BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G21160.1
Length=2083
Score E
Sequences producing significant alignments: (Bits) Value
Ahg479633 jgi|Araly1|479633|fgenesh2_kg.3__2334__AT3G21160.1 3269 0.0
Ahg474272 jgi|Araly1|474272|fgenesh2_kg.1__4226__AT1G51590.1 1714 0.0
> Ahg479633 jgi|Araly1|479633|fgenesh2_kg.3__2334__AT3G21160.1
Length=2062
Score = 3269 bits (1770), Expect = 0.0
Identities = 1979/2076 (95%), Gaps = 30/2076 (1%)
Strand=Plus/Plus
Query 20 TTCTTCTTCTCCTTTTTCAAAAATTTGTCACCTCCGAGATCAGATCTGATCGTCGGAATT 79
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1 TTCTTCTTCTCCTTTTTCAAAAATTTCTCACCTCCGAGATCTGATCTGATCGTCGGAATT 60
Query 80 GAGATGGCGAGGAATAAACTTGTAAGTGGTAGTCATGGGATATGGAAATATTTCAACCCA 139
|||||||||||||||||||||||| | | ||||||||||||||||||| ||||||||
Sbjct 61 CAGATGGCGAGGAATAAACTTGTAAAT-G--GTCATGGGATATGGAAATACTTCAACCCT 117
Query 140 GCGTTTTATCTCCGAAGACCAAGACGTCTTGCTTTGCTCATCATCCTCTTCGTCTCTGTT 199
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 118 GCGTTTTATCTCCGAAGACCAAGACGTCTTGCTTTGCTCATCATTCTCTTCTTCTCTGTT 177
Query 200 TCAATGGTTGTTTGGGATCGTCAATCTCTTTCCCGAGACTACCAGTTTGAAGTTTCCAAG 259
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 178 TCCATGGTGGTTTGGGATCGTCAATCTCTTTCCCGAGACTACCAGTTTGAAGTTTCCAAG 237
Query 260 TTAAATGAAGAAGTTTTGCGGTTGCAGCAGATGTTGGAAGAGATAAAGAGCGTCACTGAG 319
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 238 TTAAATGAAGAAGTTTTGCGGTTGCAGCAGATGTTGGAAGAGATAAAGAGCGTTACTGAG 297
Query 320 GATGTGTCTGTCAATAGTTTGAAGGATGTTCAGGAAGATCCAGTTGATGCTCAGCGAATG 379
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 GATGTGTCTGTCAAGAGTTTGAAGGATGTTCAGGAAGATCCAGTTGATGCTCAGCGAATG 357
Query 380 CAGAGAGTTAAAGAGGCAATGGTTCATGCTTGGAGTTCATATGAAAAGTATGCCTGGGGA 439
|||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 358 CAGAGAGTTAAAGAAGCAATGATTCATGCTTGGAGTTCATATGAAAAGTATGCTTGGGGA 417
Query 440 CAAGATGAGCTTCAGCCCCAGACAAAGGATGGTGTTGACAGCTTTGGTGGCCTGGGTGCA 499
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 418 CAAGATGAGCTTCAGCCCCAGACAAAAGATGGCGTTGACAGCTTTGGTGGCCTGGGTGCA 477
Query 500 ACTATGATAGATGCATTAGACACACTATATATAATGGGTCTAGATGAGCAGTTTCAGAAA 559
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 478 ACTATGATAGATGCATTAGATACACTCTATATAATGGGTCTAGATGAGCAGTTTCAGAAA 537
Query 560 GCCAGAGAGTGGGTAGCAAGCTCATTAGATTTCGACAAGGATTATGCTGCCAGTATGTTT 619
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 538 GCCAGAGAGTGGGTAGCAAGCTCATTAGATTTCGACAAGGATTATGCCGCCAGTATGTTT 597
Query 620 GAGACAACCATAAGAGTGGTAGGAGGGCTTCTCAGTGCGTATGATCTTTCTGGGGATAAA 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 GAGACAACCATAAGAGTGGTAGGAGGGCTTCTCAGTGCGTATGATCTTTCTGGGGATAAA 657
Query 680 ATTTTCCTTGAAAAGGCTATGGATATTGCAGACAGATTATTGCCTGCATGGGACACTCAA 739
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 658 ATTTTCCTCGAAAAGGCTACGGATATTGCAGACAGATTATTGCCTGCATGGGACACTCAA 717
Query 740 TCGGGTATACCATATAATATTATCAACTTGAAGCATGGAAATGCTCACAATCCTACATGG 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 TCGGGTATACCATATAATATTATCAACTTGAAGCATGGAAATGCTCACAATCCTACATGG 777
Query 800 GCGGGGGGAGACAGTATTCTTGCAGATTCTGGTACTGAGCAGCTTGAATTTATTGCCCTT 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 GCGGGGGGAGACAGTATTCTTGCAGATTCTGGTACTGAGCAGCTTGAATTTATTGCCCTT 837
Query 860 TCCCAGAGGACAGGGGACCCAAAATATCAGCAAAAGGTAGAAAAGGTTATTTCAGTGCTA 919
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 838 TCCGAGAGGACAGGGGACCCAAAATATCAGCAAAAGGTAGAAAAGGTTATTTCAGTACTA 897
Query 920 AATAAGAACTTCCCTGCTGATGGTTTACTTCCGATATATATAAATCCCGATACAGCTAAT 979
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 898 AATAAGAACTTCCCTGCTGATGGTCTACTTCCGATATATATAAATCCCGATACAGCTAAG 957
Query 980 CCATCGCAGTCTACAATAACATTTGGTGCCATGGGAGACAGCTTTTACGAATATTTGCTC 1039
|||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 CCATCGTACTCTACCATAACATTTGGTGCCATGGGAGACAGCTTTTACGAATATTTGCTC 1017
Query 1040 AAAGTTTGGGTGTTTGGGAACAAAACTTCAGCAGTGAAACACTATAGAGATATGTGGGAG 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 AAAGTTTGGGTGTTTGGGAACAAAACTTCAGCAGTGAAACACTATAGAGATATGTGGGAG 1077
Query 1100 AAGTCAATGAATGGTCTGCTAAGCTTGGTTAAGAAATCAACACCTTTGTCGTTTACATAT 1159
|| |||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||
Sbjct 1078 AAATCAATGAATGGTCTGCTAAGCTTGGTTAGGAAATCTACACCGTCGTCGTTTACATAT 1137
Query 1160 ATCTGTGAGAAGAGTGGAAATTCTTTGATCGATAA---GATGGATGAATTGGCATGCTTT 1216
||||||||||||| |||||||| | ||||||||| ||||||||||||||||||||||
Sbjct 1138 ATCTGTGAGAAGAATGGAAATT-T--GATCGATAATCAGATGGATGAATTGGCATGCTTT 1194
Query 1217 GCTCCTGGAATGTTGGCTTTAGGAGCATCTGGGTATAGTGATCCTGCTGAAGGAAAGAAG 1276
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 GCTCCCGGAATGTTGGCTTTAGGAGCATCTGGGTATAGTGATCCTGCTGAAGGAAAGAAG 1254
Query 1277 TTTCTCACACTCGCTGAAGAGCTTGCGTGGACATGTTATAACTTTTACCAATCAACTCCA 1336
|||||| ||||||| ||||||||||| ||||| |||||||||||||||||||| || |||
Sbjct 1255 TTTCTCTCACTCGCCGAAGAGCTTGCATGGACGTGTTATAACTTTTACCAATCGACACCA 1314
Query 1337 ACAAAACTGGCTGGGGAGAATTATTTCTTCAACTCTGGGAGTGACATGAGTGTTGGAACG 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 ACAAAACTGGCTGGGGAGAATTATTTCTTCAACTCTGGGAGTGACATGAGTGTTGGAACG 1374
Query 1397 TCGTGGAACATCTTGAGACCAGAAACTGTCGAATCACTGTTTTACCTCTGGCGGTTAACT 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 TCGTGGAACATCTTGAGACCAGAAACTGTCGAATCACTGTTTTACCTCTGGCGGTTAACT 1434
Query 1457 GGAAACAAGACATATCAAGAGTGGGGATGGAATATATTTGAAGCATTTGAGAAGAACTCG 1516
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435 GCCAACAAGACATATCAAGAGTGGGGATGGAATATATTTGAAGCATTTGAGAAGAACTCG 1494
Query 1517 CGCATAGAGTCTGGATATGTTGGTTTGAAGGATGTTAATACAGGCGTTAAGGACAACAAG 1576
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1495 CGCATAGAGTCTGGATATGTCGGTTTGAAGGATGTTAATACAGGCGTTAAGGACAACAAG 1554
Query 1577 ATGCAAAGTTTCTTCCTTGCAGAGACACTCAAGTATCTCTATCTACTCTTCTCGCCGACA 1636
|||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1555 ATGCAAAGCTTCTTCCTTGCTGAGACACTCAAGTATCTCTATCTACTCTTCTCGCCCACA 1614
Query 1637 ACAGTCATTCCTTTAGACGAGTGGGTATTCAACACCGAAGCTCATCCACTTAAGATTAAG 1696
||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1615 ACAGTCATTCCCTTAGACGAGTGGGTATTCAACACAGAAGCTCACCCACTTAAGATTAAA 1674
Query 1697 TCTCGAAACGATCAGGTAAATCTCAAACAATCCAACAAAGTACTGCTACGAAAACCGGCA 1756
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1675 CCCCGAAACGATCAAGTAAATCTCAAACAATCCAACAAAGTACTGCTACGAAAACCGGCA 1734
Query 1757 TTTAGAATACGCCAGAGGCATTATGGTCGGATAACAAAGAAGTAAAACTCCCTGGAGAGG 1816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1735 TTTAGAATACGCCAGAGGCATTATGGTCGGATAACAAAGAAGTAAAACTCCCTGGAGAGG 1794
Query 1817 TCACAGTGT----G---ATTC-G-T----AGGAGGGGCTCTATGGATATATCTTAACAGA 1863
|||||||| | |||| | | ||||||||||||||| |||||||||||||||
Sbjct 1795 TCACAGTGGAACCGGGCATTCTGATGTGTAGGAGGGGCTCTATGAATATATCTTAACAGA 1854
Query 1864 GCAATTGGATTTAGCTTGGCTATTCAAAGACCCTTTTATTTAAGAAACCATTTTTGGAAA 1923
| || | | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1855 GTAACAG-AGTAAGCTTGGCTATTCAAAGACCCTTTTATTTAAGAAACCATTTTTGGAAA 1913
Query 1924 GATTTCAAGATATAGACTATTGTTGTACTAGTTGGGATCAGAACCCAAACAGGTTCACCA 1983
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1914 GATTTCAAGATATAGACTATTGTTGTACTAGTTGGGATCAGAACCCAAACAGGTTTACCA 1973
Query 1984 CAGTTTACACCTTGTGTTTTGTATCCTTACTCCTTAGATTATAAATTAAGAGTATTATCT 2043
|||| |||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 1974 CAGTGTACACCTTGTGTTTTGTATCCTTA-------GATTATAAATTAAGAGTATTATTT 2026
Query 2044 TCTGTTTTGTATTCGACAAAAGATCAATGTATAAAA 2079
| |||||||||||||||||||||| |||||||||||
Sbjct 2027 TATGTTTTGTATTCGACAAAAGATTAATGTATAAAA 2062
> Ahg474272 jgi|Araly1|474272|fgenesh2_kg.1__4226__AT1G51590.1
Length=1958
Score = 1714 bits (928), Expect = 0.0
Identities = 1405/1633 (86%), Gaps = 41/1633 (3%)
Strand=Plus/Plus
Query 80 GAGATGGCGAGGAA-TAAACTTG-TAAGTGGTAGTCATGGGATATGGAAATATTTCAACC 137
|||||||||| ||| || | | | | |||||| | ||||||||||||||||||| || |
Sbjct 153 GAGATGGCGA-GAAGTAGA-TCGATTAGTGGT--T-ATGGGATATGGAAATATTTGAATC 207
Query 138 CAGCGTTTTATCTCCGAAGACCAAGACGTCTTGCTTTGCTCATCATCCTCTTCGTCTCTG 197
| |||| |||||| |||||||||||||||| |||||||| |||| ||||||||||||
Sbjct 208 CTGCGTATTATCTTAGAAGACCAAGACGTCTGGCTTTGCTTTTCATTGTCTTCGTCTCTG 267
Query 198 TTTCAATGGTTGTTTGGGATCGTCA-ATCTCTTTCCCGAG-ACTACCAGTTTGAAGTTTC 255
|||| ||| |||| ||||||||| | | |||| |||||| || | || |||||||||
Sbjct 268 TTTCTATGCTTGTCTGGGATCGT-ATAAATCTTGCCCGAGAAC-ATGAGGTTGAAGTTTT 325
Query 256 CAAGTTAAATGAAGAAGTTTTGCGGTTGCAGCAGATGTTGGAAGAG-ATAAAGAGCG-TC 313
|||||||||| |||||||| |||||| |||||||||| |||||| ||||| | | |
Sbjct 326 AAAGTTAAATGGAGAAGTTTCACGGTTGGAGCAGATGTTAGAAGAGCTTAAAG-GTGTTG 384
Query 314 ACTGAGGATGTGTCTGTCAATAGTTTGAAGGATGT-TCAGGAAGATCCAGTTGATGCT-C 371
| || ||| | || | || | | |||||||||| || ||| |||||||||||| | |
Sbjct 385 GC-GATGATAAGCCTTTGAAGAATCTGAAGGATGTCCCA-GAAAATCCAGTTGATG-TCC 441
Query 372 AGCGAATGCAGAGAGTTAAAGAGGCAATGGTTCATGCTTGGAGTTCATATGAAAAGTATG 431
|||||| ||||| ||| |||||||||||| | ||||||||||| || |||||||||||||
Sbjct 442 AGCGAAGGCAGAAAGTAAAAGAGGCAATGATCCATGCTTGGAGCTCTTATGAAAAGTATG 501
Query 432 CCTGGGGACAAGATGAGCTTCAGCC-CCAGACAAAGGATGGTGTTGACAGCTTTGGTGGC 490
| |||||| |||||||||||||||| | | ||||| ||||| ||| || |||||||||
Sbjct 502 CATGGGGAAAAGATGAGCTTCAGCCTCGA-ACAAAAGATGGCACTGATAGTTTTGGTGGC 560
Query 491 CTGGGTGCAACTATGATAGATGCATTAGACACACTATATATAATGGGTCTAGATGAGCAG 550
|| || ||||||||| ||||| | ||||| ||||| ||||||||||||||||||||||||
Sbjct 561 CTTGGAGCAACTATGGTAGATTCTTTAGATACACTCTATATAATGGGTCTAGATGAGCAG 620
Query 551 TTTCAGAAAGCCAGAGAGTGGGTAGCAAGCTCATTAGATTTCGACAAGGATTATG-CTGC 609
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| | ||
Sbjct 621 TTTCAAAAAGCCAGAGAGTGGGTAGCAAGCTCATTGGATTTCGACAAGGATTATGAC-GC 679
Query 610 CAGTATGTTTGAGACAACCATAAGAGTGGTAGGAGGGCTTCTCAGTGCGTATGATCTTTC 669
||||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||||||
Sbjct 680 CAGTATGTTTGAGACAACCATAAGAGTTGTAGGCGGACTTCTTAGTGCATATGATCTTTC 739
Query 670 TGGGGATAAAATTTTCCTTGAAAAGGCTATGGATATTGCAGACAGATTATTGCCTGCATG 729
|||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 740 TGGGGACAAAATGTTCCTTGAAAAGGCTAAGGATATTGCAGACAGATTATTGCCTGCATG 799
Query 730 GGACACT-CAATCGGGTATACCATATAATATTATCAACTTGAAG-CATGGAAATGCTCAC 787
| ||||| ||| |||||||||| || ||||| ||||||||| || ||||||||||||||
Sbjct 800 GAACACTCCAA-CGGGTATACCTTACAATATCATCAACTTG-AGAAATGGAAATGCTCAC 857
Query 788 AATCCTACATGGGC-G--GGGGGAGACAGTATTCTTGCAGATTCTGGTACTGAGCAGCTT 844
|||||| ||||||| | ||||||||||||||||||||||| || || |||||||||||
Sbjct 858 AATCCTTCATGGGCGGCAGGGGGAGACAGTATTCTTGCAGACTCCGGCACTGAGCAGCTC 917
Query 845 GAATTTATTGCCCTTTCCCAGAGGACAGGGGACCCAAAATATCAGCAAAAGGTAGAAAAG 904
|| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||
Sbjct 918 GAGTTTATTGCCCTTTCCCAAAGGACAGGGGACCCAAAATATCAGCAGAAGGTAGAGAAG 977
Query 905 GTTATTTCAGTGCTAAATAAGAACTTCCCTGCTGATGGTTTACTTCCGATATATATAAAT 964
|||||| ||| || ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct 978 GTTATTACAGAACTGAATAAGAACTTTCCTGCTGATGGTTTACTTCCCATCTATATAAAT 1037
Query 965 CCCGATACA-GCTAATCCATCGCAGTCTACAATAACATTTGGTGCCATGGGAGACAGCTT 1023
|| |||| | |||||||||||| | ||||| | ||||||||||||||||||||| |||||
Sbjct 1038 CCGGATA-ATGCTAATCCATCGTACTCTACCACAACATTTGGTGCCATGGGAGATAGCTT 1096
Query 1024 TTACGAATATTTGCTCAAAGTTTGGGTGTTTGGGAACAAAACTTCAGCAGTGAAACACTA 1083
||| || ||||||||||||||||||||| ||||||||||| || || ||||||| |||
Sbjct 1097 TTATGAGTATTTGCTCAAAGTTTGGGTGCAAGGGAACAAAACATCCGCGGTGAAACCCTA 1156
Query 1084 TAGAGATATGTGGGAGAAGTCAATGAATGGTCTGCTAAGCTTGGTTAAGAAATCAACACC 1143
|||||||||||||||||| |||||||| ||| || |||||||||| ||||||||||||||
Sbjct 1157 TAGAGATATGTGGGAGAAATCAATGAAAGGTTTGTTAAGCTTGGTCAAGAAATCAACACC 1216
Query 1144 TTTGTCGTTTACATATATCTGTGAGAAGAGTGGAAATTCTTTGATCGATAAGATGGATGA 1203
|| || ||||||||||| || ||||||| |||||| |||||| ||||||||||||||
Sbjct 1217 TTCATCATTTACATATATATGCGAGAAGAACGGAAATAATTTGATTGATAAGATGGATGA 1276
Query 1204 ATTGGCATGCTTTGCTCCTGGAATGTTGGCTTTAGGAGCATCTGGGTATAGTGATCCTGC 1263
|||||| |||||||||||||||||||||||||||||||| || ||| || || ||||
Sbjct 1277 ATTGGCGTGCTTTGCTCCTGGAATGTTGGCTTTAGGAGCTTC-AGGT-TA-TGGCCCTGA 1333
Query 1264 TGAAGGAAAGAAGTTTCTCACACTCGCTGAAGAGCTTGCGTGGACATGTTATAACTTTTA 1323
||||| ||| |||||||| ||||||||| ||||||||| ||||| ||||||||||||||
Sbjct 1334 TGAAGAAAAAAAGTTTCTTTCACTCGCTGGAGAGCTTGCCTGGACTTGTTATAACTTTTA 1393
Query 1324 CCAATCAACTCCAACAAAACTGGCTGGGGAGAATTATTTCTTCAACT-CTGGG-AGTGAC 1381
|||||| || ||||| ||||| ||||| ||||| ||||||||| ||| | ||| || |||
Sbjct 1394 CCAATCGACACCAACGAAACTCGCTGGAGAGAACTATTTCTTC-ACTGCAGGGCAG-GAC 1451
Query 1382 ATGAGTGTTGGAACGTCGTGGAACATCTTGAGACCAGAAACTGTCGAATCACTGTTTTAC 1441
|||||||||||||| || |||||||| || ||||||||||| || ||||| |||||||||
Sbjct 1452 ATGAGTGTTGGAACATCTTGGAACATTTTAAGACCAGAAACCGTTGAATCGCTGTTTTAC 1511
Query 1442 CTCTGGCGGTTAACTGGAAACAAGACATATCAAGAGTGGGGATGGAATATATTTGAAGCA 1501
|||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1512 CTCTGGCGATTAACTGGGAACAAGACATATCAAGAGTGGGGATGGAATATATTCGAAGCA 1571
Query 1502 TTTGAGAAGAACTCGCGCATAGAGTCTGGATATGTTGGTTTGAAGGATGTTAATACAGGC 1561
|||||||||||||| ||| |||| ||||||||||| || ||||||||||| ||||||||
Sbjct 1572 TTTGAGAAGAACTCTCGCGTAGAATCTGGATATGTAGGCTTGAAGGATGTGAATACAGGT 1631
Query 1562 GTTAAGGACAACAAGATGCAAAGTTTCTTCCTT-GCAGAGACACTCAAGTATCTCTATCT 1620
| ||| ||||||||||||||||| |||||| || || ||||| || ||||| || |||||
Sbjct 1632 GCTAAAGACAACAAGATGCAAAGCTTCTTC-TTAGCTGAGACTCTTAAGTACCTTTATCT 1690
Query 1621 ACTCTTCTCGCCGACAACAGTCATTCCTTTAGACGAGTGGGTATTCAACACCGAAGCTCA 1680
||||| ||||| || | || ||| | ||||||||||||| |||||||| ||||||||
Sbjct 1691 TCTCTTTTCGCCTTCATCGGTTATTTCACTAGACGAGTGGGTTTTCAACACAGAAGCTCA 1750
Query 1681 TCCACTTAAGATT 1693
||| |||||||||
Sbjct 1751 TCCGCTTAAGATT 1763
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78351633965
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5