BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G17700.1 Length=2556 Score E Sequences producing significant alignments: (Bits) Value Ahg929630 jgi|Araly1|929630|scaffold_302087.1 3901 0.0 Ahg341904 jgi|Araly1|341904|fgenesh1_pg.C_scaffold_3001667 1814 0.0 Ahg929632 jgi|Araly1|929632|scaffold_302089.1 1535 0.0 > Ahg929630 jgi|Araly1|929630|scaffold_302087.1 Length=2348 Score = 3901 bits (2112), Expect = 0.0 Identities = 2272/2349 (97%), Gaps = 11/2349 (0%) Strand=Plus/Plus Query 136 GAAACCGTGATTTTGGTCAAGAAATGGCTTCCCACAACGAAAACGATGATATTCCCATGC 195 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GAAACCTTGATTTTGGTCAAGAAATGGCTTCCCACAACGAAAACGATGATATTCCCATGC 60 Query 196 TTCCGATTTCAGACCCATCATCTCGTACTAGAGCCAGAGCTTTCACTTCCAGGAGTCGTA 255 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTCCAATTTCAGACCCATCATCTCGTACTAGAGCCAGAGCTTTCACTTCCAGGAGTCGTA 120 Query 256 GCGTTTCTCTCTCAAACCCTACTTCCTCCATTGAAGGATTTGACACTTCCACTGTGGTTT 315 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 121 GCGTTTCTCTCTCAAACCCTACTTCCTCCATTGAAGGATTTGACAATTCCACTGTGGTTT 180 Query 316 TAGGCTACACGGGTCCTCTTCGAACTCAGAGACGTCCTCCTTTAGTTCAAATGAGTGGTC 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TAGGCTACACGGGTCCTCTTCGAACTCAGAGACGTCCTCCTTTAGTTCAAATGAGTGGTC 240 Query 376 CTCTTACCTCTACTCGCAAGCATGAACCTCTCTTTCTTCCTCA----TC--C---TTCTT 426 ||||||||||||||||||| | ||||||||||||||||||||| || | ||||| Sbjct 241 CTCTTACCTCTACTCGCAAACCTGAACCTCTCTTTCTTCCTCATCCGTCTTCTGGTTCTT 300 Query 427 CTGATTCCGTTGGTGTCTCTTCTCAGCCTGAGAGGTATCCTTCTTTTGCTGCTCTTGAAC 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CTGATTCCGTTGGTGTCTCTTCTCAGCCTGAGAGGTATCCTTCTTTTGCTGCTCTTGAAC 360 Query 487 ATAAAAACTCCTCAGAGGATGAGTTCGTTTTGAAACACGCAAATCTCTTGAGGTCTGGAC 546 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ATAAAAACTCCTCAGACGATGAGTTCGTTTTGAAACACGCAAATCTCTTGAGGTCTGGAC 420 Query 547 AATT-GGGAATGTGTAATGATCCTTACTGTACTACTTGCCCTTCTTACTACAACCGTAAG 605 |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 AATTAGGG-ATGTGTAATGATCCTTACTGTACTACTTGCCCTTCTTACTACAACCGTAAG 479 Query 606 GCTGCTCAAATCCCTACTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAACGCT 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 480 GCTGCTCAAATCCCTACTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAATGCT 539 Query 666 CTGTATGATGATGCTAAAGGTTGGGCAAGGAGATTTGCTTCCTCTGTTAATAGATACTTA 725 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 CTGTATGATGATGCTAAAGGTTGGGCAAGGAGATTTGCTTCCTCTGTTAATAGATACTTA 599 Query 726 CCTGGAATCATGAATCCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTT 785 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 CCTGGAATCATGAATCCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTT 659 Query 786 TCATGCTTGTTAGCTATTTTTATAGATCCCCTCTTCTTCTTCCTCATAAAAGTCCAAGAG 845 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 660 TCATGCTTGTTAGCTATTTTTATAGATCCTCTCTTCTTCTTCCTCATAAAAGTCCAAGAG 719 Query 846 CAAAACAAATGTATTATGATTGATTGGCCGATGACTAAAGCATTTGTAGCTGTAAGAAGT 905 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 720 CAAAACAAATGCATTATGATTGATTGGCCGATGACTAAAGCATTTGTAGCTGTTAGAAGT 779 Query 906 GTAACAGATGTTATATTCACTATGAACATTCTACTTCAGTTCCGATTGGCCTATGTAGCT 965 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 780 GTAACAGATGTTATATTCACTATGAACATTCTGCTTCAGTTCCGATTGGCCTACGTAGCT 839 Query 966 CGTGAGTCTACGGTAGTTGGAGCTGGCCAGTTAGTTAGTCATCCCaaaaaaaTTGCCCTT 1025 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 840 CGTGAGTCTACGGTAGTTGGTGCTGGCCAGTTAGTTAGTCATCCCAAAAAAATTGCCCTT 899 Query 1026 CATTACCTCAAAGGAAAGTTTTTCCTTGACTTGTTCATAGTGATGCCACTTCCACAGATA 1085 |||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 900 CATTACTTTAGAGGAAAGTTTTTCCTTGACTTGTTCATAGTGATGCCACTTCCACAGATA 959 Query 1086 TTGATACTATGGATAATACCAGCACATTTGGGTGCATCCGGGGCAAACTATGCGAAAAAC 1145 ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 960 TTGATTTTATGGATAATACCAGAACATTTGGGTGCATCCGGGGCAAACTATGCGAAAAAC 1019 Query 1146 CTTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTCTACCGTTT 1205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1020 CTTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTCTACCATTT 1079 Query 1206 CTTGCTGGACAAACACCTACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATT 1265 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1080 CTTGCTGGACAAACACCGACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATT 1139 Query 1266 AATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGTTCTTGCTGGTATCTATTTGGT 1325 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 1140 AATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGCTCTTGCTGGTATCTTTTTGGT 1199 Query 1326 CTGCAGAGAGTTAATCAGTGCCTTCGAAATGCTTGCGGTAATTTTGGGCGTGAATGTCAA 1385 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 1200 CTGCAGAGAGTTAATCAATGCCTTCGAAATGCTTGCGGTAATTTTGAGCGTGAATGTCAT 1259 Query 1386 GATCTTATAGATTGTGGTAATGGAAATAGCAGTGTATTAGTACGAGCTACCTGGAAAGAT 1445 ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||| Sbjct 1260 GATCTTATAGATTGTGGTAATGGAATTAGCACTGTGTTAGTACGAGCTACCTGGAGAGAT 1319 Query 1446 AATGCGAGTGCCAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATCTATTTAAAA 1505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320 AATGCGAGTGCCAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATCTATTTAAAA 1379 Query 1506 GCAGTCAATCTTACCAATCATTCTAATCTCTTCACAAGATACAGTTACTCTCTCTTCTGG 1565 ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1380 GCAGTCAATCTAACCAATCATTCTAGTCTCTTCACAAGATACAGTTACTCTCTCTTCTGG 1439 Query 1566 GGCTTCCAGCAAATCAGCACTCTTGCTGGCAACCAAGTCCCAAGCTACTTTCTAGGGGAG 1625 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1440 GGCTTCCAGCAAATCAGCACTCTTGCTGGAAACCAAGTCCCAAGCTACTTTCTAGGGGAG 1499 Query 1626 GTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTACTTTTTGCGCTTCTTATTGGT 1685 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1500 GTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTGCTTTTTGCGCTTCTTATTGGT 1559 Query 1686 AATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGG 1745 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1560 AATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTAAGACGG 1619 Query 1746 CGTGATGTGGAGCAATGGATGAGCCATAGACGGTTGCCAGATGGTATAAGAAGGAGGGTG 1805 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1620 CGTGATGTGGAACAATGGATGAGCCATAGACGGTTGCCAGATGGTATAAGAAAGAGGGTG 1679 Query 1806 CGAGAGGCTGAGCGGTTTAACTGGGCTGCTACTAGAGGCGTTAACGAAGAATTGCTTTTT 1865 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 1680 CGAGAGGCTGAGCGGTTCAACTGGGCTGCTACTAGAGGCGTTAACGAAGAATTGCTCTTT 1739 Query 1866 GAGAATATGCCTGATGATCTTCAAAGAGATATAAGACGACACCTCTTCAAATTTCTCAAG 1925 || ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 1740 GAAAATATGCCTGATGATCTCCAAAGAGATATAAGACGACACCTCTTTAAATTTCTCAAG 1799 Query 1926 AAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAGATGCAATCCGTGAGAGGCTG 1985 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1800 AAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAGATGCAATCCGTGAGAGGCTG 1859 Query 1986 AAACAGAGGACATACATAGGGAGTAGCACAGTGTTGCACCGTGGAGGACTAGTTGAGAAA 2045 |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1860 AAACAGAGGACATATATAGGGAGTAGCACAGTGTTGCACCGCGGAGGTCTAGTTGAGAAA 1919 Query 2046 ATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAGATGGTTCTGTTCTTCCA 2105 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1920 ATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAGAAGACGGTTCTGTTCTTCCT 1979 Query 2106 TTATATGAAGGCGATGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCT 2165 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1980 TTATATGAAGGAGACGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCT 2039 Query 2166 GTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAGGGATTGCTTAGTAGCAGAAAT 2225 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 2040 GTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAGGGATTGCTTAGCAACAGAAAT 2099 Query 2226 GTAAGGTGTGTGACAAATGTGGAGGCGTTTTCGCTGAGTGTAGCCGATCTGGAAGACGTA 2285 || ||||||||||||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct 2100 GTTAGGTGTGTGACAAATGTGGAGGCATTTTCGCTGAGTGTGGCAGATCTTGAAGACGTA 2159 Query 2286 ACGAGCTTGTTTTCGAGATTCTTGAGGAGTCATAGAGTCCAAGGAGCCATAAGGTACGAC 2345 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2160 ACAAGCTTGTTCTCGAGATTCTTGAGGAGTCATAGAGTCCAAGGAGCCATAAGGTACGAC 2219 Query 2346 TCTCCATATTGGAGGCTACGAGCGGCTAGGCAGATTCAAGTGGCGTGGAGATACCGTAGG 2405 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||| Sbjct 2220 TCTCCATATTGGAGGCTACAAGCTGCTAGGCAGATTCAAGTGGCGTGGAGATATCGTAGG 2279 Query 2406 AGACGGCTTCATAGATTATGCACTCCTCAGTCTAGTTATAGCCTTTAGTTTGTATTCTTC 2465 ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| || Sbjct 2280 AGACGGCTTCAGAGATTATGTACTCCTCAGTCTAGTTACAGCCTTTAGTTTGTATTCCTC 2339 Query 2466 ATTCTTGAT 2474 ||| ||||| Sbjct 2340 ATTTTTGAT 2348 > Ahg341904 jgi|Araly1|341904|fgenesh1_pg.C_scaffold_3001667 Length=2262 Score = 1814 bits (982), Expect = 0.0 Identities = 1661/1979 (84%), Gaps = 86/1979 (4%) Strand=Plus/Plus Query 504 GATGAGTTCGT-TTTGAAACACGCAAATCTCTTGAGGTCTGGACAATT-GGGAATGTGTA 561 ||||| || || || ||| |||||||||||||||| |||||||| || ||| ||||| | Sbjct 319 GATGATTTTGTCTTCCAAA-ACGCAAATCTCTTGAGATCTGGACAGTTAGGG-ATGTGCA 376 Query 562 ATGATCCTTACTGTACTACTTGCCCTTCTTACTACAACCG-TAAGGCTGCTCAA-ATCCC 619 ||||||||||||| |||||||||||||||||||||||||| || ||||||||| || | Sbjct 377 ATGATCCTTACTGCACTACTTGCCCTTCTTACTACAACCGCCAA-GCTGCTCAATTTCAC 435 Query 620 TACTTCTAGAGTTTCTGCCCTTTTTGATTCCACGTTCCATAAC-GCTCTGTATGATGATG 678 ||||| ||||||||| || | | | || || | || | |||||||||||||| Sbjct 436 -ACTTCCAGAGTTTCT-ACC-TCTAGGTT--TCG---C---ACTGTTCTGTATGATGATG 484 Query 679 CTAAAGGTTGGGC-AAGGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATG 737 ||| ||||||||| || | ||||||| ||||||||| ||||| |||||||||||| ||| Sbjct 485 CTAGAGGTTGGGCTAA-GCGATTTGCCTCCTCTGTTCGTAGATGCTTACCTGGAATAATG 543 Query 738 AATCCTCATGCCAAAGAGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTT-GTT 796 ||||||||| ||||| |||||| |||||||| | |||| ||| ||||| |||| | | Sbjct 544 AATCCTCATTCCAAATTCGTTCAAGTCTGGACTAGAGTCTTAGCCTTTTCAAGCTTAG-T 602 Query 797 AGCTATTTTTATAGATCCCCTCTTCTTCTTCCTCATA-AAAGTCCAA-GAGCAAAACAAA 854 || |||||||||||||| |||||||| |||||| || | ||||| || | |||||| Sbjct 603 GGCCATTTTTATAGATCCTCTCTTCTTGTTCCTCTTATTTA-TCCAACAAG-ACAACAAA 660 Query 855 TGTATTA-TGATTGATTGGCCGAT--GACTAAAGCATTTGTAG-CTGTAAGAAGTGTAAC 910 || ||| |||||||||| || | |||||||| ||| || | || | |||||| |||| Sbjct 661 TG-CTTAGCGATTGATTGG-CG-TGCGACTAAAGTATTGGT-GTCTCTTAGAAGTATAAC 716 Query 911 AGATGTTATATTC-ACTATGAACATTCTACTTCAGTTCCGATTGGCCTATGTAGCTCGTG 969 ||| || ||||| || || ||||||||||||||||| | |||||||||||||| | || Sbjct 717 GGATCTTGTATTCTAC-ATTAACATTCTACTTCAGTTTAGGTTGGCCTATGTAGCCCCTG 775 Query 970 AGTCTACG-GTAGTTGGAGCTGGCCAGTTAGTTAG-TCATCCCaa-aaaaaTTGCCCTTC 1026 | |||| | ||||||| || |||||||||||| | |||| |||| ||||||||| | | Sbjct 776 AATCTA-GAATAGTTGGTGCCGGCCAGTTAGTT-GATCAT-CCAAGAAAAATTGCTCGCC 832 Query 1027 ATTACCTCAAAGGAAAGTTTTTCCTTGACT-TGTTCATAGTGAT-GCCACTTCCACAGAT 1084 ||||| || ||||||||||||| ||||| | ||||||||||| | ||| |||||||||| Sbjct 833 ATTACTTCCAAGGAAAGTTTTTTCTTGA-TCTGTTCATAGTGTTACCCA-TTCCACAGAT 890 Query 1085 ATTGATACTATGGATAATACCAGCACATTTGGGTGCATC-CGGGGCAA-ACTATGCGAAA 1142 | ||||| ||||||||||||||||||| ||||| || | | ||| || | |||| |||| Sbjct 891 AATGATATTATGGATAATACCAGCACACTTGGGCACA-CGCAGGG-AAGAATATGAGAAA 948 Query 1143 AACCTTCTACGAGCTGCAGTTCTTTTCCAATACATTCCAAAGTTATATAGACTTC-TACC 1201 | || |||| ||| | |||||||| ||||||||||||||||||||||||| || |||| Sbjct 949 CAGATTATACGCGCTACGGTTCTTTTTCAATACATTCCAAAGTTATATAGAC-TCTTACC 1007 Query 1202 GT-TTCTTGCTGGACAAACACCTACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTG 1260 | ||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 1008 -TCTTCTTGCTGGACAAACACCGACCGGCTTCATATTTGAGTCAGCCTGGGCTAATTTTG 1066 Query 1261 TTATTAATCTTCTCACTTTCATGCTTGCTGGACATGTTGTTGGTTCTTGCTGGTATCTAT 1320 |||||||||||||||| |||||||||||||| || | |||||| |||||||||||||| | Sbjct 1067 TTATTAATCTTCTCACCTTCATGCTTGCTGGTCACGCTGTTGGCTCTTGCTGGTATCT-T 1125 Query 1321 T-TGGTCTGCAGAGAGTTAATCAGTGCCTTC-GAAATGCTTGCGGTA-ATTT-TG-GGCG 1375 | |||||||||||||||||| | ||| | | | ||||||| || | |||| || || Sbjct 1126 TCTGGTCTGCAGAGAGTTAAGAAATGCATGCTG-AATGCTT--GGAATATTTCTGTGG-A 1181 Query 1376 TGAATGTCA-AGATCTTATAGATTG-TGGTAATGGAA-ATA-GCAGT--GTA-TTAGTAC 1428 |||| || | | ||||||| ||||| | | ||||| || ||| | | | | | || Sbjct 1182 TGAACGT-AGAAATCTTATCGATTGTTCG-CGTGGAAGTTATGCA-TCCG-AGTCACAAC 1237 Query 1429 GAGCTAC-CTGGAAAGATAATGCGAGTGCCAATGCTTGTTTCCAAGAAGA-TGGTTTTCC 1486 ||||| | ||||| |||| ||| |||| |||||||||||| |||| ||| ||||||| | Sbjct 1238 GAGCT-CTCTGGAGAGATGGTGCTAGTGTCAATGCTTGTTTTCAAG-AGAGTGGTTTTAC 1295 Query 1487 TTATGGAATCTATTTAAAAGCAGTCAATCTTACCAATCATTCTAATCTCTTCACAAGATA 1546 |||||| |||||| | || ||||| |||||||||||||| |||| | ||||||||||||| Sbjct 1296 TTATGGGATCTATCTGAAGGCAGTGAATCTTACCAATCAATCTAGTTTCTTCACAAGATA 1355 Query 1547 CAGTTACTCTCTCTTCTGGGGCTTCCAGCAAATCAGCACTCTTGCTGGCAACCAAGT-CC 1605 |||||| ||||| || ||||| ||||| ||||| ||||| |||||||| ||| | | || Sbjct 1356 CAGTTATTCTCTGTTTTGGGGATTCCAACAAATAAGCACACTTGCTGGAAACTTA-TCCC 1414 Query 1606 CAAGCTACTTTCTAGGGGAGGTCTTCTTTACTATGGGTATCATTGGACTAGGGCTTTTAC 1665 |||| |||| | |||||||| |||||||| |||||||||||||||||||||||||| | Sbjct 1415 CAAGTTACTCAGTGGGGGAGGTTTTCTTTACAATGGGTATCATTGGACTAGGGCTTTTGC 1474 Query 1666 TTTTTGCGCTTCTTATTGGTAATATGCAAAATTTCCTTCAAGCTCTTGGTAAAAGGAATT 1725 |||||| || ||||| ||||||||||| || ||||||||| |||||| | |||| Sbjct 1475 TTTTTGTGCGGCTTATCGGTAATATGCAGAACTTCCTTCAATCTCTTGATCGGAGGAGGA 1534 Query 1726 TGGAAATGACGCTGAGACGGCGTGATGTGGAGCAATGGATGAGCCATAGACGGTTGCCAG 1785 ||||||||| |||||||||||||||||| ||||| |||||||||||||||| |||||||| Sbjct 1535 TGGAAATGATGCTGAGACGGCGTGATGTAGAGCAGTGGATGAGCCATAGACTGTTGCCAG 1594 Query 1786 ATGGTATAAGAAGGAGGGTGCGAGAGGCTGAGCGGTTTAACTGGGCTGCTACTAGAGGCG 1845 | | |||||||| || ||||| ||||||||||||| || |||||||| |||||||| | Sbjct 1595 AAGATATAAGAAAAAGAGTGCGCGAGGCTGAGCGGTACAATTGGGCTGCGACTAGAGGAG 1654 Query 1846 TTAACGAAGAATTGCTTTTTGAGAATATGCCTGATGATCTTCAAAGAGATATAAGACGAC 1905 ||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct 1655 TTAACGAAGAATTTCTATTCGAGAATATGCCTGATGACCTTCAAAGAGATATAAGACGAC 1714 Query 1906 ACCTCTTCAAATTTCTCAAGAAGGTGAGAATATTTTCGTTGATGGATGAACCAATCTTAG 1965 ||||||| |||||||||||||||||||||||||||||||||||||||||| || | |||| Sbjct 1715 ACCTCTTTAAATTTCTCAAGAAGGTGAGAATATTTTCGTTGATGGATGAATCAGTTTTAG 1774 Query 1966 ATGCAATCCGTGAGAGGCTGAAACAGAGGACATACATAGGGAGTAGCACAGTGTTGCACC 2025 || |||||||||||||| |||||||||||||||||||| || ||||||| |||||||||| Sbjct 1775 ATTCAATCCGTGAGAGGTTGAAACAGAGGACATACATAAGGTGTAGCACGGTGTTGCACC 1834 Query 2026 GTGGAGGACTAGTTGAGAAAATGGTATTCATAGTGAGAGGTGAGATGGAGAGCATTGGAG 2085 | |||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1835 GCAGAGGTCTAGTAGAAAAAATGGTATTCATAGTGAGAGGTGAGATGGAGAGTATTGGAG 1894 Query 2086 AAGATGGTTCTGTTCTTCCATTAT-ATGAAGGCGATGTTTGTGGTGAAGAACTCCTCACT 2144 |||| |||||| ||||||| |||| | |||||||| |||||||||||||||||||||||| Sbjct 1895 AAGACGGTTCTATTCTTCCTTTATCA-GAAGGCGACGTTTGTGGTGAAGAACTCCTCACT 1953 Query 2145 TGGTGCCTCGAACGCTCTTCTGTAAACCCCGATGGGACGAGGATAAGGATGCCATCAAAG 2204 ||||||||||||||||||||| |||||||||||||||| | ||||| ||||||| ||||| Sbjct 1954 TGGTGCCTCGAACGCTCTTCTATAAACCCCGATGGGACTAAGATAAAGATGCCAACAAAG 2013 Query 2205 GGATT-GCTTAGTAGCAGAAATGTAAGGTGTGTGACAAATGTGGAGGCGTTTTCGCTGAG 2263 ||||| | |||| | ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 2014 GGATTAG-TTAGCAACAGAAATGTTAGGTGTGTAACAAATGTGGAGGCGTTTTCGCTGAG 2072 Query 2264 TGTAGCCGATCTGGAAGACGTAACGAGCTTGTTTTCGAGATTCTTGAGGAGTCATAGAGT 2323 |||||| ||||| ||||| ||||| ||||||||||| |||||||| ||||||||| |||| Sbjct 2073 TGTAGCAGATCTTGAAGATGTAACAAGCTTGTTTTCAAGATTCTTAAGGAGTCATCGAGT 2132 Query 2324 CCAAGGAGCCATAAGGTACGACTCTCCATATTGGAGGCTACGAGCGGCTAGGCAGATTCA 2383 |||||||| ||||||||||| ||||| |||||||| |||| ||| || | ||||||||| Sbjct 2133 GCAAGGAGCTATAAGGTACGAGTCTCCTTATTGGAGACTACAAGCAGCGATGCAGATTCA 2192 Query 2384 AGTGGCGTGGAGATACCGTAGGAGACGGCTTCATAGATTATGCACTCCTCAGTCTAGTT 2442 |||||| ||||||||||| | |||||| ||||| ||||| | |||| |||||||||||| Sbjct 2193 AGTGGCTTGGAGATACCGAAAGAGACGACTTCAGAGATTTTACACTGCTCAGTCTAGTT 2251 > Ahg929632 jgi|Araly1|929632|scaffold_302089.1 Length=2263 Score = 1535 bits (831), Expect = 0.0 Identities = 1075/1190 (90%), Gaps = 27/1190 (2%) Strand=Plus/Plus Query 157 AAATGGCTTCCCACAACGAAAACGATGATATTCC-CATGCTTCCGATTTCAGACCCATCA 215 |||||||||| | |||||||||||| || | ||| | ||||||| ||||||||| ||||| Sbjct 19 AAATGGCTTCACTCAACGAAAACGAGGAGACTCCTC-TGCTTCCAATTTCAGACTCATCA 77 Query 216 TCTCGTACTAGAGCCAGAGCTTTCACTTCCAGGAGTCGTAGCGTTTCTCTCTCAAACCCT 275 ||||||||| || || |||||||||||||| ||||| |||||| |||||||||| | Sbjct 78 TCTCGTACT--AG--TGA--TTTCACTTCCAGGACTCGTACCGTTTCCCTCTCAAACCTT 131 Query 276 ACTTCCTCCATTGAAGGATTTGACACTTCCACTGTGGTTTTAGGCTACACGGGTCCTCTT 335 |||||||| |||| |||||||| | ||| ||||||||||| |||||||| ||||||||| Sbjct 132 TCTTCCTCCGTTGACGGATTTGAAAATTCAACTGTGGTTTTTGGCTACACAGGTCCTCTT 191 Query 336 CGAACTCAGAGACGTCCTCCTTTAGTTCAAATGAGTGGTCCTC-TTACCTCTACTCGCAA 394 ||||||| ||||| |||||| ||| ||||| |||||||||||| ||| ||||||| |||| Sbjct 192 CGAACTCGGAGACATCCTCCGTTACTTCAACTGAGTGGTCCTCTTTA-CTCTACTTGCAA 250 Query 395 GCATGAACCTCTCTTTCTTCCTCATCCTTCTTCTGATTCCGTTGGTGTCTCTTCTCAGCC 454 | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 251 ACCTGAACCTCTCTTTCTTCCTCTTCCTTCTTCTGATTCCGTTGGTGTCTCTTCTCAGCC 310 Query 455 TGAGAGGTATCCTTCTTTTGCTGCTCTTGAACATAAAAACTCCTCAGAGGATGAGTTCGT 514 ||||||| ||||||||||| |||| |||||||| | ||||||||||| ||||||| | | Sbjct 311 TGAGAGGGATCCTTCTTTTTCTGCCCTTGAACACGACAACTCCTCAGACGATGAGTCCCT 370 Query 515 TTTGAAACACGCAAATCTCTTGAGG-TCTGGACAATTGGGAATGTGTAATGATCCTTACT 573 ||||||| |||||||||||||| || ||||||||||| || || |||||||||||||||| Sbjct 371 TTTGAAATACGCAAATCTCTTG-GGATCTGGACAATTAGGTATTTGTAATGATCCTTACT 429 Query 574 GTACTACTTGCCCTTCTTACTACAACCGTAAGGCTGCTCAAATCCCTACTTCTAGAGTTT 633 ||||||||||||||||| | ||| |||||| | ||||||| ||||||| | ||||||| Sbjct 430 GTACTACTTGCCCTTCTGATTACTTCCGTAAAACAGCTCAAACCCCTACTCCCAGAGTTT 489 Query 634 CTGCCCTTTTTGATTCCACGTTCCATAACGCTCTGTATGATGATGCTAAAGGTTGGGCAA 693 ||||| ||||| ||||| |||||||||| |||||||||||||||||||||| |||||| | Sbjct 490 CTGCCATTTTTTATTCCCCGTTCCATAATGCTCTGTATGATGATGCTAAAGATTGGGCGA 549 Query 694 GGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATGAATCCTCATGCCAAAG 753 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 550 GGAGATTTGCTTCCTCTGTTAATAGATACTTACCTGGAATCATGAATCCTCATGCCAAAG 609 Query 754 AGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTTGTTAGCTATTTTTATAGATC 813 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 610 AGGTTCAAACCTGGACTAAATTCTTCGCCCTTTCATGCTTGTTAGCTATTTTTATAGATC 669 Query 814 CCCTCTTCTTCTTCCTCATAAAAGTCCAAGAGCAAAACAAATGTATTATGATTGATTGGC 873 | ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 670 CTCTCTTCTTCTTCCTCATAAAAGTTCAAGAGCAAAACAAATGCATTATGATTGATTGGC 729 Query 874 CGATGACTAAAGCATTTG-TAGCTGT-AAGAAGTGTAACAGATGTTATATTCACTATGAA 931 ||||| ||||||| |||| ||||||| || ||||||||||||| ||||| || || |||| Sbjct 730 CGATGGCTAAAGC-TTTGGTAGCTGTTAA-AAGTGTAACAGATATTATAATCTCTGTGAA 787 Query 932 CATTCTACTTCAGTTCCGATTGGCCTATGTAGCTCGTGAGTCTACGGTAGTTGGAGCTGG 991 |||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 788 CATTCTGCTTCAGTTCCGAATGGCCTATGTAGCTCGTGAGTCTACGGTAGTTGGTGCTGG 847 Query 992 CCAGTTAGTTAGTCATCCCaaaaaaaTTGCCCTTCATTACCTCAAAGGAAAGTTTTTCCT 1051 |||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||| Sbjct 848 CCAGTTAGTTAGTCATCCCAAAAAAATTGCCCTTCATTACTTTAGAGGAAAGTTTTTCCT 907 Query 1052 TGACTTGTTCATAGTGATGCCACTTCCACAGATATTGATACTATGGATAATACCAGCACA 1111 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct 908 TGACTTGTTCATAGTGATGCCACTTCCACAGATATTGATATTATGGATAATACCAGAACA 967 Query 1112 TTTGGGTGCATC--------C-GGGGCAAACTATGCGAAAAACCTTCTACGAGCTGCAGT 1162 ||||| ||||| | ||||||||||| ||||||||||| |||| |||| ||| Sbjct 968 CTTGGGGGCATCTGGGATATCCGGGGCAAACTACACGAAAAACCTTTTACGCGCTGTAGT 1027 Query 1163 TCTTTTCCAATACA-TTCCAAAGTTATATAGACTTCTACCGTTTCTTGCTGGACAAACAC 1221 |||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 1028 TCTTTTCCAATACACTTC-AAAGTTATATAGACTTCTACCATTTCTTGCTGGACAAACAC 1086 Query 1222 CTACCGGATTCATATTTGAGTCAGCTTGGGCTAATTTTGTTATTAATCTTCTCACTTTCA 1281 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1087 AGACCGGGTTCATATTTGAGTCAGCTTGGGCTAATTTTGTCATTAATCTTCTCACTTTCA 1146 Query 1282 TGCTTGCTGGACATGTTGTTGGTTCTTGCTGGTATCTATTTGGTCTGCAG 1331 |||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1147 TGCTTGCTGGACATGTTGTTGGCTCTTGCTGGTATCTTTTTGGTCTGCAG 1196 Score = 1430 bits (774), Expect = 0.0 Identities = 939/1019 (92%), Gaps = 9/1019 (1%) Strand=Plus/Plus Query 1457 CAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATCTATTTAAAAGCAGTCAATCT 1516 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1253 CAATGCTTGTTTCCAAGAAGATGGTTTTCCTTATGGAATATATTTAAAAGCAGTCAATCT 1312 Query 1517 TACCAATCATTCTAATCTCTTCACAAGATACAGTTACTCTCTCTTCTGGGGCTTCCAGCA 1576 |||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 1313 TACCAATCATTCTAGTCTCTTCACAAGATACAGCTACTCTCTCTTCTGGGGTTTCCAGCA 1372 Query 1577 AATCAGCACTCTTGCTGGCAACCAAGTCCCAAGCTACTTTCTAGGGGAGGTCTTCTTTAC 1636 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1373 AATAAGCACTCTTGCTGGAAACCAAGTCCCAAGCTACTTTCTAGGGGAGGTCTTCTTTAC 1432 Query 1637 TATGGGTATCATTGGACTAGGGCTTTTACTTTTTGCGCTTCTTATTGGTAATATGCAAAA 1696 ||||||||||| ||| || |||||||| |||||||| ||||||||||||||||||||||| Sbjct 1433 TATGGGTATCACTGGCCTGGGGCTTTTGCTTTTTGCCCTTCTTATTGGTAATATGCAAAA 1492 Query 1697 TTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGGCGTGATGTGGA 1756 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1493 TTTCCTTCAAGCTCTTGGTAAAAGGAATTTGGAAATGACGCTGAGACGGCGTGATGTGGA 1552 Query 1757 GCAATGGATGAGCCATAGACGGTTGCCAGATGGTATAAGAAGGAGGGTGCGAGAGGCTGA 1816 |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct 1553 GCAATGGATGAGCCATAGACGGTTGCCAAATGGTATAAGAAAGAGGGTGCGAGAGGCTGA 1612 Query 1817 GCGGTTTAACTGGGCTGCTACTAGAGGCGTTAACGAAGAATTGCTTTTTGAGAATATGCC 1876 ||||| |||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct 1613 ACGGTTCAACTGGGCTGCTACCAGAGGCGTTAACGAAGAATTACTCTTTGAGAATATGCC 1672 Query 1877 TGATGATCTTCAAAGAGATATAAGACGACACCTCTTCAAATTTCTCAAGAAGGTGAGAAT 1936 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1673 TGATGATCTTCAAAGAGATATAAGACGACACCTCTTTAAATTTCTCAAGAAGGTGAGAAT 1732 Query 1937 ATTTTCGTTGATGGATGAACCAATCTTAGATGCAATCCGTGAGAGGCTGAAACAGAGGAC 1996 ||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||| Sbjct 1733 ATTTTCGTTGATGGATGAATCAATCTTAGATGCCATCAGTGAGAGGCTGAAACAGAGGAC 1792 Query 1997 ATACATAGGGAGTAGCACAGTGTTGCACCGTGGAGGACTAGTTGAGAAAATGGTATTCAT 2056 ||||||||||| |||||||||||||| | | ||||| ||||||||||||||||||||||| Sbjct 1793 ATACATAGGGAATAGCACAGTGTTGCGCAGCGGAGGTCTAGTTGAGAAAATGGTATTCAT 1852 Query 2057 AGTGAGAGGTGAGATGGAGAGCATTGGAGAAGATGGTTCTGTTCTTCCATTATATGAAGG 2116 |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||| Sbjct 1853 TGTGAGAGGTGAGATGGAGAGCATTGGAGAAGACGGTTCTGTTCTTACATTATCGGAAGG 1912 Query 2117 CGATGTTTGTGGTGAAGAACTCCTCACTTGGTGCCTCGAACGCTCTTCTGTAAACCCCGA 2176 ||| |||||||| |||||||| ||||||||||||||| |||||| |||||||||||| || Sbjct 1913 CGACGTTTGTGGCGAAGAACTTCTCACTTGGTGCCTCAAACGCTTTTCTGTAAACCCTGA 1972 Query 2177 TGGGACGAGGATAAGGATGCCATCAAAGGGATTGCTTAGTAGCAGAAATGTAAGGTGTGT 2236 ||||||||| |||| ||||||| ||||||||||| |||| | ||||||||| |||||||| Sbjct 1973 TGGGACGAGAATAAAGATGCCACCAAAGGGATTGGTTAGCAACAGAAATGTTAGGTGTGT 2032 Query 2237 GACAAATGTGGAGGCGTTTTCGCTGAGTGTAGCCGATCTGGAAGACGTAACGAGCTTGTT 2296 |||||||||||| ||||||||||||||| |||| ||||| ||||||||| |||||||||| Sbjct 2033 GACAAATGTGGAAGCGTTTTCGCTGAGTATAGCAGATCTTGAAGACGTAGCGAGCTTGTT 2092 Query 2297 TTCGAGATTCTTGAGGAGTCATAGAGTCCAAGGAGCCATAAGGTACGACTCTCCATATTG 2356 ||||||||| | ||||| |||||||||||||||||||||||||| || ||||| ||||| Sbjct 2093 CTCGAGATTCCTAAGGAGCCATAGAGTCCAAGGAGCCATAAGGTATGAGTCTCCTTATTG 2152 Query 2357 GAGGCTACGAGCGGCTAGGCAGATTCAAGTGGCGTGGAGATACCGTAGGAGACGGCTTCA 2416 ||||||||| || || | |||||||||| ||||||||||| |||||||||||||| Sbjct 2153 GAGGCTACG-GC----AG--A--TTCAAGTGGCTTGGAGATACCGAAGGAGACGGCTTCA 2203 Query 2417 TAGATTATGCACTCCTCAGTCTAGTTATAGCCTTTAGTTTGTATTCTTCATTCTTGATG 2475 ||| ||| || | ||||||||||||| | || |||| || ||| ||||||||| |||| Sbjct 2204 GAGAGTATACAGTGCTCAGTCTAGTTACATCCGTTAGGTTATATGCTTCATTCTCGATG 2262 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 96368319850 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5