BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G21620.1 Length=2544 Score E Sequences producing significant alignments: (Bits) Value Ahg342312 jgi|Araly1|342312|fgenesh1_pg.C_scaffold_3002075 3546 0.0 Ahg493346 jgi|Araly1|493346|fgenesh2_kg.7__2779__AT4G15430.1 1539 0.0 Ahg338150 jgi|Araly1|338150|fgenesh1_pg.C_scaffold_2000249 555 8e-157 > Ahg342312 jgi|Araly1|342312|fgenesh1_pg.C_scaffold_3002075 Length=2271 Score = 3546 bits (1920), Expect = 0.0 Identities = 2158/2275 (95%), Gaps = 8/2275 (0%) Strand=Plus/Plus Query 188 ATGGCGACACTAACCGATATCGGAGTCGCAGCAACGATCAATATTC-TAACCGCATTTGC 246 ||||| ||||||| ||||||||||||||||||| ||||||||| || |||||||||| || Sbjct 1 ATGGCTACACTAAACGATATCGGAGTCGCAGCAGCGATCAATA-TCTTAACCGCATTCGC 59 Query 247 TTTCTTCATTGCCTTTGCGATACTTAGACTTCAACCAGTTAACGACAGAGTCTATTTCCC 306 ||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 60 GTTCTTTATCGCCTTTGCGATTCTTAGACTTCAACCAGTTAACGACAGAGTCTATTTCCC 119 Query 307 TAAATGGTATCTCAAGGGTTTAAGAAGTAGTCCTATAAAAACAGGTGGCTTTGCTAGCAA 366 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct 120 TAAATGGTATCTCAAGGGTTTAAGAAGTAGCCCTATTAAAACTGGTGGCTTTGCTAGCAA 179 Query 367 GTTTGTCAATTTGGATTTTCGATCTTACATCAGATTCTTGAATTGGATGCCTCAAGCTTT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 GTTTGTCAATTTGGATTTTCGATCTTACATCAGATTCTTGAATTGGATGCCTCAAGCTTT 239 Query 427 GAGAATGCCTGAGCCTGAACTTATTGATCATGCTGGTTTGGATTCTGTTGTCTATCTCAG 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 GAGAATGCCTGAGCCTGAACTTATTGATCATGCTGGTTTGGATTCTGTTGTCTATCTCAG 299 Query 487 GATTTACTTACTCGGGTTGAAGATCTTTTTTCCTATAGCATGTATTGCTTTCACTGTAAT 546 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 300 GATTTACTTACTTGGGTTGAAGATCTTTTTTCCTATAGCATGTATTGCTTTTACTGTAAT 359 Query 547 GGTACCGGTTAATTGGACTAACTCGACGTTGGATCAGTTAAAGAATCTAACTTTTAGTGA 606 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || Sbjct 360 GGTACCGGTTAATTGGACCAACTCGACGTTGGATCAGTTAAAGAATCTAACTTTCAGCGA 419 Query 607 TATTGATAAACTCTCTATATCGAATATACCAACTGGATCATCCAGGTTTTGGGTGCATTT 666 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 TATCGATAAACTCTCTATATCGAATATACCAACTGGATCATCCAGGTTTTGGGTGCATTT 479 Query 667 GTGTATGGCTTATGTTATTACCTTTTGGACTTGCTTTGTCCTACAACGAGAGTACAAGCA 726 |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| | Sbjct 480 GTGTATGGCTTATGTTATTACCTTCTGGACATGCTTTGTTTTACAACGAGAGTACAAGAA 539 Query 727 TATTGCTTCCATGAGGCTACAGTTTCTTGCTTCTGAGCATAGGAGACCTGACCAGTTTAC 786 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 540 TATTGGTTCCATGAGGCTACAGTTTCTTGCTTCTGAGCAAAGGAGACCTGACCAGTTTAC 599 Query 787 TGTTCTTGTAAGGAACATTCCTCCAGATCCTGATGAATCAGTAAGTGAGCTCGTTGAGCA 846 |||||||| ||||||||||||||||||||||||||||| || ||||| || |||||||| Sbjct 600 AGTTCTTGTGAGGAACATTCCTCCAGATCCTGATGAATCCGTTAGTGAACTTGTTGAGCA 659 Query 847 TTTCTTTAAGGTCAACCATCCAGACTACTACCTCACTTACCAGGCGGTCTACAACGCAAA 906 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TTTCTTTAAGGTCAACCATCCAGACTACTACCTCACTTACCAGGCGGTCTACAACGCAAA 719 Query 907 CAAGCTGTCGGAACTGGTACAGAAGAGGATGAAATTGCAGAATTGGCTTGATTACTATCA 966 ||| ||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 720 CAAACTGTCTGAATTGGTTCAGAAGAGGAAAAAATTGCAGAATTGGCTTGATTACTATCA 779 Query 967 AAACAAACACTCTAGGAATCC-ATCTAAAAGGCCTTTAATAAAGATTGGTTTCCTTGGCT 1025 ||||||||||||||||||||| | |||||||||||||||||||||| ||||| || |||| Sbjct 780 AAACAAACACTCTAGGAATCCGA-CTAAAAGGCCTTTAATAAAGATAGGTTTTCTCGGCT 838 Query 1026 GTTGGGGTGAAGAAGTTGATGCAATTGATCACTACATAGAAAAAATCGAGGGTCTAACGA 1085 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 839 GTTGGGGTGAAGAAGTTGATGCAATCGATCACTACATAGAAAAAATCGAGGGTCTAACGA 898 Query 1086 GAAAAATAAGTGAAGAGAAAGAGACAGTAATGAGCAGCACAAAATCACTCGTACCTGCAG 1145 ||||||||||||||||||| ||||| || ||||||||||||||||| || || ||||||| Sbjct 899 GAAAAATAAGTGAAGAGAAGGAGACTGTGATGAGCAGCACAAAATCGCTTGTGCCTGCAG 958 Query 1146 CTTTTGTATCCTTCAAAAAGCGTTGGGGCGCTGTTGTTTGCTCTCAAACTCAACAGTCTC 1205 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct 959 CTTTTGTATCCTTCAAAAGGCGTTGGGGCGCAGTTGTTTGCTCTCAAACTCAACAGTCAA 1018 Query 1206 GAAACCCGACAGAGTGGCTAACCGAGTGGGCTCCAGAGCCGCGAGACATATACTGGGACA 1265 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1019 GAAACCCGACAGAGTGGCTAACCGAGTGGGCTCCAGAGCCCCGAGACATATACTGGGACA 1078 Query 1266 ATCTAGCATTACCATATGTTCAGCTCACAATCCGGAGACTAGTAATAGCTGTAGCTTTCT 1325 |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct 1079 ATCTAGCATTACCATATGTTCAACTCACAATCCGAAGACTAGTAATAGCTGTGGCTTTCT 1138 Query 1326 TCTTCCTCACTTTCTTCTTCATGATCCCTATAGCTTTCGTACAGACACTCGCCAATATCG 1385 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct 1139 TCTTCCTCACTTTCTTCTTCATGATCCCTATAGCTTTCGTGCAGACACTCGCCAACATTG 1198 Query 1386 AAGGCATCGAAAAGGCTGTTCCGTTCTTGAAACCGCTTATCGAAGTGAAAACTGTAAAGT 1445 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1199 AAGGCATCGAAAAGGCTGTTCCATTCTTGAAACCGCTTATCGAAGTGAAAACGGTAAAGT 1258 Query 1446 CATTTATCCAAGGTTTTCTTCCGGGTATCGCATTGAAGATATTCCTCATTGTCCTCCCAA 1505 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 CATTCATCCAAGGTTTCCTTCCGGGTATCGCATTGAAGATATTCCTCATTGTCCTCCCAA 1318 Query 1506 GTATACTAATGCTAATGTCGAAGTTCGAAGGCTTCATAAGCAAATCTTCACTAGAAAGAA 1565 | ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1319 GCATACTTATGCTAATGTCGAAATTCGAAGGCTTCATAAGTAAATCTTCACTAGAAAGAA 1378 Query 1566 GGTGTGCAAGCAGATACTACATGTTCCAGTTCATCAACGTTTTCCTCTGTAGCATAATCG 1625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1379 GGTGTGCAAGCAGATACTACATGTTCCAGTTCATCAACGTTTTCCTCTGTAGCATAATCG 1438 Query 1626 CGGGAACTGCGCTTCAACAACTTGACAGCTTCCTAAACCAATCTGCAACCGAAATACCGA 1685 |||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| || | Sbjct 1439 CGGGGACTGCGCTTCAACAGCTTAACAGCTTCCTAAACCAATCTGCAACCGAAATCCCAA 1498 Query 1686 AGACAATTGGTGTCTCGATACCAATGAAAGCCACTTTCTTTATCACCTACATAATGGTAG 1745 ||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| | Sbjct 1499 AGACAATTGGTGTGTCGATACCAATGAAGGCCACTTTCTTTATAACCTACATAATGGTGG 1558 Query 1746 ACGGATGGGCTGGTGTTGCTGGAGAGATACTGAGGTT-AAAGCCATTGATAATATATCAT 1804 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| Sbjct 1559 ACGGATGGGCTGGTGTTGCTGGAGAGATACTGAGGTTGAAA-CCATTGATAATCTATCAT 1617 Query 1805 CTCAAGAACTTCTTCCTTGTGAAAACAGAGAAGGACAGAGAAGAAGCAATGGATCCTGGA 1864 |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| Sbjct 1618 CTCAAGAACTTCTTCCTTGTGAAAACAGAGAAAGATAGAGAAGAGGCAATGGATCCTGGA 1677 Query 1865 ACCATAGGTTTCAATACTGGTGAACCTCAGATACAACTCTACTTCATTCTTGGTCTAGTT 1924 |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 1678 ACCATAGGATTCAATACTGGTGAACCACAGATACAACTCTACTTCATTCTCGGTCTAGTT 1737 Query 1925 TACGCCGCTGTTAGCCCCATTCTCCTTCCTTTTATCCTCGTCTTCTTCGCCTTAGCTTAC 1984 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1738 TACGCCGCTGTTAGCCCCATTCTCCTTCCATTTATCCTCGTCTTCTTCGCCTTAGCTTAT 1797 Query 1985 GTGGTTTACCGTCATCAGATTATAAATGTGTATAACCAAGAGTATGAGAGTGCTGCAGCG 2044 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1798 GTGGTTTACCGTCATCAGATTATAAATGTGTATAACCAAGAGTATGAGAGTGCTGCCGCG 1857 Query 2045 TTCTGGCCAGATGTTCATAGACGTGTAGTGATTGCACTGATCGTATCTCAGCTTCTTTTG 2104 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1858 TTCTGGCCTGATGTTCATAGACGTGTAGTGATTGCACTAATCGTATCTCAGCTTCTTTTG 1917 Query 2105 ATGGGATTGCTTAGCACGAAAAAAGCTGCTCGTTCGACTCCATTGCTTTTCATACTTCCT 2164 ||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||| Sbjct 1918 ATGGGATTGCTAAGCACGAAACGAGCTGCTCGTTCGACTCCATTGCTATTCATACTGCCT 1977 Query 2165 GTGTTAACCATTGGATTCCACAAATTCTGTCAAGGACGTTACCAACCTATATTTGTCACA 2224 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 1978 GTGTTAACCATTGGATTCCACAAATTCTGTCAAGGACGTTACCAACCTATCTTTGTCAGA 2037 Query 2225 TACCCTTTACAGGATGCAATGGTTAAAGATACGTTGGAACGCATGAGAGAACCGAATTTA 2284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2038 TACCCTTTACAGGATGCAATGGTTAAAGATACGTTGGAACGCATGAGAGAACCGAATTTA 2097 Query 2285 AACTTGAAAACGTTTCTTCAAAACGCGTATGCACATCCGGTGTTTAAAGCTGCAGATAAT 2344 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 2098 AACTTGAAAACGTTTCTTCAAAACGCGTATGCACATCCGGTGTTTAAGGCTGCTGATAAT 2157 Query 2345 CTAGCTAATGAGATGGTTGTGGAGGAGCCAGCGCCCG-ATAAGACGCCGGATTTAGTGGC 2403 || || |||||||||||||| || |||||| | ||| || |||||||||||||||||| Sbjct 2158 CTGGCGAATGAGATGGTTGTAGAAGAGCCA-CATCCGGATCGGACGCCGGATTTAGTGGC 2216 Query 2404 GACTAAACGTGGCTCAAGGAGGTTTAATAGCGGCTCTGCTGAAACCTTTACTTAG 2458 ||||||||||||||| || ||| | ||||||||||||||||||||||||| ||| Sbjct 2217 GACTAAACGTGGCTCGAGAAGGCTGCATAGCGGCTCTGCTGAAACCTTTACATAG 2271 > Ahg493346 jgi|Araly1|493346|fgenesh2_kg.7__2779__AT4G15430.1 Length=2511 Score = 1539 bits (833), Expect = 0.0 Identities = 1721/2139 (80%), Gaps = 103/2139 (5%) Strand=Plus/Plus Query 186 TCATGGCGACACTAACCGATATCGGAGTCGCAGCAACGATCAATATTCTAACCGCATTTG 245 ||||||| ||| ||| |||||| ||||| |||||| | |||||||| | || ||||| | Sbjct 72 TCATGGCTACAATAAACGATATTGGAGTAGCAGCAGCAATCAATATAGTCACAGCATTAG 131 Query 246 C-TTTCTTCATT-GCCTTTGCGATACTT-A-GACTTCAACCAGTTAACGACAGAGTCTAT 301 | |||| || || || ||||| ||| || | || |||||||||| || |||||||||||| Sbjct 132 CTTTTC-TC-TTAGCTTTTGCTATA-TTCAGGA-TTCAACCAGTAAATGACAGAGTCTAT 187 Query 302 TTCCCTAAATGGTATCTCAAGGGTTTAAGAAGTAGTCCTATAAAAACAGGTGGCTTTGCT 361 ||||||||||||||||||||||| |||||||||||| ||||| |||| |||||||||| | Sbjct 188 TTCCCTAAATGGTATCTCAAGGGCTTAAGAAGTAGTTCTATACAAACTGGTGGCTTTGGT 247 Query 362 AGCAAGTTTGTCAATTTGGATTTTC-GATCTTACAT-CAGATTC-TTGAATTGGATGCCT 418 ||||| || |||| ||||| || | |||| || || | | ||| || |||||||||||| Sbjct 248 AGCAAATTCATCAACTTGGACTT-CAGATCCTATATTC-GTTTCCTT-AATTGGATGCCT 304 Query 419 CAAGCT-TTGAGAATGCCTGAGCCTGAACTTATTGATCATGCTGGTTTGGATTCTGTTGT 477 |||| || | |||||| || ||||| || | ||||| ||||| | ||||||||||| Sbjct 305 GAAGCACTTAA-AATGCCAGAACCTGAGCTCGTCGATCACGCTGGACTCGATTCTGTTGT 363 Query 478 CTATCTC-AGGATTTACTTACTCGGGTTGAAGATCTTTTTTCCTATAGCATGTATTGCTT 536 ||| || ||||| |||||||||||| | ||||||||||| |||||||| ||| |||||| Sbjct 364 CTA-CTTGAGGATCTACTTACTCGGGCTCAAGATCTTTTTCCCTATAGCTTGTGTTGCTT 422 Query 537 TCACTGTAATGGTACCGGTTAATTGGACTAACTCGACG-TTGGATCAGTTAAAGA-AT-C 593 | || | |||||| || ||||||||||| ||| | | ||||||| ||||| || || | Sbjct 423 TTACGGCAATGGTTCCTGTTAATTGGACAAACAAGG-GATTGGATCGGTTAA-GACATTC 480 Query 594 TAAC-T---TTT-AGTGATATTGATAAACTCTCTATATCGAATATACCAACTGGATCATC 648 ||| | ||| ||||||||||||||||||||| |||| |||||||||| ||| ||| | Sbjct 481 TAATATAAGTTTCAGTGATATTGATAAACTCTCTTTATCAAATATACCAAATGGCTCA-C 539 Query 649 C-AGGTTTTGGGTGCATTTGTGTATGGCTTATGTTATTACCTTT-TGGACTTGCTTTGTC 706 | || |||||||||||||||||||||||||||| ||| || ||| ||||| |||||| || Sbjct 540 CTAGATTTTGGGTGCATTTGTGTATGGCTTATGCTATCAC-TTTCTGGACATGCTTTATC 598 Query 707 CT-ACAACGAGAGTACAAGCATATTGCTTCCATGAGGCTACAGTTTCTTGCTTCTGAGCA 765 || | || |||||||| || |||| |||| ||||| |||||||||||||| ||| || Sbjct 599 CTGAAAA-GAGAGTACCAGAATATAGCTTTAATGAGACTACAGTTTCTTGCAAATGATCA 657 Query 766 TAGGAGACCTGACCAGTTTACTGTTCTTGTAAGGAACATTCCTCCAGATCCTGATGAATC 825 ||||||||| ||||||| ||||| || ||||| ||||||||| |||||||| ||||||| Sbjct 658 AAGGAGACCTAACCAGTTCACTGTGCTGGTAAGAAACATTCCTTCAGATCCTCATGAATC 717 Query 826 AGTAAGTGAGCTCGTTGAGCATTTCTTTAAGGTCAACCATCCAGA-CTACTACCTCACTT 884 | || |||| || ||||| |||||||| || |||||||||||||| | |||||||||||| Sbjct 718 AATATGTGAACTTGTTGAACATTTCTTCAAAGTCAACCATCCAGATC-ACTACCTCACTT 776 Query 885 ACCAGGCGGTCTACAACGCAA-ACAAGCTGTCGGAACTGGTACAGAAGAGGA-TGAAATT 942 |||||| ||| || | |||| | || || || ||| |||| | || ||||| | |||| Sbjct 777 TCCAGGCAGTCCACGATGCAACAAAA-CTCTCCGAATTGGTTCTGACGAGGAATCAAAT- 834 Query 943 GCAGAAT-TGGCTTGATTACTATCA-AAACAAACAC-TCTAGGAATCCATCTAAAAGGCC 999 ||||||| || ||||||||| || | |||||||||| | ||||||| |||||| ||||| Sbjct 835 GCAGAATCTG-CTTGATTACAAT-ATAAACAAACACATG-AGGAATCAATCTAACAGGCC 891 Query 1000 TTTAATAAAGATTGG-TTTCCTTGGCTGTTGGGGTGAAGAAGTTGATGCAATTGA-TCAC 1057 |||||||||| || |||| ||||||| || |||||||||| ||||| ||| | | | Sbjct 892 AGTAATAAAGATGGGATTTC-TTGGCTGCTGTGGTGAAGAAGCTGATGGAATCAAAT-AT 949 Query 1058 TACATAGAAAAAA-TCGAGGGTCTAACGAGAAAAATAAG-TGAAGAGAAAGAGACAGT-A 1114 |||| | ||||||||||||| ||| ||||| | ||| || ||| ||| || | Sbjct 950 TACAC-GTCCGTCGTCGAGGGTCTAACAAGAGAAATA-GCTGAGGAAAAACAGAG-GTTA 1006 Query 1115 ATGAGCAGCACAAAATC-ACTCGTACCTGCAGCTTTTGTATCCTTCAAAAAGC-GTTGGG 1172 | || | ||||||| || | | || ||||| ||||||||||| ||||| | || |||||| Sbjct 1007 AGGACCGGCACAAAGTCCA-TAGTGCCTGCGGCTTTTGTATCTTTCAAGA-GCCGTTGGG 1064 Query 1173 GCGCTGTTGTTTGCT-CTCAAACTCAACAGTCTCGAAACCCGACAGAGTGGCTAACCGAG 1231 | || | ||||| | ||||||||||||| | ||||||| ||||| |||||||||||| Sbjct 1065 GAGCAGCGGTTTG-TGCTCAAACTCAACAAACAAGAAACCCAACAGAATGGCTAACCGAG 1123 Query 1232 TGGGCTCCAGAGCCGCGAGACATATACTGGGACAATCTAGCATTACCATATGTTC-AGCT 1290 |||||| ||||||| || ||||| |||| |||||||| ||||| |||||||| | | || Sbjct 1124 TGGGCTGCAGAGCCACGTGACATCTACTATGACAATCTGGCATTGCCATATGT-CGACCT 1182 Query 1291 CACA-ATCCGGAGACT-AGTAATAG-CTGTAGCTTTCTTCTTCCTCACTTTCTTCTTCAT 1347 | | || || | || | || | | | || || | |||||||||||| ||||||||||| Sbjct 1183 TA-AGATAAGGCGGCTCA-TAGTCGGC-GTCGCATACTTCTTCCTCACCTTCTTCTTCAT 1239 Query 1348 GATCCCTATAGC-TTTCGTACAGACACTCGCCAATATCGAAGGCATCGAAAAGGCTGTTC 1406 ||| || ||||| ||| |||||| |||| ||||| ||||||||||| || |||||| ||| Sbjct 1240 GATACCAATAGCATTT-GTACAGTCACTTGCCAACATCGAAGGCATAGAGAAGGCTTTTC 1298 Query 1407 CGTTCTTGAAACCGCTTATCGAAGTGAAAACTGT-AAAGTC-ATTTATCCAAGGTTTTCT 1464 | |||||||| || ||||| ||||||||| ||| |||||| || ||||||||||| || Sbjct 1299 CTTTCTTGAAGCCCCTTATAGAAGTGAAAT-TGTTAAAGTCGATC-ATCCAAGGTTTCCT 1356 Query 1465 TCCGGGTATCGCATTGAAGATATTCCTCATTGTCCTCCCAAGTATACTAATGCTAATGTC 1524 ||| || ||||| |||||||| |||||| || |||||||||| ||||| |||| |||||| Sbjct 1357 TCCCGGAATCGCTTTGAAGATCTTCCTCCTTTTCCTCCCAAGAATACTGATGCAAATGTC 1416 Query 1525 GAAGTTCGAAGGCTTCATAAGCAAATCTTCACTAGAAAGAAG-GTGTGCAAGC-AGATAC 1582 || |||||||| || | |||| ||| ||| |||||||||| | |||| | |||| | Sbjct 1417 CAAATTCGAAGGTTTTGTCAGCACATCCTCATTAGAAAGAAGAGCC-GCAA-CTAGATTC 1474 Query 1583 TACATGTTCCAGTTCATCAACGTTTTCCTCTGTAGCATAATCGC-GGGAACTGCGCTTCA 1641 |||||||||||||||||||| ||||||||| | |||||| || | |||| ||||| |||| Sbjct 1475 TACATGTTCCAGTTCATCAATGTTTTCCTCGGAAGCATAGTCACCGGGA-CTGCGTTTCA 1533 Query 1642 ACAACTTGACAGCTTCCTAAACCAATCTGCAACCGAAATACCGAAGACAATTGGTGTCTC 1701 ||| || |||| ||||| ||||| ||||||| ||| || || || |||||||||||||| Sbjct 1534 ACAGCTCAACAGTTTCCTTAACCAGTCTGCAAACGATATTCCAAAAACAATTGGTGTCTC 1593 Query 1702 GATACCAATGAAAGCCACTTTCTTTATCACCTACATAATGGTAGACGGATGGGCTGGTGT 1761 ||| ||||||||||| || |||||||| || ||||||||||| || |||||||||||||| Sbjct 1594 GATTCCAATGAAAGCGACCTTCTTTATAACATACATAATGGTTGATGGATGGGCTGGTGT 1653 Query 1762 TGCTGGAGAGATACTGAGGTTAAAGCCATTGATAATATATCATCTCAAGAACTTCTTCCT 1821 |||||| |||||| ||||||| |||||| | ||||| |||||||| ||||||| |||||| Sbjct 1654 TGCTGGGGAGATATTGAGGTTGAAGCCACTCATAATCTATCATCTAAAGAACTCCTTCCT 1713 Query 1822 TGTGAAAACAGAGAAGGACAGAGAAGAAGCAA-TGGATCCTGGAACCATAGGTTTCAATA 1880 |||| ||| ||||| || || |||||||||| || |||||||||||||||| ||||| | Sbjct 1714 CGTGAGAACCGAGAAAGATAGGGAAGAAGCAACTG-ATCCTGGAACCATAGGATTCAACA 1772 Query 1881 CTGGTGAACCTCAGATACAACTCTACTTCATTCTTGGTCTAGTTTACGCCGCTGTTAGCC 1940 ||||||| ||||| ||||||||||||||| |||||||||| |||||||| || ||||||| Sbjct 1773 CTGGTGAGCCTCAAATACAACTCTACTTCCTTCTTGGTCTTGTTTACGCAGCAGTTAGCC 1832 Query 1941 CCATTCTCCTTCCTTTTATCCTCGTCTTCTTCG-CCTTAGCTTACGTGGTTTACCGTCAT 1999 |||| || || || ||||||||||||||||||| ||| |||| ||| || ||||||||| Sbjct 1833 CCATCCTTCTCCCCTTTATCCTCGTCTTCTTCGGCCTG-GCTTTCGTAGTGTACCGTCAT 1891 Query 2000 CAGATTATAAATGTGTATAACCAAGAGTATGAGAGTGCTGC-AGCGTTCTGGCCAGATGT 2058 ||| |||||||||||||||| ||| ||||||| ||||| | | ||||||||| || || Sbjct 1892 CAGGTTATAAATGTGTATAATCAAAAGTATGAAAGTGCAGGGAA-GTTCTGGCCTGACGT 1950 Query 2059 TCATAGACGTGTAGTGATTGCACTGATCGTATCTCAGCTTCTTTTGATGGGA-TTGCTTA 2117 ||| || ||||| |||| |||||| | || || ||||| || |||||||| || || | Sbjct 1951 TCACAGGCGTGTTGTGACCGCACTGGTTGTTTCGCAGCTGCTCTTGATGGGTCTT-CTAA 2009 Query 2118 GCACGAAAAAAGCTGCTC-GTTCGACTCCATTGCTT-TTCATACTTCCTG-TGTTAACCA 2174 |||| ||| | ||| || || | |||||||| || || | ||||| | || | |||| Sbjct 2010 GCACCAAACACGCTTCTAAGTCC-ACTCCATTTCTGCTTG-TGCTTCC-GCTGCTGACCA 2066 Query 2175 TTGGATTCCACAAATTCTGTCAAGGA-CGTTACCAACCTA-TATTTGTCACATACCCTTT 2232 | || |||||||| ||| ||| | |||||||||||| | ||||| |||||||| || Sbjct 2067 TCGGGTTCCACAAGCACTG-CAAAAATCGTTACCAACCTGCT-TTTGTAACATACCCGTT 2124 Query 2233 ACAG--G-ATGCAATGGTTAAAGATACGTTGGAACGCAT 2268 |||| | | || ||| | |||||||| |||| ||||| Sbjct 2125 ACAGCAGGAAGCTATGATCAAAGATACACTGGACCGCAT 2163 > Ahg338150 jgi|Araly1|338150|fgenesh1_pg.C_scaffold_2000249 Length=2337 Score = 555 bits (300), Expect = 8e-157 Identities = 1473/2020 (73%), Gaps = 158/2020 (8%) Strand=Plus/Plus Query 188 ATGGCGACACTAACCGATATCGGAGTCGCAGCAACGATCAATATTCTAACCGCATTTGCT 247 ||||||||| || | ||||| ||||| |||||| |||| |||||||||| || |||| | Sbjct 1 ATGGCGACATTAGCAGATATTGGAGTAGCAGCAGCGATTAATATTCTAAGTGC-TTTGAT 59 Query 248 TTCTTC-ATTGC-CTTTGCGATACTT-A-GACTTCAACCAGTT-AACGACAGAGTCTATT 302 | ||| ||||| ||||| || ||| | || | |||||| || || || || || |||| Sbjct 60 AT-TTCTATTGCTATTTGCAAT-CTTGAGGA-TCCAACCA-TTCAATGATAGGGTTTATT 115 Query 303 TCCCTAAATGGTATCTCAAGGGT-TTAAGAAGTAGTCCTATAAAAACAGGTGGCTTTGC- 360 ||||||||||||| || || ||| || ||||| || || | || | ||| ||||| | Sbjct 116 TCCCTAAATGGTACCTAAAAGGTGTT-AGAAGCAGCCCGGTGAATTCGGGT-GCTTT-CG 172 Query 361 T-AGCAAGTTTGTCAATTTGGATTTTCGATCTTAC-ATCAGATTCTTGAATTGGATG-CC 417 | |||||| || | |||||||| |||||||| ||| || | || || ||||||||| || Sbjct 173 TGAGCAAGATTATGAATTTGGACTTTCGATCATACGTTC-GGTTTTTAAATTGGATGCCC 231 Query 418 TCAAGCTTTG-AGAATGCCTGAGCCTGAACTTATTGATCATGCTGGTTTGGATTCTGTTG 476 | |||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 232 GC-CGCTTTGAAG-ATGCCAGAGCCTGAACTTATTGATCATGCTGGTTTGGATTCTGCTG 289 Query 477 TCTATCTC-AGGATTTACTT-ACTCGGG-TTGAAGATCTTTTTTCCTATAGCATGTATTG 533 | || || ||||||||||| | | ||| || ||||||||| | || || |||| || Sbjct 290 TTTA-CTTGAGGATTTACTTGA-TAGGGCTT-AAGATCTTTGTCCCGATCGCAT-TA--- 342 Query 534 CTTTCACTG-T--A-A-TGGTACCGGTTAATTGGACTAACTCGACG--TTGGATC-AGTT 585 |||||| || | | | | ||||| || |||||||| | | || | ||| | | || Sbjct 343 CTTTCA-TGGTCGATACTAGTACCTGTCAATTGGACCAG-T-GATGGATTGCAGCTAGCA 399 Query 586 AAA----G-AATCTAACTTTTAGTGATATTGATAAACTCTCTATATCGAATATACCAAC- 639 ||| | ||| | || | ||| |||| ||||| || || || || ||| | | ||| Sbjct 400 AAACTTCGTAATGTGACATCAAGTAATATCGATAAGCTTTCGATTTCAAATGT-CGAACG 458 Query 640 TGGATCATCCAGGTTTTGGGTGCAT-TTGTGTATGGCTTATGTTATT-ACCTTTTGGACT 697 ||||||| ||||||||||| ||| ||||| |||||||||| ||| || ||||||||| Sbjct 459 TGGATCAGACAGGTTTTGGGCACATCTTGTG-ATGGCTTATGC-ATTCACATTTTGGACT 516 Query 698 TGCTTTGTCCTAC--AACGAGAGTACAAGCATATTGCTTCCATGAGGCTA-CAGTTTCTT 754 |||| ||| ||| || || | || || | |||||| | ||| || || | ||||| Sbjct 517 TGCTATGTTCTAATGAAGGA-A-TATGAGAAAATTGCTGCAATGCGGTTATCT-TTTCTC 573 Query 755 GCT-TCTGAGCATAG-GA-GAC-CTGACCAGTTTACTGTTCTTGTAAGGAACATTCCTCC 810 | || ||| | || || | | |||| || || |||||||| || |||||| | || || Sbjct 574 -CAATCCGAG-A-AGCGACG-CGCTGATCAATTCACTGTTCTGGTTAGGAACGTACCACC 629 Query 811 AGA-TCCTGATGAATCAGTAAGTGAGCTCGTTG-AGCATTTCTTTAAGGTCAACCATCCA 868 || || || || ||| | || || ||| | ||||||||||| || ||||| || Sbjct 630 GGACTCA-GACGAGTCAATTAGGGAAAACGT-GCAGCATTTCTTTCTTGTTAACCACCCG 687 Query 869 GACTACTACCTCACTTACCAGGCGGTCTACAACGCAAAC-AAGCTGTCGGAACTGGTACA 927 ||| | || || || | |||| ||| ||||| ||||| || || | |||||||| Sbjct 688 GACCATTATCTTACACATCAGGTGGTGTACAATGCAAATGAAT-TGGCTAAACTGGTA-- 744 Query 928 GAAGAG--GATGAAATTGCAGAATTGGCTT-GATTACTATCAAAACAAACACTCTAGGAA 984 |||||| || |||| ||||||||||| || |||||||| || || | || || || Sbjct 745 GAAGAGAAGAAGAAAATGCAGAATTGG-TTAGATTACTACCATTTGAAGTATTCAAGAAA 803 Query 985 TCCATCTA-AAAGGCCTTTAATAAAGATTGG--TTTCCTTGG-CTGTTGGGGTGAAGAA- 1039 | | | ||||||| ||||| |||| |||| | || || | |||| ||||| Sbjct 804 -CAAGGAACAAAGGCCACGGGTAAAG-TTGGGATTTC-TCGGGCTAT-GGGGA-AAGAAA 858 Query 1040 GTTGATGCAATTGATCACTACATAGAAAAAATCGAGGGTCTAA-CGAGAAAAATAAGTG- 1097 || |||||||| ||||| |||| || | |||||| |||| |||| ||| ||| || Sbjct 859 GTAGATGCAATGGATCATTACACAGCTGAGATCGAGAAACTAAGCGAGCAAA-TAA-TGG 916 Query 1098 AAGAGA--AAGAGACAGTAATGA--GCA-GCACAAAA-TC-ACTCGTACCTGCAGCTTTT 1150 |||| | |||||| | ||| || | | | |||||| | | | | || |||||||| Sbjct 917 AAGAAAGGAAGAGA-A-TAAAGAAAG-ATG-ACAAAAGTGTAAT-G--CCAGCAGCTTTC 969 Query 1151 GTATCCTTCAAAAAGCGTTGGGGCGCTGTTGTTTGCTCTCAAACTCAACAGTCTC-GAAA 1209 || || || |||| |||||||||||||| || ||| | || || |||||| | ||| Sbjct 970 GTGTCTTTTAAAACGCGTTGGGGCGCTGCAGTCTGCGCACAGACACAACAGACGAAGAAT 1029 Query 1210 CCCGACAGAGTGGCTAACCGAGTGGGCTCCAGAGCCGCGAGACATATACTGGGACAATCT 1269 || || || ||| ||||||| |||||||| ||| | |||| || |||||||| ||||| Sbjct 1030 CCA-ACGGAATGGTTAACCGAATGGGCTCCCGAGGCAAGAGAAATGTACTGGGAAAATCT 1088 Query 1270 AGCATTACCATATGT-TCAGCTCACAATCCGGAGACTAGTAATAGCTG-TAGCTTTCTTC 1327 ||| | || || | || ||||| | ||||| | ||||| || | || |||||| Sbjct 1089 CGCAATGCCTTACGCATCT-CTCACTTTAAGGAGATTTGTAAT-GCACATTGCCTTCTTC 1146 Query 1328 TTCCTCACTTTCTTCTTCATGATCCCTATAGC-TTTCGTACAGA-CACTC-GCCAATATC 1384 |||||||| ||||| ||||| ||||| || || ||| || || | | || || | ||| Sbjct 1147 TTCCTCACATTCTTTTTCATCATCCCAATCGCATTT-GTGCA-ATC-CTTAGCGAGTATT 1203 Query 1385 GAAGGCATCGA-AAAGGCTGTTCCGTTCTTGAAACCGC-TTATCGAAGTGAAAACTGT-A 1441 ||||| ||| | ||| | | ||||||| | | || | || ||||| ||| | | | Sbjct 1204 GAAGGTATCCAGAAATCC-GCTCCGTTCCTCAGTCC-CATTGTCGAAAAGAAGTTTATGA 1261 Query 1442 AAGTCATTTATCCAAGGTTTTCTTCCGGGTATCGCATTGAAGATATTCCTCAT-TGTCCT 1500 || ||||| ||||||||||||||||| ||||| | |||||| | || | || | || | Sbjct 1262 AA-TCATTGATCCAAGGTTTTCTTCCCGGTATTGTTTTGAAGCTCTTTTTGATATTTC-T 1319 Query 1501 CCCAAGTATACTAATGCTAATGTCGAAGTTCGAAGGCTTCATAAGCAA-ATCTTCACTAG 1559 |||| || | ||| | |||||||| |||||||| || || ||| ||| || ||| Sbjct 1320 ACCAACAATTTTGATGATCATGTCGAAATTCGAAGGGTTTATTT-CAATATCATCGTTAG 1378 Query 1560 AAAGAAG-GTGTGCAAG-CAGATACTACATGTTCCAG-TTCATCAACGTTTTCCTCTGTA 1616 | ||||| | | || | ||||||| || ||| | || | || ||||||||| ||| Sbjct 1379 AGAGAAGAGCG-GCTTTTC-GATACTATATTTTCAACCTTG-TGAATGTTTTCCTCGGTA 1435 Query 1617 GCATAATCGCGGGAACTGCGCTTCAACAACTTGACAGCTTC-CT-AAACCAATCTGCAAC 1674 |||||||| | ||| |||| || |||| || || ||| || |||| |||| |||| Sbjct 1436 GCATAATCACTGGATCTGCATTTGAACAGCTCGATT-CTTTTCTTAAAC-AATCCGCAAA 1493 Query 1675 CGAAATACCGAAGACAATTGGTGTCTCGATACCAATGAAAGCCACTTTCTTTATCACCTA 1734 ||| || ||| |||| |||| || ||||||| || ||||| || |||||||| || || Sbjct 1494 CGACATTCCGCGGACAGTTGGAGTAGCGATACCGATAAAAGCAACCTTCTTTATAACATA 1553 Query 1735 CATAATGGTAGACGGATGGGCTGGTGTTGCTGGAGAGATACTGAGGTT-AAAGCCATT-G 1792 |||||||||||||| ||||| ||||| || ||||| || | ||| | ||| ||||| | Sbjct 1554 TATAATGGTAGACGGTTGGGCGGGTGTGGCCGGAGAAATTTTTAGGCTGAAA-CCATTAG 1612 Query 1793 ATAATATATC-ATCTCAAGAACTTCTTCCTTGTGAAAACAGAGAAGGACAGAGAAGAAGC 1851 | || | || || | |||||||||||| |||||||||| || ||||||||||||||||| Sbjct 1613 -TCATTT-TCCATTTAAAGAACTTCTTCTTTGTGAAAACTGAAAAGGACAGAGAAGAAGC 1670 Query 1852 AATGGATCCTGGA-ACCATAGGTTTCAATACTGGTGAACCTCAGATACAACTCTACTTCA 1910 |||||||| ||| | || | |||| | || || |||| ||| ||||| || ||| Sbjct 1671 TATGGATCCGGGACAG-ATCGATTTCTACGCTACAGAGCCTCGGATTCAACTATATTTCC 1729 Query 1911 TTCTTGGTCTAGTTTACGC-CGCTGTTA-GCCCCATTCTCCTTCCTTTTATCCTCGTCTT 1968 | ||||| || || ||||| | | || | ||| |||| |||||||| ||| || |||| Sbjct 1730 TCCTTGGCCTTGTCTACGCTC-CGGTCACGCCTG-TTCTACTTCCTTTCATCATCTTCTT 1787 Query 1969 CTTCGCCTTAGCTTACGTGGT-TTACCGTCATCAGATTATAAATGTGTATAACCAAGA-G 2026 ||||| || || ||| | || || |||||||||||| ||||||||||| | || || | Sbjct 1788 CTTCGGTTTCGCCTACCTCGTCTT-CCGTCATCAGATCATAAATGTGTACGATCA-GAAG 1845 Query 2027 TATGAGAGTGCTGCAGCGTTCTGGCCAGATGTTCATAGACGTGTAGTGATTG-CACTGAT 2085 |||||||| || || || |||||||| || |||||| ||||| || | || | || |||| Sbjct 1846 TATGAGAGCGCGGCTGCATTCTGGCCTGACGTTCATGGACGTATAAT-ATCGGCATTGAT 1904 Query 2086 CGTATCTCAGCTTCTTTTGATGGGATTGCTTAGCACGAAA 2125 | | || || |||||||| ||||||| | ||||||||| Sbjct 1905 CATCTCACAAATTCTTTTGTTGGGATTAATGAGCACGAAA 1944 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 95911236910 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5