BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G14590.2
Length=2635
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478877 jgi|Araly1|478877|fgenesh2_kg.3__1578__AT3G14590.1 3410 0.0
Ahg314675 jgi|Araly1|314675|fgenesh1_pm.C_scaffold_1003455 1070 0.0
> Ahg478877 jgi|Araly1|478877|fgenesh2_kg.3__1578__AT3G14590.1
Length=2615
Score = 3410 bits (1846), Expect = 0.0
Identities = 2102/2222 (95%), Gaps = 32/2222 (1%)
Strand=Plus/Plus
Query 368 GGTTCATGAACGCTATGTGATGAGATTGAGGAAGAAATTGCAGTTTGAAGAGAGGAAGCA 427
|||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||
Sbjct 399 GGTTCATGAACGCTATGTGATGAGGTTGAGGAAGAAACTACAGTTTGAAGAGAGGAAGCA 458
Query 428 AGCTAACCAGAGACGTGTTCTATCTGATTCTGAATCGGTGCGGTGGTTGAATCATGCCGT 487
||||||||||||| | |||||||||||||||||||||||| ||||||| |||||||| |
Sbjct 459 AGCTAACCAGAGAAGGGTTCTATCTGATTCTGAATCGGTGAGGTGGTTAAATCATGCTAT 518
Query 488 GGAGAGGATATGGCCTATTTGTATGGAACAGATTGCTTCTCAGAAGATTCTTCGTCCGAT 547
||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 519 GGAGAAGATATGGCCTATTTGTATGGAACAGATTGCATCTCAGAAGATTCTACGTCCGAT 578
Query 548 CATACCTTGGTTCTTGGACAAGTATAGACCTTGGACTGCGAAAAAAGTTGTGATACAACA 607
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 579 CATACCTTGGTTCTTGGACAAGTATAGACCTTGGACTGCGAAAAAAGCTGTGATACAACA 638
Query 608 CCTTTATTTGGGAAGAAACCCTCCTTTGTTGACAGATATTAGGGTTCTACGGCAATCTAC 667
||| ||||||||||||||||| ||||||||||||||||| ||||| || |||||||||||
Sbjct 639 CCTCTATTTGGGAAGAAACCCGCCTTTGTTGACAGATATAAGGGTGCTTCGGCAATCTAC 698
Query 668 GGGTGATGATCACTTGGTACTGGAACTTGGAATGAATTTCCTCACAGCAGATGATATGAG 727
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 699 GGGTGATGATCACTTGGTGCTGGAACTTGGAATGAATTTCCTCACAGCAGATGATATGAG 758
Query 728 CGCAATACTCGCTGTGAAGTTAAGAAAAAGACTTGGGTTTGGAATGTGGACAAAGTTGCA 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 759 CGCAATACTCGCTGTGAAGTTAAGAAAAAGACTTGGGTTTGGAATGTGGACAAAGTTGCA 818
Query 788 TTTGACAGGAATGCATGTTGAAGGAAAGGTGTTGATTGGAGTGAAGTTCCTTCGTCGATG 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 TTTGACAGGAATGCATGTTGAAGGAAAGGTGTTGATTGGAGTGAAGTTCCTTCGTCGATG 878
Query 848 GCCTTTTCTCGGGCGTTTACGAGTGTGTTTTGCAGAGCCACCTTATTTCCAAATGACTGT 907
||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 879 GCCTTTTCTGGGGCGTTTACGTGTTTGTTTTGCAGAGCCACCTTATTTCCAAATGACTGT 938
Query 908 TAAACCAATTACCACTCATGGACTTGATGTTGCTGTGCTTCCAGGGATTGCAGGATGGCT 967
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 939 TAAACCAATTACCACTCATGGACTTGATGTTGCTGCGCTTCCAGGAATTGCAGGATGGCT 998
Query 968 AGACAAACTTTTGTCTGTTGCATTTGAGCAGACTCTTGTTGAGCCAAATATGCTGGTAGT 1027
||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 999 AGATAAACTTTTGTCTGTCGCATTTGAGCAAACTCTTGTTGAGCCAAATATGCTGGTAGT 1058
Query 1028 TGATATGGAGAAATTTGTTAGCCCAGAGTCAGGAGATAATTGGTTCTTTGTTGATGAGAA 1087
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 1059 TGATATGGAGAAATTTGTTAGCCCAGAGCCAGGAGAAAATTGGTTCTTTGTTGATGAGAA 1118
Query 1088 AGAACCAGTAGCACACGCTCTTGTTGAAGTCGTTGAAGCATGTGATGTTAAACCATCAGA 1147
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1119 AGAACCAGTAGCACACGCTCTTGTTGAAGTCGTTGAAGCATCTGATGTTAAACCATCAGA 1178
Query 1148 TCTAAACGGTTTAGCTGATCCTTACGTGAAAGGGCAGCTTGGCGCTTACAGATTCAAAAC 1207
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1179 TCTAAACGGTTTAGCTGATCCATATGTGAAAGGGCAGCTTGGCGCTTACAGATTCAAAAC 1238
Query 1208 CAAGATACTATGGAAAACCTTGGCTCCCAAATGGCAAGAAGAGTTCAAGATACCAATCTG 1267
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1239 CAAGATACTATGGAAAACGTTGGCTCCTAAATGGCAAGAAGAGTTCAAGATACCAATTTG 1298
Query 1268 CACATGGGACTCCGCAAATATTCTTAACATTGAAGTTCAAGACAAAGACCGATTTAGCGA 1327
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1299 CACATGGGACTCCCCAAATATCCTTAACATTGAAGTTCAAGACAAAGACCGATTTACCGA 1358
Query 1328 TGACAGTCTTGGCGACTGTTCAGTGAACATTGCAGAGTTTCGAGGCGGCCAAAGAAATGA 1387
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1359 TGACAGTCTTGGCGATTGTTCAGTGAACATTGCAGAGTTTCGAGGCGGCCAAAGAAATGA 1418
Query 1388 TATGTGGTTGCCTCTTCAGAACATTAAAATGGGGAGATTGCACCTTGCTATAACCGTACT 1447
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1419 TATGTGGTTGCCTCTTCAGAACATTAAAATGGGGAGGCTGCACCTTGCTATAACCATACT 1478
Query 1448 TGAGGACGAGGCAAAGTTGAACGATGATCCGTTTGAAGGAGTGACAATATGTAAGGAAGA 1507
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1479 TGAGGACGAGGCAAAGTTGAACGATGATCCGTTTGAAGGAGTGACAATAAGTAAGGAAGA 1538
Query 1508 CATGTGGGCTTCTTTTGCTTCCGACGTTACAAATAAAGGTTCCTTCTCATCAGTGGTATC 1567
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1539 CATGTGGGCTTCTTTTGCTTCCGACGTTACAAGTAAAGGTTCCTTCTCATCAGTGGTATC 1598
Query 1568 TGACAAGTCTCCAAGGGTTCCTGATAATATGGAACCAATAAACATCGAAGGACAAGAAGA 1627
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1599 TGACAAGTCTCCAAGGGTTCCTGATAATATGGAACCAATTAACATCGAAGGACAAGAAGA 1658
Query 1628 GACTGGGATTTGGGTACATCAACCAGGAACTGAAGTCTCACAGATTTGGGAACCAAGAAA 1687
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1659 GACTGGAATCTGGGTACATCAACCAGGAACTGAAGTCTCACAGATTTGGGAACCAAGAAA 1718
Query 1688 AGGCAAGAGTCGATGCCTTGATAACAAAATACAGTGC-GCTGGCAGTGTCCGTTCCACTG 1746
||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||
Sbjct 1719 AGGCAAGAGTCGATGCCTTGATAACGAAATAC-GTGGTGCTGGCAGTGTCCGTTCCACTG 1777
Query 1747 CATCTACGTCGCCCAACAATGAAAGCAGCAGCACTGATAAAAATCAGGAAGGGAAGAGCG 1806
||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 1778 CATCTACGTCGCCCAACAAAGAAAGCAGCAGCACTGATGAAAATCAGGAAGGGAAGAGC- 1836
Query 1807 A-GATGAAGTCTGTTGGTTGGGGGCTGAAGAAAATCGGTTTAGTGTTCCATAAGAATGGA 1865
| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 1837 ACGATGAAGTCTGTTGGTCGGGGATTGAAGAAAATCGGTTTAGTGTTCCATAAGAATGGA 1896
Query 1866 AAAAAGGAAGAATGTCATCATACAGGGAGCATTGAAGAGGATATCAGGTCTCCTCGGATT 1925
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1897 AAAAAGGAAGAATGTCATCATAAAGGGAACATTGAAGAGGATATCAGGTCTCCTCGGATT 1956
Query 1926 AATTTGAAGGCGTTAAATCAAAAGGATGTTGGAGTTAAGTTCATCGTTGAAGACAGGCTA 1985
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1957 AATTTGAAGGCGTTAAATCAAAAGGATGTTGGGGTTAAGTTCATCGTTGAAGACAGGCTA 2016
Query 1986 TCGGGGCCTCTCACAGGAAGAAGTCCAAAAGGTGAGAGCTTTGATTCTGAAGACAGTCAG 2045
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2017 TCGGGGCCTCTCACAGGAAGAAGTCCAAAAGGTGAGAGCTTTGGTTCTGAAGACAGTCAG 2076
Query 2046 CACAAGAGACACATGAAGGATGTTGCAAAAAGCATTCTAAAACATGCTGAAAAGTCTGCA 2105
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2077 CACAAGGGACACATGAAGGATGTTGCAAAGAGCATTCTAAAACATGCTGAAAAGTCTGCA 2136
Query 2106 AGACACCTTAAGCATGCTTTTTCGCATAAAGGATCAAGGAAATCAAGAGATGACGAGTGT 2165
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2137 AGACACCTTAAGCATGCTTTTTCGCGTAAAGGATCAAGGAAATCAAGAGATGACGAGTGT 2196
Query 2166 TCAACTGTGTCAGAGCAAGACTCTGAATGTCTAA-GTGAAACTTCTGATGACAAATCTGC 2224
||||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||
Sbjct 2197 TCAACTGTGTCAGAGCAAGACTCTGAATGTC-AACGTGAAAATTCTGATGATGAATCTGT 2255
Query 2225 ATTTAGCAATGTGCAGGACCTGGGGACACTAAGAAGAGCAAAACTTGAAGGAAAGACTGT 2284
|||||||| ||||||||||||||| |||| ||||| |||||||||||||||||| |||||
Sbjct 2256 ATTTAGCAGTGTGCAGGACCTGGGAACACCAAGAACAGCAAAACTTGAAGGAAAAACTGT 2315
Query 2285 CAAGGCAGGTGAAGATGATAATGTAAATACATCCGCGAACTCCAAAGACGATTCGAAA-- 2342
|| || ||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 2316 CAGGGGAGGTGAAGATGATAATGTAAATACATCAGCAAACTCCAAAGACGATTCGAAAGC 2375
Query 2343 A-ACAAG--GAAA--CAAAGAAA-AA---T---TT-AGCAAACTTGGAAACTACATATAG 2389
| ||| |||| |||||||| || | || ||||||||||||||||||||||||
Sbjct 2376 AGACATTTCGAAAAACAAAGAAACAAAGATAAATTTAGCAAACTTGGAAACTACATATAG 2435
Query 2390 TGATGCCAGGAACTCTTTTGCTGGAGCCGAGAAAGTCACCACCCCCAAGAATCGAA--A- 2446
|||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |
Sbjct 2436 TGATGCCAGGAACTCTTTTGCTGGAGCCAAGAAAGTCACCACCCCCAAGAGTCGAAGGAT 2495
Query 2447 --A---GGAATCATAGGTAAATAATCAGAAGCTTGAGGATGAAAAATTTGATTTTG-TTA 2500
| |||||||||||||||||| || |||||||||||||||| ||||||| | |||
Sbjct 2496 TGAAAAGGAATCATAGGTAAATAACCACAAGCTTGAGGATGAAAT-TTTGATTA-GCTTA 2553
Query 2501 GTTGTAGATGTACTCCAAAGGACTCTTGTACAGCTTTTTAGTTTTGAGTCTTCGTCTTAC 2560
| ||||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||| |
Sbjct 2554 GCTGTAGATGTACGCCAAAGGATTCTTGTACAGCTTTTTAGTTTCGAGTCTTTGTCTTGC 2613
Query 2561 TT 2562
||
Sbjct 2614 TT 2615
Score = 344 bits (186), Expect = 2e-93
Identities = 259/292 (89%), Gaps = 13/292 (4%)
Strand=Plus/Plus
Query 81 TTGTTTCTTT-GTCCTTTCCTAACCAACACACATGAAGTGCGACTCGTTTCGGATGGTTT 139
|||||||||| || |||| ||||| |||||||||||| | |||||| ||||||||||||
Sbjct 22 TTGTTTCTTTGGT-CTTTTCTAACTAACACACATGAA--G-GACTCGATTCGGATGGTTT 77
Query 140 TGTTTCATGAGATTGTTGTTTGATCCTTTGGATTTAAGaaaaaaaaGCAAGAATCTTTGG 199
|||||||||||||| |||||||||| | ||||||||| ||||||| |||| ||||||
Sbjct 78 GGTTTCATGAGATTGGTGTTTGATCCCTCGGATTTAAG---AAAAAGCGAGAAACTTTGG 134
Query 200 ACTAGTT-TGTTGTTCACTTCTGGGTTTTGTAACCAAAGGAAGTATAATAATAATGGAGT 258
||||||| |||||||| ||||||||||||||| | |||| | ||| |||||||||||
Sbjct 135 ACTAGTTAAGTTGTTCATTTCTGGGTTTTGTAA-CGGAGGACG--TAA-AATAATGGAGT 190
Query 259 GTTCGGTAATCCATCATGTGGTGATTGTGTTACTGTTACTTTGGGTTCTATCTTACTTGA 318
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 191 GTTCGGTAATCCATCATGTGGTGATTGTGTTACTGTTCCTTTGGGTTCTATCTTACTTGA 250
Query 319 ATCGATCACACGCGGTTTTCTATGTCCTCTCTCTCGTTTATCTTTACCTGGT 370
||||||||||||| |||||||| ||||||| || |||||||||||||||||
Sbjct 251 ATCGATCACACGCTCTTTTCTATTTCCTCTCGCTGGTTTATCTTTACCTGGT 302
> Ahg314675 jgi|Araly1|314675|fgenesh1_pm.C_scaffold_1003455
Length=2196
Score = 1070 bits (579), Expect = 0.0
Identities = 1024/1230 (83%), Gaps = 65/1230 (5%)
Strand=Plus/Plus
Query 252 ATGGAGTGTTCGGTAATCCATCATGTGGTGATTGTGTTACTGTTACTTTGGGTTC-TATC 310
||||||| |||| |||| |||||| | | |||||||| ||||||| | ||||| | ||
Sbjct 1 ATGGAGTCTTCGTTAATTCATCATATTATCATTGTGTTGTTGTTACTCT-GGTTCATCTC 59
Query 311 TTACTTGAATCGATCACACGCGGTTTTCTATGTCCTCTCTCTCGTTTATCTTTACCTGGT 370
|| |||||||||||| ||||| |||||||| ||||| ||||| ||||||| ||||||||
Sbjct 60 TTCCTTGAATCGATCCCACGCCTTTTTCTATTTCCTCGCTCTCATTTATCTCTACCTGGT 119
Query 371 TCATGAACGCTATGTGATGAGATTGAGGAAGAA-ATTGCAGTTTGAAGAGAGGAAGCAAG 429
||| ||||| |||||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct 120 TCACGAACGGTATGTGATGAGATTGAAG-AGAACATTGCAGTTTGAAGAGAGGAAGCAAG 178
Query 430 CTAACCAGAGACGTGTTCTATCTGATTCTGAATCGGTGCGGTGGTTGAATCATGCCGTGG 489
||| |||||||| |||||||||||||||||||| ||| | ||| ||||| |||| ||||
Sbjct 179 CTAGTCAGAGACGGGTTCTATCTGATTCTGAATCTGTGAGATGGATGAATTATGCTGTGG 238
Query 490 AGAGGATATGGCCTATTTGTATGGAACAGATTGCTTCTCAGAAGATTCTTCGTCCGATCA 549
||| |||||||||||| || |||||||||||||| |||||||||||||| |||| || |
Sbjct 239 AGAAGATATGGCCTATATGCATGGAACAGATTGCCTCTCAGAAGATTCTGGGTCCAATAA 298
Query 550 TACCTTGGTTCTTGGACAAGTATAGACCTTGGACTGCGAAAAAAGTTGTGATACAACACC 609
|||||||||||||||| || |||||||||||||| |||||||||| ||||||||| ||||
Sbjct 299 TACCTTGGTTCTTGGAAAAATATAGACCTTGGACAGCGAAAAAAGCTGTGATACAGCACC 358
Query 610 TTTATTTGGGAAGAAACCCTCCTTTGTTGACAGATATTAGGGTTCTACGGCAATCTACGG 669
|||| ||||||||||||| ||| ||||||| |||||||||| || || ||||||||||
Sbjct 359 TTTACATGGGAAGAAACCCACCTCTGTTGACTCATATTAGGGTCCTTCGCCAATCTACGG 418
Query 670 GTGATGATCACTTGGTACTGGAACTTGGAATGAATTTCCTCACAGCAGATGATATGAGCG 729
||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| |
Sbjct 419 GTGATGATCACTTGGTATTGGAACTTGGAATGAATTTTCTCGCAGCAGATGATATGAGTG 478
Query 730 CAATACTCGCTGTGAAGTTAAGAAAAAGACTTGGGTTTGGAATGTGGACAAAGTTGCATT 789
||||||| |||||||| ||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct 479 CAATACTTGCTGTGAAATTAAGGAAAAGGCTTGGTTTTGGGATGTGGACAAAGTTGCATT 538
Query 790 TGACAGGAATGCATGTTGAAGGAAAGGTGTTGATTGGAGTGAAGTTCCTTCGTCGATGGC 849
|||| || ||||| || |||||||||||| | || |||||||||||||||||||| ||||
Sbjct 539 TGACGGGGATGCACGTGGAAGGAAAGGTGCTAATCGGAGTGAAGTTCCTTCGTCGGTGGC 598
Query 850 CTTTTCTCGGG-CGTTTACGAGTGTGTTTTGCAGAGCCACCTTATTTCCAAATGACTGTT 908
|||| || ||| |||||||| ||||||||||||||||| || |||||||| |||||||||
Sbjct 599 CTTT-CTTGGGGCGTTTACGTGTGTGTTTTGCAGAGCCTCCATATTTCCAGATGACTGTT 657
Query 909 AAACCAAT-TACCACTCATGGACTTGATGTTGCTGTGCTTCCAGGGATTGCAGGATGGCT 967
|||||||| | | ||||| || |||||||||||||| |||||||| || |||||||||||
Sbjct 658 AAACCAATCTTC-ACTCACGGGCTTGATGTTGCTGTACTTCCAGGTATCGCAGGATGGCT 716
Query 968 AGACAAACTT-TTGTCTGTTGCATTTGAGCAGACTCTTGTTGAGCCAAATATGCTGGTAG 1026
||| |||||| || ||| | |||||||| ||||| |||||| ||||||||||||| || |
Sbjct 717 AGATAAACTTCTT-TCTATCGCATTTGAACAGACCCTTGTTCAGCCAAATATGCTTGTTG 775
Query 1027 TTGATATGGAGAAATTTGTTAGCCCAGAGTCAGGAGATAATTGGTTCTTTGTTGATGAGA 1086
|||| ||||||||||||||||||| | | |||| | | || | |||| | |
Sbjct 776 TTGACATGGAGAAATTTGTTAGCCAAAA-TCAGAA-AGAAC-----CA--GTTGC--ACA 824
Query 1087 AAGAACC-AGTAGCACACGCTCTTGTTGAAGTCGTTGAAGCATGTGATGTTAAACCATCA 1145
| | ||| | | | | |||| | |||| | || | | |||| | ||||||||
Sbjct 825 C-GT-CTTAGTTG-A-A-G-TCTT-T-GAAG-CATT-A-G-ATGT--T---AAACCATCT 867
Query 1146 GATCTAAACGGTTTAGCTGATCCTTACGTGAAAGGGCAGCTTGGCGCTTACAGATTCAAA 1205
|||||||| ||||| ||||| ||||| ||||||||| | ||||| |||||| ||||||||
Sbjct 868 GATCTAAATGGTTTGGCTGACCCTTATGTGAAAGGGAAACTTGGTGCTTACCGATTCAAA 927
Query 1206 ACCAAGATACT-ATGGAAAACCTTGGCTCCCAAA-TGGCAAGAAGAGTTCAAGATACCAA 1263
||||||| || | | ||||| ||| | |||||| |||||||||||||| ||||||||||
Sbjct 928 ACCAAGACACAGAAG-AAAACATTGTC-CCCAAAATGGCAAGAAGAGTTTAAGATACCAA 985
Query 1264 TCTGCACATGGGACTC-CGCAAATATTCTTAACATTGAAGTTCAAGACAAAGACCGATTT 1322
||| ||||||||||| | ||| ||| |||||||||||||||| ||||||||||||||||
Sbjct 986 TCTTTACATGGGACTCTC-CAAGTATACTTAACATTGAAGTTCGAGACAAAGACCGATTT 1044
Query 1323 AGCG-ATGACAGTCTTGG-------C--GA-C--T--G--T-T-CAGTGAACATTGCAGA 1363
| | |||| | ||||| | || | | | | | ||||||| |||| |||
Sbjct 1045 -GTGGATGATACCCTTGGGTTTGTTCCTGAACCCTCTGAATGTTCAGTGAATATTGGAGA 1103
Query 1364 GTTTCGAGGCGGCCAAAGAAATGATATGTGGTTGCCTCTTCAGAACATTAAAATGGGGAG 1423
|||| |||||||||||||||| ||||||||||| ||||||||| |||| |||||||| ||
Sbjct 1104 GTTTAGAGGCGGCCAAAGAAACGATATGTGGTTACCTCTTCAGGACATCAAAATGGGAAG 1163
Query 1424 ATTGCACCTTGCTATAACCGTACTTGAGGA 1453
|||| ||||||||||| ||| |||||||
Sbjct 1164 GCTGCATCTTGCTATAACTGTAATTGAGGA 1193
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99377449205
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5