BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G14790.1
Length=2348
Score E
Sequences producing significant alignments: (Bits) Value
Ahg478892 jgi|Araly1|478892|fgenesh2_kg.3__1593__AT3G14790.1 3513 0.0
Ahg474478 jgi|Araly1|474478|fgenesh2_kg.1__4432__AT1G53500.1 1940 0.0
> Ahg478892 jgi|Araly1|478892|fgenesh2_kg.3__1593__AT3G14790.1
Length=2285
Score = 3513 bits (1902), Expect = 0.0
Identities = 2152/2271 (95%), Gaps = 23/2271 (1%)
Strand=Plus/Plus
Query 42 ttttatttatttccattgatctctctcctctcctcgatttttccctcc-tttaatccatc 100
||||||||||||||||||||||||| ||||||||||| |||||||||| ||||| |||||
Sbjct 1 TTTTATTTATTTCCATTGATCTCTCCCCTCTCCTCGAATTTTCCCTCCTTTTAAACCATC 60
Query 101 tctGC--ATATTCTTCAAGCTT--GGGTTCATCTTCATCTTG--ATCTGAAT-CGATCCG 153
||||| ||||||||||||||| || || ||||||||| || ||| | || || | ||
Sbjct 61 TCTGCATATATTCTTCAAGCTTAAGGTTTGATCTTCATC-TGAAATC-G-ATCCGGTACG 117
Query 154 ATGGCTACATATAAGCCTAAGAACATCCTCATCACTGGGGCTGCTGGATTCATAGCCTCT 213
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 118 ATGGCTACATATAAGCCCAAGAACATCCTCATCACTGGTGCTGCTGGATTCATAGCCTCC 177
Query 214 CATGTTGCTAACAGACTAGTTCGCAGCTACCCTGACTACAAAATTGTTGTGCTTGACAAG 273
|||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 178 CATGTTGCCAACAGACTAGTTCGTAGCTACCCTGACTACAAAATCGTTGTGCTTGACAAG 237
Query 274 CTTGATTACTGTTCTAATCTGAAGAACCTTAATCCTTCTAAATCCTCTCCCAACTTCAAG 333
||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||
Sbjct 238 CTTGATTACTGTTCTAACCTGAAAAACCTTAATCCTTCTAAATCCTCTCCTAACTTCAAG 297
Query 334 TTTGTGAAAGGAGATATCGCCAGTGCTGATCTCGTCAACTACCTTCTCATCACTGAAGAA 393
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 298 TTTGTGAAAGGAGATATCGCCAGTGCTGACCTCGTCAACTACCTTCTCATCACTGAAGAA 357
Query 394 ATCGACACCATTATGCACTTTGCTGCTCAAACCCATGTTGACAATTCTTTCGGTAATAGC 453
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 ATCGATACCATTATGCACTTTGCTGCTCAAACCCATGTTGACAATTCTTTCGGTAATAGC 417
Query 454 TTTGAGTTTACCAAGAACAATATTTATGGTACCCATGTCCTTTTGGAAGCTTGTAAAGTC 513
||||||||||| ||||| |||||||||||||||||||| ||| |||| ||||||||||||
Sbjct 418 TTTGAGTTTACTAAGAATAATATTTATGGTACCCATGTTCTTCTGGAGGCTTGTAAAGTC 477
Query 514 ACTGGCCAGATCAGGAGGTTCATCCATGTGAGTACTGATGAGGTCTATGGAGAGACTGAT 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 ACTGGCCAGATCAGGAGGTTCATCCATGTGAGTACTGATGAGGTCTATGGAGAGACTGAT 537
Query 574 GAGGATGCTTCAGTGGGTAATCACGAGGCTTCTCAGTTGCTCCCAACTAATCCATACTCC 633
||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct 538 GAGGATGCTTCTGTGGGAAATCACGAGGCTTCTCAGTTGCTACCGACTAATCCATACTCT 597
Query 634 GCCACTAAAGCTGGAGCTGAGATGCTTGTCATGGCATATGGTAGATCATATGGGTTGCCG 693
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 598 GCTACTAAAGCTGGAGCTGAGATGCTTGTTATGGCATATGGTAGATCATATGGGTTGCCG 657
Query 694 GTTATAACAACTCGCGGGAACAATGTTTATGGTCCTAACCAGTTTCCTGAAAAGTTGATT 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 GTTATAACAACTCGCGGGAACAATGTTTATGGTCCTAACCAGTTTCCTGAAAAGTTGATT 717
Query 754 CCTAAGTTCATCCTCTTGGCCATGAATGGGAAGCCTCTCCCAATCCACGGAGATGGATCT 813
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 718 CCTAAGTTCATCCTCTTGGCTATGAATGGGAAGCCTCTCCCAATCCACGGAGATGGATCT 777
Query 814 AATGTGAGAAGTTATCTCTACTGCGAAGATGTTGCTGAGGCATTTGAGGTTGTTCTTCAC 873
||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 778 AATGTGAGAAGCTACCTCTACTGCGAAGATGTTGCCGAGGCATTTGAGGTTGTTCTTCAC 837
Query 874 AAAGGGGAAGTTAACCATGTCTACAATATAGGGACAACGAGAGAAAGGAGAGTGATTGAT 933
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 838 AAAGGGGAAGTTAACCATGTCTACAATATAGGGACAACGAGAGAAAGGAGAGTGATCGAC 897
Query 934 GTGGCTAATGACATCAGTAAACTCTTTGGGATAGACCCTGACTCCACCATTCAGTATGTG 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 898 GTGGCTAATGACATCAGTAAACTCTTTGGGATAGACCCTGACTCCACCATTCAGTTTGTG 957
Query 994 GAAAACCGGCCATTCAATGACCAGAGGTACTTCCTCGATGACCAGAAGCTGAAGAAATTA 1053
|| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 958 GAGAACCGCCCATTCAATGACCAGAGGTACTTTCTGGATGACCAGAAGCTGAAGAAATTG 1017
Query 1054 GGATGGTGTGAGCGAACCAATTGGGAAGAAGGACTGAGGAAGACAATGGAATGGTATACT 1113
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1018 GGATGGTGTGAGCGAACCAATTGGGAAGAAGGACTGAGGAAGACAATGGAATGGTACACT 1077
Query 1114 GAGAACCCTGAGTGGTGGGGCGATGTTTCTGGAGCTCTGCTTCCTCATCCACGGATGTTG 1173
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 1078 GAGAACCCTGAGTGGTGGGGAGATGTTTCTGGAGCTCTGCTTCCTCATCCACGGATGCTG 1137
Query 1174 ATGATGCCCGGTGACCGACACTCTGATGGCTCTGACGAGCACAAGAA-TGCAGATGGTAA 1232
|||||||||||||||||||||||||| |||||||||||||||||| | | | ||||||||
Sbjct 1138 ATGATGCCCGGTGACCGACACTCTGACGGCTCTGACGAGCACAAGGACT-CGGATGGTAA 1196
Query 1233 TCAGACATTCACGGTGGTTACTCCCACCAAGGCTGGTTGTT-CCGGAGACAAAAGATCCT 1291
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 1197 TCAGACATTCACGGTGGTTACTCCCACCAAGGCTGGT-GTTTCCGGAGACAAAAGATCCT 1255
Query 1292 TGAAGTTCCTCATCTATGGGAAGACTGGGTGGCTCGGTGGTCTTCTGGGAAAACTATGTG 1351
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 TAAAGTTCCTCATCTATGGGAAGACTGGGTGGCTCGGTGGTCTTCTGGGAAAACTATGTG 1315
Query 1352 AGAAACAAGGGATTCCTTACGAGTATGGAAAAGGAAGACTAGAGGATAGAGCTTCTCTCA 1411
|||| ||||||||| | ||||||||||||||||| |||||||| || || ||||||||||
Sbjct 1316 AGAAGCAAGGGATTTCATACGAGTATGGAAAAGGGAGACTAGAAGACAGGGCTTCTCTCA 1375
Query 1412 TCGCAGATATTCGCAGCATCAAACCAAGTCATGTCTTCAACGCCGCTGGTTTAACTGGGA 1471
| || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct 1376 TGGCCGATATTCGCAGCATCAAACCAAGTCATGTCTTCAATGCCGCCGGTTTAACTGGCA 1435
Query 1472 GACCCAATGTTGACTGGTGTGAATCTCACAAAACTGAAACCATCCGAGTCAACGTTGCTG 1531
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1436 GACCCAATGTTGACTGGTGTGAATCTCACAAAACCGAAACCATCCGAGTCAATGTTGCTG 1495
Query 1532 GAACTTTGACTCTTGCAGATGTTTGCAGAGAGAATGATCTGTTGATGATGAACTTTGCCA 1591
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1496 GAACTTTGACTCTGGCAGATGTTTGCAGAGAGAATGATCTATTGATGATGAACTTTGCCA 1555
Query 1592 CTGGTTGTATATTCGAGTATGACGCTGCACATCCAGAAGGTTCAGGGATTGGTTTTAAGG 1651
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 CCGGTTGTATATTTGAGTATGACGCTGCACATCCAGAAGGTTCAGGGATTGGTTTTAAGG 1615
Query 1652 AAGAAGATAAACCGAATTTCACTGGTTCTTTCTACTCAAAAACAAAGGCAATGGTGGAAG 1711
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1616 AAGAAGATAAACCTAATTTCACTGGTTCTTTCTACTCAAAAACAAAGGCAATGGTTGAAG 1675
Query 1712 AGCTTCTAAGAGAATTTGACAACGTATGCACCTTGAGAGTGCGGATGCCAATCTCATCTG 1771
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1676 AGCTTCTAAGAGAATTTGACAACGTATGCACTTTGAGAGTGCGGATGCCAATCTCATCCG 1735
Query 1772 ACTTAAATAACCCGCGAAACTTCATCACGAAGATCTCGCGTTACAACAAAGTGGTGAACA 1831
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1736 ACTTAAATAACCCGCGAAACTTTATCACGAAGATCTCGCGTTACAACAAAGTGGTGAACA 1795
Query 1832 TTCCAAACAGCATGACCATACTAGATGAACTCTTACCAATCTCGATCGAGATGGCGAAGA 1891
| ||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||
Sbjct 1796 TCCCAAACAGCATGACCATACTAGACGAACTCTTGCCAATCTCAATTGAGATGGCGAAGA 1855
Query 1892 GGAACCTAAGGGGAATATGGAACTTCACCAATCCAGGAGTGGTGAGCCACAACGAGATAT 1951
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856 GGAACTTAAGGGGAATATGGAACTTCACCAATCCAGGAGTGGTGAGCCACAACGAGATAC 1915
Query 1952 TAGAGATGTACAAGAGTTACATCGAGCCTGATTTCAAATGGTCCAACTTCAATTTGGAAG 2011
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1916 TAGAGATGTACAAGAGTTACATTGAGCCGGATTTCAAATGGTCCAACTTCAATTTGGAAG 1975
Query 2012 AACAGGCTAAGGTCATTGTTGCTCCACGGAGCAACAACGAGATGGATGGTGCCAAGCTCA 2071
||||||||||||||||||| || ||||||||||||||||||||||||||| | |||||||
Sbjct 1976 AACAGGCTAAGGTCATTGTCGCACCACGGAGCAACAACGAGATGGATGGTTCTAAGCTCA 2035
Query 2072 GCAAGGAGTTTCCAGAGATGCTTTCCATCAAAGATTCGTTGATCAAATACGTCTTCGAAC 2131
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2036 GCAAGGAGTTTCCAGAGATGCTTTCCATCAAAGATTCGTTGATCAAATACGTCTTTGAAC 2095
Query 2132 CTAACAAGAGAACGTAAAACACAGACACACACACGCACTTCCCCGCTCTGTGTTCACTAT 2191
||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||
Sbjct 2096 CTAACAAGAGAACGTAAAACACAGACACACACAT--ACTTCCCCTCTCTCTGTTCACTAT 2153
Query 2192 AATGTTTCTACTATAGTTTTATC-T--GATTCATTTACTCTCtttttttGCATTCTACGA 2248
||||||||||| ||| ||||||| | |||||||||||||| ||||| ||||||||||
Sbjct 2154 AATGTTTCTACAATAATTTTATCATATGATTCATTTACTCT-TTTTT--GCATTCTACGC 2210
Query 2249 CTTGCATGTAGCTGTCTTCACTCATTCTACGTCACAACACATCTTTGTTTT 2299
||| ||||||||| |||||||||||||||| |||| |||||||||||||||
Sbjct 2211 CTTACATGTAGCTCTCTTCACTCATTCTACTTCACTACACATCTTTGTTTT 2261
> Ahg474478 jgi|Araly1|474478|fgenesh2_kg.1__4432__AT1G53500.1
Length=2520
Score = 1940 bits (1050), Expect = 0.0
Identities = 1709/2023 (84%), Gaps = 61/2023 (3%)
Strand=Plus/Plus
Query 158 CTACATATAAGCCTAAGAACATCCTCATCACTGGGGCTGCTGGATTCATAGCCTCTCATG 217
|||| |||||||| |||||||| ||||| ||||| |||||||||||||| || |||||||
Sbjct 316 CTACGTATAAGCCAAAGAACATTCTCATTACTGGAGCTGCTGGATTCATTGCTTCTCATG 375
Query 218 TTGCTAACAGACTAGTTCGCAGCTACCCTGACTACAAAATTGTTGTGCTT-GACAAGCTT 276
|||| |||||| || | || ||||| ||||| ||||| || |||||| || |||||||||
Sbjct 376 TTGCCAACAGATTAATCCGTAGCTATCCTGATTACAAGATCGTTGTG-TTGGACAAGCTT 434
Query 277 GATTACTGTTCTA-ATCTGAAGAACCTTAATCCTTCTA-AATCCTCTCCCAACTTCAAGT 334
||||||||||| | |||||||||| ||| ||||||| | || || || ||||||||||
Sbjct 435 GATTACTGTTC-AGATCTGAAGAATCTTGATCCTTC-ATTTTCTTCACCAAACTTCAAGT 492
Query 335 TTGTGAAAGGAGATATCGCCAGTGCTGATCTCGTCAACTACCTTCTCATCACTGAAGAA- 393
|||| |||||||||||||| |||| ||||||||| |||||||||||||| |||||| ||
Sbjct 493 TTGTCAAAGGAGATATCGCTAGTGATGATCTCGTTAACTACCTTCTCATTACTGAA-AAC 551
Query 394 ATCGACACCATTATGCACTTTGCTGCTCAAACCCATGTTGACAATTCTTTCGGTAATAGC 453
|| || || || ||||| |||||||||||||| |||||||| || ||||| |||||||||
Sbjct 552 ATTGATACGATAATGCATTTTGCTGCTCAAACTCATGTTGATAACTCTTTTGGTAATAGC 611
Query 454 TTTGAGTTTACCAAGAACAATATTTATGGTACCCATGTCCTTTTGGAAGCTTGTAAAGTC 513
||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||||||
Sbjct 612 TTTGAGTTTACCAAGAACAATATCTATGGTACTCATGTTCTTTTGGAAGCCTGTAAAGTT 671
Query 514 ACTGGCCAGATCAGGAGGTTCATCCATGTGAGTACTGATGAGGTCTATGGAGAGACTGAT 573
|| || |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||
Sbjct 672 ACAGGACAGATCAGGAGGTTTATCCATGTGAGTACCGATGAAGTCTATGGAGAAACCGAT 731
Query 574 GAGGATGCTTCAGTGGGTAATCACGAGGCTTCTCAGTTGCT--CCCAACTAATCCATACT 631
||||||||| | || || || || || ||||| ||| | || |||| | ||||| ||||
Sbjct 732 GAGGATGCTGCTGTAGGAAACCATGAAGCTTCACAGCT-CTTACCCA-CGAATCCCTACT 789
Query 632 CCGCCACTAAAGCTGGAGCTGAGATGCTTGTCATGGCATATGGTAGATCATATGGGTTGC 691
| |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct 790 CTGCCACTAAGGCTGGTGCTGAGATGCTTGTGATGGCTTATGGTAGATCATATGGATTGC 849
Query 692 CGGTTATAACAACTCGCGGGAACAATGTTTATGGTCCTAACCAGTTTCCTGA-AAAGTTG 750
| ||||| || ||||||||||||||||||||||| ||||||||||||||||| ||| | |
Sbjct 850 CTGTTATTACCACTCGCGGGAACAATGTTTATGGGCCTAACCAGTTTCCTGAGAAAAT-G 908
Query 751 ATTCCTAAGTTCATCCTCTTGGCCATGAATGGGAAGCCTCT-CCCAATCCACGGAGATGG 809
||||||||||||||| | ||||| |||| ||||||||| || |||| |||| ||||||||
Sbjct 909 ATTCCTAAGTTCATCTTGTTGGCTATGAGTGGGAAGCCGCTTCCCA-TCCATGGAGATGG 967
Query 810 ATCTAATGTGAGAAGTTATCTC-TACTGCGAAGATGTTGCTGAGGCATTTGAGGTTGTTC 868
||||||||| | ||||| || ||||| ||||| ||||||||||| |||||||||||||
Sbjct 968 ATCTAATGTCCGGAGTTA-CTTGTACTGTGAAGACGTTGCTGAGGCTTTTGAGGTTGTTC 1026
Query 869 TTCACAAAGGGGAAGTTAACCATGTCTACAATATAGGGACAACGAGAGAAAGGAGAGTGA 928
|||||||||| ||| | ||||||||||||||| || |||| |||||||||||||||||
Sbjct 1027 TTCACAAAGGAGAAATCGGCCATGTCTACAATATCGGTACAAAGAGAGAAAGGAGAGTGA 1086
Query 929 TTGATGTGGCTA-ATGACATCAGTAAACTCTTT-GGGATAGACCCTGACTCCACCATTCA 986
| |||||||||| | |||||| | ||||| ||| |||| ||||||||| || | ||||||
Sbjct 1087 TCGATGTGGCTAGA-GACATCTGCAAACT-TTTCGGGAAAGACCCTGAGTCAAGCATTCA 1144
Query 987 GTATGTGGAAAACCGGCCATTCAATGACCAGAGGTACTTCCTCGATGACCAGAAGCTGAA 1046
|| ||| || ||||| || || ||||| || ||||||||||| ||||| |||||||||||
Sbjct 1145 GTTTGTTGAGAACCGACCCTTTAATGATCAAAGGTACTTCCTTGATGATCAGAAGCTGAA 1204
Query 1047 GAAATTAGGATGGTGTGAGCGAACCA-ATTGGGAAGAAGGACTGAGGAAGACAATGGAAT 1105
|||||| |||||| |||||||| | || ||||||| ||||||| |||||||||||| |
Sbjct 1205 GAAATTGGGATGGCAAGAGCGAACAACAT-GGGAAGATGGACTGAAGAAGACAATGGACT 1263
Query 1106 GGTATACTGAGAACCCTGAGTGGTGGGGCGATGTTTCTGGAGCTCTGCTTCCTCATCCAC 1165
|||| ||| |||| |||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1264 GGTACACTCAGAATCCTGAGTGGTGGGGTGATGTTTCTGGAGCTTTGCTTCCTCATCCAA 1323
Query 1166 GGATG-TTGATGATGCCCGGTG-ACCGACACTCTGATGGCTCT-GACGAGCACAA-GAA- 1220
| ||| || ||||||||||||| | ||| |||||||| ||| | ||| | || ||
Sbjct 1324 GAATGCTT-ATGATGCCCGGTGGAA-GACTTTCTGATGGATCTAGT-GAGAAGAAAGACG 1380
Query 1221 -TGCAGATGGTA-A---TC-AGACATTCACGGTGGTTACTCCCACCAAGGCTGGTTGTTC 1274
|||| | | | | || ||||||| ||||| || || || | | || |||| ||||
Sbjct 1381 CTGCA-A-GCAACACGGTCCAGACATTTACGGTTGTAACACCTA--AGGG-TGGTGGTTC 1435
Query 1275 CGGAGACAAAAGATCC-TTGAAGTTCCTCATCTATGGGAAGACTGGGTGGCTCGGTGGTC 1333
|| |||||| | | | |||||||| | |||||||| ||||| || ||||| |||||||
Sbjct 1436 TGGTGACAAA-GCTTCGTTGAAGTTTTTGATCTATGGTAAGACCGGTTGGCTTGGTGGTC 1494
Query 1334 TTCT-GGGAAAACTATGTGAGAAACAAGGGATTCCTTACGAGTATGGAAAAGGAAGACTA 1392
|||| |||||| ||||||||||| ||||||||| | || |||||||| |||||| | |
Sbjct 1495 TTCTAGGGAAA-CTATGTGAGAAGCAAGGGATTACATATGAGTATGGGAAAGGACGTTTG 1553
Query 1393 GAGGATAGAGCTTCTCTCATCGCAGATATTCGCAGCATCAAACCAAGTCATGTCTTCAAC 1452
||||||||||||||||| | || |||||||| ||||||||||| | ||||||||| ||
Sbjct 1554 GAGGATAGAGCTTCTCTTGTGGCGGATATTCGTAGCATCAAACCTACTCATGTCTTTAAT 1613
Query 1453 GCCGCTGGTTTAACTGGGAGACCCAATGTTGACTGGTGTGAATCTCACAAAACTGAAACC 1512
|| |||||||||||||| |||||||| |||||||||||||||||||||||| | || |||
Sbjct 1614 GCTGCTGGTTTAACTGGCAGACCCAACGTTGACTGGTGTGAATCTCACAAACCAGAGACC 1673
Query 1513 ATCCGAGTCAACGTTGCTGGAACTTTGACTCTTGCAGATGTTTGCAGAGAGAATGATCTG 1572
|| || || || || ||||| ||||||||||| || |||||||||||||||||||||||
Sbjct 1674 ATTCGCGTAAATGTCGCTGGTACTTTGACTCTAGCTGATGTTTGCAGAGAGAATGATCTC 1733
Query 1573 TTGATGATGAACTTTGCCACTGGTTGTATATTCGAGTATGACGCTGCACATCCAGAAGGT 1632
|||||||||||||||||||| ||||| || || |||||||| ||||||||||| || |||
Sbjct 1734 TTGATGATGAACTTTGCCACCGGTTGCATCTTTGAGTATGATGCTGCACATCCTGAGGGT 1793
Query 1633 TCAGGG-ATTGGTTTTAAGGAAGAAGATAAACCGAATTTCACTGGTTCTTTCTACTCAAA 1691
|| ||| || ||||| ||||||||||| || || |||||| ||||||||||||||| ||
Sbjct 1794 TC-GGGTATAGGTTTCAAGGAAGAAGACAAGCCAAATTTCTTTGGTTCTTTCTACTCGAA 1852
Query 1692 AAC-AAAGGCAATGGTGGAAGAGCTTCTA-AGAGAATTTGACAACGTATGCACCTTGAGA 1749
||| |||| || |||| || ||||| || ||||||| |||||| ||||| |||||||||
Sbjct 1853 AACCAAAGCCA-TGGTTGAGGAGCT-CTTGAGAGAATATGACAATGTATGTACCTTGAGA 1910
Query 1750 GTGCGGATGCCAATCTCATCTGACTTAAATAACCCGCGAAACTTCATCACGAAGATCTCG 1809
|| |||||||||||||| || ||| |||| ||||| ||||||||||||||||||||||
Sbjct 1911 GTCCGGATGCCAATCTCCTCAGACCTAAACAACCCAAGAAACTTCATCACGAAGATCTCA 1970
Query 1810 CGTTACAACAAAGTGGTGAACATTCCAAACAGCATGACCATACTAGATGAACT-CTTACC 1868
|| ||||||||||||||| |||| || ||||||||||||||||| || || || || ||
Sbjct 1971 CGCTACAACAAAGTGGTGGACATCCCGAACAGCATGACCATACTGGACGAGCTTCTC-CC 2029
Query 1869 AATCTCGATCGAGATGGCGAAGAGGAACCTAAG-GGGAATATGGAACTTCACCAATCCAG 1927
||||| ||||||||||||||||| |||||||| |||| |||||||||||||||| ||||
Sbjct 2030 GATCTCCATCGAGATGGCGAAGAGAAACCTAAGAGGGA-TATGGAACTTCACCAACCCAG 2088
Query 1928 GAGTGGTGAGCCACAACGAGATATTAGAGATGTACAAGAGTTACATCGAGCCTGATTTCA 1987
| ||||||||||||||||||||| | ||||||||||||| |||||||||||| | ||| |
Sbjct 2089 GGGTGGTGAGCCACAACGAGATACTGGAGATGTACAAGAATTACATCGAGCCAGGTTTTA 2148
Query 1988 AATGGTCCAACTTCA-ATTTGGAAGAACAGGCTAAGGTCATTGTTGCTCCACGGAGCAAC 2046
||||||||||||| | ||| ||||||||| || ||||||||||||||| | || ||||||
Sbjct 2149 AATGGTCCAACTTTACATT-GGAAGAACAAGCAAAGGTCATTGTTGCTGCGCGAAGCAAC 2207
Query 2047 AACGAGATGGATGG-TGCCAAGCTCAGCAAGGAGTTTCCAGAGATGCTTTCCATCAAAGA 2105
||||| |||||||| | | || || ||||||||||| ||||||||||| ||||||||||
Sbjct 2208 AACGAAATGGATGGAT-CTAAACTAAGCAAGGAGTTCCCAGAGATGCTACCCATCAAAGA 2266
Query 2106 TTCGTTGATCAAATACGTCTTCGAACCTAACAAGAGAACGTAA 2148
|| |||||||||||||||| ||||| ||||||||||| |||
Sbjct 2267 GTCACTGATCAAATACGTCTTTGAACCAAACAAGAGAACCTAA 2309
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88445548890
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5