BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G15470.1
Length=3370
Score E
Sequences producing significant alignments: (Bits) Value
Ahg929351 jgi|Araly1|929351|scaffold_301808.1 4340 0.0
Ahg359594 jgi|Araly1|359594|fgenesh1_pg.C_scaffold_450000001 1803 0.0
> Ahg929351 jgi|Araly1|929351|scaffold_301808.1
Length=2699
Score = 4340 bits (2350), Expect = 0.0
Identities = 2592/2707 (96%), Gaps = 23/2707 (1%)
Strand=Plus/Plus
Query 327 GCTGGCTTCATCACAGCTACGACCATGAGCTACCAAAACGAGGAAGAAGAGGAAGGAGGA 386
||||||||||| |||||||||||||||||||| |||||||||||||||| | ||||
Sbjct 1 GCTGGCTTCAT---TGCTACGACCATGAGCTACCACAACGAGGAAGAAGAGG-A--AGGA 54
Query 387 GACACCAACGATTGCTTCTACGAGTCTCTTGATCGTTTAGCTTCTTCCTCTTCTTGCTCT 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 55 GACACCAACGATTGCTTCTACGAGTCTCTTGATCGTTTAGCTTCTTCCTCTTCTTGCTCT 114
Query 447 TGTTCCGCTTCTAACTCTGATTACGATTCCGAATCCTCTCCTCGGATCTCCTCCGCCGCT 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 115 TGTTCCGCTTCTAACTCTGATTACGATTCCGAATCCTCTCCTCGGATCTCCTCCGCCGCT 174
Query 507 TCTCATGACTCTGAAGAACTCTACGGTGGTGGTCGCCGCCGTCGATACCCATTCCCTGTT 566
||||||||| ||||||||| | ||||||| ||||||||||| ||||| |||||||| |||
Sbjct 175 TCTCATGACCCTGAAGAACACAACGGTGGGGGTCGCCGCCGCCGATATCCATTCCCAGTT 234
Query 567 CCTCGGTTTCCAATGGGAGCTTCGAAGTTCGACGTTTGGACCTCTGAACCTGCTTCTGTC 626
|||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||
Sbjct 235 CCTCGGTTTCCAATGGGAGCCTCAAAGTTCGACGTTTGGATCTCTGAACCTGCTTCTGTC 294
Query 627 TCTGAGAGGCGTTCCAAGCTTTTAAACGAAATGGGTCTTAGCCGTGACCCGGTTCTCTCC 686
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 TCCGAGAGACGTTCCAAGCTTTTAAACGAAATGGGTCTTAGCCGTGACCCGGTTCTCTCC 354
Query 687 CGGTTAAAACCCGTTTCAGATTCTTCCAGCTCCAAAGATACCGGAGCCGCCGGCTTCGAG 746
||||||||||||||||| || ||||||||||||||| ||||||| | | ||| |||
Sbjct 355 CGGTTAAAACCCGTTTCGGA---TTCCAGCTCCAAAGAAACCGGAGAAGGCAGCTCCGAC 411
Query 747 ATTTCTCGATCGATCTCGTGTAATCAATTGGCTCGGCGAGATCATGGAGAGTGTTCTGAA 806
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 412 ATTTCCCGATCGATCTCGTGTAATCAATTGGCTCGGCGAGATCATGGAGAGTGTTTTGAA 471
Query 807 AGTGTCGGCGGTTGTGCTTCTTGTATCGTGAGATCGAAATCCGACATTACCACTAGCCAA 866
| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 472 ACTGTCGGCGGTTGTGCTTCTTGCATCGTGAGATCGAAATCCGACATTACCACTAGCCAA 531
Query 867 TGTGGTGATCGTGACCGTCGATATACGTCTCCTGGTAATCCTTGTTCTTGTTCCGTCTCT 926
|||||||||||||| |||||||||||||||| ||||||| ||||||||||||| ||||||
Sbjct 532 TGTGGTGATCGTGAACGTCGATATACGTCTCTTGGTAATTCTTGTTCTTGTTCAGTCTCT 591
Query 927 AAACTCTCTGTTCATCATTCTTCACATTCAGAGATCAGTAGAACCAGCTCGCCATTTGTG 986
||||||||||||| |||| ||||||||||||||||||||||||||||| | ||||||||
Sbjct 592 AAACTCTCTGTTCGTCATCCTTCACATTCAGAGATCAGTAGAACCAGCCCACCATTTGTC 651
Query 987 AATTGCAGTGTAGGATCAGTTA--G-TG---C---T--G-ATTCATTGCGGTTAAATGGA 1034
||||||||| | |||||||||| | || | | | ||||||||||||||||||||
Sbjct 652 AATTGCAGTTTGGGATCAGTTAGTGCTGATTCGTGTGAGAATTCATTGCGGTTAAATGGA 711
Query 1035 GATTCTGATTGTGTACTGAGAGAGAGTGTAGTGAATGAGGAAGTGGAAGTGTGTACTATT 1094
||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 712 GATACTGACTGTGTACTGAGCGAGAGTGTAGTGAATGAGGAAGTGGAAGTGTGTACTATT 771
Query 1095 AAGAATCTTGATAATGGGAAAGAGTTTGTGGTGAATGAGATTCAAGAAGATGGTACATGG 1154
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 772 AAGAATCTTGATAATGGGAAAGAGTTTGTGGTGAATGAGATTCAAGAAGACGGTACATGG 831
Query 1155 AAGAAGGTGAAGGAAGTGGGAACTGGAACACAGATGACGATGGAGGAGTTTGAGATGTGT 1214
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 832 AAGAAGGTGAAGGAAGTGGGAACTGGAACGCAGATGACGATGGAGGAGTTTGAGATGTGT 891
Query 1215 GTTGGACATTCTCCCATTGTTCAGGAGCTTATGAGAAGACAGAACGTTGAGGATTCTGAT 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 892 GTTGGACATTCTCCCATTGTTCAGGAGCTTATGAGAAGACAGAACGTTGAGGATTCTGAT 951
Query 1275 AAGAACACGTCTAAGGAAAACGAAGACAGTGGGAATAGTAATAAGGATAATGCATCCAAG 1334
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 952 AAGAACACGTCTAAGGAAAACGAAGACAGTGGGAATAGTAATAAGGATAATGCATCGAAG 1011
Query 1335 TCTAAGAAGAAAGGAAGTTGGTTTAAGAGTATTAAGAGTGTTGCAAGTAGCATGACTGGT 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 TCTAAGAAGAAAGGAAGTTGGTTTAAGAGTATTAAGAGTGTTGCAAGTAGCATGACTGGT 1071
Query 1395 CATAGCAAAGAGAGACGAAGCAGCGATGATAGAGATACATCGTCAGAGAGAGGTGGTCGG 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1072 CATAGCAAAGAGAGACGAAGCAGCGATGATAGAGATACATCGTCAGAGAGAGGTGGTCGG 1131
Query 1455 AGGTCGAGCTCTGCTACTGATGATTCTCAGGAATCTTCTTTTCATGGGCCGGAAAGAGTT 1514
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1132 AGGTCGAGCTCTGCTACTGATGATTCTCAGGAATCTTCTTTTCACGGGCCGGAAAGAGTT 1191
Query 1515 AGGGTTAGACAGTATGGGAAATCATCTAAAGAGCTCACGGCATTGTACAAAACGCAGGAG 1574
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1192 AGGGTTAGACAGTATGGGAAATCATCTAAAGAGCTCACGGCATTGTACAAGACGCAGGAG 1251
Query 1575 ATTCAAGCGCATAATGGTTCTATTTGGAGCATTAAGTTTAGTTTGGATGGTAAATATCTT 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 ATTCAAGCGCATAATGGTTCTATTTGGAGCATTAAGTTTAGTTTGGATGGTAAATATCTT 1311
Query 1635 GCTAGTGCTGGTGAGGATTGCATCATTCACATCTGGCAAGTCGTTGAGGCTGAGAAGAAG 1694
|||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||
Sbjct 1312 GCTAGTGCTGGTGAGGATTGCATCGTTCATATCTGGCAAGTCGTCGAGGCTGAGAAGAAG 1371
Query 1695 GGTGAGTTGTTACTTGATAGACCGGAACTGTTGCTTTTGGCTACTAATGGGTCTCCAGAA 1754
|| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1372 GGAGAGTTGCTACTTGATAGACCGGAACTGTTGCTTTTGGCTAATAATGGGTCTCCAGAA 1431
Query 1755 CCGACTACTATGTCACCAAGGAGAAGAGGGAGAACTTCTATAAGTAGAAAGTCATTGAGT 1814
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 CCAACTACTATGTCACCAAGGAGAAGAGGGAGAACTTCTATAAGTAGAAAGTCATTGAGT 1491
Query 1815 TTAGAGAACATATTTGTTCCAGATTCTCTTTTCGGGCTTTCGGAAAAGCCCTTTTGTTCC 1874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492 TTAGAGAACATATTTGTTCCAGATTCTCTTTTCGGGCTTTCGGAAAAGCCCTTTTGTTCC 1551
Query 1875 TTTCAGGGACATGTGGATGATGTACTTGACCTTGCTTGGTCCAAGTCTCAGCATTTGCTC 1934
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1552 TTTCAGGGACATGTGGATGATGTACTTGACCTTGCTTGGTCCAAGTCTCAGTATTTGCTT 1611
Query 1935 TCTTCATCAATGGATAAAACAGTTCGTTTGTGGAATTTGTCCAGCCAGACTTGCTTGAAA 1994
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1612 TCTTCATCAATGGATAAAACAGTTCGTTTGTGGAACTTGTCCAGCCAGACTTGCTTGAAA 1671
Query 1995 GTATTTTCGCACAGTGATTACGTGACTTGCATTCAATTTAATCCGGTTGATGATAGATAC 2054
||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||
Sbjct 1672 GTATTTTCGCACAGTGATTACGTGACTAGCATCCAATTTAATCCGGTCGATGATAGATAC 1731
Query 2055 TTCATCAGTGGATCCTTAGATGCAAAAGTTCGCGTCTGGAGCATTCCAGATCGTCAAGTA 2114
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1732 TTTATCAGCGGATCCTTAGATGCAAAAGTTCGCGTCTGGAGCATTCCAGATCGTCAAGTA 1791
Query 2115 GTTGACTGGTATGATCTTCATGAGATGGTCACTTCTGCTTGCTACACTCCAGATGGTCAG 2174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1792 GTTGACTGGTATGATCTTCATGAGATGGTCACTTCTGCTTGCTACACTCCAGATGGTCAG 1851
Query 2175 GGTGTGTTGGTTGGTTCATACAAAGGTAGCTGTCGGATGTACAGTGCATCAGATAACAAG 2234
|||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 1852 GGTGCGTTGGTTGGTTCATACAAAGGTAGCTGTCGCATGTATAGTGCATCAGATAACAAG 1911
Query 2235 CTGCAACAGAAAAGCCAGATAAATTTACAGAACAAGAAGAAGAAAGCTCATCaaaaaaaG 2294
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1912 CTGCAACAGAAAAGCCTGATAAATTTACAGAACAAGAAGAAGAAAGCTCATCAAAAAAAG 1971
Query 2295 ATAACTGGTTTCCAGTTTGTTCCTGGGAGCTCATCTGAAGTGCTTGTCACATCTTCCGAT 2354
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1972 ATAACTGGTTTCCAGTTTGTGCCTGGGAGCTCATCTGAAGTGCTTGTCACATCTTCCGAT 2031
Query 2355 TCAAGGATCCGTGTTGTTGATGGAACTGATCTAGTTAACAAACTTAAAGGGTTTCGAAAT 2414
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2032 TCAAGGATCCGTGTTGTTGATGGAACTGATCTAGTTAACAAACTTAAAGGGTTTCGGAAT 2091
Query 2415 ACGAGCAGCCAGATCTCTGCCTCAATCACAGCAGATGGGAAATACGTAGTTTCAGCAAGC 2474
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2092 ACGAGCAGCCAGATATCTGCCTCAATCACAGCAGATGGGAAATACGTAGTTTCAGCGAGC 2151
Query 2475 GAGGATTCACACGTGTACATATGGAAGTACGAATCCCCTGCTTCTCGACCAAGCAGAAGT 2534
|||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2152 GAGGATTCGCATGTGTACATATGGAAATACGAATCCCCTGCTTCTCGACCAAGCAGAAGT 2211
Query 2535 AACAACAACAAGAACGTGACAGTCACAAACTCTTACGAGCATTTCCATAGCCAAGACGTC 2594
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2212 AACAACAACAAGAACGTGACGGTCACAAACTCTTACGAGCATTTCCATAGCCAAGACGTC 2271
Query 2595 TCTGCAGCCATCTCATGGCCTGGAATGGCCTCAACAGAAAACTGGGGAACCCAAAACAGA 2654
|||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct 2272 TCTGCAGCCATCTCATGGCCCGGAATGGCTTCAACAGAAAACTGGGGAACTCAAAACAGA 2331
Query 2655 GCGGGGTTTAACGGAAGCACCAATAACTTGGACAATATCTCCACAGCTAACCATCCGCCT 2714
|| ||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 2332 GCCGGGTTTAACGGAAACACCAATAATTTGGACAATGTCTCCACAGCTAACCATCCGCCT 2391
Query 2715 ACACCGGTAGACCAGCT-GGGGACTGTGGAGCGATTAAACAGTCCACGGAATGGGATCAT 2773
||||| |||||||||| |||| | ||||| ||||||||||||||| |||| ||||||||
Sbjct 2392 ACACCCGTAGACCAGCCAGGGG-CAGTGGACCGATTAAACAGTCCAAGGAACGGGATCAT 2450
Query 2774 ATCGAGCGCAACAAACGGATACTTTTTCGATAGAATGTCAGCGACTTGGCCTGAAGAGAA 2833
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2451 ATCGAGCGCAACAAACGGATACTTTTTCGATAGAATATCAGCGACTTGGCCTGAAGAGAA 2510
Query 2834 ACTGTTGTTTGCAAGGAACAGAAGTGGGAATCGTCTGAGTACGGATATGTCGTCGTCAAA 2893
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2511 ACTGTTGTTTGGAAGGAACAGAAGTGGGAATCGTCTGAGTACTGATATGTCGTCGTCAAA 2570
Query 2894 TGGAAACTCAGGGAATGTATCGGCTTCTTGGGGAATGGTGATTGTCACTGCAGGTCTCAG 2953
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct 2571 TGGAAACTCAGGGAATGTATCAGCTTCTTGGGGAATGGTGATAGTCACTGCAGGTCTGAG 2630
Query 2954 AGGAGAGATACGAACGTTTCAGAACTTTGGTTTGCCCATTCGGATTTGATAAAAACTGTA 3013
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2631 AGGAGAGATACGAACGTTTCAGAACTTTGGTTTGCCCATTCGGATTTGATAAAAAGTGTA 2690
Query 3014 CAGAGTG 3020
|||||||
Sbjct 2691 CAGAGTG 2697
> Ahg359594 jgi|Araly1|359594|fgenesh1_pg.C_scaffold_450000001
Length=1552
Score = 1803 bits (976), Expect = 0.0
Identities = 1018/1039 (98%), Gaps = 0/1039 (0%)
Strand=Plus/Plus
Query 1188 ATGACGATGGAGGAGTTTGAGATGTGTGTTGGACATTCTCCCATTGTTCAGGAGCTTATG 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 ATGACGATGGAGGAGTTTGAGATGTGTGTTGGACATTCTCCCATTGTTCAGGAGCTTATG 573
Query 1248 AGAAGACAGAACGTTGAGGATTCTGATAAGAACACGTCTAAGGAAAACGAAGACAGTGGG 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 AGAAGACAGAACGTTGAGGATTCTGATAAGAACACGTCTAAGGAAAACGAAGACAGTGGG 633
Query 1308 AATAGTAATAAGGATAATGCATCCAAGTCTAAGAAGAAAGGAAGTTGGTTTAAGAGTATT 1367
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 634 AATAGTAATAAGGATAATGCATCGAAGTCTAAGAAGAAAGGAAGTTGGTTTAAGAGTATT 693
Query 1368 AAGAGTGTTGCAAGTAGCATGACTGGTCATAGCAAAGAGAGACGAAGCAGCGATGATAGA 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 694 AAGAGTGTTGCAAGTAGCATGACTGGTCATAGCAAAGAGAGACGAAGCAGCGATGATAGA 753
Query 1428 GATACATCGTCAGAGAGAGGTGGTCGGAGGTCGAGCTCTGCTACTGATGATTCTCAGGAA 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 GATACATCGTCAGAGAGAGGTGGTCGGAGGTCGAGCTCTGCTACTGATGATTCTCAGGAA 813
Query 1488 TCTTCTTTTCATGGGCCGGAAAGAGTTAGGGTTAGACAGTATGGGAAATCATCTAAAGAG 1547
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 TCTTCTTTTCACGGGCCGGAAAGAGTTAGGGTTAGACAGTATGGGAAATCATCTAAAGAG 873
Query 1548 CTCACGGCATTGTACAAAACGCAGGAGATTCAAGCGCATAATGGTTCTATTTGGAGCATT 1607
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 874 CTCACGGCATTGTACAAGACGCAGGAGATTCAAGCGCATAATGGTTCTATTTGGAGCATT 933
Query 1608 AAGTTTAGTTTGGATGGTAAATATCTTGCTAGTGCTGGTGAGGATTGCATCATTCACATC 1667
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 934 AAGTTTAGTTTGGATGGTAAATATCTTGCTAGTGCTGGTGAGGATTGCATCGTTCATATC 993
Query 1668 TGGCAAGTCGTTGAGGCTGAGAAGAAGGGTGAGTTGTTACTTGATAGACCGGAACTGTTG 1727
||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 994 TGGCAAGTCGTCGAGGCTGAGAAGAAGGGAGAGTTGCTACTTGATAGACCGGAACTGTTG 1053
Query 1728 CTTTTGGCTACTAATGGGTCTCCAGAACCGACTACTATGTCACCAAGGAGAAGAGGGAGA 1787
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1054 CTTTTGGCTAATAATGGGTCTCCAGAACCAACTACTATGTCACCAAGGAGAAGAGGGAGA 1113
Query 1788 ACTTCTATAAGTAGAAAGTCATTGAGTTTAGAGAACATATTTGTTCCAGATTCTCTTTTC 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1114 ACTTCTATAAGTAGAAAGTCATTGAGTTTAGAGAACATATTTGTTCCAGATTCTCTTTTC 1173
Query 1848 GGGCTTTCGGAAAAGCCCTTTTGTTCCTTTCAGGGACATGTGGATGATGTACTTGACCTT 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 GGGCTTTCGGAAAAGCCCTTTTGTTCCTTTCAGGGACATGTGGATGATGTACTTGACCTT 1233
Query 1908 GCTTGGTCCAAGTCTCAGCATTTGCTCTCTTCATCAATGGATAAAACAGTTCGTTTGTGG 1967
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 1234 GCTTGGTCCAAGTCTCAGTATTTGCTTTCTTCATCAATGGATAAAACAGTTCGTTTGTGG 1293
Query 1968 AATTTGTCCAGCCAGACTTGCTTGAAAGTATTTTCGCACAGTGATTACGTGACTTGCATT 2027
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1294 AACTTGTCCAGCCAGACTTGCTTGAAAGTATTTTCGCACAGTGATTACGTGACTAGCATC 1353
Query 2028 CAATTTAATCCGGTTGATGATAGATACTTCATCAGTGGATCCTTAGATGCAAAAGTTCGC 2087
|||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1354 CAATTTAATCCGGTCGATGATAGATACTTTATCAGCGGATCCTTAGATGCAAAAGTTCGC 1413
Query 2088 GTCTGGAGCATTCCAGATCGTCAAGTAGTTGACTGGTATGATCTTCATGAGATGGTCACT 2147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414 GTCTGGAGCATTCCAGATCGTCAAGTAGTTGACTGGTATGATCTTCATGAGATGGTCACT 1473
Query 2148 TCTGCTTGCTACACTCCAGATGGTCAGGGTGTGTTGGTTGGTTCATACAAAGGTAGCTGT 2207
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1474 TCTGCTTGCTACACTCCAGATGGTCAGGGTGCGTTGGTTGGTTCATACAAAGGTAGCTGT 1533
Query 2208 CGGATGTACAGTGCATCAG 2226
|| ||||| ||||||||||
Sbjct 1534 CGCATGTATAGTGCATCAG 1552
Score = 695 bits (376), Expect = 0.0
Identities = 472/516 (91%), Gaps = 15/516 (3%)
Strand=Plus/Plus
Query 579 ATGGGAGCTTCGAAGTTCGACGTTTGGACCTCTGAACCTGCTTCTGTCTCTGAGAGGCGT 638
|||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 1 ATGGGAGCCTCGAAGTTCGACGTTTGGATCTCTGAACCTGCTTCTGTCTCCGAGAGACGT 60
Query 639 TCCAAGCTTTTAAACGAAATGGGTCTTAGCCGTGACCCGGTTCTCTCCCGGTTAAAACCC 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCCAAGCTTTTAAACGAAATGGGTCTTAGCCGTGACCCGGTTCTCTCCCGGTTAAAACCC 120
Query 699 GTTTCAGATTCTTCCAGCTCCAAAGATACCGGAGCCGCCGGCTTCGAGATTTCTCGATCG 758
||||| ||||| | |||| |||||| |||||||||| | ||| ||| ||||| ||||||
Sbjct 121 GTTTCGGATTC--C-AGCTTCAAAGAAACCGGAGCCGGCAGCTCCGACATTTCCCGATCG 177
Query 759 ATCTCGTGTAATCAATTGGCTCGGCGAGATCATGGAGAGTGTTCTGAAAGTGTCGGCGGT 818
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 178 ATCTCGTGTAATCAATTGGCTCGGCGAGATCATGGAGAGTGTTTTGAAACTGTCGGCGGT 237
Query 819 TGTGCTTCTTGTATCGTGAGATCGAAATCCGACATTACCACTAGCCAATGTGGTGATCGT 878
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 TGTGCTTCTTGCATCGTGAGATCGAAATCCGACATTACCACTAGCCAATGTGGTGATCGT 297
Query 879 GACCGTCGATATACGTCTCCTGGTAATCCTTGTTCTTGTTCCGTCTCTAAACTCTCTGTT 938
|| |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||
Sbjct 298 GAACGTCGATATACGTCTCTTGGTAATTCTTGTTCTTGTTCAGTCTCTAAACTCTCTGTT 357
Query 939 CATCATTCTTCACATTCAGAGATCAGTAGAACCAGCTCGCCATTTGTGAATTGCAGTGTA 998
| |||| ||||||||||||||||||||||||||||| | |||||||| ||||||||| |
Sbjct 358 CGTCATCCTTCACATTCAGAGATCAGTAGAACCAGCCCACCATTTGTCAATTGCAGTTTG 417
Query 999 GGATCAGTTAGTGCTGATTC-----A---TT----GCGGTTAAATGGAGATTCTGATTGT 1046
|||||||||||||||||||| | || |||||||||||||||| |||| |||
Sbjct 418 GGATCAGTTAGTGCTGATTCGTGTGAGAATTCATTGCGGTTAAATGGAGATACTGACTGT 477
Query 1047 GTACTGAGAGAGAGTGTAGTGAATGAGGAAGTGGAA 1082
|||||||| |||||||||||||||||||||||||||
Sbjct 478 GTACTGAGCGAGAGTGTAGTGAATGAGGAAGTGGAA 513
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127226466539
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5