BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G16410.1
Length=2106
Score E
Sequences producing significant alignments: (Bits) Value
Ahg929465 jgi|Araly1|929465|scaffold_301922.1 2001 0.0
Ahg479094 jgi|Araly1|479094|fgenesh2_kg.3__1795__AT3G16410.1 1550 0.0
Ahg497400 jgi|Araly1|497400|fgenesh2_kg.348__1__AT2G33070.1 1546 0.0
Ahg482246 jgi|Araly1|482246|fgenesh2_kg.4__1306__AT2G33070.1 1546 0.0
Ahg929469 jgi|Araly1|929469|scaffold_301926.1 525 5e-148
Ahg930637 jgi|Araly1|930637|scaffold_303094.1 339 7e-92
> Ahg929465 jgi|Araly1|929465|scaffold_301922.1
Length=1450
Score = 2001 bits (1083), Expect = 0.0
Identities = 1317/1430 (92%), Gaps = 15/1430 (1%)
Strand=Plus/Plus
Query 515 GCCAAAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATATGGGATGATGGTGTTTAC 574
||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 24 GCCAAAAAGCTAGAAGCAAAGGGTGGTGAGACGGGAGATGTATGGGATGATGGTGTTTAC 83
Query 575 GATAATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGCCTTCGTCAAGTTT 634
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 84 GAAAATGTTAGAAAGGTATATGTAGGGCAAGGCCAATATGGTATAGCCTTCGTCAAGTTT 143
Query 635 GAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAGAGCTA 694
||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||
Sbjct 144 GAGTATGTCAATGGTTCTCAAGTAGTTGTTGGAGATGAACATGGAACGAAGACAAAGCTA 203
Query 695 GGAGTTGAAGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGATACCGT 754
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 204 GGAGTTGATGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGT 263
Query 755 GAGAAAGTTAATGGTATGACCTCAGAGATGATCACTTTTCTTTCATTCAAGACTTATAAA 814
||||||||||| | |||||||||||| |||||||| ||||||||||||||||||| || |
Sbjct 264 GAGAAAGTTAACGATATGACCTCAGAAATGATCACGTTTCTTTCATTCAAGACTTTTACA 323
Query 815 GGCAAAACCTCTCAGCCTATCGAACA-AAGACCTGGTATTAAGTTTGTGCTACAAGGTGG 873
|||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||
Sbjct 324 GGCAAAACCTCTCATCCTATCGAA-AGAAGACCTGGGGTTAAGTTTGTGCTACAAGGTGG 382
Query 874 AAAAATTGTTGGGTTTCACGGACGTTCGACCGACGTTCTAGACTCCCTCGGGGCTTATAT 933
|||| | |||||||||||||||||||| |||||||||||| ||||||||||||| || |
Sbjct 383 AAAAGTCGTTGGGTTTCACGGACGTTCCACCGACGTTCTACACTCCCTCGGGGCCTACGT 442
Query 934 TTCATTGTCGCCCACT-CCAAACTTGCATGGAAAGTGGACAAAGGTGGATG-AAAATGGA 991
||| ||| || ||||| ||||| |||| ||||||||||| |||||||| | |||| |||
Sbjct 443 TTCTTTGCCGTCCACTCCCAAA-TTGCTTGGAAAGTGGATTAAGGTGGA-GCAAAAAGGA 500
Query 992 GATGGTCCAGGGCTAAGATGCTCGCATGACATAGCACAGGTAGGAAACAAGATTTACTCT 1051
|| |||||||||||||||||||| |||| ||||||||| |||| ||||||||||||||
Sbjct 501 GAAGGTCCAGGGCTAAGATGCTCACATGGCATAGCACAAATAGGTAACAAGATTTACTCC 560
Query 1052 TTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCTTTGACATC 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 561 TTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCTTTGACCTC 620
Query 1112 GAGAGCCGGACTTGGTCCATTTCTCCAGCCACGGGAGACATTCCA-ACCCTCTCTTGCCT 1170
|||| ||||||||||||||||||||||||||| |||||| ||||| ||| |||||||| |
Sbjct 621 GAGACCCGGACTTGGTCCATTTCTCCAGCCACCGGAGACGTTCCACACC-TCTCTTGCTT 679
Query 1171 AGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTGGAGGCCGAGACGCTTC 1230
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 680 AGGTGTCCGTATGGTGTCAATAGGGTCGACCCTCTATGTCTTTGGAGGCCGAGACGCTTC 739
Query 1231 ACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACAAACGAGTGGAAACTGCTAAC 1290
||| || ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 740 ACGCCAGTACAATGGTTTCTACTCATTTGACACAACCACAAACGAGTGGAAACTGCTAAC 799
Query 1291 TCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGGCAGCCGATGAGGAAAA 1350
|||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 800 TCCGGTAGAAGAAGGACCAACTCCTCGTAGTTTCCACTCGATGGCAGCCGATGAGGAAAA 859
Query 1351 CGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATACACTAGACTCTTACAA 1410
|||||||||||||||||||||| |||||| || |||| |||| |||||||||||||||||
Sbjct 860 CGTTTACGTTTTCGGTGGAGTGGGTGCTAGGGAACGAATCAAGACACTAGACTCTTACAA 919
Query 1411 CATCGTTGATAAGAAGTGGTTTCATTGTTCGACTCCAGGAGATTCCCTTACCGCAAGAGG 1470
|||||||||||||||||||||||| || |||||||||||||||||| ||| | ||||||
Sbjct 920 CATCGTTGATAAGAAGTGGTTTCAGTGCTCGACTCCAGGAGATTCCTTTAGCATAAGAGG 979
Query 1471 AGGAGCAGGGCTCGAAGTGGTGCAAGGGAAGGTATGGGTTGTGTATGGGTTTAACGGATG 1530
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 980 AGGAGCAGGGCTCGAAGTGGTGCAAGGGAAAGTATGGGTTGTGTATGGATTTAACGGATG 1039
Query 1531 TGAAGTAGATGATGTTCATTACTACGATCCTGTTCAAGACAAGT-GGACACAAGTGGAAA 1589
|||| ||||||||||||||| ||||||||||| | |||||| || |||||| ||||||||
Sbjct 1040 TGAAATAGATGATGTTCATTTCTACGATCCTGCTGAAGACA-GTTGGACACGAGTGGAAA 1098
Query 1590 CATTCGGTGTGAGGCCTTCCGAAAGAAGTGTATTCGCTAGTGCGGCTCTTGGGAAACACA 1649
|||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1099 CATTTGGTGTGAGACCTTCCGAAAGGAGTGTATTCGCTAGTGCGGCTGTTGGGAAACACA 1158
Query 1650 TTGTGATTTTTGGAGGTGAAATTGCGATGGACCCGCTAGCTCACGTGGGTCCAGGTCAAT 1709
||||||| || |||||||| |||||||||||||| ||||||||||| ||||| |||||||
Sbjct 1159 TTGTGATGTTCGGAGGTGAGATTGCGATGGACCCACTAGCTCACGTAGGTCCGGGTCAAT 1218
Query 1710 TGACCGATGGAACTTTTGCATTGGACACAGAGACGTTGCAATGGGAGAGGCTGGATAAGT 1769
||| |||||| ||||| | ||||| |||||||||||||||||||||||| | |||||||
Sbjct 1219 TGATCGATGGGACTTTCACGTTGGATACAGAGACGTTGCAATGGGAGAGGTTAGATAAGT 1278
Query 1770 TTGGTGGAGAGGAAGAGACTCCGAGTAGCAGAGGATGGACCGCGTCCACAACTGCGACCA 1829
|| ||| |||||| || || | |||||||||||||||||||||||||||||||| |||||
Sbjct 1279 TTAGTGAAGAGGA-GACAC-C-GAGTAGCAGAGGATGGACCGCGTCCACAACTGGGACCA 1335
Query 1830 TTGGTGGCAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAACCAATGACCGGTTTG 1889
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1336 TTGATGGTAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAACCAATGACCGGTTTG 1395
Query 1890 ATGATCTCTTCTTTTACGGAATTGACTCTGCCTAATTAAG-GCAGATTTG 1938
|||| ||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct 1396 ATGACCTCTTCTTTTACGGAATCGACTCTGCCTAATTAAGCGC-GATTTG 1444
> Ahg479094 jgi|Araly1|479094|fgenesh2_kg.3__1795__AT3G16410.1
Length=1634
Score = 1550 bits (839), Expect = 0.0
Identities = 1038/1132 (92%), Gaps = 22/1132 (2%)
Strand=Plus/Plus
Query 977 GTGGATG-AAAATGGAGATGGTCCAGGGCTAAGATGCTCGCATGACATAGCACAGGTAGG 1035
||||| | |||| ||||| |||||||||||||||||||| |||| |||||||||||||||
Sbjct 516 GTGGA-GCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCATAGCACAGGTAGG 574
Query 1036 AAACAAGATTTACTCTTTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCT 1095
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 575 TAACAAGATTTACTCCTTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCT 634
Query 1096 TTACGTCTTTGACATCGAGAGCCGGACTTGGTCCATTTCTCCAGCCACGGGAGACATTCC 1155
||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||| ||||
Sbjct 635 TTACGTCTTTGACCTCGAGACCCGGACTTGGTCCATCTCTCCAGCCACCGGAGACGTTCC 694
Query 1156 AAC-CCTCTCTTGCCTAGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTG 1214
|| |||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||
Sbjct 695 -ACACCTCTCTTGCTTAGGTGTCCGTATGGTGTCAGTAGGATCGACCCTCTACGTCTTTG 753
Query 1215 GAGGCCGAGACGCTTCACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACAAACG 1274
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||
Sbjct 754 GAGGCCGAGACGCTTCACGCCAATACAACGGTTTCTACTCATTTGACACGACCACACACG 813
Query 1275 AGTGGAAACTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGG 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 814 AGTGGAAACTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCGATGG 873
Query 1335 CAGCCGATGAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATA 1394
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
Sbjct 874 CAGCCGATGAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCAAGGCTCAAGA 933
Query 1395 CACTAGACTCTTACAACATCGTTGATAAGAAGTGGTTTCATTGTTCGACTCCAGGAGATT 1454
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||| |
Sbjct 934 CACTAGACTCTTACAACATCGTTGATAAGAAGTGGTTTCAGTGCTCGACTCCCTTAGAGT 993
Query 1455 CCCTTACCGCAAGAGGAGGAGCAGGGCTCGAAGTGGTGCAAGGGAAGGTATGGGTTGTGT 1514
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 994 CCCTTACCGCAAGAGGAGGAGCAGGGCTCGAAGTGGTGAAAGGGAAGGTATGGGTTGTGT 1053
Query 1515 ATGGGTTTAACGGATGTGAAGTAGATGATGTTCATTACTACGATCCTGTTCAAGACAAGT 1574
|||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1054 ATGGATTTAACGGATGTGAAGTAGATGATGTTTATTACTACGATCCTGTTGAAGACAAGT 1113
Query 1575 GGACACAAGTGGAAACATTCGGTGTGAGGCCTTCCGAAAGAAGTGTATTCGCTAGTGCGG 1634
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1114 GGACACAAGTGGAAACATTCGGTGTGAGACCTTCCGAAAGGAGTGTATTCGCTAGTGCGG 1173
Query 1635 CTCTTGGGAAACACATTGTGATTTTTGGAGGTGAAATTGCGATGGACCCGCTAGCTCACG 1694
|| ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 1174 CTGTTGGGAAACACATTGTGATGTTTGGAGGTGAGATTGCGATGGACCCACTAGCTCACG 1233
Query 1695 TGGGTCCAGGTCAATTGACCGATGGAACTTTTGCATTGGACACAGAGACGTTGCAATGGG 1754
|||||| ||||||||||||||||| |||||||| || || || ||||||||||||||||
Sbjct 1234 CGGGTCCGGGTCAATTGACCGATGGGACTTTTGCGTTAGATACGGAGACGTTGCAATGGG 1293
Query 1755 AGAGGCTGGATAAGTTTGGTGGAGAGGAAGAGACTCCGAGTAGCAGAGGATGGACCGCGT 1814
||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||
Sbjct 1294 AGAGGCTGGATAAGTTTAGTGAAGAGGAGGAGACTCCGAGTAGCAGAGGATGGACCGCGT 1353
Query 1815 CCACAACTGCGACCATTGGTGGCAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAA 1874
|||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct 1354 CCACGACTGGGACCATTGATGGTAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAA 1413
Query 1875 CCAATGACCGGTTTGATGATCTCTTCTTTTACGGAATTGACTCTGCCT-AATTAAGGCAG 1933
||||||||||||||||||||||||||||||||||||| |||||| || |||| | | |
Sbjct 1414 CCAATGACCGGTTTGATGATCTCTTCTTTTACGGAATCCACTCTGTCTGAATTCTG-C-G 1471
Query 1934 ATTTGGTGAT-GAACGT-T-TGTGATGCAATAAGGGAAGGGTCTTGATACCACCATATTA 1990
|||| || | | || | ||||||||||||||| | ||||| |||||||||||||| |
Sbjct 1472 -TTTG-TGTTTGTGTGTGTGTGTGATGCAATAAGGCAGGGGTCGTGATACCACCATATGA 1529
Query 1991 TCATTCGTCAGCTTG-TCCATTT-TGTTGATGttttttttttCCTAAACGTTTTCTATAT 2048
|| ||| |||||||| || |||| | ||||| |||||||||| ||||||||| |||||||
Sbjct 1530 TCCTTC-TCAGCTTGCTC-ATTTATTTTGATTTTTTTTTTTTTCTAAACGTTGTCTATAT 1587
Query 2049 GTTTAATTGTTTTATGTTTCGTGGTT-TATCCAATAAATTGTTTATTTTCTT 2099
|||| |||| | |||||||| || |||||||||||||||||||||||||
Sbjct 1588 GTTT----GTTTCACGTTTCGTG-TTGTATCCAATAAATTGTTTATTTTCTT 1634
Score = 608 bits (329), Expect = 5e-173
Identities = 412/451 (91%), Gaps = 10/451 (2%)
Strand=Plus/Plus
Query 519 AAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATATGGGATGATGGTGTTTACGATA 578
||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||| |
Sbjct 28 AAAAGCTAGAAGCAAAGGGTGGTGAGACAGGAGATGTATGGGATGATGGTGCTTACGAAA 87
Query 579 ATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGCCTTCGTCAAGTTTGAGT 638
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 88 ATGTTAGAAAGGTATATGTAGGGCAAGGCCAATATGGTATAGCCTTCGTCAAGTTTGAGT 147
Query 639 ATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAGAGCTAGGAG 698
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 148 ATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAAAAGACAGAGCTAGGAG 207
Query 699 TTGAAGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGATACCGTGAGA 758
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 208 TTGAGGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGA 267
Query 759 AAGTTAATGGTATGACCTCAGAGATGATCACTTTTCTTTC-ATTCAAGACTTATAAAGGC 817
||||||| | |||||||||||| |||||||| |||||||| || |||||||| |||||||
Sbjct 268 AAGTTAACGATATGACCTCAGAAATGATCACGTTTCTTTCTAT-CAAGACTTTTAAAGGC 326
Query 818 AAAACCTCTCAGCCTATCGAACA-AAGACCTGGTATTAAGTTTGTGCTACAAGGTGGAAA 876
||||||||||| ||||||||| | ||||||||| |||||||||||||||| ||||||||
Sbjct 327 AAAACCTCTCATCCTATCGAA-AGAAGACCTGGGGTTAAGTTTGTGCTACACGGTGGAAA 385
Query 877 AATTGTTGGGTTTCACGGACGTTCGACCGACGTTCTAGACTCCCTCGGGGCTTATATTTC 936
||| |||||||||||||||||||| |||| | ||| ||||||||||||| || ||||
Sbjct 386 AATCGTTGGGTTTCACGGACGTTCCACCG---T-CTACACTCCCTCGGGGCCTACGTTTC 441
Query 937 ATTGTCGCCCACTCC-AAACTTGCATGGAAA 966
||| || ||||||| ||| || | ||||||
Sbjct 442 TTTGCCGTCCACTCCCAAA-TTACTTGGAAA 471
> Ahg497400 jgi|Araly1|497400|fgenesh2_kg.348__1__AT2G33070.1
Length=1563
Score = 1546 bits (837), Expect = 0.0
Identities = 1228/1419 (87%), Gaps = 18/1419 (1%)
Strand=Plus/Plus
Query 513 ATGCCA-AAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATATGGGATGATGGTGT- 570
||| || ||||| | ||||||||||||||||| | |||||| |||||||||||||| |
Sbjct 134 ATGGCACAAAAGGTGGAAGCAAAGGGTGGTGAGATAGGAGATGTATGGGATGATGGT-TC 192
Query 571 TTACGATAATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGCCTTCGTCAA 630
|||||| ||||||||| ||||| |||||||||| | || ||||||| |||||||||||
Sbjct 193 TTACGACGGTGTTAGAAAAGTATACGTAGGGCAAGGCGAAGATGGTATCGCCTTCGTCAA 252
Query 631 GTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAGA 690
|||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct 253 GTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGCGATGAACGTGGGAAGAAGACTTT 312
Query 691 GCTAGGAGTTGAAGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGATA 750
|||||||| ||| ||||||||| ||||||| ||||||||||| |||||||||||||| ||
Sbjct 313 GCTAGGAGCTGAGGAGTTTGAGGTTGATGCAGATGACTACATAGTATACGTGGAAGGTTA 372
Query 751 CCGTGAGAAAGTTAAT--GGTAT-GACCTCAGAGATGATCACTTTTCTTTCATTCAAGAC 807
| |||||||||| | ||| | || |||||| ||| | |||| | ||||||||
Sbjct 373 TCATGAGAAAGTTTTTGGGGTCTCAACAAAAGAGATCATCTCAACTCTTACGTTCAAGAC 432
Query 808 TTATAAAGGCAAAACCTCTCAGCC-TATCGAACAAAGAC-CTGGTATTAAGTTTGTGCTA 865
||||||||||||||| |||| ||| | | | | | | | | || | |||||||| ||
Sbjct 433 TTATAAAGGCAAAACTTCTCCGCCGT-TTGGA-ATCGTCTCCGGGACCAAGTTTGTCCTC 490
Query 866 CAAGGTGGAAAAATTGTTGGGTTTCACGGACGTTCGACCGACGTTCTAG-ACTCCCTCGG 924
|||||||| ||||| |||||||||||||||||||| || || ||| | | |||| || ||
Sbjct 491 CAAGGTGGCAAAATCGTTGGGTTTCACGGACGTTCCACTGATGTT-TTGCACTCACTTGG 549
Query 925 GGCTTATATTTCATTGTCGCCCACTCCAAACTTGCATGGAAAGTGGACAAAGGTGGATG- 983
|| |||||||| ||| || |||||||||| |||| ||||||||||| ||||||||| |
Sbjct 550 AGCCTATATTTCTTTGCCGTCCACTCCAAAATTGCGTGGAAAGTGGATAAAGGTGGA-GC 608
Query 984 AAAATGGAGATGGTCCAGGGCTAAGATGCTCGCATGACATAGCACAGGTAGGAAACAAGA 1043
|||| ||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||
Sbjct 609 AAAAAGGAGAGGGTCCAGGGCCAAGATGCTCACATGACATAGCACAAGTAGGAAACAAGA 668
Query 1044 TTTACTCTTTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCT 1103
||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 669 TTTACTCCTTTGGTGGTGAGCTCACACCAAATCAGCCCATCGACAAACACCTTTATGTCT 728
Query 1104 TTGACATCGAGAGCCGGACTTGGTCCATTTCTCCAGCCACGGGAGACATTCCAACCCTCT 1163
| ||| |||||| ||||||||||||||||||||||||||| |||||| |||||| |||||
Sbjct 729 TCGACCTCGAGACCCGGACTTGGTCCATTTCTCCAGCCACCGGAGACGTTCCAAACCTCT 788
Query 1164 CTTGCCTAGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTGGAGGCCGAG 1223
||||| |||| ||| ||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct 789 CTTGCTTAGGCGTCCGTATGGTGTCAATTGGATCAAGCCTCTATGTCTTTGGAGGCCGAG 848
Query 1224 ACGCTTCACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACA-AACGAGTGGAAA 1282
|||||||||| |||||||||| |||||||||||||| |||| || | ||||||||||||
Sbjct 849 ACGCTTCACGAAAATACAACGGCTTCTACTCGTTTGATACGATCA-AGAACGAGTGGAAA 907
Query 1283 CTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGGCAGCCGAT 1342
|||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||
Sbjct 908 CTGCTAACTCCGGTCGAACAAGGACCCACTCCTCGTAGCTTCCACTCGATGGCAGCCGAT 967
Query 1343 GAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATACACTAGAC 1402
||| |||||||||||||||||||||||||||| ||||||| || ||||| |||||||||
Sbjct 968 GAGAAAAACGTTTACGTTTTCGGTGGAGTGAGCGCTACGGTTCGGCTCAAGACACTAGAC 1027
Query 1403 TCTTACAACATCGTTGATAAGAAGTGGTTTCATTGTTCGACTCCAGGAGATTCCCTTACC 1462
||||||||||||||||| | |||||| |||| |||||||| || |||| |||| ||| |
Sbjct 1028 GCTTACAACATCGTTGATCACAAGTGGGTTCAGTGTTCGACCCCGGGAGGTTCCTTTAGC 1087
Query 1463 GCAAGAGGAGGAGCAGGGCTCGAAGTGGTGCAAGGGAAGGTATGGGTTGTGTATGGGTTT 1522
|||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1088 ATAAGAGGAGGAGCCGGGCTCGAAGTGGTACAAGGGAAGGTATGGGTTGTGTATGGATTC 1147
Query 1523 AACGGATGTGAAGTAGATGATGTTCATTACTACGATCCTGTTCAAGACAAGTGGACACAA 1582
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1148 AACGGATGTGAAGTTGATGATGTTCATTGCTACGATCCTGTTCAAGACAAGTGGACACAA 1207
Query 1583 GTGGAAACATTCGGTGTGAGGCCTTCCGAAAGAAGTGTATTCGCTAGTGCGGCTCTTGGG 1642
|||||||| ||||||| || ||||| | || ||||| ||||||||||||| | |||||
Sbjct 1208 GTGGAAACGTTCGGTGAGAAGCCTTGTGCGAGGAGTGTGTTCGCTAGTGCGGTTGTTGGG 1267
Query 1643 AAACACATTGTGATTTTTGGAGGTGAAATTGCGATGGACCCGCTAGCTCACGTGGGTCCA 1702
||| || || |||| ||||||||||| || ||||||||||| |||||||| ||||||
Sbjct 1268 AAATACCTTTTGATCTTTGGAGGTGAGATAGCGATGGACCCAAAAGCTCACGAGGGTCCG 1327
Query 1703 GGTCAATTGACCGATGGAACTTTTGCATTGGACACAGAGACGTTGCAA-TGGGAGAGGCT 1761
|||||||||| | ||| |||||||| || || |||||||||||| || ||||||| |||
Sbjct 1328 GGTCAATTGAGTGGTGGGACTTTTGCGTTTGATACAGAGACGTTG-AAGTGGGAGAAGCT 1386
Query 1762 GGATAAGTTTGGTGGAGAGGAAGAGACTCCGAGTAGCAGAGGATGGACCGCGTCCACAAC 1821
|||||||||||||| ||||||||||||||| |||| |||||||||| | |||||||| ||
Sbjct 1387 GGATAAGTTTGGTGAAGAGGAAGAGACTCCAAGTATCAGAGGATGGTCTGCGTCCACGAC 1446
Query 1822 TGCGACCATTGGTGGCAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAACCAATGA 1881
|| |||||||| ||| ||||||||||| ||||||| |||||| ||||||| ||| |||||
Sbjct 1447 TGGGACCATTGATGGTAAGAAAGGACTGGTGATGCTTGGTGGGAAAGCTCAAACTAATGA 1506
Query 1882 CCGGTTTGATGATCTCTTCTTTTACGGAATTGACTCTGC 1920
||||||| ||||||||||||||| ||| ||||||||||
Sbjct 1507 TCGGTTTGGTGATCTCTTCTTTTATGGAGTTGACTCTGC 1545
> Ahg482246 jgi|Araly1|482246|fgenesh2_kg.4__1306__AT2G33070.1
Length=1592
Score = 1546 bits (837), Expect = 0.0
Identities = 1228/1419 (87%), Gaps = 18/1419 (1%)
Strand=Plus/Plus
Query 513 ATGCCA-AAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATATGGGATGATGGTGT- 570
||| || ||||| | ||||||||||||||||| | |||||| |||||||||||||| |
Sbjct 134 ATGGCACAAAAGGTGGAAGCAAAGGGTGGTGAGATAGGAGATGTATGGGATGATGGT-TC 192
Query 571 TTACGATAATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGCCTTCGTCAA 630
|||||| ||||||||| ||||| |||||||||| | || ||||||| |||||||||||
Sbjct 193 TTACGACGGTGTTAGAAAAGTATACGTAGGGCAAGGCGAAGATGGTATCGCCTTCGTCAA 252
Query 631 GTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAGA 690
|||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct 253 GTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGCGATGAACGTGGGAAGAAGACTTT 312
Query 691 GCTAGGAGTTGAAGAGTTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGATA 750
|||||||| ||| ||||||||| ||||||| ||||||||||| |||||||||||||| ||
Sbjct 313 GCTAGGAGCTGAGGAGTTTGAGGTTGATGCAGATGACTACATAGTATACGTGGAAGGTTA 372
Query 751 CCGTGAGAAAGTTAAT--GGTAT-GACCTCAGAGATGATCACTTTTCTTTCATTCAAGAC 807
| |||||||||| | ||| | || |||||| ||| | |||| | ||||||||
Sbjct 373 TCATGAGAAAGTTTTTGGGGTCTCAACAAAAGAGATCATCTCAACTCTTACGTTCAAGAC 432
Query 808 TTATAAAGGCAAAACCTCTCAGCC-TATCGAACAAAGAC-CTGGTATTAAGTTTGTGCTA 865
||||||||||||||| |||| ||| | | | | | | | | || | |||||||| ||
Sbjct 433 TTATAAAGGCAAAACTTCTCCGCCGT-TTGGA-ATTGTCTCCGGGACCAAGTTTGTCCTC 490
Query 866 CAAGGTGGAAAAATTGTTGGGTTTCACGGACGTTCGACCGACGTTCTAG-ACTCCCTCGG 924
|||||||| ||||| |||||||||||||||||||| || || ||| | | |||| || ||
Sbjct 491 CAAGGTGGCAAAATCGTTGGGTTTCACGGACGTTCCACTGATGTT-TTGCACTCACTTGG 549
Query 925 GGCTTATATTTCATTGTCGCCCACTCCAAACTTGCATGGAAAGTGGACAAAGGTGGATG- 983
|| |||||||| ||| || |||||||||| |||| ||||||||||| ||||||||| |
Sbjct 550 AGCCTATATTTCTTTGCCGTCCACTCCAAAATTGCGTGGAAAGTGGATAAAGGTGGA-GC 608
Query 984 AAAATGGAGATGGTCCAGGGCTAAGATGCTCGCATGACATAGCACAGGTAGGAAACAAGA 1043
|||| ||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||
Sbjct 609 AAAAAGGAGAGGGTCCAGGGCCAAGATGCTCACATGACATAGCACAAGTAGGAAACAAGA 668
Query 1044 TTTACTCTTTTGGTGGTGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCT 1103
||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 669 TTTACTCCTTTGGTGGTGAGCTCACACCAAATCAGCCCATCGACAAACACCTTTATGTCT 728
Query 1104 TTGACATCGAGAGCCGGACTTGGTCCATTTCTCCAGCCACGGGAGACATTCCAACCCTCT 1163
| ||| |||||| ||||||||||||||||||||||||||| |||||| |||||| |||||
Sbjct 729 TCGACCTCGAGACCCGGACTTGGTCCATTTCTCCAGCCACCGGAGACGTTCCAAACCTCT 788
Query 1164 CTTGCCTAGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTGGAGGCCGAG 1223
||||| |||| ||| ||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct 789 CTTGCTTAGGCGTCCGTATGGTGTCAATTGGATCAAGCCTCTATGTCTTTGGAGGCCGAG 848
Query 1224 ACGCTTCACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACA-AACGAGTGGAAA 1282
|||||||||| |||||||||| |||||||||||||| |||| || | ||||||||||||
Sbjct 849 ACGCTTCACGAAAATACAACGGCTTCTACTCGTTTGATACGATCA-AGAACGAGTGGAAA 907
Query 1283 CTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGGCAGCCGAT 1342
|||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||
Sbjct 908 CTGCTAACTCCGGTCGAACAAGGACCCACTCCTCGTAGCTTCCACTCGATGGCAGCCGAT 967
Query 1343 GAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATACACTAGAC 1402
||| |||||||||||||||||||||||||||| ||||||| || ||||| |||||||||
Sbjct 968 GAGAAAAACGTTTACGTTTTCGGTGGAGTGAGCGCTACGGTTCGGCTCAAGACACTAGAC 1027
Query 1403 TCTTACAACATCGTTGATAAGAAGTGGTTTCATTGTTCGACTCCAGGAGATTCCCTTACC 1462
||||||||||||||||| | |||||| |||| |||||||| || |||| |||| ||| |
Sbjct 1028 GCTTACAACATCGTTGATCACAAGTGGGTTCAGTGTTCGACCCCGGGAGGTTCCTTTAGC 1087
Query 1463 GCAAGAGGAGGAGCAGGGCTCGAAGTGGTGCAAGGGAAGGTATGGGTTGTGTATGGGTTT 1522
|||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1088 ATAAGAGGAGGAGCCGGGCTCGAAGTGGTACAAGGGAAGGTATGGGTTGTGTATGGATTC 1147
Query 1523 AACGGATGTGAAGTAGATGATGTTCATTACTACGATCCTGTTCAAGACAAGTGGACACAA 1582
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1148 AACGGATGTGAAGTTGATGATGTTCATTGCTACGATCCTGTTCAAGACAAGTGGACACAA 1207
Query 1583 GTGGAAACATTCGGTGTGAGGCCTTCCGAAAGAAGTGTATTCGCTAGTGCGGCTCTTGGG 1642
|||||||| ||||||| || ||||| | || ||||| ||||||||||||| | |||||
Sbjct 1208 GTGGAAACGTTCGGTGAGAAGCCTTGTGCGAGGAGTGTGTTCGCTAGTGCGGTTGTTGGG 1267
Query 1643 AAACACATTGTGATTTTTGGAGGTGAAATTGCGATGGACCCGCTAGCTCACGTGGGTCCA 1702
||| || || |||| ||||||||||| || ||||||||||| |||||||| ||||||
Sbjct 1268 AAATACCTTTTGATCTTTGGAGGTGAGATAGCGATGGACCCAAAAGCTCACGAGGGTCCG 1327
Query 1703 GGTCAATTGACCGATGGAACTTTTGCATTGGACACAGAGACGTTGCAA-TGGGAGAGGCT 1761
|||||||||| | ||| |||||||| || || |||||||||||| || ||||||| |||
Sbjct 1328 GGTCAATTGAGTGGTGGGACTTTTGCGTTTGATACAGAGACGTTG-AAGTGGGAGAAGCT 1386
Query 1762 GGATAAGTTTGGTGGAGAGGAAGAGACTCCGAGTAGCAGAGGATGGACCGCGTCCACAAC 1821
|||||||||||||| ||||||||||||||| |||| |||||||||| | |||||||| ||
Sbjct 1387 GGATAAGTTTGGTGAAGAGGAAGAGACTCCAAGTATCAGAGGATGGTCTGCGTCCACGAC 1446
Query 1822 TGCGACCATTGGTGGCAAGAAAGGACTTGTGATGCATGGTGGTAAAGCTCCAACCAATGA 1881
|| |||||||| ||| ||||||||||| ||||||| |||||| ||||||| ||| |||||
Sbjct 1447 TGGGACCATTGATGGTAAGAAAGGACTGGTGATGCTTGGTGGGAAAGCTCAAACTAATGA 1506
Query 1882 CCGGTTTGATGATCTCTTCTTTTACGGAATTGACTCTGC 1920
||||||| ||||||||||||||| ||| ||||||||||
Sbjct 1507 TCGGTTTGGTGATCTCTTCTTTTATGGAGTTGACTCTGC 1545
> Ahg929469 jgi|Araly1|929469|scaffold_301926.1
Length=937
Score = 525 bits (284), Expect = 5e-148
Identities = 544/668 (81%), Gaps = 23/668 (3%)
Strand=Plus/Plus
Query 64 GATGGCCCAAAAGGTTGAAGCACAAGGA-GGAAATGGCGGTAACCAATGGGATGATGGAT 122
|||||| |||||||| |||||||||||| ||||| || || ||||||||||| |||||||
Sbjct 20 GATGGCTCAAAAGGTGGAAGCACAAGGAGGGAAA-GGAGGCAACCAATGGGACGATGGAT 78
Query 123 CCGAATACGACGCTGTGACCAAGATTCAAGTCGCAGCAGGCGGGA-ACGGAATTGAATAT 181
||| | | |||||||||||||||||||| |||| |||||| ||| ||| ||| ||||
Sbjct 79 CCGTACATGACGCTGTGACCAAGATTCAGGTCGGAGCAGG-TGGACTCGGCATTCAATAC 137
Query 182 GTTAAGTTC-ACATACGTCAAGAACGGACAAACCGAAGAAGCCCCTCTACGCGGTGTCAA 240
||| ||||| || || ||||||||||||||||| |||||||| ||||| ||||| ||||
Sbjct 138 GTTCAGTTCGAC-TATGTCAAGAACGGACAAACTGAAGAAGCTCCTCTTCGCGGCATCAA 196
Query 241 GGGCCGTAGTTTCGAAGCAGATCCGTTTGTGATAAACCATCCGGAGGAGCACTTAGTTTC 300
||||||||| ||| ||| |||||||||||||| |||||||| ||||| ||||| |||||
Sbjct 197 AGGCCGTAGTATCGCAGCTGATCCGTTTGTGATCAACCATCCAGAGGAACACTTGGTTTC 256
Query 301 TGTAGAAGGTCGGTATAACCCTGAAGGACTTATTCTAGGGC-TAACGTTCAAATCCAACA 359
|||||||||| |||||||||||||||| |||||| ||||| ||| ||||||||| ||||
Sbjct 257 TGTAGAAGGTTGGTATAACCCTGAAGGTGTTATTCAAGGGCTTAA-GTTCAAATCGAACA 315
Query 360 AGAAGACTTCTGATCTCATTGGATATGAAGATGGTACACCGTTCACTCTCCAAGTTCAAG 419
|||| ||||||||| |||||||||| || |||||||| | |||||||||||||||||||
Sbjct 316 AGAAAACTTCTGATGTCATTGGATACGACGATGGTACTCAATTCACTCTCCAAGTTCAAG 375
Query 420 ACAAGAAGATCGTTGGATTTTATGGCTTCGCTGGAAACAATCTCCATTCTCTTGGAGCGT 479
||||||||||| ||| ||| |||| || |||||| ||||||| |||||||||| || |
Sbjct 376 ACAAGAAGATCACTGGCTTTCATGGGTTTGCTGGAGACAATCTTAATTCTCTTGGGGCTT 435
Query 480 ACTTTGCTCCGTTGACTAATGTAACCCCC-TTGAA---TGCCAAAAAGCTAGAAGCAAAG 535
|||||||||||||||||| | | | |||| |||| |||||| ||||| ||||
Sbjct 436 ACTTTGCTCCGTTGACTACT-TCAGCCCCGTTGATCCCTGCCAAGAAGCTTCCAGCACTT 494
Query 536 GGTGGTGAC-ACGGGAGATATATGGGATGATGGTGTTTACGATAATGTTA-GAAAGGTAT 593
||| |||| | || | | |||||| ||||||| ||| || ||||| ||| |||
Sbjct 495 GGTAGTGATGAAGGAAC-TGCATGGGACGATGGTGCTTATAATGGTGTTAAGAA-GGTGC 552
Query 594 ATGTAGGGCAAGCCCAATATGGTATAGCCTTCG-TCAAGTTTGAGTATGTCAATGGTTCT 652
|| |||| |||| | ||||| | || || | ||||||||||||||||||||||||
Sbjct 553 ATATAGGTCAAGGACTCGATGGTGTGGCAG-CGGTTAAGTTTGAGTATGTCAATGGTTCT 611
Query 653 CAAGTGGTTGTTGGAGATGAACATGGAAAGAAGACAG-AGCTAGGAGTT-GAAGAGTTTG 710
||| | |||||||||||||||| |||||||| ||| | || || || |||||||| |
Sbjct 612 CAAATTGTTGTTGGAGATGAACGTGGAAAGACGACTCTA-CTCGGC-TTCGAAGAGTTCG 669
Query 711 AGATTGAT 718
| ||||||
Sbjct 670 ACATTGAT 677
> Ahg930637 jgi|Araly1|930637|scaffold_303094.1
Length=257
Score = 339 bits (183), Expect = 7e-92
Identities = 235/260 (90%), Gaps = 4/260 (2%)
Strand=Plus/Plus
Query 1160 CTCTCTTGCCTAGGTGTCTGTATGGTGTCAATAGGATCGACCCTCTATGTCTTTGGAGGC 1219
|||||||| |||||||| |||||||| ||| |||||||||||| |||||||||||||||
Sbjct 1 CTCTCTTGATTAGGTGTCCGTATGGTGGCAACAGGATCGACCCTTTATGTCTTTGGAGGC 60
Query 1220 CGAGACGCTTCACGTCAATACAACGGTTTCTACTCGTTTGACACGACCACAAACGAGTGG 1279
|||||||||||| | |||||||||||||||||||| ||||||||| |||||||| ||
Sbjct 61 CGAGACGCTTCATGCCAATACAACGGTTTCTACTC---AGACACGACCCCAAACGAGAGG 117
Query 1280 AAACTGCTAACTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCAATGGCAGCC 1339
||||| ||| |||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 118 AAACTCCTATCTCCGGTCGAAGAAGGACCCACTCCTCGTAGTTTCCACTCGATGACAGCC 177
Query 1340 GATGAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTGCTACGGCACGACTCAATACACTA 1399
|||||||||||||||||||||||||||||||||||| |||||| || | || ||||||
Sbjct 178 GATGAGGAAAACGTTTACGTTTTCGGTGGAGTGAGTTTTACGGCCCGGTT-AAGACACTA 236
Query 1400 GACTCTTACAACATCGTTGA 1419
||||||||||||||||||||
Sbjct 237 GACTCTTACAACATCGTTGA 256
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79227709600
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5