BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G16550.1
Length=1476
Score E
Sequences producing significant alignments: (Bits) Value
Ahg479118 jgi|Araly1|479118|fgenesh2_kg.3__1819__AT3G16550.1 2226 0.0
Ahg479117 jgi|Araly1|479117|fgenesh2_kg.3__1818__AT3G16540.1 411 1e-113
Ahg907997 jgi|Araly1|907997|Al_scaffold_0002_1078 226 4e-58
Ahg907996 jgi|Araly1|907996|Al_scaffold_0002_1077 156 5e-37
> Ahg479118 jgi|Araly1|479118|fgenesh2_kg.3__1819__AT3G16550.1
Length=1503
Score = 2226 bits (1205), Expect = 0.0
Identities = 1415/1506 (94%), Gaps = 56/1506 (4%)
Strand=Plus/Plus
Query 1 ATGGTGTCCCGGTACTCGAGAGCTCTACTCCCGACGATAACAATCTCTAGCCGGATCGCT 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1 ATGGTGTCCCGGTACTCGAGAGCTCTACTCCCGACGGTAACAATCTCTAGCCGGATCGCT 60
Query 61 ACTATTGTTCTTCCGTTTGCATTAACTCGCGGAAGAAAGATCCATACCATGTCGAAGGAT 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AATATTGTTCTTCCGTTTGCATTAACTCGCGGAAGAAAGATCCATACCATGTCGAAGGAT 120
Query 121 GAGGAATGGTGGAAGAAAATAAG-AAAAAGTCCTCCCGTTGATGAATTGATGTTGGAGTC 179
|||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||
Sbjct 121 GAGGAATGGTGGAAGAAAAT-AGAAAAAAGTCCTCCCGTTGATGAATTGATGCTGGAGTC 179
Query 180 GGTGGTAGAGGTCTTCACTGACTCTACCAAGTATAGCAAAGTCAAACCTTGGCAGACTCT 239
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 180 GGTGGTAGAGGTCTTCACTGACTCTACCGAGTATAGCAAAGTCAAACCTTGGCAGACTCT 239
Query 240 TAACCAAGAATCATATGGGGGCTCTGGATTTGCAATCGCGGGAAAGAAAATTCTTACGAA 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TAACCAAGAATCATATGGGGGCTCTGGATTTGCAATCGCGGGAAAGAAAATTCTTACGAA 299
Query 300 CGCTCATGTGGTGGAGGGGATGAATGATCACATATTCGTGCACGTCAAAAGACATGGCTC 359
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 300 CGCTCATGTGGTGGAGGGGATGAATGATCACACATTCGTGCACGTGAAAAGACATGGCTC 359
Query 360 TCAAGTCAAATACAAAGCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCATCTT 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TCAAGTCAAATACAAAGCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCATCTT 419
Query 420 GGAGATCGATAGCGACGAGTTTTGGAAGGGTATGAATCCCTTGGAGTTCGGAGACATACC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GGAGATCGATAGCGACGAGTTTTGGAAGGGTATGAATCCCTTGGAGTTCGGAGACATACC 479
Query 480 GCCTCTCAATGAAATTGTATATGTTGTTGGTTATCCAAAAGCTGGTGAAACAATATGCGT 539
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 480 GCCTCTCAATGAAATTGTATATGTTGTTGGTTATCCAGAAGCTGGTGAAACAATATGCGT 539
Query 540 TACAAAAGGTGTTGTAACTGGAGTTAAAACTGGAAATTACCTTCGAAGTTCCACTAAACT 599
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 540 TACAAAAGGTGTTGTAACTGGAGTTAAAACTGGAAATTACCTTCAAAGTTCCACTAAACT 599
Query 600 ACTGACAATACATATTGACGCAACTACCTACGGTGGAAATAGTGGTGGCCCGGTTATTAC 659
|||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 600 ACTGACAATACAAATTGACGCAACTACCAACGATGGAAATAGTGGTGGCCCGGTTATTAC 659
Query 660 AGGAGACAAAGTCCTTGGTGTACTATTTCAA-ATTCTTGGAGATAAGAAAAGTACAGGTG 718
|||| |||||||| |||||||| |||||||| | |||||||||| |||||||||||||||
Sbjct 660 AGGAAACAAAGTCGTTGGTGTAGTATTTCAAGA-TCTTGGAGATGAGAAAAGTACAGGTG 718
Query 719 TTGTAATCCCAACCCCAATAATTAGACATTTCATAACTGGTGCAGAAGAAAGCTCCCACA 778
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 719 TCGTAATCCCAACCCCAATAATTAGACATTTCATAACTGGTGCAGAAGAAAGCTCCCATA 778
Query 779 ACGCTGTTTTTGGCTCACTAGTTTTATCATGTCAGTCAATGAAAAATGCTCAAATTCGTA 838
|||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 779 ACGCTGTTTTCGGCTCACTAGTTCTATCATGTCAGTCAATGGAAAATGCTCAAATTCGTA 838
Query 839 ATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAAACAAAATAAACTCATCGT 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 ATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAAACAAAATAAACTCATCGT 898
Query 899 CGGGGGCTCACAAAATTCTGAGAAAAGATGACATCATTCTCGCAATTGATGGTGTTCCA- 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 CGGGGGCTCACAAAATTCTGAGAAAAGATGACATCATTCTCGCAATTGATGGTGTTCCAA 958
Query 958 --G----T-------C----C-TTTCCGAAATGAG-A-CGAATAAGTTTCAATCATTTTA 997
| | | | ||| ||||||||| | ||||||||||||||||||||||
Sbjct 959 TAGGAAATGATGAAACATGTCCTTTTCGAAATGAGGAACGAATAAGTTTCAATCATTTTA 1018
Query 998 TTTCTATGAAGAAACCAGATGAAAATATCTTAGTAAAGGTTCTAAGGAAGGGGAAAGAGC 1057
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1019 TTTCTATGAAGAAACCAGATGAAAAAATCTTAGTAAAGGTTCTAAGGAAGGGAAAAGAGC 1078
Query 1058 ATGAGTACAATATCAGTTTAAAGCCGGT--G--AAACCACACATTCAAGTGCAACAATAT 1113
|||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||
Sbjct 1079 ATGAATACAATATCAGTTTAAAGCCGGTAAGTGAAACCACACATGCAAGTGCAACAATAT 1138
Query 1114 TATA-A-CCTTCCAAGTTATTACATATTCGGTGGTTTTGTTTTTGTGCCTCTCACTAAAT 1171
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 TATATAACCTTCCAAGTTATTACATATTCGGTGGTTTTGTTTTTGTGCCTCTCACTAAAT 1198
Query 1172 CGTACATTGATGAT---A----AG--T----ACTACA--A--A--A-----TTACCGATG 1207
|||||||||||||| | || | | || | | | | |||||||||
Sbjct 1199 CGTACATTGATGATTTGAGCTTAGAATGTGTATTAAATGATGAGTACAAAATTACCGATG 1258
Query 1208 AACAACATGTCATAATCTCTCAGGTAATGCCAGATGACATTAACAAAGGATACAGTAATT 1267
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AACAACAAGTCATAATCTCTCAGGTAATGCCAGATGACATTAACAAAGGATACAGTAATT 1318
Query 1268 TCAAAGATTTACAGGTGGAAAAAGTAAACGGAGTGAAAGTAAAGAATTTGAAACACTTAC 1327
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1319 TCAAAGATTTACAGGTGGAAAAAGTAAACGGAGTGAAAGTAAAGAATTTAAAACACTTAC 1378
Query 1328 GTGAACTAATAGAGGGATGTTTTAGCAAAGATCTGAGGCTGGACTTGGAGAATGACAAAG 1387
||||||| ||||||||||||| | |||||||||||||| |||||||||| ||||||||||
Sbjct 1379 GTGAACTGATAGAGGGATGTTGTGGCAAAGATCTGAGGTTGGACTTGGAAAATGACAAAG 1438
Query 1388 TGATGGTACTCAACTATGAATCTGCTAAAAAGGCAACATTTGAGATCTTGGAACGTCACA 1447
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1439 TTATGGTACTCAACTATGAATCTGCTAAAAAGGCAA-ATTTGAGATCTTGGAACGTCACA 1497
Query 1448 ATATAA 1453
||||||
Sbjct 1498 ATATAA 1503
> Ahg479117 jgi|Araly1|479117|fgenesh2_kg.3__1818__AT3G16540.1
Length=1485
Score = 411 bits (222), Expect = 1e-113
Identities = 380/450 (84%), Gaps = 36/450 (8%)
Strand=Plus/Plus
Query 67 GTTCTTCCGTTTGCATTAACTCGCGGAAGAAAGATCCA-T--A-CCATGTCGAAG-GATG 121
|||||||| ||||| |||||| || ||||||||||||| | | |||| || | || |
Sbjct 199 GTTCTTCCATTTGCGTTAACTGGCCGAAGAAAGATCCATTCAATACATGAAGATGCGAAG 258
Query 122 -AG---GAATGGTGGAAGAAAATAAGAA-AAAGTCCTCCCGTTGATGAATTGATGTTGGA 176
|| ||| ||||||||||||| |||| |||||| ||| |||||||||||| || ||||
Sbjct 259 AAGCTAGAACGGTGGAAGAAAAT-AGAAGAAAGTCGTCCTGTTGATGAATTGGTGCTGGA 317
Query 177 GTCGGTGGTAGAGGTCTTCACTGACTCTACCAAGTATAGCAAAGT-CAAACCTTGGCAGA 235
||||| |||||||| ||| ||||||||||| |||||| ||| | ||||||||||||||
Sbjct 318 TTCGGTTGTAGAGGTATTCTCTGACTCTACCGGGTATAG-AAAATCCAAACCTTGGCAGA 376
Query 236 C-TCTTAACCAAG--A-ATC---AT-A---T--G-G---GGGCTCTGGATTTGCAATCGC 278
| | || | |||| | | | || | | | | |||| ||||||||||||||||
Sbjct 377 CTTGTT-A-CAAGAAAGAGCGAGATAAGCTTGAGAGAAAGGGCACTGGATTTGCAATCGC 434
Query 279 GGGAAAGAAAATTCTTACGAACGCTCATGTGGTGGAGGGG-ATGAATGATCACATATTCG 337
|||||||||||||||||||||||||||||||||| | || ||||||||||||| |||||
Sbjct 435 GGGAAAGAAAATTCTTACGAACGCTCATGTGGTG-ATGGCTATGAATGATCACACATTCG 493
Query 338 TGCACGTCAAAAGACATGGCTCTCAAGTCAAATACAAAGCAAAAGTTCAAAAGATTGCAC 397
|| | ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 494 TGGATGTCAAAAGACATGGCTCTCAAATCAAATACAAAGCAAAAGTTCAAAAGATTTCAC 553
Query 398 ATGAGTGTGATTTGGCCATCTTGGAGATCGATAGCGACGAGTTTTGGAAGGGTATGAATC 457
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 554 ATGAATGTGATTTGGCCATCTTGGAGATCGATAGTGACGAGTTTTGGAAGGGTATGAATC 613
Query 458 CCTTGGAG-TTCGGAGACATACCGCCTCTC 486
|||||||| || ||||||||||| ||||||
Sbjct 614 CCTTGGAGCTT-GGAGACATACCACCTCTC 642
Score = 187 bits (101), Expect = 2e-46
Identities = 125/137 (91%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 821 AAAATGCTCAAATTCGTAATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAA 880
|||||| |||||| |||||||||| |||||||||| ||||| |||||||||||||||||
Sbjct 719 AAAATGTTCAAATCCGTAATCATTACAAGATGAGCCATGAAATGACAGGAATTCTTATAA 778
Query 881 ACAAAATAAACTCATCGTCGGGGGCTCACAAAATTCTGAGAAAAGATGACATCATTCTCG 940
||||||||||||| |||||||||||| |||||||| |||||||||| ||||| ||||| |
Sbjct 779 ACAAAATAAACTCGTCGTCGGGGGCTTACAAAATTTTGAGAAAAGACGACATTATTCTTG 838
Query 941 CAATTGATGGTGTTCCA 957
|||||||||||||||||
Sbjct 839 CAATTGATGGTGTTCCA 855
> Ahg907997 jgi|Araly1|907997|Al_scaffold_0002_1078
Length=1587
Score = 226 bits (122), Expect = 4e-58
Identities = 698/962 (73%), Gaps = 96/962 (10%)
Strand=Plus/Plus
Query 259 GGCTCTGGATTTGCAATCGCGGGAAAGAAAATTCTTACGAACGCTCATGTGGTGGAGGGG 318
||||||||||||| |||| |||||||||| ||||||||||||||||| | || | |
Sbjct 301 GGCTCTGGATTTGTAATCTCGGGAAAGAAGATTCTTACGAACGCTCA--T-GT--A---G 352
Query 319 ATGAATGATCACATATTCGTGCACGTCA-AAAGACATGGCTCTCAAGT-CAAA-TACAAA 375
|| |||||||||||| |||| || | ||| |||||| |||| | |||| ||||||
Sbjct 353 TTG-CTGATCACATATTTTTGCAAGTTAGAAA-ACATGG--CTCACCTACAAATTACAAA 408
Query 376 GCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCATCTTGGAGATCGATAGCGAC 435
||| |||||| | | ||| |||||| |||||||||||||| ||||||||||||| ||
Sbjct 409 GCAGAAGTTCGAGCGGTTGGACATGAATGTGATTTGGCCATTTTGGAGATCGATAATGAA 468
Query 436 GAGTTTTGGAAGGGTATGAATCCC-TTGGAGTTCGGAGACATACCGC-CTCTCAATGAAA 493
||||||||| ||| | || ||||| ||||| ||||||| ||||| | |||| ||| ||
Sbjct 469 GAGTTTTGGGAGGATCTG-ATCCCTTTGGAACTCGGAGAGATACC-CTCTCTGGATG-AA 525
Query 494 T-TGTAT-ATGTTGTT-GGTTATCCAAAAGCTGGTGA-AACAATATGCGTTACAAAAGGT 549
| ||| | ||| || || || || | | |||||| | | | | | |||| ||||||
Sbjct 526 TCTGT-TGCCGTT-TTAGGCTACCCTCATGGTGGTGACAGC-CTTTCCATTACTAAAGGT 582
Query 550 GT-TGTAACTGGAGTT-AAAACTGGA-AATTA-CCT-TCGAAGTTCCACTAAACTACT-G 603
| ||| || ||||| || | | | || || || || || ||||| |||||| |
Sbjct 583 -TATGTTTCTAGAGTTGAATA-TACACAA-TATGCTCACGGAG--GCACTACACTACTCG 637
Query 604 ACAATACATATTGACGCAACTACCTACGGTGGAAATAGTGGTGGCCCGGTTATTACAGGA 663
| ||||| | || || ||| || ||||||||||||||| || | || | ||||
Sbjct 638 -CTATACAAACAGATGCGGCTATAAACTCTGGAAATAGTGGTGGTCCAGCAATCATAGGA 696
Query 664 GA-CAAA-GTCCTTGGTGTA-CTATTTC-AAATTCTTGGA-GATAAGAAAAGTACAGGTG 718
| ||| | | |||||| || |||| ||| | | | | ||| || || |||
Sbjct 697 AATAAAACG-GC-AGGTGTAGCT-TTTCAAAAAT-GTACATCTTCAGATAA-TATAGG-A 750
Query 719 T-TGTAATCCCAACCCCAATAATTAGACATTTCATAACTGGTGCAGAAGAAAGCTCCCAC 777
| ||||||| || ||| |||| | |||||| |||||| || ||||||| | ||
Sbjct 751 TACATAATCCCGACTCCAGTAATAACACATTTTTTAACTGCTGTTGAAGAAA-AT-GGAC 808
Query 778 -A-ACGCT-GTTTTTGGCTCACTAG-TTTTATCATGTC-AGTCAATGAAAAATGCTCAAA 832
| | | | |||| | || | |||| || || | || | | ||| | ||| |||||
Sbjct 809 AATATGGTGGTTTCT-GCACGCTAGACCTT-TCTTATCAACT-TATGGAGAATTCTCAAC 865
Query 833 TTCGTAATCATTTTAAGATGAGCCCTGAAACGACAGGAATTCTTATAAACAAAATAAACT 892
| |||||||||||||||||| | ||||||| |||||| |||||||||||| ||||||||
Sbjct 866 TCCGTAATCATTTTAAGATGGGTCCTGAAATGACAGGGATTCTTATAAACGAAATAAAC- 924
Query 893 CATC-GTCGGGGGCTCACAAAA-TTCTGAGAAAAGATGACATCATTCTCGCAATTGATGG 950
| | ||| | ||| |||||| | | |||||||||||||||||||||||||||||||
Sbjct 925 CCGCTGTCCGATGCTTACAAAAGGT-TAAGAAAAGATGACATCATTCTCGCAATTGATGA 983
Query 951 TGTTCC-A--G----T----C--------CTTTCCGAAATGAG-A-CGAAT-AAGTTTCA 988
||||| | | | | |||| || || || | ||||| || |||||
Sbjct 984 TGTTCTTATAGGAAATGATGCGAAAGTTGCTTTTCGGAACAAGGAACGAATCAA-TTTCA 1042
Query 989 ATCATTTTATTTCTATGAAGAAACCAGATGAAA-ATATCTTAGT-AAAGGTTCTAAG-GA 1045
|||||||| |||| ||||||||| | |||||| | ||||| | |||| || | || ||
Sbjct 1043 ATCATTTTGTTTCGATGAAGAAATTAAATGAAACAG-TCTTACTTAAAGTTT-TGAGAGA 1100
Query 1046 AGGGGAAAGAGCATGAGTA-CAATATCAGTTTAAAGCCGGTGAAACCACACATTCAAGTG 1104
||||||||||||||| | || ||||||||||| || ||| ||| | ||| ||||
Sbjct 1101 -GGGGAAAGAGCATGATTTTCAC-ATCAGTTTAAAACCCGTGCCACCGCTGGTTCCAGTG 1158
Query 1105 CAACAATATTATAACCTTCCAAGTTATTACATATTCGGTGGTTTTGTTTTTGTGCCTCTC 1164
|| || ||| |||| |||||||||||||||||||||| || ||||| ||||| || |||
Sbjct 1159 CATCAGTATGATAAGCTTCCAAGTTATTACATATTCGCAGGCTTTGTATTTGTACCACTC 1218
Query 1165 AC 1166
||
Sbjct 1219 AC 1220
> Ahg907996 jgi|Araly1|907996|Al_scaffold_0002_1077
Length=1662
Score = 156 bits (84), Expect = 5e-37
Identities = 386/527 (73%), Gaps = 39/527 (7%)
Strand=Plus/Plus
Query 259 GGCTCTGGATTTGCAATCGCGGGAAAGAAAATTCTTACGAACGCTCATGTGGTGGAGGGG 318
|||||||| |||| |||| ||||||||| ||||||||||| |||||||| || | |
Sbjct 397 GGCTCTGGTTTTGTAATCTCGGGAAAGAGGATTCTTACGAATGCTCATGTAGT--A---G 451
Query 319 ATGAATGATCACATATTCGTGCACGT-CAAAAGACATGGCTCTCAAGTC--AAA-TACAA 374
|| || | |||| | || | || | |||| ||||| | || | | ||| |||||
Sbjct 452 CTG-ATCA-AACAT-CT-GTTAAAGTCCGAAAG-CATGG-T-TC-ACCCAAAAAGTACAA 503
Query 375 AGCAAAAGTTCAAAAGATTGCACATGAGTGTGATTTGGCCATCTTGGAGATCGATAGCGA 434
||||||||||||| | ||| || || |||||||||||||||||||||||||||| |||
Sbjct 504 AGCAAAAGTTCAAGTGGTTGGTCACGAATGTGATTTGGCCATCTTGGAGATCGATAACGA 563
Query 435 CGAGTTTTGGAAGGGTATGAATCCC-TT-GGAGTTCGGAGACATACCGCCTCTCAA-TGA 491
||||||||| ||||| | | ||| || |||| | ||||||||||| | || ||| ||
Sbjct 564 AGAGTTTTGGGAGGGTCTTA--CCCATTTGGAGCTGGGAGACATACC-C-TCCCAAATGG 619
Query 492 AAT-TGTATATGTTGTTGGTTATCCAAAAGCTGGTGAAACAATATGCGTTACAAAAGGTG 550
| | ||| || ||||| |||||| ||| |||||| | |||| |||||| ||||||
Sbjct 620 ATTCTGTGGCGGTCGTTGGCTATCCAGAAGGTGGTGATAGTATATCCGTTACGCAAGGTG 679
Query 551 TTGTAACTG-GAGTTAAAACTG-GAA-ATTACCTTCGA-AGTTCCACTAAACTACTGACA 606
|||| | | ||||| | ||| ||| || || || | || ||||| | || ||| |
Sbjct 680 TTGTGTC-GAGAGTTGTA-CTGAGAAGAT-ACAGTC-ACAGCTCCACCGAGTTATTGAAA 735
Query 607 ATACATATTGACGCAACTACCTACGGTGGAAATAGTGGTGGCCCGGTTATTACAGGAGAC 666
||||| || || ||| ||| || |||||||||||| || ||||| || | ||| ||
Sbjct 736 ATACAAATAGATGCAGCTATAAACTCTGGAAATAGTGGCGGTCCGGTAATCATGGGAAAC 795
Query 667 AAAGTCCTTGGTGTA-CTATTTCAAATTC-TTGGAGATAAGAAAAGTACAGG-TGTTGTA 723
||||| |||||||| | |||| ||| | ||| | | ||| || ||| | ||
Sbjct 796 AAAGTGGTTGGTGTAGC-ATTTGAAAGCCGTTGCTGTTCTGAACT-TATAGGCTACA-TA 852
Query 724 ATCCCAACCCCAATAATTAGACATTTCATAACTGGTGCAGAAGAAAG 770
|| ||||| ||| | ||||||||||| ||| ||||| ||||||||
Sbjct 853 ATTCCAACTCCAGTCATTAGACATTTTTTAAATGGTGTTGAAGAAAG 899
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55230855250
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5