BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G17700.1
Length=2556
Score E
Sequences producing significant alignments: (Bits) Value
Ahg929630 jgi|Araly1|929630|scaffold_302087.1 3901 0.0
Ahg341904 jgi|Araly1|341904|fgenesh1_pg.C_scaffold_3001667 1814 0.0
Ahg929632 jgi|Araly1|929632|scaffold_302089.1 1535 0.0
> Ahg929630 jgi|Araly1|929630|scaffold_302087.1
Length=2348
Score = 3901 bits (2112), Expect = 0.0
Identities = 2272/2349 (97%), Gaps = 11/2349 (0%)
Strand=Plus/Plus
Query 136 GAAACCGTGATTTTGGTCAAGAAATGGCTTCCCACAACGAAAACGATGATATTCCCATGC 195
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GAAACCTTGATTTTGGTCAAGAAATGGCTTCCCACAACGAAAACGATGATATTCCCATGC 60
Query 196 TTCCGATTTCAGACCCATCATCTCGTACTAGAGCCAGAGCTTTCACTTCCAGGAGTCGTA 255
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTCCAATTTCAGACCCATCATCTCGTACTAGAGCCAGAGCTTTCACTTCCAGGAGTCGTA 120
Query 256 GCGTTTCTCTCTCAAACCCTACTTCCTCCATTGAAGGATTTGACACTTCCACTGTGGTTT 315
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 121 GCGTTTCTCTCTCAAACCCTACTTCCTCCATTGAAGGATTTGACAATTCCACTGTGGTTT 180
Query 316 TAGGCTACACGGGTCCTCTTCGAACTCAGAGACGTCCTCCTTTAGTTCAAATGAGTGGTC 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TAGGCTACACGGGTCCTCTTCGAACTCAGAGACGTCCTCCTTTAGTTCAAATGAGTGGTC 240
Query 376 CTCTTACCTCTACTCGCAAGCATGAACCTCTCTTTCTTCCTCA----TC--C---TTCTT 426
||||||||||||||||||| | ||||||||||||||||||||| || | |||||
Sbjct 241 CTCTTACCTCTACTCGCAAACCTGAACCTCTCTTTCTTCCTCATCCGTCTTCTGGTTCTT 300
Query 427 CTGATTCCGTTGGTGTCTCTTCTCAGCCTGAGAGGTATCCTTCTTTTGCTGCTCTTGAAC 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CTGATTCCGTTGGTGTCTCTTCTCAGCCTGAGAGGTATCCTTCTTTTGCTGCTCTTGAAC 360
Query 487 ATAAAAACTCCTCAGAGGATGAGTTCGTTTTGAAACACGCAAATCTCTTGAGGTCTGGAC 546
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 ATAAAAACTCCTCAGACGATGAGTTCGTTTTGAAACACGCAAATCTCTTGAGGTCTGGAC 420
Query 547 AATT-GGGAATGTGTAATGATCCTTACTGTACTACTTGCCCTTCTTACTACAACCGTAAG 605
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 AATTAGGG-ATGTGTAATGATCCTTACTGTACTACTTGCCCTTCTTACTACAACCGTAAG 479
Query 606 GCTGCTCAAATCCCTACTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAACGCT 665
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 480 GCTGCTCAAATCCCTACTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAATGCT 539
Query 666 CTGTATGATGATGCTAAAGGTTGGGCAAGGAGATTTGCTTCCTCTGTTAATAGATACTTA 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 CTGTATGATGATGCTAAAGGTTGGGCAAGGAGATTTGCTTCCTCTGTTAATAGATACTTA 599
Query 726 CCTGGAATCATGAATCCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTT 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CCTGGAATCATGAATCCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTT 659
Query 786 TCATGCTTGTTAGCTATTTTTATAGATCCCCTCTTCTTCTTCCTCATAAAAGTCCAAGAG 845
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 660 TCATGCTTGTTAGCTATTTTTATAGATCCTCTCTTCTTCTTCCTCATAAAAGTCCAAGAG 719
Query 846 CAAAACAAATGTATTATGATTGATTGGCCGATGACTAAAGCATTTGTAGCTGTAAGAAGT 905
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 720 CAAAACAAATGCATTATGATTGATTGGCCGATGACTAAAGCATTTGTAGCTGTTAGAAGT 779
Query 906 GTAACAGATGTTATATTCACTATGAACATTCTACTTCAGTTCCGATTGGCCTATGTAGCT 965
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 780 GTAACAGATGTTATATTCACTATGAACATTCTGCTTCAGTTCCGATTGGCCTACGTAGCT 839
Query 966 CGTGAGTCTACGGTAGTTGGAGCTGGCCAGTTAGTTAGTCATCCCaaaaaaaTTGCCCTT 1025
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 840 CGTGAGTCTACGGTAGTTGGTGCTGGCCAGTTAGTTAGTCATCCCAAAAAAATTGCCCTT 899
Query 1026 CATTACCTCAAAGGAAAGTTTTTCCTTGACTTGTTCATAGTGATGCCACTTCCACAGATA 1085
|||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 CATTACTTTAGAGGAAAGTTTTTCCTTGACTTGTTCATAGTGATGCCACTTCCACAGATA 959
Query 1086 TTGATACTATGGATAATACCAGCACATTTGGGTGCATCCGGGGCAAACTATGCGAAAAAC 1145
||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 960 TTGATTTTATGGATAATACCAGAACATTTGGGTGCATCCGGGGCAAACTATGCGAAAAAC 1019
Query 1146 CTTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTCTACCGTTT 1205
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1020 CTTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTCTACCATTT 1079
Query 1206 CTTGCTGGACAAACACCTACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATT 1265
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 CTTGCTGGACAAACACCGACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATT 1139
Query 1266 AATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGTTCTTGCTGGTATCTATTTGGT 1325
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1140 AATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGCTCTTGCTGGTATCTTTTTGGT 1199
Query 1326 CTGCAGAGAGTTAATCAGTGCCTTCGAAATGCTTGCGGTAATTTTGGGCGTGAATGTCAA 1385
||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 1200 CTGCAGAGAGTTAATCAATGCCTTCGAAATGCTTGCGGTAATTTTGAGCGTGAATGTCAT 1259
Query 1386 GATCTTATAGATTGTGGTAATGGAAATAGCAGTGTATTAGTACGAGCTACCTGGAAAGAT 1445
||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||
Sbjct 1260 GATCTTATAGATTGTGGTAATGGAATTAGCACTGTGTTAGTACGAGCTACCTGGAGAGAT 1319
Query 1446 AATGCGAGTGCCAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATCTATTTAAAA 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 AATGCGAGTGCCAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATCTATTTAAAA 1379
Query 1506 GCAGTCAATCTTACCAATCATTCTAATCTCTTCACAAGATACAGTTACTCTCTCTTCTGG 1565
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1380 GCAGTCAATCTAACCAATCATTCTAGTCTCTTCACAAGATACAGTTACTCTCTCTTCTGG 1439
Query 1566 GGCTTCCAGCAAATCAGCACTCTTGCTGGCAACCAAGTCCCAAGCTACTTTCTAGGGGAG 1625
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1440 GGCTTCCAGCAAATCAGCACTCTTGCTGGAAACCAAGTCCCAAGCTACTTTCTAGGGGAG 1499
Query 1626 GTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTACTTTTTGCGCTTCTTATTGGT 1685
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1500 GTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTGCTTTTTGCGCTTCTTATTGGT 1559
Query 1686 AATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGG 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1560 AATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTAAGACGG 1619
Query 1746 CGTGATGTGGAGCAATGGATGAGCCATAGACGGTTGCCAGATGGTATAAGAAGGAGGGTG 1805
||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1620 CGTGATGTGGAACAATGGATGAGCCATAGACGGTTGCCAGATGGTATAAGAAAGAGGGTG 1679
Query 1806 CGAGAGGCTGAGCGGTTTAACTGGGCTGCTACTAGAGGCGTTAACGAAGAATTGCTTTTT 1865
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1680 CGAGAGGCTGAGCGGTTCAACTGGGCTGCTACTAGAGGCGTTAACGAAGAATTGCTCTTT 1739
Query 1866 GAGAATATGCCTGATGATCTTCAAAGAGATATAAGACGACACCTCTTCAAATTTCTCAAG 1925
|| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1740 GAAAATATGCCTGATGATCTCCAAAGAGATATAAGACGACACCTCTTTAAATTTCTCAAG 1799
Query 1926 AAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAGATGCAATCCGTGAGAGGCTG 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1800 AAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAGATGCAATCCGTGAGAGGCTG 1859
Query 1986 AAACAGAGGACATACATAGGGAGTAGCACAGTGTTGCACCGTGGAGGACTAGTTGAGAAA 2045
|||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1860 AAACAGAGGACATATATAGGGAGTAGCACAGTGTTGCACCGCGGAGGTCTAGTTGAGAAA 1919
Query 2046 ATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAGATGGTTCTGTTCTTCCA 2105
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1920 ATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAGACGGTTCTGTTCTTCCT 1979
Query 2106 TTATATGAAGGCGATGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCT 2165
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1980 TTATATGAAGGAGACGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCT 2039
Query 2166 GTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAGGGATTGCTTAGTAGCAGAAAT 2225
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 2040 GTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAGGGATTGCTTAGCAACAGAAAT 2099
Query 2226 GTAAGGTGTGTGACAAATGTGGAGGCGTTTTCGCTGAGTGTAGCCGATCTGGAAGACGTA 2285
|| ||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||
Sbjct 2100 GTTAGGTGTGTGACAAATGTGGAGGCATTTTCGCTGAGTGTGGCAGATCTTGAAGACGTA 2159
Query 2286 ACGAGCTTGTTTTCGAGATTCTTGAGGAGTCATAGAGTCCAAGGAGCCATAAGGTACGAC 2345
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2160 ACAAGCTTGTTCTCGAGATTCTTGAGGAGTCATAGAGTCCAAGGAGCCATAAGGTACGAC 2219
Query 2346 TCTCCATATTGGAGGCTACGAGCGGCTAGGCAGATTCAAGTGGCGTGGAGATACCGTAGG 2405
||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||
Sbjct 2220 TCTCCATATTGGAGGCTACAAGCTGCTAGGCAGATTCAAGTGGCGTGGAGATATCGTAGG 2279
Query 2406 AGACGGCTTCATAGATTATGCACTCCTCAGTCTAGTTATAGCCTTTAGTTTGTATTCTTC 2465
||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| ||
Sbjct 2280 AGACGGCTTCAGAGATTATGTACTCCTCAGTCTAGTTACAGCCTTTAGTTTGTATTCCTC 2339
Query 2466 ATTCTTGAT 2474
||| |||||
Sbjct 2340 ATTTTTGAT 2348
> Ahg341904 jgi|Araly1|341904|fgenesh1_pg.C_scaffold_3001667
Length=2262
Score = 1814 bits (982), Expect = 0.0
Identities = 1661/1979 (84%), Gaps = 86/1979 (4%)
Strand=Plus/Plus
Query 504 GATGAGTTCGT-TTTGAAACACGCAAATCTCTTGAGGTCTGGACAATT-GGGAATGTGTA 561
||||| || || || ||| |||||||||||||||| |||||||| || ||| ||||| |
Sbjct 319 GATGATTTTGTCTTCCAAA-ACGCAAATCTCTTGAGATCTGGACAGTTAGGG-ATGTGCA 376
Query 562 ATGATCCTTACTGTACTACTTGCCCTTCTTACTACAACCG-TAAGGCTGCTCAA-ATCCC 619
||||||||||||| |||||||||||||||||||||||||| || ||||||||| || |
Sbjct 377 ATGATCCTTACTGCACTACTTGCCCTTCTTACTACAACCGCCAA-GCTGCTCAATTTCAC 435
Query 620 TACTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAAC-GCTCTGTATGATGATG 678
||||| ||||||||| || | | | || || | || | ||||||||||||||
Sbjct 436 -ACTTCCAGAGTTTCT-ACC-TCTAGGTT--TCG---C---ACTGTTCTGTATGATGATG 484
Query 679 CTAAAGGTTGGGC-AAGGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATG 737
||| ||||||||| || | ||||||| ||||||||| ||||| |||||||||||| |||
Sbjct 485 CTAGAGGTTGGGCTAA-GCGATTTGCCTCCTCTGTTCGTAGATGCTTACCTGGAATAATG 543
Query 738 AATCCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTT-GTT 796
||||||||| ||||| |||||| |||||||| | |||| ||| ||||| |||| | |
Sbjct 544 AATCCTCATTCCAAATTCGTTCAAGTCTGGACTAGAGTCTTAGCCTTTTCAAGCTTAG-T 602
Query 797 AGCTATTTTTATAGATCCCCTCTTCTTCTTCCTCATA-AAAGTCCAA-GAGCAAAACAAA 854
|| |||||||||||||| |||||||| |||||| || | ||||| || | ||||||
Sbjct 603 GGCCATTTTTATAGATCCTCTCTTCTTGTTCCTCTTATTTA-TCCAACAAG-ACAACAAA 660
Query 855 TGTATTA-TGATTGATTGGCCGAT--GACTAAAGCATTTGTAG-CTGTAAGAAGTGTAAC 910
|| ||| |||||||||| || | |||||||| ||| || | || | |||||| ||||
Sbjct 661 TG-CTTAGCGATTGATTGG-CG-TGCGACTAAAGTATTGGT-GTCTCTTAGAAGTATAAC 716
Query 911 AGATGTTATATTC-ACTATGAACATTCTACTTCAGTTCCGATTGGCCTATGTAGCTCGTG 969
||| || ||||| || || ||||||||||||||||| | |||||||||||||| | ||
Sbjct 717 GGATCTTGTATTCTAC-ATTAACATTCTACTTCAGTTTAGGTTGGCCTATGTAGCCCCTG 775
Query 970 AGTCTACG-GTAGTTGGAGCTGGCCAGTTAGTTAG-TCATCCCaa-aaaaaTTGCCCTTC 1026
| |||| | ||||||| || |||||||||||| | |||| |||| ||||||||| | |
Sbjct 776 AATCTA-GAATAGTTGGTGCCGGCCAGTTAGTT-GATCAT-CCAAGAAAAATTGCTCGCC 832
Query 1027 ATTACCTCAAAGGAAAGTTTTTCCTTGACT-TGTTCATAGTGAT-GCCACTTCCACAGAT 1084
||||| || ||||||||||||| ||||| | ||||||||||| | ||| ||||||||||
Sbjct 833 ATTACTTCCAAGGAAAGTTTTTTCTTGA-TCTGTTCATAGTGTTACCCA-TTCCACAGAT 890
Query 1085 ATTGATACTATGGATAATACCAGCACATTTGGGTGCATC-CGGGGCAA-ACTATGCGAAA 1142
| ||||| ||||||||||||||||||| ||||| || | | ||| || | |||| ||||
Sbjct 891 AATGATATTATGGATAATACCAGCACACTTGGGCACA-CGCAGGG-AAGAATATGAGAAA 948
Query 1143 AACCTTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTC-TACC 1201
| || |||| ||| | |||||||| ||||||||||||||||||||||||| || ||||
Sbjct 949 CAGATTATACGCGCTACGGTTCTTTTTCAATACATTCCAAAGTTATATAGAC-TCTTACC 1007
Query 1202 GT-TTCTTGCTGGACAAACACCTACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTG 1260
| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct 1008 -TCTTCTTGCTGGACAAACACCGACCGGCTTCATATTTGAGTCAGCCTGGGCTAATTTTG 1066
Query 1261 TTATTAATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGTTCTTGCTGGTATCTAT 1320
|||||||||||||||| |||||||||||||| || | |||||| |||||||||||||| |
Sbjct 1067 TTATTAATCTTCTCACCTTCATGCTTGCTGGTCACGCTGTTGGCTCTTGCTGGTATCT-T 1125
Query 1321 T-TGGTCTGCAGAGAGTTAATCAGTGCCTTC-GAAATGCTTGCGGTA-ATTT-TG-GGCG 1375
| |||||||||||||||||| | ||| | | | ||||||| || | |||| || ||
Sbjct 1126 TCTGGTCTGCAGAGAGTTAAGAAATGCATGCTG-AATGCTT--GGAATATTTCTGTGG-A 1181
Query 1376 TGAATGTCA-AGATCTTATAGATTG-TGGTAATGGAA-ATA-GCAGT--GTA-TTAGTAC 1428
|||| || | | ||||||| ||||| | | ||||| || ||| | | | | | ||
Sbjct 1182 TGAACGT-AGAAATCTTATCGATTGTTCG-CGTGGAAGTTATGCA-TCCG-AGTCACAAC 1237
Query 1429 GAGCTAC-CTGGAAAGATAATGCGAGTGCCAATGCTTGTTTCCAAGAAGA-TGGTTTTCC 1486
||||| | ||||| |||| ||| |||| |||||||||||| |||| ||| ||||||| |
Sbjct 1238 GAGCT-CTCTGGAGAGATGGTGCTAGTGTCAATGCTTGTTTTCAAG-AGAGTGGTTTTAC 1295
Query 1487 TTATGGAATCTATTTAAAAGCAGTCAATCTTACCAATCATTCTAATCTCTTCACAAGATA 1546
|||||| |||||| | || ||||| |||||||||||||| |||| | |||||||||||||
Sbjct 1296 TTATGGGATCTATCTGAAGGCAGTGAATCTTACCAATCAATCTAGTTTCTTCACAAGATA 1355
Query 1547 CAGTTACTCTCTCTTCTGGGGCTTCCAGCAAATCAGCACTCTTGCTGGCAACCAAGT-CC 1605
|||||| ||||| || ||||| ||||| ||||| ||||| |||||||| ||| | | ||
Sbjct 1356 CAGTTATTCTCTGTTTTGGGGATTCCAACAAATAAGCACACTTGCTGGAAACTTA-TCCC 1414
Query 1606 CAAGCTACTTTCTAGGGGAGGTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTAC 1665
|||| |||| | |||||||| |||||||| |||||||||||||||||||||||||| |
Sbjct 1415 CAAGTTACTCAGTGGGGGAGGTTTTCTTTACAATGGGTATCATTGGACTAGGGCTTTTGC 1474
Query 1666 TTTTTGCGCTTCTTATTGGTAATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATT 1725
|||||| || ||||| ||||||||||| || ||||||||| |||||| | ||||
Sbjct 1475 TTTTTGTGCGGCTTATCGGTAATATGCAGAACTTCCTTCAATCTCTTGATCGGAGGAGGA 1534
Query 1726 TGGAAATGACGCTGAGACGGCGTGATGTGGAGCAATGGATGAGCCATAGACGGTTGCCAG 1785
||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||
Sbjct 1535 TGGAAATGATGCTGAGACGGCGTGATGTAGAGCAGTGGATGAGCCATAGACTGTTGCCAG 1594
Query 1786 ATGGTATAAGAAGGAGGGTGCGAGAGGCTGAGCGGTTTAACTGGGCTGCTACTAGAGGCG 1845
| | |||||||| || ||||| ||||||||||||| || |||||||| |||||||| |
Sbjct 1595 AAGATATAAGAAAAAGAGTGCGCGAGGCTGAGCGGTACAATTGGGCTGCGACTAGAGGAG 1654
Query 1846 TTAACGAAGAATTGCTTTTTGAGAATATGCCTGATGATCTTCAAAGAGATATAAGACGAC 1905
||||||||||||| || || ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1655 TTAACGAAGAATTTCTATTCGAGAATATGCCTGATGACCTTCAAAGAGATATAAGACGAC 1714
Query 1906 ACCTCTTCAAATTTCTCAAGAAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAG 1965
||||||| |||||||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct 1715 ACCTCTTTAAATTTCTCAAGAAGGTGAGAATATTTTCGTTGATGGATGAATCAGTTTTAG 1774
Query 1966 ATGCAATCCGTGAGAGGCTGAAACAGAGGACATACATAGGGAGTAGCACAGTGTTGCACC 2025
|| |||||||||||||| |||||||||||||||||||| || ||||||| ||||||||||
Sbjct 1775 ATTCAATCCGTGAGAGGTTGAAACAGAGGACATACATAAGGTGTAGCACGGTGTTGCACC 1834
Query 2026 GTGGAGGACTAGTTGAGAAAATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAG 2085
| |||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1835 GCAGAGGTCTAGTAGAAAAAATGGTATTCATAGTGAGAGGTGAGATGGAGAGTATTGGAG 1894
Query 2086 AAGATGGTTCTGTTCTTCCATTAT-ATGAAGGCGATGTTTGTGGTGAAGAACTCCTCACT 2144
|||| |||||| ||||||| |||| | |||||||| ||||||||||||||||||||||||
Sbjct 1895 AAGACGGTTCTATTCTTCCTTTATCA-GAAGGCGACGTTTGTGGTGAAGAACTCCTCACT 1953
Query 2145 TGGTGCCTCGAACGCTCTTCTGTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAG 2204
||||||||||||||||||||| |||||||||||||||| | ||||| ||||||| |||||
Sbjct 1954 TGGTGCCTCGAACGCTCTTCTATAAACCCCGATGGGACTAAGATAAAGATGCCAACAAAG 2013
Query 2205 GGATT-GCTTAGTAGCAGAAATGTAAGGTGTGTGACAAATGTGGAGGCGTTTTCGCTGAG 2263
||||| | |||| | ||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 2014 GGATTAG-TTAGCAACAGAAATGTTAGGTGTGTAACAAATGTGGAGGCGTTTTCGCTGAG 2072
Query 2264 TGTAGCCGATCTGGAAGACGTAACGAGCTTGTTTTCGAGATTCTTGAGGAGTCATAGAGT 2323
|||||| ||||| ||||| ||||| ||||||||||| |||||||| ||||||||| ||||
Sbjct 2073 TGTAGCAGATCTTGAAGATGTAACAAGCTTGTTTTCAAGATTCTTAAGGAGTCATCGAGT 2132
Query 2324 CCAAGGAGCCATAAGGTACGACTCTCCATATTGGAGGCTACGAGCGGCTAGGCAGATTCA 2383
|||||||| ||||||||||| ||||| |||||||| |||| ||| || | |||||||||
Sbjct 2133 GCAAGGAGCTATAAGGTACGAGTCTCCTTATTGGAGACTACAAGCAGCGATGCAGATTCA 2192
Query 2384 AGTGGCGTGGAGATACCGTAGGAGACGGCTTCATAGATTATGCACTCCTCAGTCTAGTT 2442
|||||| ||||||||||| | |||||| ||||| ||||| | |||| ||||||||||||
Sbjct 2193 AGTGGCTTGGAGATACCGAAAGAGACGACTTCAGAGATTTTACACTGCTCAGTCTAGTT 2251
> Ahg929632 jgi|Araly1|929632|scaffold_302089.1
Length=2263
Score = 1535 bits (831), Expect = 0.0
Identities = 1075/1190 (90%), Gaps = 27/1190 (2%)
Strand=Plus/Plus
Query 157 AAATGGCTTCCCACAACGAAAACGATGATATTCC-CATGCTTCCGATTTCAGACCCATCA 215
|||||||||| | |||||||||||| || | ||| | ||||||| ||||||||| |||||
Sbjct 19 AAATGGCTTCACTCAACGAAAACGAGGAGACTCCTC-TGCTTCCAATTTCAGACTCATCA 77
Query 216 TCTCGTACTAGAGCCAGAGCTTTCACTTCCAGGAGTCGTAGCGTTTCTCTCTCAAACCCT 275
||||||||| || || |||||||||||||| ||||| |||||| |||||||||| |
Sbjct 78 TCTCGTACT--AG--TGA--TTTCACTTCCAGGACTCGTACCGTTTCCCTCTCAAACCTT 131
Query 276 ACTTCCTCCATTGAAGGATTTGACACTTCCACTGTGGTTTTAGGCTACACGGGTCCTCTT 335
|||||||| |||| |||||||| | ||| ||||||||||| |||||||| |||||||||
Sbjct 132 TCTTCCTCCGTTGACGGATTTGAAAATTCAACTGTGGTTTTTGGCTACACAGGTCCTCTT 191
Query 336 CGAACTCAGAGACGTCCTCCTTTAGTTCAAATGAGTGGTCCTC-TTACCTCTACTCGCAA 394
||||||| ||||| |||||| ||| ||||| |||||||||||| ||| ||||||| ||||
Sbjct 192 CGAACTCGGAGACATCCTCCGTTACTTCAACTGAGTGGTCCTCTTTA-CTCTACTTGCAA 250
Query 395 GCATGAACCTCTCTTTCTTCCTCATCCTTCTTCTGATTCCGTTGGTGTCTCTTCTCAGCC 454
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 251 ACCTGAACCTCTCTTTCTTCCTCTTCCTTCTTCTGATTCCGTTGGTGTCTCTTCTCAGCC 310
Query 455 TGAGAGGTATCCTTCTTTTGCTGCTCTTGAACATAAAAACTCCTCAGAGGATGAGTTCGT 514
||||||| ||||||||||| |||| |||||||| | ||||||||||| ||||||| | |
Sbjct 311 TGAGAGGGATCCTTCTTTTTCTGCCCTTGAACACGACAACTCCTCAGACGATGAGTCCCT 370
Query 515 TTTGAAACACGCAAATCTCTTGAGG-TCTGGACAATTGGGAATGTGTAATGATCCTTACT 573
||||||| |||||||||||||| || ||||||||||| || || ||||||||||||||||
Sbjct 371 TTTGAAATACGCAAATCTCTTG-GGATCTGGACAATTAGGTATTTGTAATGATCCTTACT 429
Query 574 GTACTACTTGCCCTTCTTACTACAACCGTAAGGCTGCTCAAATCCCTACTTCTAGAGTTT 633
||||||||||||||||| | ||| |||||| | ||||||| ||||||| | |||||||
Sbjct 430 GTACTACTTGCCCTTCTGATTACTTCCGTAAAACAGCTCAAACCCCTACTCCCAGAGTTT 489
Query 634 CTGCCCTTTTTGATTCCACGTTCCATAACGCTCTGTATGATGATGCTAAAGGTTGGGCAA 693
||||| ||||| ||||| |||||||||| |||||||||||||||||||||| |||||| |
Sbjct 490 CTGCCATTTTTTATTCCCCGTTCCATAATGCTCTGTATGATGATGCTAAAGATTGGGCGA 549
Query 694 GGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATGAATCCTCATGCCAAAG 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 GGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATGAATCCTCATGCCAAAG 609
Query 754 AGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTTGTTAGCTATTTTTATAGATC 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 610 AGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTTGTTAGCTATTTTTATAGATC 669
Query 814 CCCTCTTCTTCTTCCTCATAAAAGTCCAAGAGCAAAACAAATGTATTATGATTGATTGGC 873
| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 670 CTCTCTTCTTCTTCCTCATAAAAGTTCAAGAGCAAAACAAATGCATTATGATTGATTGGC 729
Query 874 CGATGACTAAAGCATTTG-TAGCTGT-AAGAAGTGTAACAGATGTTATATTCACTATGAA 931
||||| ||||||| |||| ||||||| || ||||||||||||| ||||| || || ||||
Sbjct 730 CGATGGCTAAAGC-TTTGGTAGCTGTTAA-AAGTGTAACAGATATTATAATCTCTGTGAA 787
Query 932 CATTCTACTTCAGTTCCGATTGGCCTATGTAGCTCGTGAGTCTACGGTAGTTGGAGCTGG 991
|||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 788 CATTCTGCTTCAGTTCCGAATGGCCTATGTAGCTCGTGAGTCTACGGTAGTTGGTGCTGG 847
Query 992 CCAGTTAGTTAGTCATCCCaaaaaaaTTGCCCTTCATTACCTCAAAGGAAAGTTTTTCCT 1051
|||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct 848 CCAGTTAGTTAGTCATCCCAAAAAAATTGCCCTTCATTACTTTAGAGGAAAGTTTTTCCT 907
Query 1052 TGACTTGTTCATAGTGATGCCACTTCCACAGATATTGATACTATGGATAATACCAGCACA 1111
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 908 TGACTTGTTCATAGTGATGCCACTTCCACAGATATTGATATTATGGATAATACCAGAACA 967
Query 1112 TTTGGGTGCATC--------C-GGGGCAAACTATGCGAAAAACCTTCTACGAGCTGCAGT 1162
||||| ||||| | ||||||||||| ||||||||||| |||| |||| |||
Sbjct 968 CTTGGGGGCATCTGGGATATCCGGGGCAAACTACACGAAAAACCTTTTACGCGCTGTAGT 1027
Query 1163 TCTTTTCCAATACA-TTCCAAAGTTATATAGACTTCTACCGTTTCTTGCTGGACAAACAC 1221
|||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 1028 TCTTTTCCAATACACTTC-AAAGTTATATAGACTTCTACCATTTCTTGCTGGACAAACAC 1086
Query 1222 CTACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATTAATCTTCTCACTTTCA 1281
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1087 AGACCGGGTTCATATTTGAGTCAGCTTGGGCTAATTTTGTCATTAATCTTCTCACTTTCA 1146
Query 1282 TGCTTGCTGGACATGTTGTTGGTTCTTGCTGGTATCTATTTGGTCTGCAG 1331
|||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1147 TGCTTGCTGGACATGTTGTTGGCTCTTGCTGGTATCTTTTTGGTCTGCAG 1196
Score = 1430 bits (774), Expect = 0.0
Identities = 939/1019 (92%), Gaps = 9/1019 (1%)
Strand=Plus/Plus
Query 1457 CAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATCTATTTAAAAGCAGTCAATCT 1516
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1253 CAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATATATTTAAAAGCAGTCAATCT 1312
Query 1517 TACCAATCATTCTAATCTCTTCACAAGATACAGTTACTCTCTCTTCTGGGGCTTCCAGCA 1576
|||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1313 TACCAATCATTCTAGTCTCTTCACAAGATACAGCTACTCTCTCTTCTGGGGTTTCCAGCA 1372
Query 1577 AATCAGCACTCTTGCTGGCAACCAAGTCCCAAGCTACTTTCTAGGGGAGGTCTTCTTTAC 1636
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 AATAAGCACTCTTGCTGGAAACCAAGTCCCAAGCTACTTTCTAGGGGAGGTCTTCTTTAC 1432
Query 1637 TATGGGTATCATTGGACTAGGGCTTTTACTTTTTGCGCTTCTTATTGGTAATATGCAAAA 1696
||||||||||| ||| || |||||||| |||||||| |||||||||||||||||||||||
Sbjct 1433 TATGGGTATCACTGGCCTGGGGCTTTTGCTTTTTGCCCTTCTTATTGGTAATATGCAAAA 1492
Query 1697 TTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGGCGTGATGTGGA 1756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1493 TTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGGCGTGATGTGGA 1552
Query 1757 GCAATGGATGAGCCATAGACGGTTGCCAGATGGTATAAGAAGGAGGGTGCGAGAGGCTGA 1816
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1553 GCAATGGATGAGCCATAGACGGTTGCCAAATGGTATAAGAAAGAGGGTGCGAGAGGCTGA 1612
Query 1817 GCGGTTTAACTGGGCTGCTACTAGAGGCGTTAACGAAGAATTGCTTTTTGAGAATATGCC 1876
||||| |||||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 1613 ACGGTTCAACTGGGCTGCTACCAGAGGCGTTAACGAAGAATTACTCTTTGAGAATATGCC 1672
Query 1877 TGATGATCTTCAAAGAGATATAAGACGACACCTCTTCAAATTTCTCAAGAAGGTGAGAAT 1936
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1673 TGATGATCTTCAAAGAGATATAAGACGACACCTCTTTAAATTTCTCAAGAAGGTGAGAAT 1732
Query 1937 ATTTTCGTTGATGGATGAACCAATCTTAGATGCAATCCGTGAGAGGCTGAAACAGAGGAC 1996
||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||
Sbjct 1733 ATTTTCGTTGATGGATGAATCAATCTTAGATGCCATCAGTGAGAGGCTGAAACAGAGGAC 1792
Query 1997 ATACATAGGGAGTAGCACAGTGTTGCACCGTGGAGGACTAGTTGAGAAAATGGTATTCAT 2056
||||||||||| |||||||||||||| | | ||||| |||||||||||||||||||||||
Sbjct 1793 ATACATAGGGAATAGCACAGTGTTGCGCAGCGGAGGTCTAGTTGAGAAAATGGTATTCAT 1852
Query 2057 AGTGAGAGGTGAGATGGAGAGCATTGGAGAAGATGGTTCTGTTCTTCCATTATATGAAGG 2116
|||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||
Sbjct 1853 TGTGAGAGGTGAGATGGAGAGCATTGGAGAAGACGGTTCTGTTCTTACATTATCGGAAGG 1912
Query 2117 CGATGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCTGTAAACCCCGA 2176
||| |||||||| |||||||| ||||||||||||||| |||||| |||||||||||| ||
Sbjct 1913 CGACGTTTGTGGCGAAGAACTTCTCACTTGGTGCCTCAAACGCTTTTCTGTAAACCCTGA 1972
Query 2177 TGGGACGAGGATAAGGATGCCATCAAAGGGATTGCTTAGTAGCAGAAATGTAAGGTGTGT 2236
||||||||| |||| ||||||| ||||||||||| |||| | ||||||||| ||||||||
Sbjct 1973 TGGGACGAGAATAAAGATGCCACCAAAGGGATTGGTTAGCAACAGAAATGTTAGGTGTGT 2032
Query 2237 GACAAATGTGGAGGCGTTTTCGCTGAGTGTAGCCGATCTGGAAGACGTAACGAGCTTGTT 2296
|||||||||||| ||||||||||||||| |||| ||||| ||||||||| ||||||||||
Sbjct 2033 GACAAATGTGGAAGCGTTTTCGCTGAGTATAGCAGATCTTGAAGACGTAGCGAGCTTGTT 2092
Query 2297 TTCGAGATTCTTGAGGAGTCATAGAGTCCAAGGAGCCATAAGGTACGACTCTCCATATTG 2356
||||||||| | ||||| |||||||||||||||||||||||||| || ||||| |||||
Sbjct 2093 CTCGAGATTCCTAAGGAGCCATAGAGTCCAAGGAGCCATAAGGTATGAGTCTCCTTATTG 2152
Query 2357 GAGGCTACGAGCGGCTAGGCAGATTCAAGTGGCGTGGAGATACCGTAGGAGACGGCTTCA 2416
||||||||| || || | |||||||||| ||||||||||| ||||||||||||||
Sbjct 2153 GAGGCTACG-GC----AG--A--TTCAAGTGGCTTGGAGATACCGAAGGAGACGGCTTCA 2203
Query 2417 TAGATTATGCACTCCTCAGTCTAGTTATAGCCTTTAGTTTGTATTCTTCATTCTTGATG 2475
||| ||| || | ||||||||||||| | || |||| || ||| ||||||||| ||||
Sbjct 2204 GAGAGTATACAGTGCTCAGTCTAGTTACATCCGTTAGGTTATATGCTTCATTCTCGATG 2262
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96368319850
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5