BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G16950.2
Length=2137
Score E
Sequences producing significant alignments: (Bits) Value
Ahg479163 jgi|Araly1|479163|fgenesh2_kg.3__1864__AT3G16950.2 3249 0.0
Ahg946663 jgi|Araly1|946663|scaffold_702892.1 1862 0.0
> Ahg479163 jgi|Araly1|479163|fgenesh2_kg.3__1864__AT3G16950.2
Length=2065
Score = 3249 bits (1759), Expect = 0.0
Identities = 1980/2084 (95%), Gaps = 26/2084 (1%)
Strand=Plus/Plus
Query 28 GGGCTTTGAAAACTCCGCCTCCGTTTGTTGGCTATTTACACTCACTCTGTCTCCGCCGGT 87
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2 GGGCTTTGAAATCTCCGCCTCCG-TTGTTGGCTATTTACACTCACTCTGTCTCCGCCGGT 60
Query 88 AGATTTGTCAGCTGCGTCTTCCTC-GTTTtctctctctctgtctgtgtctct-TAGAATG 145
||||| ||| |||| |||||||| ||| ||||||||||||||| ||||| | || ||||
Sbjct 61 TGATTTCTCATCTGCTTCTTCCTCTGTTCTCTCTCTCTCTGTCTCTGTCT-TATACAATG 119
Query 146 CAATCAGCTATGGCGCTTTCGTTCTCCCAGACGTCGTTTACAAGACCAAACCACGTG-CT 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 120 CAATCAGCTATGGCGCTTTCGTTCTCCCAGACGTCGTTTACAAGACCAAACCACG-GACT 178
Query 205 CGGATCATCTGGTTCTGTTTTCTCTACGCCCAGAAGTCTCCGGTTCTGCGGACTCCGGCG 264
|||||| ||||||| ||||| |||||||| | |||||||||||||||||||||||||||
Sbjct 179 TGGATCAACTGGTTCCGTTTTTTCTACGCCTACAAGTCTCCGGTTCTGCGGACTCCGGCG 238
Query 265 GGAAGCGTTTGGTTTCTCAACGTCGAATCAGTTGGCTATTCG--CAGT-AACCGAATCCA 321
|||||||||||||||||| ||||||||||||||||| || | |||| || ||||| |
Sbjct 239 GGAAGCGTTTGGTTTCTCTCCGTCGAATCAGTTGGCT-TT-GAACAGTGAA-CGAATTCG 295
Query 322 ATTTCTAAGTAGGAAGTCATTCCAAGTCTCCGCTTCTGCTTCAAGTAATGGTAATGGCGC 381
||||| ||||||||| |||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 296 ATTTCCAAGTAGGAAATCATTCCAAGTCTCCGCTTCTGCTTCGAGTAATGGTAACGGCGC 355
Query 382 TCCACCGAAATCTTTCGATTACGATTTGATCATCATCGGAGCTGGAGTTGGTGGCCACGG 441
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 TCCGCCTAAATCTTTCGATTACGATTTGATCATCATCGGAGCTGGAGTTGGTGGCCACGG 415
Query 442 AGCTGCTTTGCACGCCGTTGAAAAGGGACTTAAAACAGCCATTATTGAAGGAGATGTTGT 501
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 416 AGCTGCTTTGCACGCCGTTGAAAAGGGACTTAAAACTGCCATTATAGAAGGAGATGTTGT 475
Query 502 TGGAGGGACTTGTGTTAACAGAGGATGTGTGCCTTCTAAAGCTCTTCTTGCTGTTAGTGG 561
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 476 TGGAGGGACTTGTGTTAACAGAGGATGTGTACCTTCCAAAGCTCTTCTTGCTGTTAGTGG 535
Query 562 TCGAATGCGGGAACTTCAGAACGAACATCACATGAAGTCCTTTGGTCTCCAGGTTTCAGC 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 TCGAATGCGGGAACTTCAGAACGAACATCACATGAAGTCCTTTGGTCTCCAGGTTTCAGC 595
Query 622 TGCTGGATATGATCGTCAGGGTGTGGCAGATCATGCTAATAATCTGGCTACCAAAATACG 681
|||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 596 TGCTGGGTATGATCGTCAGGGTGTGGCAGACCATGCTAATAACCTGGCTACCAAAATACG 655
Query 682 AAACAATCTGACCAATTCAATGAAGGCAATTGGTGTTGACATATTGACTGGATTTGGCAG 741
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 656 AAACAATCTGACCAATTCAATGAAGGCACTTGGTGTTGACATATTGACTGGATTTGGCAG 715
Query 742 TGTTCTGGGTCCACAAAAGGTTAAATATGGGAAGGACAATATTATTACTGCAAAAGATAT 801
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 716 TGTTCTGGGTCCACAAAAGGTTAAATATGGGAAGGACAATATTATCACTGCAAAAGATAT 775
Query 802 AATCATTGCCACTGGATCTGTGCCGTTTGTCCCTAAAGGAATTGAAGTTGATGGAAAGAC 861
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 776 AATCATTGCCACTGGATCTGTGCCGTTTGTCCCTAAAGGCATTGAAGTTGATGGAAAGAC 835
Query 862 TGTGATCACCAGTGACCATGCTTTGAAATTAGAGTCTGTCCCTGAGTGGATTGCAATTGT 921
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 836 TGTAATCACCAGTGACCATGCTTTGAAATTGGAGTCTGTCCCTGAGTGGATTGCAATTGT 895
Query 922 AGGAAGTGGTTATATTGGTCTTGAGTTCAGTGATGTTTACACAGCTCTTGGAAGTGAGGT 981
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 896 AGGAAGTGGTTATATTGGTCTTGAGTTCAGTGATGTTTACACAGCACTTGGAAGTGAGGT 955
Query 982 AACTTTTATAGAAGCACTGGATCAGCTAATGCCTGGATTTGATCCTGAGATCAGTAAGCT 1041
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 956 AACTTTTATTGAAGCACTGGATCAGCTAATGCCTGGATTTGATCCTGAAATCAGTAAGCT 1015
Query 1042 AGCTCAGAGGGTTTTGATAAATCCAAGAAAGATTGACTATCATACTGGAGTCTTTGCAAG 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 AGCTCAGAGGGTTTTGATAAATCCAAGAAAGATTGACTATCATACTGGAGTCTTTGCAAG 1075
Query 1102 CAAAATTACTCCGGCAAGGGATGGGAAACCAGTTCTGATTGAGCTTATTGATGCCAAAAC 1161
|||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 1076 CAAAATTACTCCAGCAAAGGATGGGAAACCAGTTTTGATTGAGCTTATTGATGCCAAAAC 1135
Query 1162 CAAGGAACCTAAGGATACTTTGGAGGTAGATGCTGCTCTTATTGCTACTGGGAGAGCTCC 1221
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1136 CAAGGAACCTAAGGATACCTTGGAGGTAGATGCTGCTCTTATTGCTACTGGAAGAGCTCC 1195
Query 1222 ATTCACCAATGGACTTGGCTTGGAAAATGTCAATGTTGTGACGCAGAGAGGTTTCATACC 1281
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1196 ATTCACCAATGGACTTGGCTTGGAAAATGTCAATGTCGTGACACAGAGAGGTTTCATACC 1255
Query 1282 AGTTGATGAGCGAATGCGTGTGATCGATGGAAAGGGGACTCTGGTTCCGAACTTGTACTG 1341
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1256 AGTTGATGAGAGAATGCGTGTGATCGATGGAAATGGGACTCTGGTTCCGAACTTGTACTG 1315
Query 1342 CATTGGTGATGCCAATGGTAAATTGATGCTTGCACATGCAGCCAGTGCCCAAGGAATTTC 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 CATTGGTGATGCCAATGGTAAATTGATGCTTGCACATGCAGCCAGTGCCCAAGGAATTTC 1375
Query 1402 TGTGGTCGAGCAAGTCAGCGGCAGAGATCATGTGCTTAATCATCTTAGCATCCCAGCTGC 1461
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1376 TGTGGTCGAGCAAGTCAGCGATAGAGATCATGTGCTTAATCATCTTAGCATCCCAGCTGC 1435
Query 1462 TTGCTTTACTCATCCTGAAATCAGCATGGTGGGATTAACAGAGCCTCAAGCAAAAGAAAA 1521
|||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||
Sbjct 1436 TTGCTTTACTCATCCTGAAATCAGCATGGTTGGATTGACAGAGCCTCAAGCGAAAGAAAA 1495
Query 1522 AGGCGAGAAGGAAGGATTTAAAGTTAGTGTTGTCAAGACAAGTTTCAAGGCTAACACAAA 1581
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1496 AGGCGAGAAGGAAGGATTTAAAGTTAGTGTTGCCAAGACAAGTTTCAAGGCTAACACAAA 1555
Query 1582 GGCCCTAGCTGAAAATGAAGGAGAAGGAATAGCTAAGATGATATACCGACCTGACAATGG 1641
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 1556 GGCCCTAGCTGAAAATGAAGGAGAAGGAATCGCAAAGATGATATACCGACCTGACAACGG 1615
Query 1642 TGAAATCTTAGGAGTTCATATATTTGGACTGCATGCAGCTGACCTTATCCATGAAGCTTC 1701
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 TGAAATCCTAGGAGTTCATATATTTGGACTGCATGCAGCTGACCTTATCCATGAAGCTTC 1675
Query 1702 TAATGCGATTGCTCTAGGAACGCGTATTCAGGACATAAAATTGGCAGTTCATGCACATCC 1761
||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1676 TAATGCGATCGCTCTAGGAACACGCATTCAGGACATAAAATTGGCAGTTCATGCACATCC 1735
Query 1762 AACACTCTCTGAGGTCCTCGACGAACTGTTCAAAGCAGCCAAGGTTGAAAGTCATGCTAC 1821
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736 AACACTGTCTGAGGTTCTCGACGAACTGTTCAAAGCAGCCAAGGTTGAAAGTCATGCTAC 1795
Query 1822 GACAAGGACAGGAGATGCAAAGATAAAGCTAAACACGAACCAGGAAGATCGAAAAGGAAG 1881
|||||||||||||||||||||||||||||||||||||||||||||||||| | | | |
Sbjct 1796 GACAAGGACAGGAGATGCAAAGATAAAGCTAAACACGAACCAGGAAGATC-A---G-A-G 1849
Query 1882 AAGAAGAGGAGGAGATGATGAGAAACAACCTTCCGTAAGTAAAGACTTGAAAGATATATC 1941
| | |||||| | ||||| |||||||||||| |||||||||||||| |||||||||||
Sbjct 1850 A-G--GAGGAG-A--TGATGGGAAACAACCTTCAGTAAGTAAAGACTTAAAAGATATATC 1903
Query 1942 TACAAGGCCTTCTTCTTTCTTTGAGAATATTTCTGTTGGAGTCTTGTCTCTGCTTTCACT 2001
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1904 TACAAAGCCTTCTTCTTTCTTTGAGAATATTTATGTTGGAGTCTTGTCTCTGCTTTCACG 1963
Query 2002 TATATTTGTTTAATTGTTCCATGGTTTCAATTAGTGGAGATTGTGGTTTTGGTTATTGTA 2061
|||||||||||||||| ||||||||||| |||||||||||||||| || || || |||||
Sbjct 1964 TATATTTGTTTAATTGGTCCATGGTTTCGATTAGTGGAGATTGTGCTTCTGATTTTTGTA 2023
Query 2062 TGTTTGTTTGATGTGAACGATTTTGGATGATTCTTCTCTTTTTA 2105
||||||||||| |||| ||||||||| |||| |||||||||||
Sbjct 2024 TGTTTGTTTGAAGTGA--GATTTTGGAAGATTATTCTCTTTTTA 2065
> Ahg946663 jgi|Araly1|946663|scaffold_702892.1
Length=1752
Score = 1862 bits (1008), Expect = 0.0
Identities = 1411/1604 (88%), Gaps = 34/1604 (2%)
Strand=Plus/Plus
Query 224 TTCT-CTACGCCCAGAAGTCTCCGGTTCTGCGGACTCCGGCGGGAAGCGTTTGGTTTCTC 282
|||| ||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||
Sbjct 109 TTCTACTACGCCGAGAAATCTCCGGTTCTGTGGACTCCGGCGAGAAGCGTTTGGTTTCTC 168
Query 283 AACGTCGAATCAGTTGGCTATTCGCAGTAACCGAATCCAATTTCTA-AGTAGGAAGTCAT 341
||||||| |||||| | | |||| | |||| | ||| ||| | |||||| || |
Sbjct 169 TCCGTCGAAGCAGTTGAC-A-TCGC-G---CCGATTTCAAATTC-AGAGTAGG-AG--AA 218
Query 342 TCCAAGTCTCCGCTTCTGCTTC-AAGT--AATGGTAATGGCGCTCCACCGAAATCTTTCG 398
|| |||||||||| ||||||| | ||| ||||| |||||| ||||||| ||||
Sbjct 219 TCGAAGTCTCCGCCGCTGCTTCTTCTTCCGCTGGAAATGGAGCTCCATCGAAATCGTTCG 278
Query 399 ATTACGATTTGATCATCATCGGAGCTGGAGTTGGTGGCCACGGAGCTGCTTTGCACGCCG 458
|||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 279 ATTATGATTTGATCATTATCGGAGCTGGAGTTGGTGGCCATGGAGCTGCATTGCACGCCG 338
Query 459 TTGAAAAGGGACTTAAAACAGCCATTATTGAAGGAGATGTTGTTGGAGGGACTTGTGTTA 518
| || |||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||
Sbjct 339 TCGAGAAGGGACTCAAAACTGCCATCATTGAAGGAGATGTTGTTGGAGGGACTTGCGTTA 398
Query 519 ACAGAGGATGTGTGCCTTCTAAAGCTCTTCTTGCTGTTAGTGGTCGAATGCGGGAACTTC 578
| ||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||||||
Sbjct 399 ATAGAGGCTGTGTGCCTTCAAAAGCTCTCCTTGCTGTTAGTGGTAGAATGCGGGAACTTC 458
Query 579 AGAACGAACATCACATGAAGTCCTTTGGTCTCCAGGTTTCAGCTGCTGGATATGATCGTC 638
|||||||||||||||||||| | |||||| | ||| |||||||||| || ||||| ||||
Sbjct 459 AGAACGAACATCACATGAAGGCTTTTGGTTTGCAGATTTCAGCTGCCGGTTATGACCGTC 518
Query 639 AGGGTGTGGCAGATCATGCTAATAATCTGGCTACCAAAAT-ACGAAACAATCTGACCAAT 697
|||||||||| || ||||| | |||||||||||||||||| | ||| |||||| ||||||
Sbjct 519 AGGGTGTGGCTGACCATGCGAGTAATCTGGCTACCAAAATTAGGAA-CAATCTCACCAAT 577
Query 698 TCAATGAAGGCAATTGGTGTTGACATATTGACTGGATTTGGCAG-TGTTCTGGGTCCACA 756
|||||||||||| ||||||||||||||||||| || ||||| | ||| |||||||||||
Sbjct 578 TCAATGAAGGCACTTGGTGTTGACATATTGACAGGGTTTGGG-GCTGTCCTGGGTCCACA 636
Query 757 AAAGGTTAAATATGGGAAGGACAATATTATTACTGCAAAAGATATAATCATTGCCACTGG 816
||||||||||||||| | |||||||||| |||| ||||||||||||||| || |||||
Sbjct 637 AAAGGTTAAATATGGT--G-ACAATATTATCACTGGAAAAGATATAATCATCGCAACTGG 693
Query 817 ATCTGTGCCGTTTGTCCCTAAAGGAATTGAAGTTGATGGAAAGACTGTGATCACCAGTGA 876
|||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||
Sbjct 694 ATCTGTACCGTTTGTCCCAAAAGGAATTGAAGTTGATGGAAAGACTGTTATCACAAGTGA 753
Query 877 CCATGCTTTGAAATTAGAGTCTGTCCCTGAGTGGATTGCAATTGTAGGAAGTGGTTATAT 936
||||| |||||||| ||||| || ||||| |||||||| || |||||||||||||||||
Sbjct 754 TCATGCATTGAAATTGGAGTCCGTTCCTGACTGGATTGCGATAGTAGGAAGTGGTTATAT 813
Query 937 TGGTCTTGAGTTCAGTGATGTTTACACAGCTCTTGGAAGTGAGGTAACTTTTATAGAAGC 996
|||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||
Sbjct 814 CGGTCTTGAGTTCAGTGATGTTTACACGGCCCTTGGAAGTGAGGTAACTTTTATTGAGGC 873
Query 997 ACTGGATCAGCTAATGCCTGGATTTGATCCTGAGATCAGTAAGCTAGCTCAGAGGGTTTT 1056
|||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |
Sbjct 874 TCTGGATCAGCTAATGCCTGGGTTTGATCCTGAGATCAGTAAGCTGGCTCAAAGGGTTCT 933
Query 1057 GATAAATCCAAGAAAGATTGACTATCATACTGGAGTCTTTGCAAGCAAAATTACTCCGGC 1116
|||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct 934 AATAAATCCAAGAAAAATTGACTATCATACTGGAGTGTTTGCAAGCAAAATCACTCCAGC 993
Query 1117 AAGGGATGGGAAACCAGTTCTGATTGAGCTTATTGATGCCAAAACCAAGGAACCTAAGGA 1176
|| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct 994 AAAGGATGGGAAACCAGTGATGATTGAGCTAATTGATGCCAAAACCAAGGAACCCAAGGA 1053
Query 1177 TACTTTGGAGGTAGATGCTGCTCTTA-TTGCTACTGGGAGAGCTCCATTCACCAATGGAC 1235
|||||||||||| || |||||| ||| |||||||||| ||||| |||||||||||||| |
Sbjct 1054 TACTTTGGAGGTTGACGCTGCT-TTAATTGCTACTGGAAGAGCGCCATTCACCAATGGTC 1112
Query 1236 TTGG-CTTGGAAAATGTCAATGTTGTGACGCAGAGAGGTTTCATACCAGTTGATGAGCGA 1294
|||| || ||||||| ||||||||||||| || |||||||| ||||||||||||||||||
Sbjct 1113 TTGGACT-GGAAAATATCAATGTTGTGACACAAAGAGGTTTTATACCAGTTGATGAGCGA 1171
Query 1295 ATGCGTGTGATCGATGGAAAGGGGACTCTGGTTCCGAACTTGTACTGCATTGGTGATGCC 1354
|||||||| || |||||||| || | |||||||| ||||||||||||| |||||||||
Sbjct 1172 ATGCGTGTTATTGATGGAAATGGAAAGCTGGTTCCCCACTTGTACTGCATCGGTGATGCC 1231
Query 1355 AATGGTAAATTGATGCTTGCACATGCAGCCAGTGCCCAAGGAATTTCTGTGGTCGAGCAA 1414
|| |||||| |||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct 1232 AACGGTAAAATGATGCTTGCTCATGCAGCTAGTGCCCAAGGAATTTCTGTGGTGGAGCAA 1291
Query 1415 GTCAGC-GGCAGAGATCATGTGCTTAATCATCTTAGCATCCCAGCTGCTTGCTTTACTCA 1473
|||| | || |||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 1292 GTCA-CAGGTAGAGATCATGTGCTTAATCATCATAGCATCCCAGCTGCTTGTTTTACTCA 1350
Query 1474 TCCTGAAATCAGCATGGTGGGATTAACAGAGCCTCAAGCAAAAGAAAAAGGC-GAGAAGG 1532
|||||||||||| ||||||||||| |||||||||||||||| ||| |||| | ||||| |
Sbjct 1351 TCCTGAAATCAGTATGGTGGGATTGACAGAGCCTCAAGCAAGAGAGAAAG-CTGAGAAAG 1409
Query 1533 AAGGATTTAAAGTTAGTGTTGTCAAGACAAGTTTCAAGGCTAACACAAAGGCCCTAGCTG 1592
| ||||| ||||| ||| | | |||||||||||||||||| || |||||||||||||| |
Sbjct 1410 AGGGATTCAAAGTAAGTATCGCCAAGACAAGTTTCAAGGCAAATACAAAGGCCCTAGCCG 1469
Query 1593 AAAATGAAGGAGAAGGAATAGCTAAGATGATATACCGACCTGACAATGGTGAAATC-TTA 1651
||||||||||||||||| | ||||||||||||||| |||||||||||||||||||| ||
Sbjct 1470 AAAATGAAGGAGAAGGACTCGCTAAGATGATATACAGACCTGACAATGGTGAAATCCTT- 1528
Query 1652 GGAGTTCATATATTTGGACTGCATGCAGCTGACCTTATCCATGAAGCTTCTAATGCGATT 1711
||||||||||| ||||| ||||||| ||||| |||||||| ||||| || || ||||||
Sbjct 1529 GGAGTTCATATCTTTGGGTTGCATGCTGCTGATCTTATCCACGAAGCATCCAACGCGATT 1588
Query 1712 GCTCTAGGAACGCGTATTCAGGACATAAAA-TTGGCAGTTCATGCACATCCAACACTCTC 1770
||| ||||||| || ||||||||||||||| ||| | |||||||||||||||||||| ||
Sbjct 1589 GCTTTAGGAACACGCATTCAGGACATAAAACTTG-CTGTTCATGCACATCCAACACTGTC 1647
Query 1771 TGAGGTCCTCGACGAACTGTTCAAAGCAGCCAAGGTTGAAAGTC 1814
||| || | ||||||||||| |||||||||||||| || ||||
Sbjct 1648 TGAAGTTGTAGACGAACTGTTTAAAGCAGCCAAGGTCGATAGTC 1691
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80408507195
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5