BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT3G21210.1

Length=2762
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg930075 jgi|Araly1|930075|scaffold_302532.1                       78.7    2e-13


> Ahg930075 jgi|Araly1|930075|scaffold_302532.1
Length=424

 Score = 78.7 bits (42),  Expect = 2e-13
 Identities = 52/57 (91%), Gaps = 0/57 (0%)
 Strand=Plus/Plus

Query  991   CCACGAAGCCTGTATCGAGCCGATATCAAAGCACCCATATCATCCTAAACATGCTCT  1047
             |||| |||  || ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct  179   CCACAAAGAGTGCATCGAGCCGATATCAAAGCACCCATATCATCCTAAACATTCTCT  235



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 104214910320


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5