BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G16650.1
Length=1724
Score E
Sequences producing significant alignments: (Bits) Value
Ahg479131 jgi|Araly1|479131|fgenesh2_kg.3__1832__AT3G16650.1 2562 0.0
Ahg493295 jgi|Araly1|493295|fgenesh2_kg.7__2728__AT4G15900.1 1354 0.0
Ahg895990 jgi|Araly1|895990|Al_scaffold_0006_3986 494 1e-138
> Ahg479131 jgi|Araly1|479131|fgenesh2_kg.3__1832__AT3G16650.1
Length=1671
Score = 2562 bits (1387), Expect = 0.0
Identities = 1585/1678 (94%), Gaps = 23/1678 (1%)
Strand=Plus/Plus
Query 1 CCTATTTCCCTCTCTTCTCTTCCGTCT-TTCTCGTTCTGTTTCTGATTGTTCGTGTAAAA 59
||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||||||
Sbjct 1 CCTATTTCCCTCTCTTCTC-TCCGTCTCTT-TCGTTCTGATTCTGATTGTTCGTGTAAAA 58
Query 60 CCCTAGAATGACGATGAT-AGCTTTGAACAGGGAGGTCGAAACTCAGTCACTGAAAAAAC 118
|||||| ||||||||| | || ||||| || ||| ||||| |||||||||||||||||||
Sbjct 59 CCCTAG-ATGACGATGCTAAG-TTTGAGCACGGAAGTCGATACTCAGTCACTGAAAAAAC 116
Query 119 TCAGTCTAAAATCTGTTAGACGAGCTCGTGAAATTTTCTCCCCCGTCCATGGCCAATTTC 178
|||| || |||||||| | ||||||||||||| |||||||||||||||||||||||||||
Sbjct 117 TCAGCCTCAAATCTGTAACACGAGCTCGTGAACTTTTCTCCCCCGTCCATGGCCAATTTC 176
Query 179 CTCAGCCTGATCCTGAAAGCAAAAGAATTCGGCTCTGCCATAAGATTCAAGTTGCATTTG 238
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 177 CTCCGCCTGATCCTGAAAGCAAAAGAATTCGGCTCTGCCATAAGATTCAAGTTTCATTTG 236
Query 239 GAGGCGTAGAACCTGCAAGTAAGCCTACACGTATTGCTGACCATAACAGTGAAAAGACGG 298
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 237 GAGGCGTAGAACCTGCAAGTAAGCCTACACGTAGTGCTGAACATAACAGTGAAAAGACGG 296
Query 299 CTCCATTGAAAGCCCTTGCGCTTCCAGGTCCAAAAGGGTCCAAGGAACTTCGAAAAAGCG 358
|||||| ||| |||||||| |||||||||||| |||| |||||||||||||||||| ||
Sbjct 297 CTCCATCGAATGCCCTTGCCCTTCCAGGTCCAGAAGGTTCCAAGGAACTTCGAAAAGGCA 356
Query 359 CAACAGAGAAAGCTTTAGTTGTTGGTCCAACTTTACCGCCAAGAGACTTGAACAATACTG 418
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 357 CAACAGAGAAAGCTTTAGTTGTTGGTCCAACTTTACCGTCAAGAGACTTGAACAATACTG 416
Query 419 GTAATCCAGGCAAAAGCACGGCCATTCTTCCTGCACCTGGATCATTTTCCGAAAGAAATC 478
||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct 417 GTAATCCAGGCAAAAGCACGGCCATTCTTCCTGCATCTGGATCCTTTTCTGAAAGAAATC 476
Query 479 TGTCAACTGCTGCTTTAATGGAGAGAATGCCTAGTAGATGGCCCCGTCCAGAGTGGCATG 538
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 477 TGTCAACTGCTGCTTTAATGGAGAGAATGCCTAGTAGATGGCCTCGTCCAGAGTGGCATG 536
Query 539 CACCATGGAAGAATTACAGGGTGCTCCAGGGACACTTGGGTTGGGTCAGATCTGTTGCGT 598
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 537 CACCATGGAAGAATTACAGGGTGATCCAGGGACACTTGGGTTGGGTCAGATCTGTTGCGT 596
Query 599 TTGACCCAAGCAATGAATGGTTTTGCACTGGTTCAGCTGATCGTACCATCAAGATATGGG 658
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 TTGACCCAAGTAATGAATGGTTTTGCACTGGTTCAGCTGATCGTACCATCAAGATATGGG 656
Query 659 ATGTAGCGACTGGAGTTCTGAAACTCACACTTACTGGACATATAGGGCAAGTACGAGGCC 718
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 ATGTAGCGACCGGAGTTCTGAAACTCACACTTACTGGACATATAGGGCAAGTACGAGGCC 716
Query 719 TCGCTGTAAGCAATAGACATACCTATATGTTTTCTGCTGGTGATGACAAGCAAGTCAAAT 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 TCGCTGTAAGCAATAGACATACCTATATGTTTTCTGCTGGTGATGACAAGCAAGTCAAAT 776
Query 779 GCTGGGACCTTGAGCAGAATAAGGTTATTCGATCTTATCATGGTCATTTGCATGGCGTTT 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 GCTGGGACCTTGAGCAGAATAAGGTTATTCGATCTTATCATGGTCATTTGCATGGCGTTT 836
Query 839 ACTGTTTAGCTCTTCATCCTACTCTTGATGTTGTACTAACCGGAGGGCGAGACTCTGTCT 898
||||||||||||||||||| || || |||||| |||||||||||||||||||||||||||
Sbjct 837 ACTGTTTAGCTCTTCATCCAACGCTAGATGTTATACTAACCGGAGGGCGAGACTCTGTCT 896
Query 899 GCAGGGTATGGGATATCCGTACGAAGATGCAAATTTTTGTACTCCCACATGACAGC-GAT 957
|||||||||||||||||||||||||||||||||||||||||||||||||| || || |||
Sbjct 897 GCAGGGTATGGGATATCCGTACGAAGATGCAAATTTTTGTACTCCCACATAAC-GCAGAT 955
Query 958 GTTTTTTCCGTTTTGGCCCGCCCAACTGATCCACAAGTTATTACAGGGTCTCATGACTCA 1017
|||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 956 GTTTTTTCCGTTGTAGCCCGTCCAACTGATCCACAAGTTATTACAGGGTCTCATGACTCA 1015
Query 1018 ACCATCAAATTTTGGGACCTCCGATATGGCAAATCGATGGCAACCATAACGAATCATAAG 1077
||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||
Sbjct 1016 ACCATCAAATTTTGGGATCTCCGATTTGGCAAATCGATGTTAAATATAACGAATCATAAG 1075
Query 1078 AAGACTGTCCGAGCAATGGCTCTCCATCCGAAAGAGAATGATTTTGTTTCTGCATCAGCT 1137
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1076 AAGACTGTCCGAGCAATGGCTCTCCATCCGAAAGAGAATGCTTTTGTTTCTGCATCAGCT 1135
Query 1138 GACAACATCAAGAAGTTTAGCCTTCCTAAGGGAGAGTTTTGCCACAACATGCTTTCTCTA 1197
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 GACAATATCAAGAAGTTTAGCCTTCCTAAGGGAGAGTTTTGCCACAACATGCTTTCTCTG 1195
Query 1198 CAGAGAGACATAATTAACGCAGTGGCTGTGAATGAGGATGGCGTAATGGTCACTGGAGGT 1257
|||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||||
Sbjct 1196 CAGAGAGACACAATTAACGCAGTGGCTGCGAACGAGGATGGCGTAATGGCCACTGGAGGT 1255
Query 1258 GATAAAGGTGGCTTATGGTTCTGGGACTGGAAGAGTGGTCACAATTTCCAACGGGCAGAA 1317
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1256 GATAAAGGTGGCTTATGGTTCTGGGACTGGAAGAGTGGTCACAATTTCCAACAGGCAGAA 1315
Query 1318 ACTATTGTACAGCCTGGTTCGCTGGAGAGTGAAGCAGGTATATATGCAGCGTGTTACGAT 1377
|||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 1316 ACTATTGTACAGCCCGGTTCGCTGGAGAGTGAAGCCGGTATATACGCAGCGTGTTACGAT 1375
Query 1378 CAG-ACGGGTTCAAGGCTGGTAACGTGTGAGGGAGACAAAACAATAAAGATGTGGAAGGA 1436
|| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 1376 -AGGACGGGTTCAAGGCTGTTAACGTGTGAGGCAGACAAAACAATAAAGATGTGGAAGGA 1434
Query 1437 AGACGAGGATGCAACTCCTGAAACTCATCCTCTCAACTTCAAACCTCCCAAAGAGATCAG 1496
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435 AGACGAGAATGCAACTCCTGAAACTCATCCTCTCAACTTCAAACCTCCCAAAGAGATCAG 1494
Query 1497 ACGCTTCTGAGGTTTCCCTCTCTTACAAGTTACACCTCTCTAATATCAAACTCGAAGCCA 1556
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1495 ACGCTTCTGAGGTTTCTCTCTCTTACAAGTTACACCTCTCTAATCCCAAACTCGAAGTCA 1554
Query 1557 GaaaaaaaaaaTCACTAATCTCACTCTGGATTaaaaaaaa---CCTTGGTTATGC--TAT 1611
|||||||||| ||||||||||||||||||| |||||||| ||||| ||||| |||
Sbjct 1555 GAAAAAAAAAC-CACTAATCTCACTCTGGATAAAAAAAAAAAACCTTGTTTATGTGATAT 1613
Query 1612 AT----A--ATTTCTTCTTCAAGATAGATATGGaaaaa-aaCAGCATTGTAGTTTCTT 1662
|| | | ||||||||||||||||| | || |||| |||||||||||||||||||
Sbjct 1614 ATTTTTACCAGTTCTTCTTCAAGATAGAGAAGGGAAAATAACAGCATTGTAGTTTCTT 1671
> Ahg493295 jgi|Araly1|493295|fgenesh2_kg.7__2728__AT4G15900.1
Length=1666
Score = 1354 bits (733), Expect = 0.0
Identities = 1214/1440 (84%), Gaps = 57/1440 (4%)
Strand=Plus/Plus
Query 95 TCGAAACTCAGTCACTGAAAAAACTCAGTCTAAAATCTGTTAGACGAGCTCGT-GAAATT 153
||||| | |||||||||||||| |||||||| ||||| | | |||| | | | ||| ||
Sbjct 75 TCGAAGCACAGTCACTGAAAAAGCTCAGTCTCAAATCCCTCAAACGATCAC-TCGAACTT 133
Query 154 TTCTCCCCCGTCCATGGCCAATTTC-CTCAGCCTGATCCTGAAAG-CAA-AAGAATTCGG 210
||||| ||||||||||||||| ||| ||| ||||| |||| ||| ||| ||| |||||
Sbjct 134 TTCTCTCCCGTCCATGGCCAA-TTCGCTCCTCCTGACCCTG-AAGCCAAGAAG-ATTCGT 190
Query 211 CTCTGCCATAAGATTCAAGTTGCATTTGGAGGCGTAGAACCTGCAAGT-AAGCCTACACG 269
||| |||||||||| ||||||| |||||||| ||||||||| ||| || ||| ||||
Sbjct 191 CTCAGCCATAAGATGAAAGTTGCGTTTGGAGGTTTAGAACCTGTGAGTCAA-CCTCCACG 249
Query 270 T-ATTGCTGACCATAACAGTGAAAAGAC-GGCTCCATTGAAA-GCCCTTGCGCTTCCAGG 326
| | |||||| || || ||| || | || || || ||| || ||||| ||| ||||
Sbjct 250 TCA-ACCTGACCGTAGCAATGAGCAGCCAGG-ACC-TTCAAATGCTCTTGCCCTTGCAGG 306
Query 327 TCCAAAAGGGTCCAAGGAACTTCGAAAAAGCG--CAACAGAGAAAGCT-TTAGTTGTTGG 383
||| |||||||||| | | | || ||||| | | ||||||| ||| || ||||||||
Sbjct 307 TCCTGAAGGGTCCAA-G-AGTACGCAAAAGGGTACGACAGAGAGTGCTCTT-GTTGTTGG 363
Query 384 TCCAACTTTACCGCC-AAGAGACTTGAACAATACT-GG-TAATCCAGGCAAAAGCACGGC 440
||||||||| | ||| || || ||||||||||| | || | || |||| |||||||| |
Sbjct 364 TCCAACTTTGCAGCCTAA-AGGCTTGAACAATA-TAGGTTCAT-CAGGGAAAAGCACCAC 420
Query 441 CATTCTTCCTGCACCTGGATCAT--TTTCCGAAAGAAATCTGTCAACTGCTGCTTTAATG 498
|||| | |||||| || ||| | | | | |||||||||||||||||||||||||||||
Sbjct 421 CATTATACCTGCAAATGTATCCTCGTAT-C-AAAGAAATCTGTCAACTGCTGCTTTAATG 478
Query 499 GAGAGAATGCCTAGTAGATGGCCCCGTCCAGAGTGGCATGCACCATGGAAGAATTACAGG 558
|||||||| || ||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 479 GAGAGAATACCGAGTAGATGGCCTCGGCCAGAGTGGCATGCACCATGGAAGAATTACAGG 538
Query 559 GTGC--TCCAGGGACACTTGGGTTGGGTCAGATCTGTTGCGTTTGACCCAAGCAATGAAT 616
|| | || |||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 539 GT-CATTCAAGGG-CACTTGGGTTGGGTCAGATCTGTTGCGTTTGACCCGAGTAATGAAT 596
Query 617 GGTTTTGCACTGGTTCAGCTGATCGTACCATCAAGATATGGGATGTAGCGACTGGAGTTC 676
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 597 GGTTTTGTACTGGTTCAGCTGATCGTACCATCAAGATATGGGATGTAGCAACTGGAGTT- 655
Query 677 TGAAA-CTCACACTTACTGGACATATAGGGCAAGTACGAGGCCTCGCTGTAAGCAATAGA 735
| ||| || ||||||||||| ||||| | ||||||||||||||| |||||||||||| ||
Sbjct 656 TTAAAGCTAACACTTACTGGGCATATCGAGCAAGTACGAGGCCTTGCTGTAAGCAATCGA 715
Query 736 CATACCTATATGTTTTCTGCTGGTGATGACAAGCAAGTCAAATGCTGGGACCTTGAGCAG 795
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 CATACCTATATGTTCTCTGCTGGTGATGACAAGCAAGTCAAATGCTGGGACCTTGAGCAG 775
Query 796 AATAAGGTTATTCGATCTTATCATGGTCATTTGCA-TGGCGTTTACTGTTTAGCTCTTCA 854
||||||||||| ||||||||||||||||| ||| | ||| || || || |||||||||||
Sbjct 776 AATAAGGTTATCCGATCTTATCATGGTCACTTG-AGTGGTGTCTATTGCTTAGCTCTTCA 834
Query 855 TCCTACTCTTG-ATGTTGTACTAACCGGAGGGCGAGACTCTGTCTGCAGGGTATGGGATA 913
|| ||| ||| ||||| || |||| || |||||||| |||||||||||||| |||||||
Sbjct 835 CCCAACT-TTGGATGTTTTATTAACAGGGGGGCGAGATTCTGTCTGCAGGGTGTGGGATA 893
Query 914 TCCGTACGAAGATGCAAATTTTTGTACTCCCA---CATGACAGCGAT-GTTTTTTCCGTT 969
| ||||| |||||||||||||||| |||| || ||||||| | | |||| ||| |||
Sbjct 894 TTCGTACCAAGATGCAAATTTTTGCACTCTCAGGACATGACAAC-ACCGTTTGTTCTGTT 952
Query 970 TTGGCCCGCCCAACTGATCCACAAGTTATTACAGGGTCTCATGACTCAACCATCAAATTT 1029
|| | || ||||| |||||||||||| | || || || |||||| | ||||| ||||||
Sbjct 953 TTCACTCGTCCAACAGATCCACAAGTTGTCACCGGATCACATGACACGACCATTAAATTT 1012
Query 1030 TGGGACCTCCGATATGGCAAATCGATGGCAAC-CATAACGA-ATCATAAGAAGACTGTCC 1087
|||||||| |||||||| ||| ||||| |||| | |||| | ||||||||||| ||||||
Sbjct 1013 TGGGACCTTCGATATGGAAAAACGATGTCAACGC-TAAC-ACATCATAAGAAGTCTGTCC 1070
Query 1088 GAGCAATGGCTCTCCATCCGAAAGAGAATGATTTTGTTTCTGCATCAGCTGACAACATCA 1147
|||||||| | |||||||| |||||||||| |||| |||||||||||||||||||||||
Sbjct 1071 GAGCAATGACCCTCCATCCTAAAGAGAATGCCTTTGCTTCTGCATCAGCTGACAACATCA 1130
Query 1148 AGAAGTTTAGCCTTCCTAAGGGAGAGTTTTGCCACAACATGCTTTCTCTACAGAGAGAC- 1206
|||| ||||||||||| ||||||||||||||||||||||||||||| | ||||| | ||
Sbjct 1131 AGAAATTTAGCCTTCCAAAGGGAGAGTTTTGCCACAACATGCTTTCGCAACAGAAA-ACC 1189
Query 1207 ATAATTAACGCAGTGGCTGTGAATGAGGATGGCGTAATGGTCACTGGAGGTGATAAAGGT 1266
|||||||| ||| ||||||| || |||||||| |||||||||||||||||||| || ||
Sbjct 1190 ATAATTAATGCAATGGCTGTAAACGAGGATGGTGTAATGGTCACTGGAGGTGACAATGGA 1249
Query 1267 GGCT-TATGGTTCTGGGACTGGAAGAGTGGTCACAATTTCCAACGGGCAGAAACTATTGT 1325
| | |||||||||||||||||||||||||||||| |||||| | | |||||||||||||
Sbjct 1250 AG-TATATGGTTCTGGGACTGGAAGAGTGGTCACAGTTTCCAGCAGTCAGAAACTATTGT 1308
Query 1326 ACAGCCTGGTTCGCTGGAGAGTGAAGCAGGTATATATGCAGCGTGTTACGATCAGACGGG 1385
|||||||||||| |||||||||||||| ||||||||||| || ||||||||| | || ||
Sbjct 1309 ACAGCCTGGTTCACTGGAGAGTGAAGCGGGTATATATGCCGCATGTTACGATAACACAGG 1368
Query 1386 TTCAAGGCTGGTAACGTGTGAGGGAGACAAAACAATAAAGATGTGGAAGGAAGACGAGGA 1445
||| || ||||||| || |||| || || || |||||||||||||| ||||| ||| |
Sbjct 1369 TTCGAGATTGGTAACATGCGAGGCCGATAAGACGATAAAGATGTGGAAAGAAGATGAGAA 1428
Query 1446 TGCAACTCCTGAAACTCATCCTCTCAACTTCAAACCTCCCAAAG-AGATCAGACGCTTCT 1504
||||||||| |||||||||||| |||| |||||||| || |||| | || || |||||||
Sbjct 1429 TGCAACTCCAGAAACTCATCCTATCAATTTCAAACCACC-AAAGGATATTAGGCGCTTCT 1487
> Ahg895990 jgi|Araly1|895990|Al_scaffold_0006_3986
Length=477
Score = 494 bits (267), Expect = 1e-138
Identities = 410/477 (86%), Gaps = 17/477 (4%)
Strand=Plus/Plus
Query 721 GCTGTAAGCAATAGACATACCTATATGTTTTCTGCTGGTGATGACAAGCAAGTCAAATGC 780
||||||||||| || |||||||||||||| ||| |||| |||||||||||||||||||||
Sbjct 7 GCTGTAAGCAACAGGCATACCTATATGTTCTCTTCTGGCGATGACAAGCAAGTCAAATGC 66
Query 781 TGGGACCTTGAGCAGAATAAGGTTATTCGATCTTATCATGGTCATTTGCATGGCGTTTAC 840
|||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct 67 TGGGACCTTGAGCAGAATAAGGTTATCCGATCTTATCATGGTCATTTGCATGGTGTCTAC 126
Query 841 TGTTTAGCTCTTCATCCTACTCTTGATGTTGTACTAACCGGAGGGCGAGACTCTGTCTGC 900
|||||||||||||||| ||| | || ||| |||||||| ||||||||||||||||||||
Sbjct 127 TGTTTAGCTCTTCATCAAACTGTAGACGTTTTACTAACCAGAGGGCGAGACTCTGTCTGC 186
Query 901 AGGGTATGGGATATCCGTACGAAGATGCAAATTTTTGTACTCCC---ACATGACA-GCGA 956
||||||||||||||||||||||||||| ||||||||| ||| |||||||| | ||
Sbjct 187 AGGGTATGGGATATCCGTACGAAGATGAAAATTTTTGCGCTCTTGGGACATGACAAG-GA 245
Query 957 TGTTTTTTCCGTTTTGGCCCGCCCAACTGATCCACAAGTTATTACAGGGTCTCATGACTC 1016
||| | |||||| | |||| |||| || |||||||||||||| || |||||||| ||
Sbjct 246 TGTCTGCTCCGTTGTCTCCCGTGCAACAGACCCACAAGTTATTACCGGATCTCATGATTC 305
Query 1017 AACCATCAAATTTTGGGACCTCCGATATGGCAAATCGATGGCAAC-CATAACGA-ATCAT 1074
|||||| | ||||||||||||||||||| | || | ||| |||| | |||| | ||| |
Sbjct 306 AACCATTAGATTTTGGGACCTCCGATATAG-AA--CAATGACAACAC-TAAC-ACATCTT 360
Query 1075 AAGAA-GACTGTCCGAGCAATGGCTCTCCATCCGAAAGAGAATGATTTTGTTTCTGCATC 1133
||||| | ||||||||| |||||||||||||| |||| | | || ||| ||||||||||
Sbjct 361 AAGAAAG-CTGTCCGAGAAATGGCTCTCCATCTGAAA-A-A-TGCTTTCGTTTCTGCATT 416
Query 1134 AGCTGACAACATCAAGAAGTTTAGCCTTCCTAAGGGAGAGTTTTGCCACAACATGCT 1190
|||||||| | |||||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct 417 GGCTGACAATACCAAGAAATTTAGACTTTCTAAGGGAGAGTTTTGCCACAACATGCT 473
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64677236010
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5