BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G14070.1
Length=1932
Score E
Sequences producing significant alignments: (Bits) Value
Ahg929180 jgi|Araly1|929180|scaffold_301637.1 3000 0.0
Ahg474542 jgi|Araly1|474542|fgenesh2_kg.1__4496__AT1G54115.1 1631 0.0
> Ahg929180 jgi|Araly1|929180|scaffold_301637.1
Length=1981
Score = 3000 bits (1624), Expect = 0.0
Identities = 1838/1941 (95%), Gaps = 15/1941 (1%)
Strand=Plus/Plus
Query 1 ATGAGCGCGGTTAGTTTTCTTTACAGCTCGAAAACCCCCAAATTTCGAGGGGTTTTCAAT 60
||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 27 ATGAGCGCGGTGAGTTTTCTTTACAGCTCGAAAAACCCCAAATTTCGAGGGGCTTTCAAT 86
Query 61 GGGATTTGTGCTCTGGTTCTGTTTTGCTTCTTCTTTGATCGGAGCGA-ATTACTCAGAAA 119
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||
Sbjct 87 GGGATTTGTGCTCTGGTTCTGTTTTGCTTCTTCTTTGATCGGAGCGATATT-CTCAGGAA 145
Query 120 CCCTTTGTTAAGGAACGCGTCTTTCGTCAATGGTGGTAGTGGCTCAACCTCCGGAGGT-- 177
||||||||| |||||| | ||| ||||||||||||||||||||||||||||| |||||
Sbjct 146 CCCTTTGTTTAGGAACTCATCTCTCGTCAATGGTGGTAGTGGCTCAACCTCCCGAGGTAA 205
Query 178 A-TCACCCA--GTTT-ATGGTAATTCGTAGAAATGCGAGGCAAATTGAAACGAATGGTTC 233
| ||| | |||| | | ||||||||||||||| |||||||||||||||||||| |||
Sbjct 206 ATTCAATAATGGTTTCACGTTAATTCGTAGAAATGTGAGGCAAATTGAAACGAATGATTC 265
Query 234 TGGTAATAATAGCAGCTTGAGTAGCAGTAGTACTGTTTTATGCTCAGGGTTACACAAACA 293
||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 266 TGG---CAATAGCAGCTTGAGTAGCACTAGTACTGTTTTATTCTCAGGGTTACACAAACA 322
Query 294 CATGGGTTATGCTGATCAATGCGAGTTCTTAAAAGCAAACCCAATTTGTTCCCCTGATGG 353
||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 323 CATTGGTTATGCTGATCAATGCGACTTCTTAAAAGCAAATCCAATTTGTTCCCCTGATGG 382
Query 354 ATTCTTTGATTACCTCAGCTTCTTTTACTGCTCCTGTAGAGATTTCAGTATCTTGGGTTA 413
||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||
Sbjct 383 ATTCTTTGATTACCTCAACTTCTTCTACTGCTCCTGCAGAGATTTCAGTATCTTGGGTTA 442
Query 414 CATGATGTTAGGTGTTTGGCTTGTTGCTTTGTTTTATCTGTTGGGTAATACTGCTGCTGA 473
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 443 CATGATGTTGGGTGTTTGGCTTGTTGCATTGTTTTATCTGTTGGGTAATACTGCTGCTGA 502
Query 474 TTACTTTTGTTGTTCACTGGAGAAGCTTTCAAAGCTTTTGAGGCTGCCTCCAACTGTTGC 533
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 503 TTACTTTTGTTGTTCATTGGAGAAGCTTTCAAAGCTTTTGAGGCTACCTCCAACTGTTGC 562
Query 534 TGGTGTTACTTTACTTCCTCTTGGGAATGGAGCACCAGATGTGTTTGCTAGTATAGCTGC 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 563 TGGTGTTACTTTACTTCCTCTTGGGAATGGAGCACCAGATGTGTTTGCTAGTATAGCTGC 622
Query 594 TTTTGTTGGTACAGATAAAGGAGAAGTTGGTCTTAACAGCGTCTTGGGTGGTGCTGTGTT 653
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 623 TTTTGTTGGAACAGATAAAGGAGAAGTTGGTCTTAACAGCGTCTTGGGTGGTGCTGTGTT 682
Query 654 TGTTACTTCTGTTGTTGTAGGGATTGTTTCGCTTTGTGTTGCGGATAAGGAAGTCAAGAT 713
|||||||||||||||||| || |||||||| |||||||||||||||||||| ||||||||
Sbjct 683 TGTTACTTCTGTTGTTGTTGGCATTGTTTCCCTTTGTGTTGCGGATAAGGATGTCAAGAT 742
Query 714 CGATAAGAATTGCTTCATCAGAGACTTGAGTTTCTTCCTTTTCTCGCTTGTGTCTTTGCT 773
||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| |
Sbjct 743 CGATAAGAAATGCTTCATCAGAGACTTGAGTTTCTTCCTTTTCACGCTCGTGTCTTTGTT 802
Query 774 GGTGATTTTGATGGTTGGTAGAGTGACAGTCCGGATTGCCATCGCGTTTGTCTCAATATA 833
|||||||||||||||||||| ||||||||| |||||||||||||| |||||||| |||||
Sbjct 803 GGTGATTTTGATGGTTGGTAAAGTGACAGTACGGATTGCCATCGCCTTTGTCTCGATATA 862
Query 834 TGTGGTTTATGCTTTCCTTGTGGCAGCGAATGTGATTCTGAGAAAACATGCTAAGAGGTT 893
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 863 TGTGATTTATGCTTTCCTTGTGGCAGCGAATGTCATTCTGAGAAAACATGCTAAGAGGTT 922
Query 894 TAAACTAGAGGCTCTTACTCCTTTGCTACCTATGCAAGGAAGTGTGTTTTCCCCGAGTGT 953
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 923 TAAACTAGAGGCTCTTACTCCTTTGCTACCTATGCAAGAAAGCGTGTTTTCCCCGAGTGT 982
Query 954 TGGAGAGGATATGCCAATGAATACCCCCTTGATAGAAACTGAGACTGAGGATGGTCCACC 1013
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 983 TGGAGAGGATATGCCAATGAATACCCCCTTGATAGAAACTGACCCTGAGGATGGTCCACC 1042
Query 1014 TCGGCTACAGAGTCTTCCTCAGTGGATGTGGGCGTCAAATGTGGCCATCTATTCAAACCA 1073
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1043 TCGGCTACAGAGTCTTCCTCAGTGGATGTGGGCGTCAAATGTGGCCATCTATTCCAACCA 1102
Query 1074 TTTCGCAAAAGTTAGTGTACATGATGAAGACAGGCCACCTTGGGGATGGATTGATGACAC 1133
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1103 TTTCGCGAAAGTTAGTGTACATGATGAAGACAGGCCACCTTGGGGATGGATTGATGACAG 1162
Query 1134 TGCAGAAGTAGAGAGCTCCTCATGTACTAAATTCACTTCCTTGTTGGAAATTCCGCTGAC 1193
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1163 TGCAGAAGTTGAGAGCTCCTCATGTACTAAATTCACTTCCTTGTTGGAAATTCCGCTGAC 1222
Query 1194 CATTCCAAGGAGATTAACAATTCCATCGGTCGAAGAAGATACATGGTCAAAGACATATGC 1253
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1223 GATTCCAAGGAGGTTAACAATTCCATCGGTCGAGGAAGATACATGGTCAAAGACATATGC 1282
Query 1254 TGTGGCCAGCGTCT-CATTAGCGCCTGTCCTTTTGGCGTCTCTCTGGAGTAGCCAAGACG 1312
|||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1283 TGTGGCCAGCGT-TACATTAGCTCCTGTCCTTTTGGCGTCTCTCTGGAGTAGCCAAGACG 1341
Query 1313 ATGTGAGTCTCCAAGCTTGTGGTGTCGCATACTTT-TTCAGCGTTGTTATAGGCTCCACT 1371
||||||||| ||||||||||||||||||||||||| || | |||| ||||||||| |||
Sbjct 1342 ATGTGAGTCCCCAAGCTTGTGGTGTCGCATACTTTATTG-GTGTTGCTATAGGCTCTACT 1400
Query 1372 CTTGGCTTTCTGGCTTACAAAAACACAGAACCTGATCACCCACCTCGAAGATTCTTGATC 1431
||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1401 CTTGGTTTTCTTGCTTACAAAAACACAGAACCCGATCACCCACCTCGAAGATTCTTGATC 1460
Query 1432 CCTTGGGTTCTTGGTGGGTTTATAATGAGCATCGTATGGTTCTACATGATAGCAAACGAA 1491
|||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1461 CCTTGGGTCCTTGGTGGGTTTATCATGAGCATCGTATGGTTCTACATGATTGCAAACGAA 1520
Query 1492 CTCGTTGCTCTTCTGGTGACATTTGGTGAGATTTACGGAATCAACCCGTCGATACTTGCG 1551
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1521 CTTGTAGCTCTTCTGGTGACATTTGGTGAGATTTACGGAATTAACCCGTCGATACTTGCG 1580
Query 1552 CTAACAGTACTTGCTTGGGGAAACTCAATGGGTGACTTAGTATCGAATATCGCATTGACA 1611
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1581 CTAACAGTACTTGCTTGGGGAAACTCAATGGGTGACTTAGTGTCGAATATCGCATTGACG 1640
Query 1612 ATGAACGGTGGGGATGGTGTACAAATCGCTCTATCGGGATGCTACGCCGGTCCAATGTTC 1671
||||||||||| ||||||||||||||||| ||||| |||||||| || ||||||||||||
Sbjct 1641 ATGAACGGTGGAGATGGTGTACAAATCGCCCTATCTGGATGCTATGCAGGTCCAATGTTC 1700
Query 1672 AACACACTCGTCGGGCTAGGTATGTCGATGCTTTTTGGCGCATGGTCCAAGAGTCCTGAC 1731
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1701 AACACACTCGTCGGGCTCGGTATGTCAATGCTTTTTGGCGCATGGTCCAAGAGTCCTGAC 1760
Query 1732 ACATACATGCTACCAGAAGACAAAAGCCTATTCTACACACTTGGGTTTCTAGTACTCGGT 1791
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 1761 ACATACATGCTACCAGAAGACAAAAGCCTGTTCTACACACTTGGGTTTCTAGTAGTCGGT 1820
Query 1792 TTGGTTTGGGCTATGGTGATACTCCCGCGCAACGACATGCAACCTAGCAGAACCTTAGGT 1851
|||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||
Sbjct 1821 TTGGTTTGGGCTATGGTGATACTCCCGCGCAACGACATGCGACCTAACAGGACCTTAGGT 1880
Query 1852 GTTGGACTCATTGCAATATATCTGATATTCGTCACTTTCAGGCTGAGCTGCGCCATGGGA 1911
| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1881 ATGGGACTCATTGCAATATATCTGATATTCGTCACTTTCAGGCTCAGTTGCGCCATGGGA 1940
Query 1912 TTCATACCATGGGCTGCTTAA 1932
|||||||||||||||||||||
Sbjct 1941 TTCATACCATGGGCTGCTTAA 1961
> Ahg474542 jgi|Araly1|474542|fgenesh2_kg.1__4496__AT1G54115.1
Length=2023
Score = 1631 bits (883), Expect = 0.0
Identities = 1623/1970 (82%), Gaps = 91/1970 (5%)
Strand=Plus/Plus
Query 1 ATGAGCGCGGTTAGTTTTCTTTACAGCTCGA-AAACCCCCAAATTTCGAGGGG-TTTTCA 58
||||| || || | |||||| || ||||||| || ||||||||||| |||| |||| |
Sbjct 1 ATGAGAGCTGTGAATTTTCTATATAGCTCGAGTAA-TCCCAAATTTCG-GGGGATTTTTA 58
Query 59 ATGGGATTTGTGCTCTGGTTCTGTT-TTGCTTCTTCTTTGATCGGAGCGAAT-TACTCAG 116
||||| ||||||| | || || || | |||||||||||||||||| | || |||||||
Sbjct 59 ATGGGCTTTGTGCAATAGTCCTATTCAT-CTTCTTCTTTGATCGGAGTG-ATATACTCAG 116
Query 117 AAACCCTTTGTTAAGGAACGC-GTCTTTCGTCAATGGTGGTAGTGGCTCAACCTCCG-GA 174
||||||||||||||||| | ||||||||| || | ||| || |||| || | |
Sbjct 117 GAACCCTTTGTTAAGGAA-TCTGTCTTTCGT---TGATTCTAGCGG-TCAA-TTCAGTAA 170
Query 175 --GGTATCACCCAGTTTA-TGGTAATTCGTAGAAATGCGAGGCAAATTGAAACGAATGGT 231
||| | | |||||||| | ||||||| | | ||| | | ||| | | ||||
Sbjct 171 TGGGT-TTAGCCAGTTTACT-GTAATTC---G---T-CGA--C-ATTTG--A-G--TGGT 213
Query 232 TCTGGTAATAATAGCAGCTTGAGTAGCAG-TAGTACTGT-TTTATGCTCAGGGTTACACA 289
||| | |||||||||||||||| | | || |||||| | | ||||| ||||||||
Sbjct 214 TCTTCTGGTAATAGCAGCTTGAGT-GGTGATACTACTGTATCT-TGCTCTGGGTTACATG 271
Query 290 AACACATG-GGTTATGCTGATCAATGCGAGTTCTTAAAAGCAAACCCAATTTGTTCCCCT 348
|||||| | ||||||| |||||||||||||||||| | | | || || |||||||| ||
Sbjct 272 AACACA-GAGGTTATGTTGATCAATGCGAGTTCTTGATATCGAATCCGATTTGTTCTCCA 330
Query 349 GATGGATTCTTTGATTACCTC-AGCTTCTTTTACTGCTCCTGTAGAGA-TTTCAGTATCT 406
||||| ||||||||||||||| || ||||||||||||||||| ||||| ||| || ||||
Sbjct 331 GATGGGTTCTTTGATTACCTCAAG-TTCTTTTACTGCTCCTGCAGAGATTTTAAG-ATCT 388
Query 407 TGGGTTACATGA-TGTTAGGTGTTTGGCTTGTTGCTTTGTTTTATCTGTTGGGTAATACT 465
||||||| | | ||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 389 TGGGTTA-TTTAGTGTTAGGGGTTTGGCTTGTTGCTTTGTTTTATCTTTTGGGTAATACT 447
Query 466 GCTGCTGATTACTTTTGTTGTTCACTGGAGAAGCTTTCAAAGCTTTTGAGGCTGCCTCCA 525
||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||
Sbjct 448 GCTGCTGATTACTTTTGTTGTTCGTTGGAGAAGCTTTCTAAGCTTTTGAGGTTGCCTCCA 507
Query 526 ACTGTTGCTGGTGTTACTTTACTTCCTCTTGGGAATGGAGCACCAGATGTGTTTGCTAGT 585
|||||||||||||||||||| ||||| ||||| |||||||| || ||||||||||| |||
Sbjct 508 ACTGTTGCTGGTGTTACTTTGCTTCCACTTGGTAATGGAGCTCCTGATGTGTTTGCGAGT 567
Query 586 ATAGCTGCTTTTGTTGGTACAGATAAAGGAGAAGTTGGTCTTAACAGCGTCTTGGGTGGT 645
|||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||
Sbjct 568 ATAGCTGCTTTTGTTGGTTCAGATAAAGGGGAAGTGGGTCTTAACAGCGTCTTGGGTGGT 627
Query 646 GCTGTGTTTGTTACTTCTGTTGTTGTAGGGATTGTTTCGCTTTGTGTTGCGGATAAGGAA 705
|| |||||||| |||| ||||||||| ||||||||||| ||||||||||||||||| |||
Sbjct 628 GCGGTGTTTGTAACTTGTGTTGTTGTTGGGATTGTTTCTCTTTGTGTTGCGGATAAAGAA 687
Query 706 GTCAAGATCGATAAGAATTGCTTCATCAGAGACTTGAGTTTCTTCCTTTTCTCGCTTG-T 764
|| |||||||||||||| || |||||||||||||||||||||||||||||| | ||| |
Sbjct 688 GTTAAGATCGATAAGAAATGTTTCATCAGAGACTTGAGTTTCTTCCTTTTCACA-TTGGT 746
Query 765 GTCTTTGCTGGTGATTTTGATGGTTGGTAGAG-TGACAGTCCGG-ATTGCCATCGCGTTT 822
| ||||| |||||||||||||||| |||| || |||| || || || ||||| ||||||
Sbjct 747 GGCTTTGATGGTGATTTTGATGGTCGGTA-AGGTGACTGTT-GGTATCGCCATTGCGTTT 804
Query 823 GTCTCAATATATGTGGTTTATGCTT-TCCTTGTGGCAGCGAATGTGATTCTGAGAAAACA 881
||||| || ||||| ||||||||| || | ||||| ||||||| |||| |||| |||||
Sbjct 805 GTCTCGATCTATGTCCTTTATGCTTCTC-TCGTGGCTGCGAATGAGATTTTGAGGAAACA 863
Query 882 TGCTAAGAGGTTTAAACTAGAGGCTCTTACTCCTTTGCTACCTATGCAAGGAAGTGTGTT 941
| | | |||||| || || || ||||||| |||||||| || ||||| |||||||||||
Sbjct 864 TTCCAGGAGGTTGAAGCTGGATTCTCTTACGCCTTTGCTCCCAATGCAGGGAAGTGTGTT 923
Query 942 TTCCCCGAGTGTTGGAGAGGATATGCCAATGAATACCCCCTTGATAGAAACT-GAGACTG 1000
||||| ||||||| ||||||||| || ||| | | ||| ||| ||||| || || || |
Sbjct 924 CTCCCCAAGTGTTGAAGAGGATATTCCTATGTACAGCCCGTTGCTAGAA-CTTGACACCG 982
Query 1001 AGGATGGTCCACCTCGGCTACA-GAGTCT-TCCT-CAGTGGATGTGGGCGT-CAAATGTG 1056
|||| ||||||||||||||||| || ||| ||| |||||||||||||| | |||||||
Sbjct 983 AGGAAGGTCCACCTCGGCTACATGATTCTCTCCCACAGTGGATGTGGGC-TACAAATGTA 1041
Query 1057 GCCATCTATTCAAACCATTTCGCAAAAGTTAGTGTACATGATGAAGACAGGCCACCTTGG 1116
|||||||||||||||||||||||||||| | ||||||||||||||| || || || |||
Sbjct 1042 GCCATCTATTCAAACCATTTCGCAAAAGCCAATGTACATGATGAAGAAAGACCTCCATGG 1101
Query 1117 GGATGGATTGATGACACTGCAGAAGTAGAGAGCTCCTCATGTACTAAATTCACTTCCTTG 1176
||||||| || || ||||||||| |||||||| | |||| ||||| |||| || ||
Sbjct 1102 GGATGGACCGAAGATGGTGCAGAAGTCGAGAGCTCATTATGTTCTAAAATCACATCTTT- 1160
Query 1177 T-TGGAAATTCCGCTGACCATTCCAAGGA-GATTAACAATTCCATCGGTCGAAGAAGATA 1234
| |||||| ||| ||||| |||| || | | || ||||| || | | | || |||||||
Sbjct 1161 TCTGGAAACTCCACTGACTGTTCCTAG-ACGGTTGACAATCCCGTTGATTGAGGAAGATA 1219
Query 1235 -CATGGTCAAAGACATATGCTGTGGCCAGCGTCTCATTAGCGCCTGTCCT--TTTGGCGT 1291
| ||||||||||| ||||| ||||| || ||||| || || |||||||| ||| | |
Sbjct 1220 GC-TGGTCAAAGACGTATGCGGTGGCTAGTGTCTCGTTGGCTCCTGTCCTACTTT--CTT 1276
Query 1292 CTCTCTGGAGTAGCCAAGACGATGTGAGTCTCCAAGCTTGTGGT-GTCGCATACTTTT-T 1349
||| ||||| |||||||| ||| |||||| |||||| | | | || || || |||| |
Sbjct 1277 TTCTTTGGAGCAGCCAAGATGATACGAGTCTTCAAGCTCG-GATTGTAGCCTA-TTTTAT 1334
Query 1350 CAGCGTTGTTATAGGCTCCACTCTTGGCTTTCTGGCTTACAAAAACACAGAACCTGATCA 1409
| | ||| || || || |||||||| | ||| || ||||||||||||||||| ||||
Sbjct 1335 CGGAATTGCGATTGGATCTACTCTTGGATATCTCGCGTACAAAAACACAGAACCCGATCG 1394
Query 1410 CCCACCTCGAAGATTCTTGATCCCTTGGGTTCTTGGTGGGTTTATAATGAGCATCGTATG 1469
||||||| ||||| ||| ||||||||||| || ||||| || || ||||||||||||||
Sbjct 1395 TCCACCTCAAAGATACTTAATCCCTTGGGTACTCGGTGGATTCATCATGAGCATCGTATG 1454
Query 1470 GTTCTACATGATAGCAAACGAACTCGTTGCTCTTCTGGTGACATTTGGTGAGATT-TACG 1528
|||||||||||| ||||||||||||||||| ||| |||| |||||||||| || | ||||
Sbjct 1455 GTTCTACATGATTGCAAACGAACTCGTTGCACTTTTGGTTACATTTGGTG-GAATCTACG 1513
Query 1529 GAATCAACCCGTCGATACTTGCG-CTAACAGTACTTGCTTGGGGAAACTCAATGGGTGAC 1587
||||||||||||||||||| | | ||||| ||||||||||||||||||||||||||||||
Sbjct 1514 GAATCAACCCGTCGATACTCG-GTCTAACCGTACTTGCTTGGGGAAACTCAATGGGTGAC 1572
Query 1588 TTAGTATCGAATATCGCATTGACAATGAACGGTGGGGATGGTGTACAAATCGC-TCTATC 1646
||||| ||||| ||||||||| | ||||||||||| ||||| ||||||||||| | ||||
Sbjct 1573 TTAGTGTCGAACATCGCATTGTCGATGAACGGTGGAGATGGGGTACAAATCGCAT-TATC 1631
Query 1647 GGGATGCTACGCCGGTCCAATGTTCAACACACTCGTCGGGCTAGGTATGTCGATGCTTT- 1705
||| |||||||| ||||||||||| ||||| || || ||| |||||||||||||| |||
Sbjct 1632 GGGTTGCTACGCAGGTCCAATGTTTAACACGCTTGTTGGGTTAGGTATGTCGATG-TTTC 1690
Query 1706 TTGGCGCATGGTCCAAGAGTCCTGACACATACATGCTACCAGAAGACAAAAGCCTATTCT 1765
|||| || ||||| |||||||| || ||||||||| | || || ||||| ||| | ||||
Sbjct 1691 TTGGTGCTTGGTCGAAGAGTCCAGAGACATACATGATCCCTGAGGACAATAGCTTGTTCT 1750
Query 1766 ACACACTTGGGTTTCTAGTACTCGGTTTGGTTTGGGCTATGGTGATACTCCCGCGCAACG 1825
|||| || ||||||||| || |||| ||| ||||| || | ||||| ||||| |||||||
Sbjct 1751 ACACTCTAGGGTTTCTAATATTCGGATTGATTTGGTCTCTTGTGATGCTCCCACGCAACG 1810
Query 1826 ACATGCAACCTAGCAGAACCTTA-GGTG--TTGGACTCATTGCAATATATCTGATATTCG 1882
| |||| ||| | || || | | || | |||| || |||||| | |||||||||||||
Sbjct 1811 AAATGCGACCGAACA-AAG-TGATGG-GAATTGGTCTGATTGCACTGTATCTGATATTCG 1867
Query 1883 TCACTTTCAGGCTGAGCTGCGCCATGGGATTCATACCATGGGCTGCTTAA 1932
||||||||||||| |||| |||||||||||||||||| |||||| |||||
Sbjct 1868 TCACTTTCAGGCTCAGCTCCGCCATGGGATTCATACCTTGGGCTTCTTAA 1917
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72600006970
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5