BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G18900.2 Length=2500 Score E Sequences producing significant alignments: (Bits) Value Ahg318651 jgi|Araly1|318651|fgenesh1_pm.C_scaffold_3001667 2242 0.0 Ahg929832 jgi|Araly1|929832|scaffold_302289.1 252 1e-65 Ahg952175 jgi|Araly1|952175|scaffold_43900002.1 134 4e-30 Ahg930677 jgi|Araly1|930677|scaffold_303134.1 134 4e-30 Ahg933273 jgi|Araly1|933273|scaffold_401261.1 100 4e-20 Ahg930816 jgi|Araly1|930816|scaffold_303273.1 62.1 2e-08 Ahg948509 jgi|Araly1|948509|scaffold_800396.1 56.5 9e-07 Ahg930838 jgi|Araly1|930838|scaffold_303295.1 56.5 9e-07 Ahg930837 jgi|Araly1|930837|scaffold_303294.1 54.7 3e-06 Ahg930018 jgi|Araly1|930018|scaffold_302475.1 52.8 1e-05 > Ahg318651 jgi|Araly1|318651|fgenesh1_pm.C_scaffold_3001667 Length=2421 Score = 2242 bits (1214), Expect = 0.0 Identities = 1606/1785 (90%), Gaps = 68/1785 (4%) Strand=Plus/Plus Query 1 ATGACGACAAGAACTTCGAATCACAAACGTTCTAGAAGCGATCCGGTCCCAAGAAAATCT 60 |||||||||||||| ||||| || ||||||||||||||||| || ||||| ||||||||| Sbjct 1 ATGACGACAAGAACATCGAAACATAAACGTTCTAGAAGCGACCCCGTCCCTAGAAAATCT 60 Query 61 CTCAAGAATAAAAAATCAAGCGAGGCCCTTT---ACA---A-C-A-TTCACATGGATGAA 111 |||||||| || |||||||| || |||||| ||| | | | |||||||||||||| Sbjct 61 CTCAAGAACAAGAAATCAAGTGAAACCCTTTACAACATCGATCGATTTCACATGGATGAA 120 Query 112 CTTTTGCAGAGAGAGATAGAACAGCTAAAATCTCTTTTAAAGTCCAGAAAATTACATCCC 171 | |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 121 CATTTGCAGAGAGAGATAGAACAGCTAAAATCTCTTCTAAAGTCCAGAAAATTACAT-CC 179 Query 172 GGGGGCAGGAGAGTCTCAAGTGATGAGATTGATTTATTGCTTCAAGAAGATGAAGTCTTA 231 || ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 180 -----CAAGAGAGTCTCAAGTGATGAGATTGATTTGTTGCTTCAAGAAGATGAAGTCTTA 234 Query 232 GTTCGGCGTGAAATGAAGACAGTCCTTGGACGCAAACTGTTCTTGGAAGATTCTAAAAAT 291 || ||||| |||||| |||||||| || |||||||||||||||||||||||||||||||| Sbjct 235 GTACGGCGAGAAATGGAGACAGTCATTCGACGCAAACTGTTCTTGGAAGATTCTAAAAAT 294 Query 292 GAAGATTCTTCTATCCCCAAGGAGGCGAAGAAACTGGTGGA-GGAAATAGCGGGTTTGGA 350 |||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct 295 GAAGATTCTTCTATCCCCAAGGAGGCAAAGAAACTGGT-GAGGGAAATCGCGGGTTTGGA 353 Query 351 GCTGCAAGTGATGTACTTAGAAACATATCTTCTTTTGTTATACCGGAGATTCTTCAACAA 410 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 354 GCTGCAAGTGATGTACTTAGAAACATATCTTCTTTTGTTATATCGAAGATTCTTCAACAA 413 Query 411 CAAAATTACATCT-AAGTTAGAATCAGAAGAGAAAGAGAGATCAGAGGATCTTCTTGAGT 469 ||||||||||||| || ||| ||||||| | |||||||| |||||| | | |||||| | Sbjct 414 CAAAATTACATCTGAA-TTAAAATCAGAGGGGAAAGAGATATCAGAAGCTATTCTTGGGA 472 Query 470 GTACCAAACTCATTGATTCA-CCaaaaaaaGGAGTCTGCAGCCCGCAGAAACTTGTAGAA 528 | || ||| ||| ||||||| ||||||| | ||||||||| ||||||||| |||||||| Sbjct 473 GCACTAAAGTCACTGATTCACCCAAAAACA-CAGTCTGCAGTCCGCAGAAAGTTGTAGAA 531 Query 529 GACTCTGGAATATTCCGCAGTCACTCATCGTTGTCTCATTGTTCAGGCTATTCCTTTAGA 588 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 532 GACTCTGGAATCTTCCGCAGTCACTCATCCTTGTCTCATTGTTCAGGCTATTCCTTTAGA 591 Query 589 ATGTCTCCCCATGCAATGGACTCATCATATCATCGATCTCTTCCTTTCTCAATGCTTGAG 648 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 592 ATGTCTCCCCAAGCAATGGACTCGTCATATCATCGATCTCTTCCTTTCTCAATGCTTGAG 651 Query 649 CAATCTGATATCGATGAGTTGATTGGGACATATGTTTCTGAAAACGTTCATAAGTCACCA 708 ||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||| Sbjct 652 CAATCCGATATCGATGAAATGATCGGGACATATGTTTCTGAAAACGTTCATAATTCACCA 711 Query 709 AATAGTTTATCTGAAGAGATGGTCAAGTGCATCTCAGAATTATGTCGTCAACTTG-TGGA 767 |||||||| |||||||||||| |||||||||||| | || ||| ||||||||||| | || Sbjct 712 AATAGTTTGTCTGAAGAGATGATCAAGTGCATCTTACAAGTATTTCGTCAACTTGCT-GA 770 Query 768 TCCAGGATCACTCGACAATGATCTAGAATCGAGCAGTCCTTTCCGCGGGAAAGAGCCTCT 827 ||||| ||||||||| |||||| |||| | ||||||||||||||||||||||||| || Sbjct 771 TCCAGAATCACTCGATGATGATCGAGAAACAAGCAGTCCTTTCCGCGGGAAAGAGCGACT 830 Query 828 GAAGATCATTAGTCGACCTTACGACAAGTTATTAATGGTGAAATCGATTA-GTAGAGACT 886 |||| ||||| |||||||||||||||| ||||||||||||||||||| || |||||||| Sbjct 831 GAAGGTCATTTGTCGACCTTACGACAAATTATTAATGGTGAAATCGA-TATGTAGAGACC 889 Query 887 CAGAGAAGTTAAATGCAGTTGAACCTGCTTTGAAACATTTCAGGTCGCTTGTTAATAAGT 946 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 890 CAGGGAAGTTAAATGCAGTTGAACCTGCTTTGAAACATTTCAGGTCGCTTGTTAATAAGT 949 Query 947 TAGAAGGAGTGAATCCAAGGAAGTTAAATCATGAAGAAAAGCTAGCTTTCTGGATTAATA 1006 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 950 TAGAAGGAGTGAATCCAAGGAAGTTAAATCATGAAGAAAAGCTAGCTTTCTGGATTAACA 1009 Query 1007 TACACAACTCTCTGGTTATGCATTCGATACTTGTCTATGGGAACCCTAAAAACAGTATGA 1066 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1010 TACACAACTCTCTGGTTATGCATTCGATAATTGTCTATGGGAACCCTAAAAACAGTATGA 1069 Query 1067 AAAGAGTATCTGGGTTGCTGAAGGCAGCTTACAACGTTGGAGGTCGAAGCTTGAACTTAG 1126 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1070 AAAGGGTATCTGGGTTGCTGAAGGCAGCGTACAACGTTGGAGGTCGAAGCTTGAACTTAG 1129 Query 1127 ATACCATTCAGACTTCAATCCTTGGTTGCCGTGTATTTAGGTTCTTGTTTGCTTCTAGAT 1186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1130 ATACCATTCAGACTTCAATCCTTGGTTGCCGTGTATTTAGGTTCTTGTTTGCTTCTAGAT 1189 Query 1187 CAAAGGGTAGAGCTGGAGATTTAGGAAGAGATTATGCTATAACTCAC-CGTGAGTCTCTA 1245 |||| |||| |||||||||||||||||||||||||||| |||||||| | |||| |||| Sbjct 1190 CAAAAGGTAAAGCTGGAGATTTAGGAAGAGATTATGCTGTAACTCACTC-TGAGCCTCTT 1248 Query 1246 CTTCATTTCGCTCTTTGCTCGGGGAGCTTGTCAGATCCATCAGTTCGTATATATACCCCC 1305 ||||||||||||||||||||||||| |||||||||||||||| | | | Sbjct 1249 CTTCATTTCGCTCTTTGCTCGGGGAACTTGTCAGATCCATCA------A-A----C---- 1293 Query 1306 AAGAACGTGATGATGGAGCTAGAATGTGGTAGAGAAGAGTATGTAAGATCAAACCTAGGA 1365 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1294 --G----TGATGATGGAGCTAGAATGTGGTAGAGAAGAGTATGTAAGATCAAACCTAGGA 1347 Query 1366 ATTTCCAAAGACAACAAGATTCTATTGCCGAAGCTTGTTGAAATATATGCCAAGGATACT 1425 || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct 1348 ATATCCAAAGACAACAAGATTCTTTTGCCGAAGCTTGTTGAATTATATGCCAAGGATACT 1407 Query 1426 GAACTCTGCAACGTCGGTGTTCTTGACATGATTGGGAAATGTTTGCCTTGTGAAGCAAGA 1485 |||| |||||||||||| |||| |||||||| || || | ||| ||||||||||||||| Sbjct 1408 CAACTTTGCAACGTCGGTATTCTCGACATGATCGGCAACTTTTTTCCTTGTGAAGCAAGA 1467 Query 1486 GATAGAATCCAGAAGTGTCGCAACAAGAAGCATGGAAGATTCTCTATAGATTGGATTGCA 1545 |||||||||||| ||||||| ||||||||||||||||||||||| || ||||||||| Sbjct 1468 GATAGAATCCAGCAGTGTCGGAACAAGAAGCATGGAAGATTCTCCATCGATTGGATT--- 1524 Query 1546 CATGATTTCAGATTCGGGAACGACTACAGGATATTTCCGAGTAGCTTCAATCTCCATGGA 1605 || | || | | | |||||||| ||||| | |||| |||||||||||||| Sbjct 1525 --TGG----A-AT--G--A-C---TACAGGATTTTTCCAATTAGCGTCAATCTCCATGGA 1569 Query 1606 ACTAGTCCATCTGTAGAGTTTAAAAGTGAGCTAATCGATCCTCATTCTAAGAATTCAGCT 1665 | |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct 1570 AATAGTCCATCTCTAGAGCTTAAAAGTGAGCTAATCGATCCTCATTCTAAGAATTCAG-T 1628 Query 1666 -GCTCCATTCGAAATATCACGAGTCTTTCACTGTGACGGCTTGTTGTTATGCACCTCCCA 1724 |||| |||||||||||| |||||| |||||||||||||||||||||||||| ||||||| Sbjct 1629 AGCTCAATTCGAAATATCTCGAGTCCTTCACTGTGACGGCTTGTTGTTATGCTCCTCCCA 1688 Query 1725 TTTCGACGCATCTAGAGTCTTGGTTTGGAACCCTTTAACTGGTGA 1769 | |||||| ||||||||||||||||||||| |||||||||| ||| Sbjct 1689 TGTCGACGAATCTAGAGTCTTGGTTTGGAATCCTTTAACTGATGA 1733 Score = 577 bits (312), Expect = 2e-163 Identities = 447/509 (88%), Gaps = 21/509 (4%) Strand=Plus/Plus Query 1774 GATATGATCCCTCCAGGCGTGAGCTTTGGATACTCTGAACTCAGTGTGTCTTTGAAGGGA 1833 ||||| ||| ||||||||| ||||||||||||||||||||| || ||||||||||||||| Sbjct 1837 GATATCATCGCTCCAGGCGGGAGCTTTGGATACTCTGAACTTAGCGTGTCTTTGAAGGGA 1896 Query 1834 AATACTTACTGGTTGGCTATAGTTGTAACAGAAACGCCCCGCACCATATCATTGCTCAAG 1893 ||||||||||||||||||| || | |||||||||||||||||| |||||| |||||||| Sbjct 1897 AATACTTACTGGTTGGCTAGAGGTATAACAGAAACGCCCCGCATCATATCGTTGCTCAAA 1956 Query 1894 TTTGATTTTTCAATAGAGAAATCTGTACTTGTGCCTCTTCCCTATCATAGTCTTCAGAGT 1953 ||||||||||||| ||| |||||||||| ||||||||||||||||| | |||| Sbjct 1957 TTTGATTTTTCAACAGATAAATCTGTACCTGTGCCTCTTCCCTATC---G------GAGT 2007 Query 1954 CGTCGTTTTGAAGCTAGTAGCCTTTCCGTTGTTAGAGAAGAGAAACTTTCTGTGTTATTA 2013 |||||||| ||||||| ||| ||| | |||||||||||||| ||||||||||||||||| Sbjct 2008 CGTCGTTTCGAAGCTACTAGTCTTACTGTTGTTAGAGAAGATAAACTTTCTGTGTTATTG 2067 Query 2014 CAGCGAGATATA-AGTTCCAAGACTGAGATATGGGTGACAAG-TAAGATTGATGACACCA 2071 |||||||||| | |||||||||||||||||||||||||| | |||||||||||| || | Sbjct 2068 CAGCGAGATA-ACAGTTCCAAGACTGAGATATGGGTGAC-TGATAAGATTGATGAGACTA 2125 Query 2072 CCAAAGTGGTGTCTTGGAGCAAGATCTTAGCATTGGATTTGAGCCCTCATCTTCAGATTT 2131 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2126 CCGAAGTGGTGTCTTGGAGCAAGGTCTTAGCATTGGATTTGAGCCCTCATCTTCAGATTT 2185 Query 2132 GGAATGATGCAAGTTTCTTGATAGGCGAAG-AGAAGAAAGTCATCATGTG-TGAGAGA-- 2187 |||||||||||||||||||| ||||| ||| ||||||||||| ||||||| || |||| Sbjct 2186 GGAATGATGCAAGTTTCTTGCTAGGC-AAGGAGAAGAAAGTCGTCATGTGCTGTGAGAAA 2244 Query 2188 TTGGTTGATGTGCACACG-TCCAAAGTCATGGTCTACATTGTTGGGGAGAACAATGTTGT 2246 ||| |||||| | ||| | || |||| |||||||||||||||||||| | | ||||| || Sbjct 2245 TTGATTGATGAGAACAAGGTC-AAAGACATGGTCTACATTGTTGGGGTGGATAATGTAGT 2303 Query 2247 CACACAAGTGGAATTTGGGGTAAAT-AAA 2274 |||| ||||||||||||| ||| || ||| Sbjct 2304 CACAGAAGTGGAATTTGGAGTAGATGAAA 2332 > Ahg929832 jgi|Araly1|929832|scaffold_302289.1 Length=1182 Score = 252 bits (136), Expect = 1e-65 Identities = 295/366 (81%), Gaps = 33/366 (9%) Strand=Plus/Plus Query 1822 TCTTTGAAGGGAAATACTTAC-TGGTTGGCTATAGTTGTAACAGAAACGCCCCGCACCAT 1880 |||||||||||||| || ||| | ||| ||| ||| || |||| ||||| | | Sbjct 638 TCTTTGAAGGGAAAAACATACAT-GTTTGCTTTAGATGAAACAAAAACG---TG---TGT 690 Query 1881 ATCATTGCTCAAGTTTGATTTTTCAATAGAGAAATCTGTACTTGTGCCTCTTCCCTATCA 1940 ||| |||||||| | ||||| ||||| |||||||||| |||||||||||||| | || Sbjct 691 ATCCTTGCTCAAATATGATTATTCAACAGAGAAATCTATACTTGTGCCTCTT--C---CA 745 Query 1941 TAGTCTTCAGAGTCGTCGTTTTGAAGCTAGTAGCCTTTCCGTTGTTAGAGAAGAGAAACT 2000 || | |||||||| ||||||||| | ||| |||||||||||||||||||||||||| Sbjct 746 TA--C--AAGAGTCGTTGTTTTGAAGAGACTAGTCTTTCCGTTGTTAGAGAAGAGAAACT 801 Query 2001 TTCTGTGTTATTACAGCGAGATATAAGTTCCAAGACTGAGATATGGGTGACAAGTAAGAT 2060 ||| |||||||||||| |||||| ||||| ||||||||||||||||||||||| | | Sbjct 802 TTCAGTGTTATTACAGAGAGATAAAAGTTGCAAGACTGAGATATGGGTGACAA--A---T 856 Query 2061 TGATGAC-ACCACCAAAG---TGGTG-TCT--TGGAGCAAGATCTTAGCATTGGATTTGA 2113 || ||| |||||||||| ||||| | | ||||||||| |||| ||||||||||||| Sbjct 857 -GA-GACCACCACCAAAGCGATGGTGGTGTCGTGGAGCAAGGTCTTGGCATTGGATTTGA 914 Query 2114 GCCCTCATCTTCAGATTTGGAATGATGCAAGTTTCTTGATAG-GCGAAGAGAAGAAAGTC 2172 |||||| |||| | |||||| |||||| ||||||||| | | | || |||||||||||| Sbjct 915 GCCCTCTTCTTGAAATTTGGTATGATGGAAGTTTCTTTCTTGAG-GAGGAGAAGAAAGTC 973 Query 2173 ATCATG 2178 |||||| Sbjct 974 ATCATG 979 > Ahg952175 jgi|Araly1|952175|scaffold_43900002.1 Length=1157 Score = 134 bits (72), Expect = 4e-30 Identities = 239/312 (77%), Gaps = 41/312 (13%) Strand=Plus/Plus Query 1819 GTGTCTTTGAAGGGAAATACTTACTGGTTGGCTA-T-AGTTGTAACAGAAAC-GCCCCGC 1875 ||||||||||||||||||||||||||||| ||| | || | | || |||| || | | Sbjct 564 GTGTCTTTGAAGGGAAATACTTACTGGTTTGCTCGTGAGAT--AGCA-AAACCGCATCTC 620 Query 1876 ACCATATCATTGCTCA-AGTTTGATTTTTCA-ATAGAGAAATC-TG-TACTT---GT--G 1926 |||||| |||||| | ||||||||| || | ||||||||| | | ||| || | Sbjct 621 GGCATATCCTTGCTCGGA-TTTGATTTT-CAGACAGAGAAATCATCAT-CTTTTTGTTTG 677 Query 1927 CCTCTTCCCTATCATAGTCTTCAGAGTCGTCGTTTTGAAGCTA-GTAGCCTTTCCGTTGT 1985 |||||||||||||| ||| || | || | | ||| | | || |||||||| || Sbjct 678 CCTCTTCCCTATCAGGGTC--CA----C-TC-TAT-GAAATTTTG-AGTCTTTCCGTCGT 727 Query 1986 TAGAGAAGAGAAACTTTCTGTGTT-ATTACAGCGAGAT-ATA-AGTTCCAAGACTGAGAT 2042 |||||||||||||||||| ||||| || ||| | | | ||| | | ||||||||||||| Sbjct 728 TAGAGAAGAGAAACTTTCCGTGTTTAT-ACAACCCGTTTATACA-T-CCAAGACTGAGAT 784 Query 2043 ATGGGTGACAAGTAAGATTGATGACACCACCA--AA-GT-G--GTGTCTTGGAGCAAGAT 2096 ||||||||| |||||||||||||||||||||| || | | || ||||||| |||| | Sbjct 785 ATGGGTGACGAGTAAGATTGATGACACCACCACCAAAGGAGCAGTTTCTTGGACCAAGGT 844 Query 2097 CTTAGCATTGGA 2108 |||| ||||||| Sbjct 845 CTTATCATTGGA 856 > Ahg930677 jgi|Araly1|930677|scaffold_303134.1 Length=1195 Score = 134 bits (72), Expect = 4e-30 Identities = 117/138 (85%), Gaps = 6/138 (4%) Strand=Plus/Plus Query 1981 GTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAGCG-AGATATAAGTTCCAAGACTGA 2039 ||||||||||||||||||||||||||||||||||| || | || || || | ||||| || Sbjct 794 GTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTACATTTACGT-CGAAGACAGA 852 Query 2040 GATATGGGTGACAAGTAAGATTGATGACACCACCAAAGTGGTGTCTTGGAGCAAGATCTT 2099 |||||||||||||| |||||||| ||| |||| || ||| |||| |||| |||| |||| Sbjct 853 GATATGGGTGACAAATAAGATTGGTGAGACCA--AA-GTGTTGTCGTGGATCAAGGTCTT 909 Query 2100 AGCATTGGATTTGA-GCC 2116 ||| ||||||||| ||| Sbjct 910 AGCGGTGGATTTGACGCC 927 > Ahg933273 jgi|Araly1|933273|scaffold_401261.1 Length=934 Score = 100 bits (54), Expect = 4e-20 Identities = 126/158 (80%), Gaps = 15/158 (9%) Strand=Plus/Plus Query 1981 GTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAGC--G-AGATATAAGTTCCAAGA-C 2036 |||||| |||||||||||||||||||||||||||||| | ||||| | | | |||| | Sbjct 567 GTTGTTGGAGAAGAGAAACTTTCTGTGTTATTACAGCATGCAGATACA--T-C-AAGAAC 622 Query 2037 TGAGATATGGGTGAC-AAGTAAGATTGATGACACCACCAAAGTGGTGTCT-TGGAGCAAG 2094 |||||||||||||| || |||||||||||| |||| | || || | ||||||||| Sbjct 623 AGAGATATGGGTGACGAA-TAAGATTGATGAGACCA--AG-GTTGT-TAAGTGGAGCAAG 677 Query 2095 ATCTTAGCATTGGATTTGAGCCCTCATCTTCAGATTTG 2132 ||||| || ||||||||| ||| | ||| | ||||| Sbjct 678 GTCTTAACAGTGGATTTGAAACCTGAGCTTGATATTTG 715 > Ahg930816 jgi|Araly1|930816|scaffold_303273.1 Length=847 Score = 62.1 bits (33), Expect = 2e-08 Identities = 37/39 (95%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 1817 GTGTGTCTTTGAAGGGAAATACTTACTGGTTGGCTATAG 1855 ||||||||||||||||||||||||||||||| ||| ||| Sbjct 306 GTGTGTCTTTGAAGGGAAATACTTACTGGTTTGCTTTAG 344 > Ahg948509 jgi|Araly1|948509|scaffold_800396.1 Length=197 Score = 56.5 bits (30), Expect = 9e-07 Identities = 30/30 (100%), Gaps = 0/30 (0%) Strand=Plus/Plus Query 1817 GTGTGTCTTTGAAGGGAAATACTTACTGGT 1846 |||||||||||||||||||||||||||||| Sbjct 112 GTGTGTCTTTGAAGGGAAATACTTACTGGT 141 > Ahg930838 jgi|Araly1|930838|scaffold_303295.1 Length=1166 Score = 56.5 bits (30), Expect = 9e-07 Identities = 37/40 (93%), Gaps = 2/40 (5%) Strand=Plus/Plus Query 1807 TCTGA-ACTCAGTGTGTCTTTGAAGGGAAATACTTACTGG 1845 ||||| ||| ||||||||||||||||||||||||||||| Sbjct 613 TCTGATACT-GGTGTGTCTTTGAAGGGAAATACTTACTGG 651 > Ahg930837 jgi|Araly1|930837|scaffold_303294.1 Length=702 Score = 54.7 bits (29), Expect = 3e-06 Identities = 29/29 (100%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 1817 GTGTGTCTTTGAAGGGAAATACTTACTGG 1845 ||||||||||||||||||||||||||||| Sbjct 510 GTGTGTCTTTGAAGGGAAATACTTACTGG 538 > Ahg930018 jgi|Araly1|930018|scaffold_302475.1 Length=1136 Score = 52.8 bits (28), Expect = 1e-05 Identities = 31/32 (97%), Gaps = 1/32 (3%) Strand=Plus/Plus Query 1819 GTGTCTTTGAAGGGAAATACTTACTGGT-TGG 1849 |||||||||||||||||||||||||||| ||| Sbjct 616 GTGTCTTTGAAGGGAAATACTTACTGGTGTGG 647 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94235266130 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5