BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G14720.1
Length=2389
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478884 jgi|Araly1|478884|fgenesh2_kg.3__1585__AT3G14720.1 3404 0.0
Ahg474479 jgi|Araly1|474479|fgenesh2_kg.1__4433__AT1G53510.1 1530 0.0
> Ahg478884 jgi|Araly1|478884|fgenesh2_kg.3__1585__AT3G14720.1
Length=2355
Score = 3404 bits (1843), Expect = 0.0
Identities = 2225/2398 (93%), Gaps = 71/2398 (3%)
Strand=Plus/Plus
Query 2 tttttttttGAAGAAACAACAAAATTAGAATACACGGAAATT------AA-AAAGAAATC 54
||||||||||| |||||||||||||||||||||||||||||| || |||||||||
Sbjct 1 TTTTTTTTTGAGGAAACAACAAAATTAGAATACACGGAAATTAAAGAAAAGAAAGAAATC 60
Query 55 ACA----TTG-CTTATA-AAA--ACATTTCTCATCTTCAGATT--TTTATTTTCCTATCC 104
||| ||| ||||| ||| |||||||| ||||||||||| ||| || | | ||||
Sbjct 61 ACATTGGTTGTATTATATAAATCACATTTCTGATCTTCAGATTCCTTT-TTAT-CAATCC 118
Query 105 GTCTTTTCTCCGATCGCTGGATCTTGAAGATCTCTAGATTTTCTCATCTCTCTCTGTTCA 164
||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 119 GTCTTTTCTCCGATCGCTGGATCTTGAGGATCTCTAGATTTTCTCA-----------T-- 165
Query 165 CGGACTCTGTGTAGATAGAGTTCGTCTGTTTTTCGGAGTTCTTGT--GAGAATCTAGGGt 222
||| | | ||||| || |||| |||||||||||||||| ||||||||||||
Sbjct 166 ----CTC----T-G-TAGAG-TCCTCTGGTTTTCGGAGTTCTTGTGAGAGAATCTAGGG- 213
Query 223 ttttttCTTAAATCTCGATCGGGTTTTGGTTTCTGTGAtttttttttAAAATTTGTGATT 282
|||| | |||||||||||||||||||| |||||| || ||||||| ||||||||||
Sbjct 214 TTTTCTGGTAAATCTCGATCGGGTTTTGCTTTCTGGGA--TTTTTTT--GATTTGTGATT 269
Query 283 CGAAGAATTGCCATTTTCTTTGATTAGTCAT-ATTTTTTAATTGCGATCTCT-ACATAGA 340
|||||||||||||||||||||||||| | | ||||||| |||||||||||| || |||
Sbjct 270 CGAAGAATTGCCATTTTCTTTGATTA--CTTCATTTTTT-ATTGCGATCTCTAAC-GAGA 325
Query 341 GATCATCGAGGGG-TTT-TTAAATTGAATTTTTTGAAATTGACGAAGACGATAGAGTTGT 398
|||||| |||||| ||| |||||||| | ||||||||||||| |||||||||||||||||
Sbjct 326 GATCATTGAGGGGTTTTATTAAATTGGA-TTTTTGAAATTGAGGAAGACGATAGAGTTGT 384
Query 399 TGAGCGGTATTGATCTTTTGGTGTGAAGACGA-TAGAGT--T-TAAATTTGATTTGAAGA 454
||||||||||||||||| ||||||||| | | | | || | | ||| |||| ||||
Sbjct 385 TGAGCGGTATTGATCTTCTGGTGTGAA-A-TATTTG-GTCATCT-TTTTTTATTTAAAGA 440
Query 455 GGATGCAAAAAACTCAGGAGAAGAAGAACATGAAAGAGATGGAGTTTTTCACTGAGTATG 514
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441 GGATGCAACAAAGTCAGGAGAAGAAGAACATGAAAGAGATGGAGTTTTTCACTGAGTATG 500
Query 515 GTGATGCTAATCGTTATCGGATTCTTGAAGTTATTGGGAAAGGAAGCTATGGAGTTGTAT 574
||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 501 GTGATGCAAACCGTTATCGGATTCTTGAAGTCATTGGGAAAGGAAGCTATGGAGTTGTTT 560
Query 575 GTGCAGCTATTGATACACAAACAGGAGAGAAAGTTGCTATTAAGAAGATTAATGATGTTT 634
||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct 561 GTGCAGCTATTGATACACATACAGGAGAGAAAGTTGCGATAAAGAAGATTAATGATGTCT 620
Query 635 TTGAGCATGTCTCTGATGCTCTTCGTATTCTCCGTGAGGTTAAGCTTCTACGGCTTCTTA 694
|||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 621 TTGAACATGTCTCTGATGCTCTTCGTATCCTCCGTGAGGTTAAGCTTCTGCGGCTTCTTA 680
Query 695 GGCACCCTGATATAGTTGAAATCAAAAGTATCATGCTTCCGCCTTCTAAGAGGGAGTTTA 754
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 681 GGCACCCTGATATTGTTGAAATCAAAAGCATCATGCTTCCGCCTTCTAAGAGGGAGTTTA 740
Query 755 AAGATATATATGTTGTTTTTGAGCTCATGGAATCAGATCTTCATCAAGTCATCAAAGCTA 814
||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 741 AAGATATTTATGTGGTTTTTGAGCTCATGGAATCGGATCTTCACCAAGTCATCAAAGCTA 800
Query 815 ATGATGATTTGACTCGTGAGCATCACCAGTTTTTTCTTTATCAGATGCTTCGTGCTTTGA 874
| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 801 ACGATGATTTGACTCGTGAACACCACCAGTTTTTTCTTTATCAGATGCTTCGTGCTTTGA 860
Query 875 AGTATATGCATACAGCTAATGTTTACCATCGTGATCTTAAACCCAAGAACATACTGGCAA 934
||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct 861 AGTATATGCATACAGCTAATGTTTACCATCGCGATCTTAAACCGAAGAACATATTGGCAA 920
Query 935 ATGCAAACTGCAAGTTGAAAGTCTGTGACTTTGGACTTGCAAGAGTGTCGTTTAATGATA 994
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 921 ATGCAAACTGCAAGTTGAAAGTCTGTGACTTTGGACTAGCAAGAGTGTCGTTTAATGATA 980
Query 995 CACCTACGACAGTCTTTTGGACGGATTATGTTGCCACAAGATGGTACAGGGCACCTGAGC 1054
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 981 CACCTACAACAGTCTTTTGGACGGATTATGTTGCCACAAGATGGTACAGGGCACCGGAGC 1040
Query 1055 TCTGTGGATCATTCTGTTCTAAGTATACTCCAGCAATTGACATTTGGAGCATTGGCTGCA 1114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1041 TCTGTGGATCATTCTGTTCTAAGTATACTCCAGCAATTGACATTTGGAGCATTGGCTGCA 1100
Query 1115 TCTTCGCTGAGGTATTAACAGGGAAGCCTTTGTTTCCAGGAAAAAGTGTTGTCCATCAGT 1174
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1101 TCTTCGCTGAGGTATTAACAGGGAAGCCTTTGTTTCCTGGAAAAAGTGTCGTCCATCAGT 1160
Query 1175 TAGACTTGATTACCGATCTTCTTGGCACACCAAAATCAGAGACCATTGCTGGGGTGCGAA 1234
|||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 1161 TAGACTTGATTACCGATCTTCTTGGCACACCAAAATCAGAAACCATTGCTGGAGTTCGAA 1220
Query 1235 ATGAAAAGGCTAGAAAATATTTGAACGAAATGAGGAAGAAAAATCTTGTCCCCTTTTCGC 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221 ATGAAAAGGCTAGAAAATATTTGAACGAAATGAGGAAGAAAAATCTTGTCCCCTTTTCGC 1280
Query 1295 AAAAGTTTCCTAACGCAGATCCTTTAGCATTGCGTCTTCTGCAAAGACTGTTGGCTTTTG 1354
|||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 1281 AAAAGTTTCCTAACGCCGATCCTTTAGCATTGCGCCTTTTGCAAAGACTGTTGGCTTTTG 1340
Query 1355 ATCCAAAGGATAGGCCGACTGCTGCAGAGGCGCTGGCTGATCCTTATTTTAA-GTGCCTT 1413
|||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct 1341 ATCCAAAGGATAGGCCGACTGCTGCAGAGGCGCTGGCTGATCCTTACTTTAAGGT-CCTT 1399
Query 1414 GCTAAGGTTGAAAGAGAACCCTCTTGTCAGCCGATTTCGAAGATGGAATTTGAGTTTGAA 1473
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1400 GCTAAGGTTGAAAGAGAACCTTCTTGTCAGCCGATCTCGAAGATGGAATTTGAGTTTGAA 1459
Query 1474 AGAAGAAGGTTGACAAAGGATGACATTAGAGAACTAATATACAGGGAGATACTGGAATAC 1533
||| || |||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1460 AGACGACGGTTGACAAAGGATGATATTAGAGAACTAATATACAGGGAGATACTAGAATAC 1519
Query 1534 CATCCACAGCTGCTCAAGGATTATATGAACTCTGAAGGCTCAAGTTTTCTATATCCTAGT 1593
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1520 CATCCGCAGCTGCTCAAGGATTATATGAACTCTGAAGGCTCAAATTTTCTATATCCTAGT 1579
Query 1594 GCCATCGGTCATTTGAGGAAACAATTTGCGTACCTAGAGGAAAATAGTGGCAAAAGTGGG 1653
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1580 GCCATTGGTCATTTGAGAAAACAATTTGCATACCTAGAGGAAAATAGTGGCAAAAGTGGG 1639
Query 1654 CCAGTCATACCTCCAGACAGGAAGCATGCTTCACTTCCACGATCTGCAGTTCATTCCAGT 1713
|||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||
Sbjct 1640 CCAGTCATACCTCCAGACAGGAAGCATGCTTCACTTCCTCGATCTACAGTTCACTCCAGT 1699
Query 1714 GCAGTAAACTCCAACGCTCAACCCAGTTTAAACGCATCAGACAGTCGACGTGTTTCTATC 1773
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1700 GCAGTTAACTCCAACGCTCAACCCAGCTTAAACGCATCAGACAGTCGACGTGTTTCTATC 1759
Query 1774 GAACCTTCAAGAAATGGAGTGGTTCCATCAACTTCAGCATATTCAACTAAACCTTTAGGG 1833
|| ||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||
Sbjct 1760 GAGCCTTCAAGAAATGGAGTAGTTCCATCAACTTCAGCATATTCAACAAAACCTATAGGG 1819
Query 1834 CCTCCACCAAGAGTACCATCAGGTAAACCAGGCCGTGTTGTGGAATCATCTGTAACTTAT 1893
|||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 1820 CCTCCACCAAGAGTGCCATCAGGTAGACCAGGCCGCATTGTGGAATCATCTGTAACTTAT 1879
Query 1894 GAAAATGACAGAAACCTCAAAGAGTCGTCCTATGATGCAAGGACATCATATTACAGAAGC 1953
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1880 GAAAATGACAGAAACCTTAAAGAGTCGTCCTATGATGCAAGGACATCATATTACAGAAGC 1939
Query 1954 ACAGTACTCCCTCCACAGACCGTATCTCCTAACTGTTACTTCCTTCCAAACACCATGAAT 2013
|| |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct 1940 ACGGTACTCCCTCCACAGACCGTATCTCCTAACTGTTTCTTCCATCCTAACACCATGAAC 1999
Query 2014 CAAGAGAAGCGCAGTGGTACAGAAGCTGCATCTCAGCCAAAACCGCAGTTTGTCCCCACC 2073
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2000 CAAGAGAAGCGTGGTGGTACAGAAGCTGCATCTCAGCCAAAACCGCAGTTTGTCCCCACC 2059
Query 2074 CAATGCAACTCTGCCAAACCAGCTGAGCTGAACCCAAACCCTTATGTCCAATCACAACAC 2133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2060 CAATGCAACTCTGCCAAACCAGCTGAGCTGAACCCAAACCCTTATGTCCAATCACAACAC 2119
Query 2134 AAGGTGGGTATTGATGCTAAGCTGTTGCATGCACAATCCCAATATGGTCCTGCTGGAGCC 2193
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2120 AAGGTGGGTATTGATGCTAAGCTGCTGCATGCACAATCCCAATATGGTCCTGCTGGAGCC 2179
Query 2194 GCCGCGGTTGCAGTAGCAGCACACCGGAACATTGGAGCTGTTGGGTATGGCATGTCTTAG 2253
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2180 GCCGCGGTTGCAGTAGCAGCACACCGGAACATTGGCGCTGTTGGGTATGGCATGTCTTAG 2239
Query 2254 AATTTAGCACATTGGCGCTGTTGGCTATTGCCAGAAACTCCTCTTGTTATAGTCGTTATG 2313
||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| ||
Sbjct 2240 AATTTAGCATATTGGCGCTGTTGGCTATTGCCAGAAACTCTTCTTGTTA--GTCGTTTTG 2297
Query 2314 TAATGTAAGTATTATTCGATCAGGCCTGATTTGAACACATTTGAGATTGTAATAAAAA 2371
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2298 TGATGTAAGTATTATTCGATCAAGCCTGATTTGAACACATTTGAGATTGTAATAAAAA 2355
> Ahg474479 jgi|Araly1|474479|fgenesh2_kg.1__4433__AT1G53510.1
Length=2378
Score = 1530 bits (828), Expect = 0.0
Identities = 1291/1511 (85%), Gaps = 45/1511 (3%)
Strand=Plus/Plus
Query 437 TTAAATTTGATTTGAAGAGGATGCAA-AAAACTCAGGAGAAGAAGAACATGAAAGAGATG 495
|||||||| |||||||| ||||||| |||| ||| | ||||||| | ||||||||||
Sbjct 204 TTAAATTT-TTTTGAAGAAGATGCAACAAAA-TCAAGTGAAGAAGGGGACGAAAGAGATG 261
Query 496 GAGTTTTTCACTGAGTATGGTGATGCTAATCGTTATCGGATTCTTGAAGTTATTGGGAAA 555
|| |||||||| |||||||||||||||||| | ||||||||||| ||||||||||| |||
Sbjct 262 GAATTTTTCACAGAGTATGGTGATGCTAATAGATATCGGATTCTGGAAGTTATTGGTAAA 321
Query 556 GGAAGCTATGGAGTTGTATGTGCAGCTATTGATACACAAACAGGAGAGAAAGTTGCTATT 615
||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct 322 GGAAGCTATGGAGTTGTGTGTGCAGCTATTGATACACATACTGGAGAGAAAGTTGCTATT 381
Query 616 AAGAAGATTAATGATGTTTTTGAGCATGTCTCTGATGCTCTTCGTATTCTCCGTGAGGTT 675
|| |||||||||||||| ||||| ||| |||||||||| ||||||||||||||||| ||
Sbjct 382 AAAAAGATTAATGATGTCTTTGAACATATCTCTGATGCGCTTCGTATTCTCCGTGAAGTG 441
Query 676 AAGCTTCTACGGCTTCTTA-GGCACCCTGATATAGTTGAAATCAAAAGTATCATGCTTCC 734
|||||||| |||||| ||| |||| || ||||| || ||||||||||| || ||||| ||
Sbjct 442 AAGCTTCTTCGGCTT-TTACGGCATCCAGATATTGTGGAAATCAAAAGCATTATGCTGCC 500
Query 735 GCCTTCTAAGAGGGAGTTTAAAGATATATATGTTGTTTTTGAGCTCATGGAATCAGATCT 794
||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct 501 TCCTTCTAAGAGAGAGTTTAAAGACATTTATGTTGTGTTTGAGCTCATGGAATCAGATCT 560
Query 795 TCATCAAGTCATCAAAGCTAATGATGATTTGACTCGTGAGCATCACCAGTTTTTTCTTTA 854
||||||||| || |||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct 561 TCATCAAGTTATTAAAGCTAATGATGATTTGACTCGTGAACACCACCAGTTTTTCCTTTA 620
Query 855 TCAGATGCTTCGTGCTTTGAAGTAT-ATGCATACAGCTAATGTTTACCATCGTGATCTTA 913
|||||||||||||||||| |||| | |||||||| ||||||||||| |||||||||||||
Sbjct 621 TCAGATGCTTCGTGCTTTAAAGT-TCATGCATACTGCTAATGTTTATCATCGTGATCTTA 679
Query 914 AACCCAAGAACATACTGGCAAATGCAAACTGCAAGTTGAAAGTCTGTGACTTTGGACTTG 973
| || ||||| |||||||| |||||||| |||||||||||||| |||||||||||| |||
Sbjct 680 AGCCAAAGAATATACTGGCTAATGCAAATTGCAAGTTGAAAGTTTGTGACTTTGGA-TTG 738
Query 974 -CAAGAGT-GTCGTTTAATGATACACCTACGACAGTCTTTTGGACGGATTATGTTGCCAC 1031
| ||||| | ||||||||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct 739 GCTAGAGTAG-CGTTTAATGATACTCCTACAACAGTCTTTTGGACGGACTATGTTGCCAC 797
Query 1032 AAGATGGTACAGGGCACCTGAGCTCTGTGGATCATTCTGTTCTAAGTATACTCCAGCAAT 1091
||||||||| || ||||||||||||||||||||||||| ||| ||||| |||||||| ||
Sbjct 798 AAGATGGTATAGAGCACCTGAGCTCTGTGGATCATTCTTTTCGAAGTACACTCCAGCTAT 857
Query 1092 TGACATTTGGAGCATTGGCTGCATCTTCGCTGAGGTA-TTAACAGGGAAGCCTTTGTTTC 1150
|||||||||||||||||||||||||| || |||||| ||| |||||||||| |||||||
Sbjct 858 CGACATTTGGAGCATTGGCTGCATCTTTGCAGAGGTACTTA-CAGGGAAGCCATTGTTTC 916
Query 1151 CAGGAAAAAGTGTTGTCCATCAGTTAGACTTGATTACCGATCTTCTTGGCACACCAAAAT 1210
||||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct 917 CAGGAAAAAGTGTCGTCCATCAGTTGGAGTTGATTACTGATCTTCTTGGCACACCAAAAT 976
Query 1211 CAGAGACCATTGCTGGGGTGCGAAATGA-AAAGGCTAGAAAATATTTGAACGAAATGAGG 1269
|||| || ||| |||| || |||||||| |||| |||||||||| |||| ||||||||||
Sbjct 977 CAGAAACAATTTCTGGAGTTCGAAATGATAAAG-CTAGAAAATACTTGACCGAAATGAGG 1035
Query 1270 AAGAAAAATCTTGTCCCCTTTTCGCAAAAGTT-TCCTAACGCAGATCCTTTAGCATTGCG 1328
|||||||||| |||| |||| |||||||| || ||| || |||||||| |||||| | ||
Sbjct 1036 AAGAAAAATCCTGTCACCTTCTCGCAAAAATTCTCCAAA-GCAGATCCATTAGCACTCCG 1094
Query 1329 TCTTCTGCAAAGACTGTTGGCTTTTGATCCAAAGGATAGGCCGACTGCTGCAGAGGCGCT 1388
|||| |||| || ||||||||||| |||||||||||| | |||||| |||||||||| |
Sbjct 1095 TCTTTTGCAGAGGCTGTTGGCTTTCGATCCAAAGGATCGACCGACTCCTGCAGAGGCATT 1154
Query 1389 GGCTGATCCTTATTTTAAGTGCCTTGCTAAGGTTGAAAGAGAACCCTCTTGTCAGCCGAT 1448
|||||||||||| || ||| | ||| ||||||||||||||||||| || ||||||| ||
Sbjct 1155 GGCTGATCCTTACTTCAAGGGTCTTTCTAAGGTTGAAAGAGAACCTTCAAGTCAGCCAAT 1214
Query 1449 TTCGAAGATGGAATTTGAGTTTGAAAGAAGAAGGTTGACAAAGGATGACATTAGAGAACT 1508
||||||||||| ||||| ||||| ||| |||||||||||||||| ||||||||||||||
Sbjct 1215 CTCGAAGATGGAGTTTGAATTTGAGAGACGAAGGTTGACAAAGGACGACATTAGAGAACT 1274
Query 1509 AATATACAGGGAGATACTGGAATACCATCCACAGCTGCTCAAGGATTATATGAAC---TC 1565
||||||||| || || |||||||||||||| ||| |||||||||||||||||| | ||
Sbjct 1275 AATATACAGAGAAATCCTGGAATACCATCCTCAGTTGCTCAAGGATTATATGAGCGGATC 1334
Query 1566 TGAAGGCTC-AAGTTTTCTATATCCTAGTGCCATCGGTCAT-TTGAGGAAA-CAATTTGC 1622
||| || || || |||| |||||||||| ||||| || ||| || || | | || || |
Sbjct 1335 TGAGGGGTCTAA-TTTTGTATATCCTAGCGCCATTGGACATCTT-AG-ACAGCAGTTCAC 1391
Query 1623 GTACCTAGAGGAAAATAGTGGCA-AAAGTGGGCCAGTCATACCTC-CAGACAGGAAGCAT 1680
||| |||||||||||||| ||| ||| |||||| |||||||||| | || ||||| |||
Sbjct 1392 TTACTTAGAGGAAAATAGTAGCAGAAA-TGGGCCGGTCATACCTCTC-GAGAGGAAACAT 1449
Query 1681 GCTTCACTTCCACGATCTGCAGTTCATTCCAGTGCAGTAAACTCCAACGCTCAACCCAGT 1740
|| || ||||| || ||| | ||||| || | || ||| | |||| | | |||||||
Sbjct 1450 GCATCGCTTCCGCGGTCTACGGTTCACTCAACTGTAGTCCATTCCACCACACAACCCAAC 1509
Query 1741 TTAAACGCATCAGACAGTCGACGTGTTTCTATCGAACCTTCAAGAAATGGAGT------- 1793
|| | ||| |||| ||| |||||||| || |||| ||||||| |||||||||
Sbjct 1510 TTGAGTGCAACAGATAGTAGACGTGTTACTTTCGAGCCTTCAAAAAATGGAGTTCCTTCT 1569
Query 1794 G--GT---TCCATCAACTTCAGCATATTCAACTAAACCTTTAGGGCCTCCACCAAGAGT- 1847
| | |||||||||||| || ||| | |||||| || | || ||||||||||| ||
Sbjct 1570 GCAGGACATCCATCAACTTCCGCGTATCCTACTAAATCTATCGGACCTCCACCAAGGGTT 1629
Query 1848 --ACCATCAGGTAAACCAGGCCGTGTTGTGGAATCATCTGTAACTTATGAAAATGACAGA 1905
||||||||||| |||||| || |||||||||||||||||| ||||||| |||| |||
Sbjct 1630 CCACCATCAGGTAGACCAGGTCGAGTTGTGGAATCATCTGTATCTTATGAGAATGGCAGG 1689
Query 1906 AACCTCAAAGA 1916
|||||||||||
Sbjct 1690 AACCTCAAAGA 1700
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90007248935
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5