BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G14090.1
Length=2238
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478822 jgi|Araly1|478822|fgenesh2_kg.3__1523__AT3G14090.1 2217 0.0
Ahg474539 jgi|Araly1|474539|fgenesh2_kg.1__4493__AT1G54090.1 1053 0.0
> Ahg478822 jgi|Araly1|478822|fgenesh2_kg.3__1523__AT3G14090.1
Length=2161
Score = 2217 bits (1200), Expect = 0.0
Identities = 1341/1409 (95%), Gaps = 10/1409 (1%)
Strand=Plus/Plus
Query 832 ATCAGGAAATGGATTCGTGCTGCTAAAGTTTGCATTAGAGTTGTTTTCTCTAGTGAGAAG 891
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 761 ATCAGGAAATGGATTCGTGCAGCTAAAGTTTGCATTAGAGTTGTTTTCTCTAGTGAGAAG 820
Query 892 AGACTATGTGAGCAGCTCTTTGATGGTATTTGCACTGCCATGGATGAGACTTGTTTCATG 951
||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct 821 AGACTATGTGAGCAGCTATTTGATGGTATTTGCACGGCTATGGATGAGACTTGTTTCATG 880
Query 952 GAGACAGTGAAGGCTTCTGCTCTGAGACTTTTCACTTTCCCTGAAGCTATAAGTATCAGT 1011
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 881 GAGACAGTGAAGGCCTCTGCTCTGCGACTTTTCACTTTCCCTGAAGCTATAAGTATCAGT 940
Query 1012 AGAAGATCACCTGAGAAGCTGTTCAAGATTCTTGATTTACATGATGCTTTAACGGATATG 1071
|||||||||||||||||||| |||||||||||||||||||| |||||||| || ||||||
Sbjct 941 AGAAGATCACCTGAGAAGCTTTTCAAGATTCTTGATTTACACGATGCTTTGACCGATATG 1000
Query 1072 TTGCCGGATATTGAAGCAATCTTTGACTCAGATTCATCAGATGCTATTAGAGCTCAGGCT 1131
|| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct 1001 TTACCGGATATTGAAGCAATCTTTGACTCGGATTCTTCAGATGCTATTAGGGCTCAGGCC 1060
Query 1132 GTTGAGATTCAATCGAGGTTAGCGGAAGCAGCGAGAGGTATACTTTCGGAGTTTGAGAAT 1191
||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 1061 GTTGAGATTCAATCGAGACTAGCGGAAGCAGCGAGAGGTATACTTTCGGAATTTGAGAAT 1120
Query 1192 GCGGTTCTTCGCGAACCTTCGATAGTTCCTGTCCCTGGAGGAACGATTCATCCATTGACA 1251
|| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 GCTGTTCTTCATGAACCTTCGATAGTTCCTGTCCCTGGAGGAACGATTCATCCATTGACA 1180
Query 1252 AGGTATGTGATGAACTACATTGTTATGATCTCTGATTATAAGCAAACGTTGGATGATCTC 1311
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1181 AGGTATGTGATGAACTACATTGTTATGATCTCTGATTATAAGCAAACACTGGATGATCTC 1240
Query 1312 ATCATGTCGAATCCCTCTACTGGTTCTGATCCAAACACACCGGATATGGATTTCACGGAG 1371
|||||||||||||| || | ||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1241 ATCATGTCGAATCCTTCAAGTGGGTCTGATCCAAACACACCAGATATGGATTTCACGGAG 1300
Query 1372 TTGGATAGTAAATCTCCGTTGGATTTGCATTTGATATGGTTGATTGTGGTCTTGCATTTC 1431
| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1301 CTAGAGAGTAAATCTCCATTGGATTTGCATTTGATATGGTTGATTGTGGTCTTGCATTTC 1360
Query 1432 AACTTAGAAGAGAAATCCAAGCACTATAGAGACACATCTCTAGCTCACATATTCATCATG 1491
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 1361 AACTTAGAAGAGAAATCCAAGCACTATAGAGACACATCTCTATCTCACATATTCATAATG 1420
Query 1492 AACAACATCCATTACATTGTTCAGAAAGTGAAAAGGTCACCAGAACTACGAGAGATGATT 1551
||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||||||
Sbjct 1421 AACAACATCCATTACATTGTTCAGAAAGTGAAAAGGTCACCGGAGCTAAGAGAAATGATT 1480
Query 1552 GGAGACCATTATTTAAGGAAACTCACTGGGATATTTAGACATGCTGCCACAAACTACCAG 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GGAGACCATTATTTAAGGAAACTCACTGGGATATTTAGACATGCTGCCACAAACTACCAG 1540
Query 1612 AGAGCTACATGGGTCAGAGTACTGAATAGTTTGAGAGATGAAGGATTACATGTGAGTGGG 1671
||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 1541 AGAGCGACATGGGTCAGAGTACTGAATAGCCTGAGAGATGAAGGATTACATGTGACTGGG 1600
Query 1672 AGTTTCTCCTCAGGTGTATCAAGAAGTGCATTAAGAGAGAGGTTTAAGGCATTCAATACA 1731
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 1601 AGTTTCTCCTCAGGTGTATCAAGAAGTGCACTAAGAGAAAGGTTTAAGGCATTCAATACA 1660
Query 1732 ATGTTCGAAGAGGTTCACAGGACTCAGTCCACATGGTCGGTTCCAGATGCTCAGCTTAGA 1791
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1661 ATGTTCGAAGAGGTTCACAGGATTCAGTCCACATGGTCGGTTCCAGATGCTCAGCTTAGA 1720
Query 1792 GAAGAACTCCGAATATCGCTATCCGAGCATCTAATCCCTGCTTATAGATCGTTTCTTGGA 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1721 GAAGAACTCCGAATATCGCTATCCGAGCATCTAATCCCTGCTTATAGATCGTTTCTTGGA 1780
Query 1852 AGGTTCAGGGGTCATATAGAGAGTGGAAGACACCCTGAGAACTATTTGAAATATTCGGTT 1911
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1781 AGGTTCAGGGGTCATATAGAGAGCGGAAGACACCCTGAGAACTATTTGAAATATTCTGTT 1840
Query 1912 GAAGATATCGAGACCATCGTTCTAGATTTCTTCGAAGGATATACCACACCACCACACTTG 1971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1841 GAAGATATCGAGACCATCGTTCTAGATTTCTTCGAAGGATATACCACACCACCACACTTG 1900
Query 1972 AGGAGGCGATAAAAGAAGATCGAAAACCCGAGAGTTCTATCTTCTTTCTTTCGTTTTTCA 2031
|||||||||||||||||||| ||||| | |||||||| ||||||||||||| |||||||
Sbjct 1901 AGGAGGCGATAAAAGAAGATGGAAAAACGGAGAGTTCG-TCTTCTTTCTTTCTTTTTTCA 1959
Query 2032 GTCACATTAGGATGTCATAGAAATAGAACCATTCTTTGAATTTTTATTCACGGGTTTCCT 2091
| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 1960 GCCACATTAGGATGTCATAGAAATAGAGCCATTCTTTGAATTTTTATTCACGGGTT-CCT 2018
Query 2092 GCCCGGTGGAATAATCTCCAGGTGAACATAT-TT-GTGTGTTGTTGTTTGTGCCATATGT 2149
||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||
Sbjct 2019 GCCCGGTGGAATAATCTCCAGGTAAACATATATTTGTGTGTTGTTGTTTGTGCCATATGT 2078
Query 2150 CTTCTATTTATAAAAGTCCTGATTGATCACAGAACCAATAAGTACCATGTAAATTTTGCA 2209
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2079 CTTCT-TTTA-----GTCCTGATTGATCACAGAACCAATAAGTACCATGTAAATTTTGCA 2132
Query 2210 ATGTGCGACGTCCTCTACTCATTTGCTCC 2238
|||||| ||||| ||||||| ||||||||
Sbjct 2133 ATGTGCCACGTCTTCTACTCTTTTGCTCC 2161
Score = 1131 bits (612), Expect = 0.0
Identities = 726/777 (93%), Gaps = 23/777 (3%)
Strand=Plus/Plus
Query 25 aaaaaaaaaaCCGAAGTGGTTTCTTACCAAAAAATCAACCAATCTCCTTCACGAATTTCC 84
|||| ||||| ||||||||||||||||| |||||| | |||||||||||| |||| |
Sbjct 1 AAAATAAAAATCGAAGTGGTTTCTTACC-AAAAAT----CGATCTCCTTCACGGATTTTC 55
Query 85 ATCTGAGAAGAATTTGAATCGGTGGAGATGGAACCGCCGGAGAATAGTTTAGATTCCGAT 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 56 ATCTGAGAAGAATTTGAATCGGTGGAGATGGAACCGCCGGAGAATAGTTTAGATTCCGAT 115
Query 145 GGTTCGAACTTAGAGACAGCGGAGAGGATAATACTCCGGTGGGACTCAGCAGCGACTGAT 204
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 116 GGTTCGAAGTTAGAGACGGCGGAGAGGATAATACTCCGGTGGGACTCAGCGGCGACTGAT 175
Query 205 GGAGCAAGAGGGAAGATGATTTTCCAAAGCGATCGTGATGAGGTGGATCGGTTTCTTCGA 264
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 176 GGAGCTAGAGGGAAGATGATTTTCCAAAGCGATCGTGATGAGGTGGATCGGTTTCTCCGA 235
Query 265 GCCGTTGATGAAATCCAACGGTCCTTAtcttctgtctctttctcttcttcttcCTCCTCC 324
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 236 GCCGTTGATGAAATCCAACGGTCCTTATCTTCTGTCTCCTTCTCTTCTTCTTCCTCCTCC 295
Query 325 GCCGCCACCTCCGCCGCCACCGTAGTCGATGAACACGAGGTCAAAGCCAACTCAGCTATT 384
||||||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct 296 GCCGCCA---------CCA-C--AGTCGATGAACACGAGGTCAAAGCCAACTCAGCTATC 343
Query 385 CAAATCGCTATGGCTAGACTCGAAGACGAGTTCCGTAACATTCTTCTCTCCCACACAACT 444
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 344 CAAATCGCCATGGCTAGACTCGAAGATGAGTTCCGTAACATTCTTCTCTCCCACACAACT 403
Query 445 ACTTTCGAGCCTGATTCACTTTTCCTCGAGGAA-C--CATCAGTCTCTCCGTCTTTAACC 501
||||||||||||||||||||||| || |||||| | |||||||||||||||||||| |
Sbjct 404 ACTTTCGAGCCTGATTCACTTTTTCTTGAGGAATCATCATCAGTCTCTCCGTCTTTATGC 463
Query 502 GTCGAAGTTGGAGAAGAT---ACCACCGTAACTCCCGAAGAAGAAGAATTAAATTCTCCA 558
||||| |||||||||||| |||||||||||| |||||||||||||||||||||| |||
Sbjct 464 GTCGAGGTTGGAGAAGATACCACCACCGTAACTACCGAAGAAGAAGAATTAAATTCGCCA 523
Query 559 GGTGGTTCCGGTTCAAGCCGGTTAACTCGTAGAAGAAGCAGTTACAGATCCACTAGCAGT 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 524 GGTGGTTCCGGTTCAAGCCGGTTAACTCGTAGAAGAAGCAGTTACAGATCCACTAGCAGT 583
Query 619 ATACGAGAAATGGATCTGATTTCGCCGGAAGCAGTTTCTGATCTAAGATCGATTGTTCAA 678
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 584 ATACGAGAAATGGATCTGATCTCGCCGGAAGCAGTTTCTGATCTGAGATCGATTGTTCAA 643
Query 679 CGAATGGTCGCCGCCGGTTACTCTCGTGAATGTATCCAAGTCTATGGAACTGTTCGCAAA 738
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct 644 CGAATGGTCGCCGCCGGTTACTCTCGTGAGTGTATCCAAGTATACGGAACTGTTCGCAAA 703
Query 739 TCAGCCATGGAAGCAATATTTAAGCAGCTTGGGATTGTGAAGATAAGCATTGGTGAT 795
|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 704 TCAGCCATGGAAACAATATTTAAGCAGCTTGGGATTGTGAAGATAAGCATTGGAGAT 760
> Ahg474539 jgi|Araly1|474539|fgenesh2_kg.1__4493__AT1G54090.1
Length=2259
Score = 1053 bits (570), Expect = 0.0
Identities = 1171/1452 (81%), Gaps = 78/1452 (5%)
Strand=Plus/Plus
Query 564 TTCCGGTTCAAGCCGGTTAACTCGTAGAAGAAGCAGT--TA-CAGATCCACTAGCAGTAT 620
||||||||| || |||||| | | || ||||| ||| || || |||||| ||||||||
Sbjct 574 TTCCGGTTCGAGACGGTTATCGAGGAGTAGAAGGAGTAATAGCAAATCCACAAGCAGTAT 633
Query 621 ACGAGAAATGGATC-TGATTTCGCCGGAAGCAGTTTCTGATCTAAGATCGATTGTTCA-A 678
|||||| || |||| || | ||||||||||| ||||||||||| |||||||||| ||| |
Sbjct 634 ACGAGAGATCGATCTTG-TATCGCCGGAAGCTGTTTCTGATCTGAGATCGATTGCTCAGA 692
Query 679 CGAATGGTCGCCGCCGGTTACTCTCGTGAATGTATCCAAGTCTATGG-AACTGTTCGCAA 737
||||| ||| || |||||||||||||||||| | || || || || ||| || | ||
Sbjct 693 -GAATGATCGGAGCTGGTTACTCTCGTGAATGTGTTCAGGTATACGGAAAC-GTGAGAAA 750
Query 738 ATCAGCCATGGAAGCAATATTTAAGCAGCTTGGGATTGTGAAGA-TAAGCATTGGTGATG 796
||| ||||||||| || ||||||||||| ||||||||||| | || | ||||| ||||
Sbjct 751 ATCCGCCATGGAAATGATTTTTAAGCAGCTAGGGATTGTGAA-ATTAGGGATTGGAGATG 809
Query 797 TTCAAAGGCTTGAGTGGGAAGTTGTTGAAG-GAAAGATCAGGAA-ATGGATTCGTGCTGC 854
| || |||||||| ||||||| ||| |||| | ||||||| ||| |||||| ||||| ||
Sbjct 810 TGCAGAGGCTTGATTGGGAAGCTGTGGAAGTG-AAGATCA-GAAGATGGATCCGTGCGGC 867
Query 855 TAAAGTTTGCATTAGAGTTGTTTTCTCTAGTGAGAAGAGACTATGTGAGCAGCTCTTTGA 914
|| |||||| |||||||||||||| |||| ||||||||||| ||||| || | |||||
Sbjct 868 GAAGGTTTGCGTTAGAGTTGTTTTCGCTAGCGAGAAGAGACTCTGTGAACAAATATTTGA 927
Query 915 TGGTATTTGCACTGCCATGGATGAGACTTGTTTCATGGAGACAG-TGAAGGCTTCTGCTC 973
| | | |||||||| ||||| ||||||||||||| | | || || ||||||
Sbjct 928 ----A---GGA--GCCATGGAAGAGACATGTTTCATGGAGATTGTTAAAAGC-TCTGCTT 977
Query 974 TG-AGACTTTTCACTTTCCCTGAAGCTATAAGTATCAGTAGAAGATCACCTGAGAAGCTG 1032
|| || ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 978 TGCAG-CTTTTCAATTTCCCTGAAGCTATAAGTATTAGTAGAAGATCACCTGAGAAACTA 1036
Query 1033 TTCAAGATTCTTGATTTACATGATGCTTTAACGGATATGTTGCCGGATATTGAAGCA-AT 1091
|||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||| | ||
Sbjct 1037 TTCAAGATTCTTGATTTACATGATGCTTTAACTGATTTGTTGCCTGATATGGAAG-AGAT 1095
Query 1092 CTTT-GACTC-AGATTCATCAGA-TGCTATTAGAGCTCAGGCTGTTGAGATTCAATCGAG 1148
||| || || || |||||| || | | ||| | ||| ||| ||||||||||| ||
Sbjct 1096 -TTTCGATTCGAG-TTCATCGGAAT-CGATTCTTGTTCAAGCTACAGAGATTCAATCAAG 1152
Query 1149 GTTAGCGGAAGCAGCGAGAGGTATACTTTCGGAGTTTGAGAATGCGGTTCTTCGCGAACC 1208
||||| |||||||| ||||| ||||| | |||||||||||||||||| |||| |||||
Sbjct 1153 ATTAGCTGAAGCAGCAAGAGGGATACTCACTGAGTTTGAGAATGCGGTTTTTCGTGAACC 1212
Query 1209 TTCGATAGTTCCTGTCCCTGGAGGAACGATTCATCCATTGACAAGGTATGTGATGAACTA 1268
||| | |||||||||||||||||||| || ||||| |||||||||||||||||||| ||
Sbjct 1213 ATCGGTTGTTCCTGTCCCTGGAGGAACTATACATCCTTTGACAAGGTATGTGATGAATTA 1272
Query 1269 CATTGT-TATGATCTCTGATTATAAGCAAACGTTGGAT-GATCTCATCATGTCGAATCCC 1326
| | | |||||||||| |||||| |||||||| || |||||||| ||| |||| ||
Sbjct 1273 CCTCAACT-TGATCTCTGACTATAAGGAAACGTTG-ATTGATCTCATTATGACGAAACCA 1330
Query 1327 TCTACTGG-TT--C--TG-ATCCAA--A-C-A--CA--CCGGATATGGATTTCACGGAG- 1371
| | | || || | || | |||| | | | || || ||||||||| || | ||
Sbjct 1331 TGT-CGGGGTTTGCAATGTA-CCAATGATCCAAACAATCCCGATATGGATATCTCTCAGC 1388
Query 1372 TTGGATAGTAA-ATCTCCGTTGGATTTGCATTTGATATGGTTGATTGTGGT-CTTGCATT 1429
||| | || || ||||||||| | ||||||| |||||||| || ||| | || || |
Sbjct 1389 TTG-A-AGGAATATCTCCGTTAGCTTTGCATATGATATGGACAATGGTGATGCTA-CAAT 1445
Query 1430 TCAA-CTTAGAAGAGAAATCCAAGCACTATAGAGAC-ACATCTCTAGCTCACATATTCAT 1487
|||| || ||||||||| || ||| || | ||| | | || || ||||||| ||| |
Sbjct 1446 TCAATCT-AGAAGAGAAGTCTTTGCATTACAAAGATGA-ACCTTTATCTCACATCTTCGT 1503
Query 1488 CATGAACAACATCCATTACATTGTTCAGAAAGTGAAAAGGTCACCAGAACTAC-GAGAGA 1546
|||||||| |||||||||| |||||||| || ||||| || || || ||| | |||
Sbjct 1504 TATGAACAATGTCCATTACATAGTTCAGAAGGTCAAAAGCTCGCCGGAGCTAATG-GAGT 1562
Query 1547 TGATTGGAGACCATTATTTAAGGAAA-CTCACTGGGATATTTAGACATGCTGCCACAAAC 1605
||||||||||| | |||||||| ||| || || |||||||||||||| || ||||| ||
Sbjct 1563 TGATTGGAGACAAGTATTTAAG-AAAGCTTACCGGGATATTTAGACAGGCAGCCACCAAG 1621
Query 1606 TACCAGAGAGCTACATGGGTCAGAGTACTGAATAGTTTGAGAGATGAAGGATTACATGTG 1665
|| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct 1622 TATCAGAGAGCTACATGGGTTAGAGTGTTGAATAGCTTGAGAGATGAAGGATTACATGTG 1681
Query 1666 AGTGGGAGTTTCTCCTCAGGTGTATCAA-GAAGTGCATTAAGAGAGAGGTTTAAGGCATT 1724
|| || || ||||| || |||||||||| || |||| ||||||||||||||||| || ||
Sbjct 1682 AGCGGAAGCTTCTCTTCCGGTGTATCAAAGA-GTGCTTTAAGAGAGAGGTTTAAAGCTTT 1740
Query 1725 CAATACAATGTTCGAAGAGGTTCACAGGACTCAGTCCACATGGTCGGTTCCAGATGCTCA 1784
|||||||||||| |||||||||||||||| ||| || |||||||||||||||||| ||||
Sbjct 1741 CAATACAATGTTTGAAGAGGTTCACAGGATTCAATCGACATGGTCGGTTCCAGATACTCA 1800
Query 1785 GCTTAGAGAAGAACTCCGAATATCGCTATCCGAGCATCTAATCCCTGCTTATAGATCGTT 1844
||||||||||||||| | ||||| ||||| || ||||| ||||| ||||||||||| ||
Sbjct 1801 GCTTAGAGAAGAACTGAGGATATCTCTATCGGAACATCTTATCCCGGCTTATAGATCCTT 1860
Query 1845 TCTTGGAAGGTTCAGGGGTCATATAGAGAGTGGAAGACACCCTGAGAACTATTTGAAATA 1904
||||||||| |||||||| ||||||||||| |||||||| || || ||||| ||||||||
Sbjct 1861 TCTTGGAAGATTCAGGGGACATATAGAGAGCGGAAGACATCCAGAAAACTACTTGAAATA 1920
Query 1905 TTCGGTTGA-AGATATCGAGACCA-TCGT-TCTAGATTTCTTCGAAGGATATACCACACC 1961
|| ||||| | || | || ||| | || | | |||||||||||||||||||||||| |
Sbjct 1921 CTCTGTTGACA-ATCTTGAAACCGCT-GTGT-TGGATTTCTTCGAAGGATATACCACAGC 1977
Query 1962 ACCACACTTGAG 1973
||||| |||||
Sbjct 1978 TCCACATTTGAG 1989
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84255621940
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5