATGCCCAGCAAGACATCATCAGATATTGAGTT 1499
Query 1500 GGAGACTGTAATCACTGCTACTGACGAAGGGGATCAGACCCAGTCCACTGGTATCAAGGG 1559
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 1500 GGAGACTGTAATCACTGCTATTGACGAAGGGGATCAGACACAGTCCACTGGTATCAAGGG 1559
Query 1560 TTTTAGTTTTGAGGATCAACGTCTCATGGGTGGAAACTGGTTAAATGAACCTAATTCAGA 1619
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 GTTTAGTTTTGAGGATCAACGTCTCATGGGTGGAAACTGGTTAAATGAACCTAATTCAGA 1619
Query 1620 TGACATTTTGATGTTTCTGCGTATACTTGCGGTTTGTCACACTGCTATCCCCGAGGTGGA 1679
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1620 TGACATTTTGATGTTTCTGCGTATACTGGCGGTTTGTCACACTGCTATTCCCGAGGTGGA 1679
Query 1680 TGAAGATACTGGAAAGTGTACTTATGAAGCAGAGTCTCCTGACGAAGTTGCTTTCCTTGT 1739
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1680 TGAAGATACTGGAAAGTGTACTTATGAAGCAGAGTCTCCTGATGAAGTTGCTTTCCTTGT 1739
Query 1740 TGCCGCTGGGGAGTTTGGTTTTGAGTTTACTAAAAGAACTCAATCAAGTGTGTTTATCAG 1799
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1740 TGCCGCTGGGGAGTTTGGTTTTGAGTTTACCAAAAGAACTCAATCAAGTGTGTTTATCAG 1799
Query 1800 TGAACGACATTCAGGCCAACCAGTTGAAAGAGAATATAAAGTTTTAAATGTTTTGGACTT 1859
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1800 TGAAAGACATTCAGGCCAACCAGTTGAAAGAGAATATAAGGTTTTAAATGTTTTGGACTT 1859
Query 1860 CACTAGCAAAAGAAAAAGAATGTCTGTTATCGTCCGTGATGAAAAAGGACAGATTCTTCT 1919
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1860 CACTAGCAAAAGAAAAAGAATGTCTGTTATTGTCCGTGATGAAAAAGGGCAGATTCTTCT 1919
Query 1920 ACTCTGTAAAGGTGCTGACAGCATAATATTTGAACGGTTATCCAAGAATGGAAAAAATTA 1979
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1920 ACTTTGTAAAGGTGCTGACAGCATAATATTTGAACGATTATCCAAGAATGGAAAAAATTA 1979
Query 1980 TCTGGAAGCCACTTCAAAGCATTTGAATGGATACGGTGAAGCTGGTTTACGCACATTGGC 2039
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1980 TCTGGAAGCCACTTCAAAGCATTTGAATGGATATGGTGAAGCTGGTTTACGCACATTGGC 2039
Query 2040 ACTCAGTTATAGAAAGCTGGATGAGACCGAGTATTCGATATGGAACAGTGAATTTCACAA 2099
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 GCTCAGTTATAGAAAGCTGGATGAGACCGAGTATTCGATATGGAACAGTGAATTTCACAA 2099
Query 2100 AGCCAAAACTTCAGTCGGAGCTGACAGAGATGAAATGCTCGAAAAGGTATCTGACATGAT 2159
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2100 AGCCAAAACGTCAGTCGGAGCTGACAGAGATGAAATGCTCGAAAAGGTATCTGATATGAT 2159
Query 2160 GGAGAAGGAATTGATTCTTGTCGGTGCTACTGCAGTGGAAGACAAACTGCAGAAAGGGGT 2219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2160 GGAGAAGGAATTGATTCTTGTCGGTGCTACTGCAGTGGAAGACAAACTGCAGAAAGGGGT 2219
Query 2220 GCCTCAATGCATAGATAAACTTGCCCAAGCTGGTCTTAAGATATGGGTTTTGACAGGAGA 2279
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 TCCTCAATGCATAGATAAACTTGCCCAAGCTGGTCTTAAGATATGGGTTTTGACAGGAGA 2279
Query 2280 TAAGATGGAGACAGCAATTAACATAGGATATGCCTGCAGTTTGCTGAGACAGGGTATGAA 2339
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2280 TAAGATGGAGACAGCGATTAACATAGGATATGCCTGCAGTTTGCTGAGACAGGGTATGAA 2339
Query 2340 GCAGATATACATAGCTCTAAGAAATGAAGAGGGATCATCCCAAGACCCAGAAGCAGCTGC 2399
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2340 GCAGATATACATAGCACTAAGAAATGAAGAGGGATCATCCCAAGACCCAGAAGCTGCTGC 2399
Query 2400 GAGAGAGAACATTTTGATGCAAATCATAAATGCTTCACAGATGATCAAACTAGAGAAGGA 2459
||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2400 AAGAGAGAGCATTTTGATGCAGATCATAAATGCTTCACAGATGATCAAACTAGAGAAGGA 2459
Query 2460 TCCACATGCAGCGTTTGCTTTGATCATTGATGGAAAGACACTTACATATGCTTTGGAGGA 2519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2460 TCCACATGCAGCGTTTGCTTTGATCATTGATGGAAAGACACTTACATATGCTTTGGAGGA 2519
Query 2520 TGATATTAAGTATCAGTTTCTTGCCCTGGCAGTTGACTGTGCTTCAGTGATATGCTGTCG 2579
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2520 TGATATCAAGTATCAGTTTCTTGCCCTGGCAGTTGACTGTGCTTCAGTGATATGCTGTCG 2579
Query 2580 TGTCTCTCCCAAGCAGAAAGCGCTTGTAACAAGACTAGCAAAAGAAGGAACAGGAAAGAC 2639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2580 TGTCTCTCCCAAGCAGAAAGCGCTTGTAACAAGACTAGCAAAAGAAGGAACAGGAAAGAC 2639
Query 2640 GACCTTGGCAATTGGTGATGGTGCAAATGATGTTGGAATGATTCAAGAAGCCGATATAGG 2699
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2640 AACCTTGGCAATTGGTGATGGTGCAAATGATGTTGGAATGATTCAAGAGGCCGATATAGG 2699
Query 2700 TGTAGGCATCAGTGGCGTGGAAGGCATGCAGGCTGTAATGGCAAGCGACTTCTCCATAGC 2759
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2700 TGTAGGCATCAGTGGCGTGGAAGGCATGCAGGCTGTAATGGCGAGCGACTTCTCCATAGC 2759
Query 2760 CCAATTTCGGTTTCTAGAGAGACTACTTGTTGTCCATGGGCACTGGTGCTACAAAAGAAT 2819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2760 CCAATTTCGGTTTCTAGAGAGACTACTTGTTGTCCATGGGCACTGGTGCTACAAAAGAAT 2819
Query 2820 AGCCCAGATGATCTGTTACTTCTTCTACAAGAACATAACATTTGGTCTGACTCTCTTCTA 2879
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2820 AGCCCAGATGATCTGTTACTTCTTCTACAAGAACATAACATTTGGTCTAACTCTCTTCTA 2879
Query 2880 CTTCGAGGCTTTCACCGGGTTTTCTGGTCAAGCCATATACAACGACTCCTACTTGTTGCT 2939
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2880 CTTTGAGGCTTTCACCGGGTTTTCTGGTCAAGCCATATACAACGACTCCTACTTGTTGCT 2939
Query 2940 GTTTAACGTTATTCTCACATCTCTCCCTGTCATCGCCCTTGGAGTTTTTGAGCAAGACGT 2999
||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct 2940 GTTCAACGTTATTCTCACCTCTCTCCCTGTCATCGCCCTCGGAGTTTTCGAGCAAGACGT 2999
Query 3000 GTCTTCAGAAGTCTGCTTACAGTTCCCAGCACTGTACCAGCAAGGCCCCAAGAACCTGTT 3059
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3000 GTCTTCAGAAGTCTGCTTACAGTTCCCTGCACTGTACCAGCAAGGCCCCAAGAACCTGTT 3059
Query 3060 CTTTGACTGGTACAGAATCATCGGGTGGATGGCAAATGGAGTCTATGCATCCGTAGTCAT 3119
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 3060 CTTTGACTGGTACAGAATCCTCGGGTGGATGGGAAATGGAGTCTATGCATCCGTAGTCAT 3119
Query 3120 ATTTT-CCCTCAACATTGGCATCTTTCATGTCCAATCTTTCTGTTCTGGTGGCCAAACAG 3178
|||| |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 3120 -TTTTGCCCTGAACATTGGCATCTTCCATGTCCAATCATTCTGTTCTGGTGGCCAAACAG 3178
Query 3179 CAGACATGGACGCAATGGGAACTGCAATGTTCACGTGCATCATCTGGGCAGTGAACGTAC 3238
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 3179 CAGACATGGACGCAATGGGAACCGCAATGTTCACTTGCATCATCTGGGCAGTGAACGTAC 3238
Query 3239 AGATAGCTTTAACCATGAGCCATTTCACATGGATCCAACACGTCTTGATCTGGGGAAGTA 3298
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 AAATAGCGTTAACCATGAGCCATTTCACATGGATCCAACACGTCTTGATCTGGGGAAGTA 3298
Query 3299 TCGTCACCTGGTACATCTTCCTTGCCCTATTTGGCATGTTACCTCCAAAAGTCTCAGGAA 3358
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3299 TCGTCACCTGGTACATCTTCCTTGCCCTCTTTGGCATGTTACCTCCAAAAGTCTCAGGAA 3358
Query 3359 ACATCTTCCACATGCTCTCGGAAACCCTAGCACCTGCACCAATCTTCTGGCTTACCTCAC 3418
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3359 ACATCTTCCACATGCTCTCCGAAACCCTAGCACCTGCACCAATCTTCTGGCTTACCTCAC 3418
Query 3419 TGCTGGTCATAGCCGCCACAACACTCCCCTACTTGGCTTACATTTCGTTCCAGAGATCGT 3478
||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||
Sbjct 3419 TGCTGGTCATAGCCGCCACAACACTTCCTTACTTGGCTCACATTTCGTTCCAGAGATCGT 3478
Query 3479 TAAACCCTCTGGACCATCACATCATCCAAGAGATCAAGCATTTCAGAATCGACGTCCAGG 3538
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct 3479 TAAACCCTCTGGACCATCACATCATTCAAGAGATCAAGCATTTCAGAATTGATGTCCAGG 3538
Query 3539 ACGAATGTATGTGGACGAGGGAAAGATCAAAGGCTAGAGAGAAGACCAAGATTGGAGTGA 3598
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3539 ACGAACGTATGTGGACGAGGGAAAGATCAAAGGCTAGAGAGAAGACCAAGATTGGAGTCA 3598
Query 3599 CAGCTCGTGTTGATGCCAAGATCCGCCAGCTGAGAGGAAGGCTCCAGAGAAAACACTCCA 3658
|||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| |
Sbjct 3599 CAGCTCGTGTGGATGCCAAGATCCGCCAGCTGAGAGGGAGGCTCCAAAGAAAACACTCTA 3658
Query 3659 TATTGAGCGTTATGAGCGGTCTGAGTGGCGTCTCAGCATCAACTGATACAACTTCCACCA 3718
| ||||| |||||||||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct 3659 TTTTGAGTGTTATGAGCGGTATGAGTGGCGTTTCAGCATCAACTGATACAACCTCCACCA 3718
Query 3719 CACAACATAGTTGA 3732
||||||||||||||
Sbjct 3719 CACAACATAGTTGA 3732
> Ahg474559 jgi|Araly1|474559|fgenesh2_kg.1__4513__AT1G54280.1
Length=3729
Score = 3755 bits (2033), Expect = 0.0
Identities = 3168/3714 (85%), Gaps = 86/3714 (2%)
Strand=Plus/Plus
Query 7 CGTCGTAGAATAAGATCAAGGATCCGGAAAAGCCATTTCTACACCTTTAAATGTCTCAGA 66
||||||||||||||||||||||| || |||||||||||||| || ||| |||||| |||
Sbjct 7 CGTCGTAGAATAAGATCAAGGATTCGTAAAAGCCATTTCTATACATTTCGATGTCTTAGA 66
Query 67 CCAAAAACCCTAGAAGATCAAGGACCTCATATCATTAATGGACCTGGATACACGAGAATT 126
|| ||||| || |||||||||||||||||| | || ||||||||||| ||||| |||||
Sbjct 67 CCTAAAACTCTTGAAGATCAAGGACCTCATGTTATCAATGGACCTGGTTACACCAGAATC 126
Query 127 GTTCATTGTAACCAACCTCATTTGCATTTGG---CTAAAGTCCTTAGGTACAC-TTCAAA 182
|||||||||||||| |||||||||||||||| ||||| || |||||||| | ||||||
Sbjct 127 GTTCATTGTAACCAGCCTCATTTGCATTTGGCTTCTAAACTCATTAGGTAC-CGTTCAAA 185
Query 183 TTATGTGTCCACCACTAGGTATAATC-T-CATTACTTTCTTGCCCAAATGCTTGTATGAG 240
||||| ||||| |||||||| || | | | | |||||||| || ||||||||||| |||
Sbjct 186 CTATGTATCCACTACTAGGTACAA-CTTGC-TCACTTTCTTACCTAAATGCTTGTACGAG 243
Query 241 CAGTTCCACCGTGTTGCCAATTTCTACTTCCTCGTTGCTGCTATTCTCTCTGTCTTTCCT 300
|| |||||||| || || || ||||| |||||||||||||| ||||||||||||||||||
Sbjct 244 CAATTCCACCGCGTCGCAAACTTCTATTTCCTCGTTGCTGCCATTCTCTCTGTCTTTCCT 303
Query 301 CTCTCCCCATTCAACAAATGGAGTATGATCGCTCCTTTGATTTTTGTGGTTGGGCTTAGT 360
|| || || || ||||||||||| ||||| ||||||||| | || || || |||||||||
Sbjct 304 CTGTCTCCTTTTAACAAATGGAGCATGATTGCTCCTTTGGTATTCGTTGTCGGGCTTAGT 363
Query 361 ATGGGTAAAGAGGCGTTGGAGGATTGGCGGAGGTTTATGCAGGATG-TGAAGGTGAATTC 419
||||| ||||| || |||||||||||||| ||||||||||| || | || |||| |||||
Sbjct 364 ATGGGGAAAGAAGCCTTGGAGGATTGGCGAAGGTTTATGCAAGACGTTG-AGGTCAATTC 422
Query 420 GAGGAAAGCTACTGTTCACAGAGGGGA-TGGTGATTTTGGTCGTAGGAAGTGGAAGAAG- 477
|| ||||||| |||||||| | |||| ||| ||||||||||| ||| |||||| |||
Sbjct 423 AAGAAAAGCTAGTGTTCACA-AAGGGAGTGGAGATTTTGGTCGCAGGGCGTGGAA-AAGA 480
Query 478 TTACGTGTAGGGGATGTTGTAAAGGTGGA-AAAGGATC-AATTTTTCCCTGCTGATTTGC 535
| ||||| || ||| | |||| ||| || ||| || | | || ||||| ||||||||||
Sbjct 481 ATCCGTGTTGGAGATATCGTAAGGGTTGAGAAA-GA-CGAGTTCTTCCCCGCTGATTTGC 538
Query 536 TCTTATTGTCATCTAGTTATGAGGATGGGATCTGTTATGTGGAGACGATGAACTTAGATG 595
||||||||||||| ||||| ||||||||||| |||||||| ||||||||||| |||||||
Sbjct 539 TCTTATTGTCATCGAGTTACGAGGATGGGATTTGTTATGTTGAGACGATGAATTTAGATG 598
Query 596 GTGAAACCAACTTGAAAGTGAAAAGATGTTTGGATGTTACTTT-GCCTTTGGA-ACGGGA 653
||||||| ||||||||||| || ||||||||||||| |||||| | | ||||| | |||
Sbjct 599 GTGAAACTAACTTGAAAGTTAAGAGATGTTTGGATGCTACTTTAG-CATTGGAGA-AGGA 656
Query 654 TG-ATACTTTCCAGAGTTTCTCCGGAACTATCAAATGTGAAGATCCCAATCCTAACCTCT 712
|| || |||| |||| ||||| ||||| || ||||| |||||||| ||||| || || |
Sbjct 657 TGAATCCTTT-CAGAACTTCTCTGGAACGATAAAATGCGAAGATCCGAATCCGAATCTGT 715
Query 713 ATACCTTTGTTGGAAATCTTGAATATGACGGTCAGGTTTATCCGCTTGATCCTAGCCAGA 772
|||| |||||||| |||||||| | ||| || ||||||||||| |||||||||| |||||
Sbjct 716 ATACTTTTGTTGGTAATCTTGAGTGTGATGGCCAGGTTTATCCACTTGATCCTAACCAGA 775
Query 773 TTCTCTTGAGAGACTCAAAGCTCAGGAACACGTCTTATGTCTATGGGGTGGTGGTTTTTA 832
|||| ||||||||||||||||| ||||||||| ||||||| ||||| || ||||||||||
Sbjct 776 TTCTTTTGAGAGACTCAAAGCTTAGGAACACGGCTTATGTTTATGGTGTTGTGGTTTTTA 835
Query 833 CTGGCCATGACACCAAAGTCATGCAGAATTCAACAAAATCCCCTTCAAAGAGAAGCAGAA 892
||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct 836 CTGGCCATGACACAAAAGTAATGCAGAATTCAACAAAGTCTCCTTCAAAGAGAAGCAGGA 895
Query 893 TCGAGAAGAGAATGGACTACATTATATATACTCTCTTTGC-CCTC-CTTGTGCTTGTCTC 950
| || ||||||||||||||||||||||| ||||||||||| | || |||| | ||| ||
Sbjct 896 TTGAAAAGAGAATGGACTACATTATATACACTCTCTTTGCACTTCTCTTG-AC-TGTTTC 953
Query 951 CTTCATCAGCTCAT-TGGGTTTTGCAGTGATGACAAAA-ATGCATATGGGAGATTGGTGG 1008
|||||||||||| | |||| ||||| |||||||||||| | | |||| ||||||||||
Sbjct 954 CTTCATCAGCTC-TCTGGGATTTGCTGTGATGACAAAACTTTTA-ATGGCAGATTGGTGG 1011
Query 1009 TACTTACGACCGGATAAGCCTGAGCGGTTAACAAATCCAAGAAATCCTTT-TCACGCTTG 1067
|| || ||||| || ||||||||| | || |||||||| ||||||||| | |||||||
Sbjct 1012 TATTTGCGACCAGACAAGCCTGAGAGCTTGACAAATCCTTCAAATCCTTTGT-ACGCTTG 1070
Query 1068 GGTCGTCCATCTGATCACTGCTGTCTTGCTTTATGGGTACTTGATTCCCATCTCATTGTA 1127
||| || ||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||
Sbjct 1071 GGTTGTTCATTTGATCACTGCTCTCTTGCTTTATGGTTACTTGATTCCCATCTCGTTGTA 1130
Query 1128 TGTTTCCATCGAGCTCGTAAAAGTTTTGCAGGCAAC-TTTCATAAACCAAGACTTGCAGA 1186
||||||||||||| | || ||||| ||||| || || ||| ||||| ||||||||||| |
Sbjct 1131 TGTTTCCATCGAGGTAGTGAAAGTCTTGCAAGC-ACATTTTATAAATCAAGACTTGCA-A 1188
Query 1187 -TGTATGACAGCGAGAGTGGGACTCCAGCTCAAGCACGTACATCGAATTTAAATGAAGAG 1245
||||||| || |||||||||||||| ||||||||||| || |||||||| |||||||||
Sbjct 1189 TTGTATGATAGTGAGAGTGGGACTCCGGCTCAAGCACGCACGTCGAATTTGAATGAAGAG 1248
Query 1246 CTGGGACAAGTTGACACAATCCTTTCCGATAAAACTGGAACTTTGACTTGTAACCAGATG 1305
|||||||||||||| || |||||||| |||||||| ||||||||||| || || ||||||
Sbjct 1249 CTGGGACAAGTTGATACTATCCTTTCTGATAAAACAGGAACTTTGACATGCAATCAGATG 1308
Query 1306 GATTTTCTGAAATGCTCCATTGCGGGTACTTCTTATGGTGTTCGAGCCAGTGAAGTGGAA 1365
|| |||||||||||||| ||||||||||||||||| ||||| || ||||||||||| |||
Sbjct 1309 GACTTTCTGAAATGCTCAATTGCGGGTACTTCTTACGGTGTCCGTGCCAGTGAAGTAGAA 1368
Query 1366 CTAGCTGCTGCAAAACAAATGGCGATAGATCTCGACGAGGAGCAAGGTGAGGAAGTGACC 1425
||||||||||| || || |||||||| ||||| |||||| ||||||| ||||| ||
Sbjct 1369 CTAGCTGCTGCTAAGCAGATGGCGATGGATCT---TGAGGAGAAAGGTGAAGAAGTTACA 1425
Query 1426 CACCTTCCAAGGACTAGAGGAAGGATGCATGGATATGCT-AAAA-TGCCCAGCAAGACAT 1483
||||||| | || || || |||| || | || || |||| || | |||||||| |
Sbjct 1426 AACCTTCCTATGAATAAAGTCAGGACACAACGCTA--CTCAAAACTGGCTAGCAAGACGT 1483
Query 1484 CATCAGATATTGAGTTGGAGACTGTAATCACTGCTA-CTGACGAAGGGGATCAGACCCAG 1542
|||||||| |||| |||||||||||| ||||||||| | || ||| ||| | || |||
Sbjct 1484 CATCAGATTTTGAATTGGAGACTGTAGTCACTGCTAGC-GATGAAAAGGACCGGAAGCAG 1542
Query 1543 TCCACTGGTATCAAGGGTTTTAGTTTTGAGGATCAA-CGTCTCATGGGTGGAAACTGGTT 1601
||||||| | ||||| ||||||||||| ||| || ||| | ||| || |||||||||
Sbjct 1543 AACACTGGTGTTAAGGGGTTTAGTTTTGAAGAT-AACCGTTTAATGAATGAAAACTGGTT 1601
Query 1602 AAATGAACCTAATTCAGATGACATTTTGATGTTTCTGCGTATACTTGCGGTTTGTCACAC 1661
|||||| ||||||||||||||||||||||||||| | |||||||| |||||||| || ||
Sbjct 1602 AAATGAGCCTAATTCAGATGACATTTTGATGTTTTTCCGTATACTGGCGGTTTGCCATAC 1661
Query 1662 TGCTATCCCCGAGGTGGATGAAGATACTGGAAAGTGTACTTATGAAGCAGAGTCTCCTGA 1721
||||| || |||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct 1662 AGCTATTCCTGAGGTGGATGAAGATACTGGAATGTGTACTTATGAAGCTGAGTCTCCTGA 1721
Query 1722 CGAAGTTGCTTTCCTTGTTGCCGCTGGGGAGTTTGGTTTTGAGTTTACTAAAAGAACTCA 1781
|||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||
Sbjct 1722 TGAAGTTGCTTTCCTTGTTGCTTCTAGGGAGTTTGGTTTTGAGTTTACTAAGAGAACTCA 1781
Query 1782 ATCAAGTGTGTTTATCAG-TGAACGA----CA--TTCAGGCCAACCAGTTGAAAGAGAAT 1834
||||||||||||||| || ||||||| || |||||||||||||||||| ||||| |
Sbjct 1782 ATCAAGTGTGTTTAT-AGCTGAACGATTTTCATCTTCAGGCCAACCAGTTGATAGAGAGT 1840
Query 1835 ATAAAGTTTTAAATGTTTTGGACTTCACTAGCAAAAGAAAAAGAATGTCTGTTATCGTCC 1894
| ||| | |||||| | || |||||||| |||||||||||||||||||||| || |||
Sbjct 1841 ACAAAATCTTAAATCTGTTAGACTTCACCAGCAAAAGAAAAAGAATGTCTGCCATTGTCA 1900
Query 1895 GTGATGAAAAAGGACAGATTCTTCTACTCTGTAAAGGTGCTGACAGCATAATATTTGAAC 1954
| ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||| |
Sbjct 1901 GAGATGAGGAAGGACAGATTCTTCTTCTCTGTAAAGGCGCTGACAGCATAATATTTGACC 1960
Query 1955 GGTTATCCAAGAATGGAAAAAATTATCTGGAAGCCACTTCAAAGCATTTGAATGGATACG 2014
| ||||| |||||||||||| | ||||||| ||| ||||| ||||| ||||||| |||||
Sbjct 1961 GTTTATCAAAGAATGGAAAAGAGTATCTGGGAGCTACTTCCAAGCACTTGAATGAATACG 2020
Query 2015 GTGAAGCTGGTTTACGCACATTGGCACTCAGTTATAGAAAGCTGGATGAGACCGAGTATT 2074
||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 2021 GTGAAGCAGGTTTACGCACATTGGCACTCGGTTACAGAAAGCTGGATGAGACCGAGTATT 2080
Query 2075 CGA-TATGGAACAGTGAATTTCACAAAGCCAAAACTTCAGTCGGAGCTGACAGAGATGAA 2133
| | |||||||| ||| ||||||||||||||||||||||| |||||||| |||||||||
Sbjct 2081 C-AGCATGGAACACTGAGTTTCACAAAGCCAAAACTTCAGTTGGAGCTGATAGAGATGAA 2139
Query 2134 ATGCTCGAAAAGGTATCTGACATGATGGAGAAGGAATTGATTCTTGTCGGTGCTACTGCA 2193
|||||||| ||||| || || ||||||||||||||| |||| ||||| || ||||||||
Sbjct 2140 ATGCTCGAGAAGGTTTCAGATATGATGGAGAAGGAACTGATCCTTGTTGGAGCTACTGCT 2199
Query 2194 GTGGAAGACAAACTGCAGAAAGGGGTGCCTCAATGCATAGATAAACTTGCCCAAGCTGGT 2253
||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 2200 GTGGAGGACAAACTGCAAAAAGGGGTGCCTCAATGCATAGATAATCTTGCCCAAGCTGGT 2259
Query 2254 CTTAAGATATGGGTTTTGACAGGAGATAAGATGGAGACAGCAATTAACATAGGATATGCC 2313
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2260 CTCAAGATATGGGTTTTGACAGGAGATAAGATGGAGACAGCAATAAACATAGGATATGCC 2319
Query 2314 TGCAGTTTGCTGAGACAGGGTATGAAGCAGATATACATAGCTCTAAGAAATGAAGAGGGA 2373
|||||||| ||| ||||||||||||||||||||| ||| | || | ||||| ||||| |
Sbjct 2320 TGCAGTTTACTGCGACAGGGTATGAAGCAGATATGCATTTCACTTACAAATGTAGAGGAA 2379
Query 2374 TCATCCCAAGACCCAGAAGCAGCTGCGAGA-GAGAACATTTTGATGCAAATCATAAATGC 2432
||||| ||| || | ||||| ||||| | | |||| |||||||||||| |||| ||||||
Sbjct 2380 TCATCACAAAACTCTGAAGCTGCTGC-AAAGGAGAGCATTTTGATGCAGATCACAAATGC 2438
Query 2433 TTCACAGATGATCAAACTAGAGAAGGATCCACATGCAGCGTTTGCTTTGATCATTGATGG 2492
|||||||||||| ||| | || ||||||||||||||||| ||||||||||||||||||||
Sbjct 2439 TTCACAGATGATTAAAATTGAAAAGGATCCACATGCAGCATTTGCTTTGATCATTGATGG 2498
Query 2493 AAAGACACTTACATATGCTTTGGAGGATGATATTAAGTATCAGTTTCTTGCCCTGGCAGT 2552
|||||||||||||||||||||| |||||||| | ||||||||||| |||||||| |||||
Sbjct 2499 AAAGACACTTACATATGCTTTGAAGGATGATGTCAAGTATCAGTTCCTTGCCCTTGCAGT 2558
Query 2553 TGACTGTGCTTCAGTGATATGCTGTCGTGTCTCTCCCAAGCAGAAAGCGCTTGTAACAAG 2612
|||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct 2559 GGACTGTGCATCAGTGATCTGCTGTCGTGTCTCTCCCAAACAGAAAGCACTTGTAACAAG 2618
Query 2613 ACTAGCAAAAGAAGGAACAGGAAAGACGACCTTGGCAATTGGTGATGGTGCAAATGATGT 2672
||||| ||||||||||||||||| || || |||||||||||||||||||||||||| ||
Sbjct 2619 GCTAGCCAAAGAAGGAACAGGAAAAACAACTTTGGCAATTGGTGATGGTGCAAATGACGT 2678
Query 2673 TGGAATGATTCAAGAAGCCGATATAGGTGTAGGCATCAGTGGCGTGGAAGGCATGCAGGC 2732
|||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||||
Sbjct 2679 TGGAATGATTCAAGAAGCTGATATTGGTGTTGGCATCAGTGGCGTTGAAGGCATGCAGGC 2738
Query 2733 TGTAATGGCAAGCGACTTCTCCATAGCCCAATTTCGGTTTCTAGAGAGACTACTTGTTGT 2792
|||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 2739 TGTAATGGCAAGTGACTTCTCCATAGCTCAATTTCGGTTTCTCGAGAGACTACTTGTTGT 2798
Query 2793 CCATGGGCACTGGTGCTACAAAAGAATAGCCCAGATGATCTGTTACTTCTTCTACAAGAA 2852
||| || || |||||||||||| |||||||||||||||| ||||| ||||||||||||||
Sbjct 2799 CCACGGACATTGGTGCTACAAACGAATAGCCCAGATGATTTGTTATTTCTTCTACAAGAA 2858
Query 2853 CATAACATTTGGTCTGACTCTCTTCTACTTCGAGGC-TTTCACCGGGTTTTCTGGTCAAG 2911
|||||| |||||||| ||||||||||||||||| || ||| ||||||||||||||||||
Sbjct 2859 CATAACCTTTGGTCTAACTCTCTTCTACTTCGAAGCCTTT-ACCGGGTTTTCTGGTCAAT 2917
Query 2912 CCATATACAACGACTCCTACTTGTTGCTGTTTAACGTTATTCTCACATCTCTCCCTGTCA 2971
| |||||||| ||||||||||| || || || |||||| ||||||| |||||||| ||||
Sbjct 2918 CAATATACAATGACTCCTACTTATTACTCTTCAACGTTGTTCTCACTTCTCTCCCGGTCA 2977
Query 2972 TCGCCCTTGGAGTTTTTGAGCAAGACGTGTC-TTCAGAAGTCTGCTTACAGTTCCCAGCA 3030
| |||| ||||||||||| ||||| || || ||| || ||||||||||||||||| |||
Sbjct 2978 TTTCCCTCGGAGTTTTTGAACAAGATGT-TCCTTCTGATGTCTGCTTACAGTTCCCTGCA 3036
Query 3031 CTGTACCAGCAAGGCCCCAAGAACCTGTTCTTTGACTGGTACAGAATCATCGGGTGGATG 3090
|||| || || |||||||||||||| ||||| ||||||||||||||| | || ||||||
Sbjct 3037 TTGTATCAACAGGGCCCCAAGAACCTCTTCTTCGACTGGTACAGAATCCTTGGATGGATG 3096
Query 3091 GCAAATGGAGTCTATGCATCCGTAGTCATATTTTCCCTCAACATTGGCATCTTTCATGTC 3150
| |||||||| || |||||| ||||||| ||| | || ||| |||| ||||| ||||||
Sbjct 3097 GGGAATGGAGTTTACGCATCCATAGTCATCTTTGCACTGAACCTTGGAATCTTCCATGTC 3156
Query 3151 CAATCTTTCTGTTCTGGTGGCCAAACAGCAGACATGGACGCAATGGGAACTGCAATGTTC 3210
||||| ||| | || | ||||||||| ||||||||| | || |||||||| || ||||||
Sbjct 3157 CAATCATTCCGCTCAGATGGCCAAACCGCAGACATGAATGCTATGGGAACCGCCATGTTC 3216
Query 3211 ACGTGCATCATCTGGGCAGTGAACGTACAGATAGCTTTAACCATGAGCCATTTCACATGG 3270
|| ||||||||||||||||| || || || |||||| |||||||||| || ||||| |||
Sbjct 3217 ACATGCATCATCTGGGCAGTAAATGTTCAAATAGCTCTAACCATGAGTCACTTCACTTGG 3276
Query 3271 ATCCAACACGTCTTGATCTGGGGAAGTATCGTCACCT-GGTACATCTTCCTTGCCCTATT 3329
||||||||||| |||| |||||||| || | | || ||||| ||||||| || || ||
Sbjct 3277 ATCCAACACGTAATGATTTGGGGAAGCATAGG-AGCTTGGTACGTCTTCCTCGCTCT-TT 3334
Query 3330 T-GGCATGTTACCTCCAAAAG-TCTCAGGAAACATCTTCCACATGCTC-TCGGAAACCCT 3386
|| |||||||| |||| | |||| || |||||||| ||||||||| ||| | | ||
Sbjct 3335 ACGGTATGTTACCAGCAAA-GCTCTCCGGCAACATCTTTCACATGCTCGTCG-AGATTCT 3392
Query 3387 AGCACCTGCACCAATCTTCTGGCTTACCTCACTGCTGGTCATAGCCGCCACAACACTCCC 3446
||| ||||| || || ||||||||||| ||||| |||||||||||||||||||| || ||
Sbjct 3393 AGCCCCTGCTCCTATTTTCTGGCTTACTTCACTACTGGTCATAGCCGCCACAACGCTTCC 3452
Query 3447 CTACTTGG-CTTACATTTCGTTCCAGAGATC-GTTAAACCCTCTGGACCATCACATCATC 3504
|||||| | ||||||| | ||| ||||| || || |||||| ||||||||||| ||
Sbjct 3453 TTACTTGTTCC-ACATTTCATACCAAAGATCAGTGAA-CCCTCTTGACCATCACATTATA 3510
Query 3505 CAAGAGATCAAGCATTTCAGAATCGACGTCCAGGACGA-ATGTATGTGGA--CGAGGGAA 3561
|||||||| || |||||||| ||||| || |||| || | | ||||||| |||| |||
Sbjct 3511 CAAGAGATAAAACATTTCAGGATCGATGTAGAGGATGAGA-GAATGTGGAAACGAGAGAA 3569
Query 3562 AGATCAAAGGCTAGAGAGAAGACCAAGATTGGAGTG-ACAGCTCGTGTTGATGCCAAGAT 3620
| |||||||| ||||||||||| |||||||| || || ||||| || ||||| |||||
Sbjct 3570 -G-TCAAAGGCGAGAGAGAAGACAAAGATTGG-GTTCACGGCTCGGGTCGATGCTAAGAT 3626
Query 3621 CCGCCAGCTGAGAGGAAGGCTCCAGAGAAAACACTCCATATTGAGCGTTATGAG 3674
| | ||||| ||||| ||||| || || || || || | || || ||||||||
Sbjct 3627 CAGGCAGCTAAGAGGGAGGCTTCAAAGGAAGCATTCGGTGTTAAGTGTTATGAG 3680
> Ahg920669 jgi|Araly1|920669|scaffold_101950.1
Length=3692
Score = 1055 bits (571), Expect = 0.0
Identities = 1640/2143 (77%), Gaps = 125/2143 (6%)
Strand=Plus/Plus
Query 1551 TATCAAGGGTTTTAGTTTTGAGGATCA-ACGTCTCATGGGTGGAAACTGGTT-AAATGAA 1608
||| ||||| ||| |||| |||||| | || || |||| ||| || ||||| | | ||
Sbjct 1511 TATAAAGGGGTTTGGTTTCGAGGAT-ATCCGGCTAATGGATGGGAATTGGTTGAGA-GAG 1568
Query 1609 CCTA-ATTCAGATGACATTTTGATGTTTC-TGCGTATACTT-GCGGTTTGTCACACTGCT 1665
|| | || || ||||||||||| || ||| | || ||| || || |||||||||| |||
Sbjct 1569 CC-ACATACAAATGACATTTTGCTG-TTCTTTCGCATA-TTAGCTATTTGTCACACAGCT 1625
Query 1666 ATCCCCGAGGTGGATGAAGATACTGGAAAGTGTACTTATGAAGCAGAGTCTCCTGACGAA 1725
|| |||||| | | || || ||||| |||| ||||||||||||||||| || ||||||
Sbjct 1626 ATTCCCGAGCTTAACGAGGAGACTGGCAAGTACACTTATGAAGCAGAGTCACCAGACGAA 1685
Query 1726 G-TTGCTTTCCTTGTTGCCGCTGGGGAGTTTGGTTTTGAGTT-TACTAAAAGAACTCAAT 1783
| || |||| ||| ||| ||| | ||||||||||||| ||| | ||| ||||| ||||
Sbjct 1686 GCTT-CTTTTCTTACTGCTGCTAGTGAGTTTGGTTTTGTGTTCT-TTAAGAGAACCCAAT 1743
Query 1784 CAAGTGTGT-T-TATCAGTG-AACG--A-C--ATTCAGG-CCAACCAGTTGAAAGAGAAT 1834
|||| |||| | | ||| || || | | | |||||| | || | ||||||| || |
Sbjct 1744 CAAGCGTGTATGT-TCA-TGAAAGGTTATCTTCTTCAGGACAAATGA-TTGAAAGGGAGT 1800
Query 1835 ATAAAGTTTTAAATGTT-TTGGACTTCACTAGCAAAAGAAAAAGAATGTCTGTTA-TCGT 1892
|||||||| | ||| || |||||||||||||||||| |||| ||||||||| || | |
Sbjct 1801 ATAAAGTTCTGAAT-TTGTTGGACTTCACTAGCAAACGAAAGCGAATGTCTG-TAGTTAT 1858
Query 1893 CCGTGATGAAAAAGGACAGATTCTTCTACTCTGTAAAGGTGCTGACAGCATAATATTTGA 1952
|| || || |||| || |||||||| || || ||||| |||||||| || || |||||
Sbjct 1859 ACGAGACGAGGAAGGGCAAATTCTTCTGCTATGCAAAGGAGCTGACAGTATCATTTTTGA 1918
Query 1953 ACGGTTATCCAAGAAT-GGAAAAAATTATC-TGGAAGCC-ACTTCAAAGCATTTGAATGG 2009
|| || | || ||| ||||| | || | ||| | || || | |||||||| ||||
Sbjct 1919 GCGACTAGCTAAAAATGGGAAAGCA-TA-CTTGGGA-CCTACCACTAAGCATTTAAATGA 1975
Query 2010 ATACGGTGAAGCTGGTTTACGCACATTGGCAC--TCAGTTATAGAAAGCTGGATGA-GAC 2066
||| || ||||| || | || || | |||| ||| || |||||||| || || ||
Sbjct 1976 ATATGGAGAAGCAGGACTCCGTACCCTAGCACTTTCA--TACAGAAAGCTTGACGAGGA- 2032
Query 2067 CGAGTATTC-GATATGGAACAG-TGAATTTCACAAAGCCAAAACTTC-AGTCGGAGCTGA 2123
|| ||||| | | |||||| | ||| |||||||| ||||||||||| | | || ||||
Sbjct 2033 AGAATATTCAGCT-TGGAAC-GCTGAGTTTCACAAGGCCAAAACTTCTA-TAGGTTCTGA 2089
Query 2124 CAGAGATGAAATGCTCGAAAAGG-TATCTGACATGATGGAGAAGGA-ATTGATTCTTGTC 2181
|||||||| |||| | | ||| |||| || ||||| || || || || ||||||||
Sbjct 2090 TAGAGATGAGTTGCTTG-AGAGGATATCGGATATGATCGAAAAAGACCTT-ATTCTTGTA 2147
Query 2182 GGTGCTACTGCAGTGGAAGACAAACTGCAGAAAGGGGTGCCTCAATGCATAGATAAACTT 2241
||||| ||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||
Sbjct 2148 GGTGCAACTGCTGTGGAGGACAAACTCCAGAAAGGGGTGCCCCAATGCATTGATAAACTT 2207
Query 2242 GCCCAAGCTGGTCTTAAGA-TATGGGTTTTGACAGGAGATAAGATGGAGACAGCAATTAA 2300
||||||||||| || || | |||||||||| || || ||||||||||| |||||||||||
Sbjct 2208 GCCCAAGCTGGCCTCAA-ATTATGGGTTTTAACTGGGGATAAGATGGAAACAGCAATTAA 2266
Query 2301 CATAGGATATGCCTGCAGTTTGCTGAGACAGGGTATGAAGCAGATATACATAGCTCT-AA 2359
||| |||||| | || ||||| || | || || ||||| ||||||| |||| || |
Sbjct 2267 CATCGGATATTCGTGTAGTTTACTTCGGCAAGGCATGAAACAGATATGCATAACTGTGGT 2326
Query 2360 GAAATGAAGAGGGATCATCCCAAGACCCAGAAGCAGCTGCG-AGAGAGAACATTTTG-AT 2417
||| | ||| ||| ||| ||||| || || || || | || || || |||||| ||
Sbjct 2327 GAACT-CAGAAGGAGGATCTCAAGATGCA-AA--AGTTGTGAAG-GACAATATTTTGAAT 2381
Query 2418 GCAAATCATAAATGCT-TCACAGATGATCAAACTAGAGAAGGATCCACATGCAGCGTTTG 2476
||||||| ||| ||| | || ||| | || || ||||| |||||||| || || ||||
Sbjct 2382 -CAAATCACAAAAGCTGT-GCAAATGGTGAAGCTGGAGAAAGATCCACACGCTGCATTTG 2439
Query 2477 CTTTGATCATTGAT-GGAAAGACACTTACATATGCTTTGGAGGATGATATTAAGTATCAG 2535
|||||||||||||| ||||| || || || ||||| ||||||||||| || ||||| |||
Sbjct 2440 CTTTGATCATTGATGGGAAA-ACCCTAACGTATGCATTGGAGGATGAGATGAAGTACCAG 2498
Query 2536 TTTCTTGCCCTGGCAGTTGACTGTGCTTCAGTGATATGCTGTCGTGTCTCTCCCAAGCAG 2595
|||||||| |||| || || ||||| ||||| || ||||||||||| ||||| ||||||
Sbjct 2499 TTTCTTGCTTTGGCGGTCGATTGTGCGTCAGTCATTTGCTGTCGTGTGTCTCCAAAGCAG 2558
Query 2596 AAAGCGCTT-GTAACAAGACTAGCAAAAGAAGGAA-CAGGAAAGA-CGACCTTGGCAATT 2652
||||| || ||||| || ||| ||||| |||| | ||||| | | || ||||||||
Sbjct 2559 AAAGC-TTTGGTAACGAGGTTAGTTAAAGAGGGAACCGGGAAA-ATC-ACATTGGCAATA 2615
Query 2653 GGTGATGGTGCAAATGATGTTGGAATGATTCAAGAAGCCGATATAGGTGTAGGCATCAGT 2712
||||||||||| |||||||||||||||||||||||||| || || ||||| || || |||
Sbjct 2616 GGTGATGGTGCGAATGATGTTGGAATGATTCAAGAAGCTGACATTGGTGTTGGAATTAGT 2675
Query 2713 GGCGTGGAAGGCATGCAGGCTGTAATGGCAAGCGACTTCTCCATAGCCCAATTTCGGTTT 2772
|| || ||||| ||||||||||| |||||||| || || || || ||||| || || |||
Sbjct 2676 GGGGTTGAAGGAATGCAGGCTGTTATGGCAAGTGATTTTTCTATTGCCCAGTTCCGTTTT 2735
Query 2773 CTAGAGAGACTACTTGTTGTCCATGGGCACTGGTGCTACAAAAGAATAGCCCAGATGATC 2832
|| || ||| | || || || ||||| |||||||| |||||||||||||| || ||||||
Sbjct 2736 CTTGAAAGATTGCTCGTCGTTCATGGACACTGGTGTTACAAAAGAATAGCTCAAATGATC 2795
Query 2833 TGTTACTTCTTCTACAAGAACATAACATTTGGTCTGACTCTCTTCTACTTCGAGGCTTTC 2892
|| || ||||| |||||||||||| |||||||||| ||||||||||| || |||||||||
Sbjct 2796 TGCTATTTCTTTTACAAGAACATAGCATTTGGTCTCACTCTCTTCTATTTTGAGGCTTTC 2855
Query 2893 ACCGGGTTTTCTGGTCAAGCCA-TATACAACGACTCCTACTTGTTGCTGTTTAACGTTAT 2951
|||||||||||||| ||| || |||| || |||| |||| | || || || ||||| |
Sbjct 2856 ACCGGGTTTTCTGGGCAA-TCAGTATATAATGACTACTACCTATTACTCTTCAACGTCGT 2914
Query 2952 TCTCACATC-TCTCCCTGTCATCGCCCTTGGAGTTTTTGAGCAAGACGTGTCTTCAGAAG 3010
|| || || | | ||||| || ||||||||||| ||||| ||||| || || || | ||
Sbjct 2915 CCTTACTTCAT-TGCCTGTGATTGCCCTTGGAGTCTTTGAACAAGATGTTTCCTCTG-AG 2972
Query 3011 -TCTGCTTACAGTTCCCAGCACTGTACCAGCAAGGCCCCAAGAACCTGTTCTTTGACTGG 3069
|||| |||||||| || || ||||||| ||||| | || || || ||||||||||||
Sbjct 2973 ATCTGTTTACAGTTTCCTGCGTTGTACCAACAAGGGACGAAAAATCTCTTCTTTGACTGG 3032
Query 3070 TACAGAATCA-TCGGGTGGATGGCAAATGGAGTCTA-TGCATCCGTAGTCATATT-TTCC 3126
|| ||||| | | |||||||||| |||||| || || | | ||| | || ||||| || |
Sbjct 3033 TATAGAAT-ACTTGGGTGGATGGGAAATGGTGTGTACT-CCTCCCTTGTAATATTCTT-C 3089
Query 3127 CTCAACATTGGCATC-TTTCATGTCCAATCTTTCTG-TTCTGGTGGCCAAACAGCAGACA 3184
||||||||||| ||| ||| ||| ||||||||| | || |||||||||| || ||||
Sbjct 3090 CTCAACATTGGAATCATTT-ATGAGCAATCTTTCAGAGTC-AGTGGCCAAACTGCTGACA 3147
Query 3185 TGGACGCAATGGGAACTGCAATGTTCACGTGCATCATCTGGGCAGTGAACGTACAGATAG 3244
|||| || | || ||| | ||||| || ||||| || ||||| ||||| || || || |
Sbjct 3148 TGGATGCTGTTGGTACTACCATGTTTACCTGCATTATTTGGGCTGTGAATGTGCAAATCG 3207
Query 3245 CTTTAACCATGAGCCATTTCACATGGATCCAACACGTCTTGATCTGGGGAAGTATCG-TC 3303
|||| || |||| || ||||| ||||||||||||||||||||||||||||| || | |
Sbjct 3208 CTTTGACGGTGAGTCACTTCACTTGGATCCAACACGTCTTGATCTGGGGAAGCATTGGTT 3267
Query 3304 -ACCTGGTA-CATCTTCCTTGCCCTATTTGGCATGTTACCTCCAAAAGTCT--CAGGAAA 3359
| ||||| | | || |||| || | || ||| | ||||||| |||| |||| ||
Sbjct 3268 TA--TGGTATC-TGTTTGTTGCGCTCTACGGGATGATGCCTCCAA--GTCTTTCAGGCAA 3322
Query 3360 CATCT-TCCACATGCTC-TCGGAAACCCTAGCACCTGCACCAATCT-TCTGGCTTACCTC 3416
||||| | | || || | ||| | || || |||||||| || | | ||| | || |
Sbjct 3323 CATCTATAAA-ATTCTAGT-GGAGATACTTGCTCCTGCACCCATATAT-TGGATGGCCAC 3379
Query 3417 ACTGCTGGTCATAGCCGCC-ACAA-CACTCCCCTACTTGGCTTACATTTCGTTCCAGAGA 3474
| | |||||| || | | ||| | ||||| ||||| || |||| || ||||| |||
Sbjct 3380 ATTTTTGGTCACAGT-GACTACAGTC-CTCCCTTACTTTGCCCACATATCTTTCCAAAGA 3437
Query 3475 T-CGTTAAACCC-TCTGGACCATCACATCATCCAAGAGATCAAGCATTTCA-GA-ATCGA 3530
| | ||||| || | |||| ||||||||||| |||||||| || | | || || | ||
Sbjct 3438 TGC-TTAAATCCGT-TGGATCATCACATCATTCAAGAGATAAAATACTACAAGAGA--GA 3493
Query 3531 CGTCCAGGAC-GAATGTATGTGGACG-AGGGAAAG-ATCAAAGGCTA-GAGAGAAGACCA 3586
|| |||| ||| | |||||||| ||| | | | |||| || | |||||||||| |
Sbjct 3494 TGTGGAGGATAGAA-GAATGTGGACACAGG-AGCGTA-CAAAAGC-ACGAGAGAAGACAA 3549
Query 3587 AGATTGGAGTGACAGCTCGTGTTGATGCCAAGATCCGCCAGCT 3629
|||||||| | |||||| | |||||||| || ||| | |||||
Sbjct 3550 AGATTGGATTCACAGCTAGAGTTGATGCGAAAATCAGACAGCT 3592
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 141003307965
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5