BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G22142.1
Length=4443
Score E
Sequences producing significant alignments: (Bits) Value
Ahg905237 jgi|Araly1|905237|Al_scaffold_0003_2365 640 0.0
> Ahg905237 jgi|Araly1|905237|Al_scaffold_0003_2365
Length=2169
Score = 640 bits (346), Expect = 0.0
Identities = 1190/1589 (75%), Gaps = 91/1589 (6%)
Strand=Plus/Plus
Query 2881 GCAACTTCACC-AGTTGCAACTCCTCCTATTGCAAAACCTCC-AACGACAACACCGCCCA 2938
|||||| | || | |||| ||||||||||| ||||| || || | | || ||||||||
Sbjct 148 GCAACTCCTCCTA-TTGCTACTCCTCCTATCGCAAAGCCACCTATC-ACTACACCGCCTG 205
Query 2939 CCGCAACTCCACCTGTTGCAATGCCACCAATAGCAACTCCACCTACCGCAAAACCGCCTG 2998
|||||||||||| |||||| |||||| | ||||| || || ||||||| ||| || |
Sbjct 206 TTGCAACTCCACCTATTGCAAAACCACCAGTTGCAACACCGCCAACCGCAACACCACCAG 265
Query 2999 TTGCAACTCCACCTATAGCAAATCCACCTGTAGAAAAACCGCCGGTTGCAACACCGCCAA 3058
| |||||||||||||| || || ||||| |||| || || || |||||||| || || |
Sbjct 266 TAGCAACTCCACCTATCGCTAAGCCACCCGTAGCAACCCCACCAGTTGCAACGCCACCTA 325
Query 3059 TCGCAAAACCGCCCA-CTGT-ACTGCCACCTATTGCAAAACCACC-AGTTGAAACATCGC 3115
| ||||| || ||| |||| || ||||||||||||| || || | ||| |||| |||
Sbjct 326 TAGCAAAGCC-ACCAGCTGTAAC-ACCACCTATTGCAACTCCTCCTA-TTGCAACACCGC 382
Query 3116 CCACCGCAACACCTCCAACCGCAACTCCACCTGTTGCAATTCCTCCTGTTGTAAAACCAC 3175
| | |||||||| || | |||||||| |||||| ||| || ||||||| || |||||
Sbjct 383 CTATTGCAACACCACCTATTGCAACTCCGCCTGTTTCAAAGCCACCTGTTGCAACACCAC 442
Query 3176 CGGTTGCTATACCTCCCATTACAAAACCACCGGTTGCAACACCACCAGTAACAAATCCAC 3235
| ||||| | | | || | | ||| |||| ||||||||| ||| |||||
Sbjct 443 CAGTTGC-A-A-C-ACC---GC----CAACC----GCAATGCCACCAGTAGCAACTCCAC 487
Query 3236 CTACCGC-AATGCCACCAATCGTTACGCCGCCTCCTATCGTAACTCCTCCTATTGCAAAA 3294
||| ||| || ||| || | || |||||||| | | | | ||| || |||||||||||
Sbjct 488 CTATCGCTAA-GCCGCCTGTTGTAACGCCGCC-CGT-T-GCAACCCCGCCTATTGCAAAG 543
Query 3295 TCACC-GATCGCAACTCCACCTGTTTCTACTCCTCCTATCGCAAAGCCACCTATCGCAAC 3353
|||| | | ||||| |||||| || | ||||| ||| | |||||||||| | |||||
Sbjct 544 CCACCTG-TTGCAACACCACCTATTGCAACTCCGCCTGTTTCAAAGCCACCGGTTGCAAC 602
Query 3354 ACCGCCTGTTGCAACTA-CGCCCATTGCAAAACCACCAATTGCAACACCACCCACCGCAA 3412
||| || |||||||| | | |||| ||| |||||| | ||||| ||||| | ||| |
Sbjct 603 ACCACCAGTTGCAAC-ACCACCCACCACAATGCCACCAGTAGCAACTCCACCTATCGCTA 661
Query 3413 ATCCACCTGTTGCAAATCCTCCTATCGCAAAGTCACCTATTGCAAAGCCACCAATTGCAA 3472
| || |||||||||| || || | |||| | ||||||||||||||||| ||||||
Sbjct 662 AGCCGCCTGTTGCAACGCCGCCCGTTGCAACCCCGCCTATTGCAAAGCCACCTGTTGCAA 721
Query 3473 CACCCCCCACCGCAA-TGCCATCAATAGCAACTCCACCTATCGGTAA-GCCGCCTGTTGC 3530
|||| || | |||| | || | | ||| ||||| | | || || || |||||
Sbjct 722 CACCACCTATTGCAACT-CCGCCTGTTTCAAAGCCACCGGT-TGCAACACCACCAGTTGC 779
Query 3531 AACCCCGCCCATGGCA-AA-GCCACCAGTTGCAAGTCCACCAATTGC-AACACCTCCAAT 3587
||| ||||||| || || ||||||||| |||| |||||| || || || || || |
Sbjct 780 AACACCGCCCA--CCATAATGCCACCAGTAGCAACTCCACCTATCGCTAA-GCCGCCTGT 836
Query 3588 CATAAAACCACCAGTCGCAACTCCTCCAATCACAAAACCGCCGGTTGCAACTCCACCAGT 3647
|| || ||||| ||||| || || || |||| || || | ||||| ||||| ||
Sbjct 837 TGCAACGCCGCCAGTTGCAACCCCACCTATTGCAAAGCCACCCATAGCAACCCCACCGGT 896
Query 3648 AGCAACTCCTCCTATCGCAAAGCCA-CCAGTCGCAACGTCGCCTATTG-AAACTCCGCCC 3705
|||||||||||||||||||||||| ||| ||||||| | ||||||| ||| || |||
Sbjct 897 TGCAACTCCTCCTATCGCAAAGCCACCCA-TCGCAACACCACCTATTGCAAA-GCCACCC 954
Query 3706 GTGGCAAAACCACCAGTTACAACTCCACCTGTAGCAACTCCTCCCATCGTAAAACCACCT 3765
|| |||| ||||||||| ||||||| ||| | |||| || ||||||| || |||||||
Sbjct 955 GTAGCAACCCCACCAGTTGCAACTCCTCCTATCGCAAAGCCACCCATCGCAACACCACCT 1014
Query 3766 ATTGTGACA-CCGCCTATTGCAACTCCACCCATC-GCAAAGTCACCAATCGCGCCGCCGC 3823
|||| | | || |||| |||||||| || | | ||| |||| | ||| | ||||
Sbjct 1015 ATTG-CAAAGCCACCTACCGCAACTCCTCCTA-CTTCAATCCCACCTGTAGCGACACCGC 1072
Query 3824 CTATTGGTACTCCTCCTA-TTGCAAAACCACCAGTTGCGACACCACCAACCGCAACTCCA 3882
| || |||||||| | |||||| ||| ||| || || || ||| |||| |||
Sbjct 1073 CAATCACAACTCCTCC-AGTTGCAACACCGCCAACCGCAACTCCTCCAGTTGCAAAACCA 1131
Query 3883 CCTGTTGCTACTTCTCCTATAGCAAAACCACCTGTTGCAACGCCGCCACCT-GCAACTCC 3941
|| || ||||| | ||| | || || ||||| |||| || ||| | ||||| ||
Sbjct 1132 CCCGTCGCTACACCGCCTGTTGCTTCTCCGCCTGTCGCAAAACCACCA-ATGGCAACACC 1190
Query 3942 GCCTGTTGCAAAACCACCGGTTGCAACACCACCCA-C-CGTAACTCCACCTGTTGCAACT 3999
|||| | || || ||||| |||||||| ||||| | | || || || || || |||||
Sbjct 1191 GCCTATCGCTAAGCCACCTGTTGCAACTCCACCTATCGCG-AA-GCCGCCAGTCGCAACG 1248
Query 4000 CCTCCAATCGCAAAGCCACCCGGCGC-ACGGCCACCCGT-TGC-C-ACACCACCCG-TAG 4054
|| || |||| | || || | || || || ||| | | | | | |||| ||| |||
Sbjct 1249 CCACCTGTCGCCACTCCTCCTGTTGCAAC-TCC-CCC-TAT-CTCAAAACCA-CCGATAG 1303
Query 4055 CAACTCCACCTATCGCTAAGTCGCCTGTTGCAACCCCACCTAT-GACAAAGCCACCTGTT 4113
||| |||||||||||| ||| |||| | |||| || ||| | | |||| |||||| ||
Sbjct 1304 CAAATCCACCTATCGCAAAGCCGCCAGCCGCAAGTCCTCCTGTCG-CAAAACCACCTCTT 1362
Query 4114 GCAAGTTCACCAATTGCAACT-CCTCCAATCGCAAAAACACCCATCGCAACGC-CACCTA 4171
|||| | |||| ||||||| | || || | || | || | ||| | | || |||
Sbjct 1363 GCAACTCCACCTATTGCAA-TGCCACCTGTTGC----A-ACGC--CGC--C-CACATCTA 1411
Query 4172 CAACTATGCCGAAAACTTGCCCAATTGACACGTTGAAGCTAGGCTCGTGTGTTGACCTTC 4231
|||||||||||||||||||||||||||||||||| || || ||||| |||||| |||
Sbjct 1412 TGCCTATGCCGAAAACTTGCCCAATTGACACGTTGAAACTTGGTTCGTGCGTTGACGTTC 1471
Query 4232 TTGGAGGTTTGGTTCACATTGGAATTGGGA-AAAGCGCCAAGGAAAAGTGTTGTCCAGTT 4290
||||||||||||| ||||| |||||||| | |||||||||| ||||||||||||||||||
Sbjct 1472 TTGGAGGTTTGGTGCACATCGGAATTGG-ACAAAGCGCCAAAGAAAAGTGTTGTCCAGTT 1530
Query 4291 GTT-GAAGGTTTAGTTGATCTAGACGCAGCCGTTTGTTTATGTACCACTATTAAAGCTAA 4349
|| ||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1531 -TTAGAAGGCTTAGTTGACCTAGACGCAGCTATTTGTCTATGTACCACTATTAAAGCTAA 1589
Query 4350 ACTTCTCAACATAGA-CGTCATTCTCCCCATAGCTCTTGAAGTTCTCCTTAATTGTGGAA 4408
|||||||||||| || | ||||| |||||||||||||||| ||||||||| ||| ||||
Sbjct 1590 ACTTCTCAACATCGAGC-TCATTTTCCCCATAGCTCTTGAGGTTCTCCTTGGTTGCGGAA 1648
Query 4409 AAAATCCACCACCTGGATTCAAATGTCCC 4437
|||| ||||||||||| || || ||||||
Sbjct 1649 AAAAACCACCACCTGGCTTTAAGTGTCCC 1677
Score = 392 bits (212), Expect = 1e-107
Identities = 1019/1402 (73%), Gaps = 81/1402 (6%)
Strand=Plus/Plus
Query 1247 CAACACCGCCCACTGC-G-A-CTCCACCAGTTGCAACTCCTCCTATTGAAAAACCACCGG 1303
||||||| |||| ||| | | || | ||| |||| ||||| || || | ||| || || |
Sbjct 44 CAACACCACCCATTGCGGTACCT-C-CCA-TTGCTACTCCACCAATCGCAAAGCCGCCTG 100
Query 1304 TTGCAACACCACCCACTAC-AACACCGCCCA-CCGCAACTCCACCTGTTGCAAAACCACC 1361
| ||||| || |||||||| || |||| ||| |||||||||| || |||| || ||
Sbjct 101 TCGCAACTCCTCCCACTACGAA-ACCG-CCAGTTACAACTCCACCAGTAGCAACTCCTCC 158
Query 1362 -AGTTGAAACACCACCAATAGCAACTCCACCTACCGC-AAAGCCACCAATCT-CAACTCC 1418
| ||| || || || || |||| ||||||| | | | | || || | | |||||||
Sbjct 159 TA-TTGCTACTCCTCCTATCGCAAAGCCACCTATCACTACA-CCGCCTGT-TGCAACTCC 215
Query 1419 TCCTATTTCAAAACCACCAGTTGCAACACCACCAGCCGCAACACCACCTA-TAACAACTC 1477
|||||| |||||||||||||||||||||| ||| ||||||||||||| | || ||||||
Sbjct 216 ACCTATTGCAAAACCACCAGTTGCAACACCGCCAACCGCAACACCACC-AGTAGCAACTC 274
Query 1478 CAAC-ACCAG-TAAAACCACCTGTTGCAACTCCACC-GTTAGCAATTCCACCCGTCGCAA 1534
|| | | | | | || ||||| || ||||| ||||| ||| |||| ||||| | ||||
Sbjct 275 CACCTATC-GCT-AAGCCACCCGTAGCAACCCCACCAGTT-GCAACGCCACCTATAGCAA 331
Query 1535 AACCCCCAGTTGTAACACCGCCCACCGCAACACCACCTATTGCAACTCCTCCTATTGCAA 1594
| || |||| ||| ||||||||||||||||||||||||||||||||
Sbjct 332 AGCCACCAGCTGT---------------AACACCACCTATTGCAACTCCTCCTATTGCAA 376
Query 1595 AATCACCGGTTGCAACACCGCCCACCGCGACACCACCAGTTGCAACTCCTCCTATTGCAA 1654
| | || |||||||||| || | || || || || ||| ||| || ||| ||||||
Sbjct 377 CACCGCCTATTGCAACACCACCTATTGCAACTCCGCCTGTTTCAAAGCCACCTGTTGCAA 436
Query 1655 AACCACCAGTTGTAACACCACCAACTACAACACCGCCCACC-GCAACTCCACCTGTTGCA 1713
||||||||||| |||||| ||||| ||| || || | |||||||||||| | ||
Sbjct 437 CACCACCAGTTGCAACACCGCCAACCGCAATGCCACC-AGTAGCAACTCCACCTATCGCT 495
Query 1714 AAACCACCGGTTGCAACACCACCAATAGCAACTCCACCTACCGCAAAGCCACCAATCT-C 1772
|| || || |||| ||| || || | ||||| || |||| ||||||||||| | | |
Sbjct 496 AAGCCGCCTGTTGTAACGCCGCCCGTTGCAACCCCGCCTATTGCAAAGCCACCTGT-TGC 554
Query 1773 AACTCCTCCTATTTCAAAATCA-CCAGTTGCAACA-CCACCAGCCGCAACACCACCTA-T 1829
||| || |||||| ||| || || ||| ||| | ||||| | ||||||||||| | |
Sbjct 555 AACACCACCTATTGCAAC-TCCGCCTGTTTCAA-AGCCACCGGTTGCAACACCACC-AGT 611
Query 1830 CACAACTCCACC-ACCCGCAAAACCTCCTGTTGCAACTCCACCAATAGC-AACTCCACCC 1887
|||| ||||| ||| ||| || || || ||||||||||| || || || || ||
Sbjct 612 TGCAACACCACCCACCA-CAATGCCACCAGTAGCAACTCCACCTATCGCTAAG-CCGCCT 669
Query 1888 ATCGCAAAACCGCCAGTTGCAACACCGCCCACCGCAACA-CCACCAATTGCAACTTCTCC 1946
| |||| ||||| |||||||| ||||| | |||| | ||||| ||||||| | ||
Sbjct 670 GTTGCAACGCCGCCCGTTGCAACCCCGCCTATTGCAA-AGCCACCTGTTGCAACACCACC 728
Query 1947 TGTTGCAAAACCACCAGTTGCAACA-CCACCTATAAAAACTCCACCACCTGCAAAACCGC 2005
| |||||| || || ||| ||| | ||||| | ||| |||||| ||||| |||||
Sbjct 729 TATTGCAACTCCGCCTGTTTCAA-AGCCACCGGTTGCAACACCACCAGTTGCAACACCGC 787
Query 2006 CTGTTGCAATTCCACCAATAGCAACTCCACCCGTCGCAAAACCGCCAGTTGCAACACCGC 2065
| ||| |||||| ||||||||||||| |||| || ||||| |||||||| ||||
Sbjct 788 CCACCATAATGCCACCAGTAGCAACTCCACCTATCGCTAAGCCGCCTGTTGCAACGCCGC 847
Query 2066 CCACC-GCAACTCCACCTATTGCAACTCCTCCTATTGCAACACCACCGGTTGTAACACCG 2124
| | ||||| ||||||||||||| || || || ||||| |||||||||| ||| ||
Sbjct 848 C-AGTTGCAACCCCACCTATTGCAAAGCCACCCATAGCAACCCCACCGGTTGCAACTCCT 906
Query 2125 CCCACCGCAACTCCACC-AGTTGCAACTCCTCCTATTGCAAAACCTCCAACG-A-CAATA 2181
|| | ||||| ||||| | | ||||| || ||||||||||| || || || | |||
Sbjct 907 CCTATCGCAAAGCCACCCA-TCGCAACACCACCTATTGCAAAGCCACC--CGTAGCAACC 963
Query 2182 CCGCCTACT-GCAACTCCACCTGTTGCAATGCCACCAATAGCAACTCCACCTACCGCAAA 2240
|| || | | |||||||| ||| | |||| |||||| || ||||| ||||||| |||||
Sbjct 964 CCACC-AGTTGCAACTCCTCCTATCGCAAAGCCACCCATCGCAACACCACCTATTGCAAA 1022
Query 2241 ACCGCCTATTGCAACTCCACCGA-TAGCAATTCCACCCGTCGCAAAACCCCCAGTTGTAA 2299
|| |||| |||||||| || | | |||| ||||| || || | ||| ||| | ||
Sbjct 1023 GCCACCTACCGCAACTCCTCCTACTT-CAATCCCACCTGTAGCGACACCGCCAATCACAA 1081
Query 2300 CACCGCCCACC-GCAACACCACCTATTGCAACTCCTCCTA-TTGCAAAATCACCGGTTGC 2357
| || || | |||||||| || | ||||||||||| | |||||||| |||| || ||
Sbjct 1082 CTCCTCC-AGTTGCAACACCGCCAACCGCAACTCCTCC-AGTTGCAAAACCACCCGTCGC 1139
Query 2358 AACACCGCCCACCGCGACACCACCAGTTGCAACTCCTCCTATTGCAAAACCACC-AGTTG 2416
|||||||| || | || || || |||| || || || |||| ||| || | | |
Sbjct 1140 TACACCGCCTGTTGCTTCTCCGCCTGTCGCAAAACCACCAATGGCAACACCGCCTA-TCG 1198
Query 2417 C-AACACCACCCACTACAGCACCGCCCACCGC-AACTCCACCTGTTGCAAAACCACCGGT 2474
| || ||||| | || | || || | ||| || || || || |||| ||||| ||
Sbjct 1199 CTAAG-CCACCTGTTGCAACTCCACCTATCGCGAAG-CCGCCAGTCGCAACGCCACCTGT 1256
Query 2475 TGCAACACCACCAATAGCAACTCCACCTACCGCAAAGCCACCAATCTTAACTCCTCCTAT 2534
|| || || || | |||||||| |||| | |||| ||||| || || ||| |||||
Sbjct 1257 CGCCACTCCTCCTGTTGCAACTCCCCCTATCTCAAAACCACCGATAGCAAATCCACCTAT 1316
Query 2535 TTCAAAACCACCAGTTGCAACACCACCAGCCGCAACACCACCTATCACAACTCCACC-AC 2593
|||| || |||| |||| || || | ||||| ||||||| | |||||||||| |
Sbjct 1317 CGCAAAGCCGCCAGCCGCAAGTCCTCCTGTCGCAAAACCACCTCTTGCAACTCCACCTAT 1376
Query 2594 CCGCAAAACCTCCTGTTGCAAC 2615
|||| || |||||||||||
Sbjct 1377 T-GCAATGCCACCTGTTGCAAC 1397
Score = 388 bits (210), Expect = 1e-106
Identities = 1000/1374 (73%), Gaps = 84/1374 (6%)
Strand=Plus/Plus
Query 1795 CCAGTTGCAACACCACCAGCCGCAACA-CCACCTATCACAACTCC-ACCACCCGCAAAAC 1852
||| |||| || |||||| ||||| | || ||| || ||||||| ||| | | ||||
Sbjct 68 CCA-TTGCTACTCCACCAATCGCAA-AGCCGCCTGTCGCAACTCCTCCCA-CTACGAAAC 124
Query 1853 CTCCTGTTGCAACTCCACCAATAGCAACTCCACCCATCGCAAAACCGCC-AGTTGCAACA 1911
| || ||| ||||||||||| |||||||||| || || || | || || | | |||| |
Sbjct 125 CGCCAGTTACAACTCCACCAGTAGCAACTCCTCCTATTGCTACTCCTCCTA-TCGCAA-A 182
Query 1912 -CCGCCCACCGCAACACCACCAATTGCAACTTCTCCTGTTGCAAAACCACCAGTTGCAAC 1970
|| || | | | ||||| || |||||||| | ||| ||||||||||||||||||||||
Sbjct 183 GCCACCTATCACTACACCGCCTGTTGCAACTCCACCTATTGCAAAACCACCAGTTGCAAC 242
Query 1971 ACCACCTATAAAAACTCCACCACCT-GCAAAACCGCCTGTTGC-AATTCCACCAATAGCA 2028
||| || | ||| |||||| | |||| || ||| | || || ||||| |||||
Sbjct 243 ACCGCCAACCGCAACACCACCA-GTAGCAACTCCACCTATCGCTAA-GCCACCCGTAGCA 300
Query 2029 ACTCCACCCGTCGCAAAACCGCC-AGTTGCAACA-CCGCCCA-CCGCAACTCCACCTATT 2085
|| ||||| || |||| || || | | |||| | || ||| | | ||| |||||||||
Sbjct 301 ACCCCACCAGTTGCAACGCCACCTA-TAGCAA-AGCC-ACCAGCTGTAACACCACCTATT 357
Query 2086 GCAACTCCTCCTATTGCAACACCACCGGTTGTAACACCGCCCACCGCAACTCCACCAGTT 2145
||||||||||||||||||||||| || ||| |||||| || | |||||||| || |||
Sbjct 358 GCAACTCCTCCTATTGCAACACCGCCTATTGCAACACCACCTATTGCAACTCCGCCTGTT 417
Query 2146 GCAACTCCTCCTATTGCAAAACCTCCAAC-GACAATACCGCCTACTGCAACT-CCACCTG 2203
||| || ||| |||||| ||| ||| | ||| |||||| || |||| | ||||| |
Sbjct 418 TCAAAGCCACCTGTTGCAACACCACCAGTTG-CAACACCGCCAACCGCAA-TGCCACCAG 475
Query 2204 TTGCAA-TGCCACCAATAGC-AACTCCACCTACCGCAAAACCGCCTATTGCAACTCCACC 2261
| |||| | ||||| || || || || ||| | || ||||| ||||||| || ||
Sbjct 476 TAGCAACT-CCACCTATCGCTAAG-CCGCCTGTTGTAACGCCGCCCGTTGCAACCCCGCC 533
Query 2262 GATAGCAATTCCACCCGTCGCAAAACCCCC-AGTTGTAACACCGCC-----CA---CC-- 2310
|| |||| ||||| || |||| ||| || | ||| ||| ||||| || ||
Sbjct 534 TATTGCAAAGCCACCTGTTGCAACACCACCTA-TTGCAACTCCGCCTGTTTCAAAGCCAC 592
Query 2311 -G----CAACACCACCTA-TTGCAACTCCTCCTATTGCAAAAT-C-ACCGGTTGCAACAC 2362
| |||||||||| | ||||||| || || | || ||| | ||| || ||||| |
Sbjct 593 CGGTTGCAACACCACC-AGTTGCAACACCACCCAC--CACAATGCCACCAGTAGCAACTC 649
Query 2363 CGCCCACCGCGACA-CCACCAGTTGCAACTCCTCCTATTGCAAAACCACC-AGTTGCAAC 2420
| || | ||| | | || || |||||||| || || |||||| || || | ||||||
Sbjct 650 CACCTATCGCTA-AGCCGCCTGTTGCAACGCCGCCCGTTGCAACCCCGCCTA-TTGCAA- 706
Query 2421 A-CCACCCACTACAGCACCGCCCACCGCAACTCCACCTGTTGCAAAACCACCGGTTGCAA 2479
| ||||| | || |||| || | |||||||| |||||| |||| |||||||||||||
Sbjct 707 AGCCACCTGTTGCAACACCACCTATTGCAACTCCGCCTGTTTCAAAGCCACCGGTTGCAA 766
Query 2480 CACCACCAATAGCAACTCCACCTACCGCAAAGCCACCAATCTTAACTCCTCCTATTTCAA 2539
|||||||| | ||||| || || ||| || ||||||| | |||||| ||||| | |
Sbjct 767 CACCACCAGTTGCAACACCGCCCACCATAATGCCACCAGTAGCAACTCCACCTATCGCTA 826
Query 2540 AACCACCAGTTGCAACACCACCAGCCGCAACACCACCTATCACAACTCCACC-ACCCGCA 2598
| || || |||||||| || |||| ||||| |||||||| ||| ||||| | |||
Sbjct 827 AGCCGCCTGTTGCAACGCCGCCAGTTGCAACCCCACCTATTGCAAAGCCACCCATA-GCA 885
Query 2599 AAACCTCCTGTTGCAACTCCACCAATAGCAACTCCACCCATCGCAAAACCGCC-AGTTGC 2657
| || || ||||||||||| || || |||| ||||||||||||| ||| || | ||||
Sbjct 886 ACCCCACCGGTTGCAACTCCTCCTATCGCAAAGCCACCCATCGCAACACCACCTA-TTGC 944
Query 2658 AACA-CCGCCCACCGCAACACCACCAATTGCAACTTCTCCTGTTGCAAAACCACC-AGTT 2715
|| | || ||| ||||| |||||| |||||||| ||||| | ||||| ||||| | |
Sbjct 945 AA-AGCCACCCGTAGCAACCCCACCAGTTGCAACTCCTCCTATCGCAAAGCCACCCA-TC 1002
Query 2716 GCAATACCACCTATAA-AAACTCCACC-ACCCGCAAAACCGCCTG-TTGCAATTCCACCA 2772
|||| ||||||||| ||| ||||| ||| |||| || ||| || |||| |||||
Sbjct 1003 GCAACACCACCTATTGCAAAG-CCACCTACC-GCAACTCCTCCTACTT-CAATCCCACCT 1059
Query 2773 ATAGCAACTCCACCCGTCGCAAAACCGCCAGTTGCAACACCGCCCACCGCAACTCCACCT 2832
|||| || || || || ||| || ||||||||||||||||| ||||||||||| ||
Sbjct 1060 GTAGCGACACCGCCAATCACAACTCCTCCAGTTGCAACACCGCCAACCGCAACTCCTCC- 1118
Query 2833 A-TTGCAACTTCTCCTATTGCAACACCACCGGTTG-TAACACCGCCCACCGCAACTTCAC 2890
| |||||| | || | || ||||| || |||| | | ||||| ||||| |||
Sbjct 1119 AGTTGCAAAACCACCCGTCGCTACACCGCCTGTTGCTT-CTCCGCCTGTCGCAAAACCAC 1177
Query 2891 CAGTTGCAACTCCTCCTATTGCAAAACCTCCAAC-GACAACACCGCCCACCGC-AACTCC 2948
|| | ||||| || ||||| || || || || | |||| || || | ||| || ||
Sbjct 1178 CAATGGCAACACCGCCTATCGCTAAGCCACCTGTTG-CAACTCCACCTATCGCGAAG-CC 1235
Query 2949 ACCTGTTGCAATGCCACCAATAGCAACTCCACCTACCGCAAAACCGCCTGT-TGCAACTC 3007
|| || |||| |||||| | || ||||| ||| |||| || ||| | | ||| |
Sbjct 1236 GCCAGTCGCAACGCCACCTGTCGCCACTCCTCCTGTTGCAACTCCCCCTATCT-CAAAAC 1294
Query 3008 CACCTATAGCAAATCCACCTGTAGAAAAACCGCCGGTTGCAACACCGCCAATCGCAAAAC 3067
|||| ||||||||||||||| | | ||| ||||| | |||| || || |||||||||
Sbjct 1295 CACCGATAGCAAATCCACCTATCGCAAAGCCGCCAGCCGCAAGTCCTCCTGTCGCAAAAC 1354
Query 3068 CGCCCACT-GTA-CTGCCACCTATTGCAAAACCACCAGTTGAAACATCGCCCAC 3119
| || || | | || ||||||||||||| ||||| |||| ||| |||||||
Sbjct 1355 CACCT-CTTGCAACT-CCACCTATTGCAATGCCACCTGTTGCAACGCCGCCCAC 1406
Score = 374 bits (202), Expect = 4e-102
Identities = 666/888 (75%), Gaps = 40/888 (5%)
Strand=Plus/Plus
Query 3304 GCAACTCCACCTGTTTCTACTCCTCCTATCGCAAAGCCACCTATCGCAACACCGCCTGTT 3363
|||||||| ||| || ||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 148 GCAACTCCTCCTATTGCTACTCCTCCTATCGCAAAGCCACCTATCACTACACCGCCTGTT 207
Query 3364 GCAACTACGCCCATTGCAAAACCACCAATTGCAACACCACCCACCGCAA-ATCCACCTGT 3422
|||||| | || ||||||||||||||| |||||||||| || ||||||| | ||||| ||
Sbjct 208 GCAACTCCACCTATTGCAAAACCACCAGTTGCAACACCGCCAACCGCAACA-CCACCAGT 266
Query 3423 TGCAAATCCTCCTATCGCAAAGTCACCTATTGCAAAGCCACCAATTGCAACACCCCCCAC 3482
|||| ||| |||||||| ||| |||| | |||| |||||| ||||||| || || |
Sbjct 267 AGCAACTCCACCTATCGCTAAGCCACCCGTAGCAACCCCACCAGTTGCAACGCCACCTAT 326
Query 3483 CGCAATGCCATCAA-TAGCAACTCCACCTATCGGTAAG-CCGCCTGTTGCAACCCCGCCC 3540
|||| |||| || | | ||| |||||||| | || || ||| ||||||| |||||
Sbjct 327 AGCAAAGCCACCAGCT-GTAACACCACCTATTGC-AACTCCTCCTATTGCAACACCGCCT 384
Query 3541 ATGGCAA-AGCCACC-AGTTGCAAGTCCACCAATTGCAACA-CCTCCAATCATAAAACCA 3597
|| |||| | ||||| | |||||| ||| || || ||| | || || | || ||||
Sbjct 385 ATTGCAACA-CCACCTA-TTGCAACTCCGCCTGTTTCAA-AGCCACCTGTTGCAACACCA 441
Query 3598 CCAGTCGCAACTCCTCCAATCACAAAACCGCCGGTTGCAACTCCACC-AGTAGC-AACTC 3655
||||| ||||| || |||| | ||| || || || ||||||||||| | | || || |
Sbjct 442 CCAGTTGCAACACCGCCAACCGCAATGCCACCAGTAGCAACTCCACCTA-TCGCTAAG-C 499
Query 3656 CTCCTATCGCAAAGCCACCAGTCGCAACGTCGCCTATTG-AAACTCCGCCCGTGGCAAAA 3714
| ||| | | || ||| || || ||||| ||||||||| ||| || || || |||| |
Sbjct 500 CGCCTGTTGTAACGCCGCCCGTTGCAACCCCGCCTATTGCAAAG-CCACCTGTTGCAACA 558
Query 3715 CCACC-AGTTACAACTCCACCTGTAGCAACTCCTCCCATCGTAAAACCACCTA-TTGTGA 3772
||||| | || ||||||| ||||| ||| || || | | || |||||| | ||| |
Sbjct 559 CCACCTA-TTGCAACTCCGCCTGTTTCAAAGCCACCGGTTGCAACACCACC-AGTTGCAA 616
Query 3773 CACCGCCTATTGCAACT-CCACCCA-TCGCAAAGTC-ACCAATCGCGCCGCCGCCTATTG 3829
|||| || | ||| | ||||| | | |||| || ||| ||||| ||||||| |||
Sbjct 617 CACCACCCACCACAA-TGCCACC-AGTAGCAAC-TCCACCTATCGCTAAGCCGCCTGTTG 673
Query 3830 GTACTCCTCCTATTGCAAAACCACC-AGTTGCGACA-CCACCAACCGCAACTCCACCTGT 3887
|| || || |||||| || || | |||| | | ||||| ||||| |||||| |
Sbjct 674 CAACGCCGCCCGTTGCAACCCCGCCTA-TTGCAA-AGCCACCTGTTGCAACACCACCTAT 731
Query 3888 TGCTACTTCTCCTATAGCAAAACCACCTGTTGCAACGCCGCCACCTGCAACTCCGCCTGT 3947
||| ||| | ||| | |||| ||||| |||||||| || ||| |||||| |||||
Sbjct 732 TGCAACTCCGCCTGTTTCAAAGCCACCGGTTGCAACACCACCAGTTGCAACACCGCCCAC 791
Query 3948 TGCAAAA--CCACCGGTTGCAACACCACCCACCG-TAACTCCACCTGTTGCAACTCCTCC 4004
|| || ||||| || ||||| ||||| | || ||| || ||||||||||| || ||
Sbjct 792 --CATAATGCCACCAGTAGCAACTCCACCTATCGCTAAG-CCGCCTGTTGCAACGCCGCC 848
Query 4005 AATCGCAAAGCCACCCGGCGCACGGCCACCCGTTGCCACACCACCCGTAGCAACTCCACC 4064
| | |||| ||||| ||| ||||||| | || || ||||| || |||||||| ||
Sbjct 849 AGTTGCAACCCCACCTATTGCAAAGCCACCCATAGCAACCCCACCGGTTGCAACTCCTCC 908
Query 4065 TATCGCTAAGTCGCCTGTTGCAACCCCACCTAT-GACAAAGCCACCTGTTGCAAGTTCAC 4123
|||||| ||| | || | ||||| |||||||| | |||||||||| || |||| |||
Sbjct 909 TATCGCAAAGCCACCCATCGCAACACCACCTATTG-CAAAGCCACCCGTAGCAACCCCAC 967
Query 4124 CAATTGCAACTCCTCCAATCGCAAAAACACCCATCGCAACGCCACCTA 4171
|| ||||||||||||| |||||||| ||||||||||||| |||||||
Sbjct 968 CAGTTGCAACTCCTCCTATCGCAAAGCCACCCATCGCAACACCACCTA 1015
Score = 361 bits (195), Expect = 3e-98
Identities = 807/1095 (74%), Gaps = 72/1095 (7%)
Strand=Plus/Plus
Query 2050 CCAGTTGCAACACCGCCCACCGCAACTCCACCTATTGCAACTCCTCCTATTGC-AACACC 2108
||| |||| || || || | ||||| || ||| | ||||||||||| | | | || |||
Sbjct 68 CCA-TTGCTACTCCACCAATCGCAAAGCCGCCTGTCGCAACTCCTCCCACTACGAA-ACC 125
Query 2109 ACCGGTTGTAACACCGCCCA-CCGCAACTCCACC-AGTTGCAACTCCTCCTATTGCAAAA 2166
|| ||| ||| || ||| |||||||| || | |||| ||||||||||| |||||
Sbjct 126 GCCAGTTACAACTCC-ACCAGTAGCAACTCCTCCTA-TTGCTACTCCTCCTATCGCAAAG 183
Query 2167 CCTCC-AACGACAATACCGCCTACTGCAACTCCACCTGTTGCAATGCCACCAATAGCAAC 2225
|| || | | || | ||||||| ||||||||||||| |||||| |||||| | |||||
Sbjct 184 CCACCTATC-ACTACACCGCCTGTTGCAACTCCACCTATTGCAAAACCACCAGTTGCAAC 242
Query 2226 TCCACCTACCGCAAAACCGCCTA-TTGCAACTCCACCGATAGC-AATTCCACCCGTCGCA 2283
|| || ||||||| ||| || | | ||||||||||| || || || |||||||| ||
Sbjct 243 ACCGCCAACCGCAACACCACC-AGTAGCAACTCCACCTATCGCTAA-GCCACCCGTAGC- 299
Query 2284 AAACCC-CCAGTTGTAA---CACC----GC----CCACC-GC---AACACCACCTATTGC 2327
|| ||| ||||||| || |||| || ||||| || |||||||||||||||
Sbjct 300 AACCCCACCAGTTGCAACGCCACCTATAGCAAAGCCACCAGCTGTAACACCACCTATTGC 359
Query 2328 AACTCCTCCTATTGCAAAATCACCGGTTGCAACACCGCCCACCGCGACACCACCAGTTGC 2387
||||||||||||||||| | | || |||||||||| || | || || || || ||| |
Sbjct 360 AACTCCTCCTATTGCAACACCGCCTATTGCAACACCACCTATTGCAACTCCGCCTGTTTC 419
Query 2388 AACTCCTCCTATTGCAAAACCACCAGTTGCAACACCACCCACTACAGCACCGCCCACC-G 2446
|| || ||| |||||| |||||||||||||||||| || || | ||| ||| ||| |
Sbjct 420 AAAGCCACCTGTTGCAACACCACCAGTTGCAACACCGCCAAC--C-GCAATGCC-ACCAG 475
Query 2447 ---CAACTCCACCTGTTGCAAAACCACCGGTTGCAACACCACCAATAGCAACTCCACCTA 2503
||||||||||| | || || || || |||| ||| || || | ||||| || ||||
Sbjct 476 TAGCAACTCCACCTATCGCTAAGCCGCCTGTTGTAACGCCGCCCGTTGCAACCCCGCCTA 535
Query 2504 CCGCAAAGCCACCAATCTT--AACTCCTCCTATTTCAAAACCACCAGTTGCAACA-CCAC 2560
||||||||||| | || ||| || |||||| ||| || || ||| ||| | ||||
Sbjct 536 TTGCAAAGCCACC--TGTTGCAACACCACCTATTGCAACTCCGCCTGTTTCAA-AGCCAC 592
Query 2561 CAGCCGCAACACCACCTA-TCACAACTCCACC-ACCCGCAAAACCTCCTGTTGCAACTCC 2618
| | ||||||||||| | | |||| ||||| ||| ||| || || || ||||||||
Sbjct 593 CGGTTGCAACACCACC-AGTTGCAACACCACCCACCA-CAATGCCACCAGTAGCAACTCC 650
Query 2619 ACCAATAGC-AACTCCACCCATCGCAAAACCGCCAGTTGCAACACCGCCCACCGCAACA- 2676
||| || || || || || | |||| ||||| |||||||| ||||| | |||| |
Sbjct 651 ACCTATCGCTAAG-CCGCCTGTTGCAACGCCGCCCGTTGCAACCCCGCCTATTGCAA-AG 708
Query 2677 CCACCAATTGCAACTTCTCCTGTTGCAAAACCACCAGTTGCAATA-CCACCTATAAAAAC 2735
||||| ||||||| | ||| |||||| || || ||| ||| | ||||| | |||
Sbjct 709 CCACCTGTTGCAACACCACCTATTGCAACTCCGCCTGTTTCAA-AGCCACCGGTTGCAAC 767
Query 2736 TCCACCACCCGCAAAACCGCCTGTTGCAATTCCACCAATAGCAACTCCACCCGTCGCAAA 2795
|||||| |||| |||||| ||| |||||| ||||||||||||| |||| ||
Sbjct 768 ACCACCAGTTGCAACACCGCCCACCATAATGCCACCAGTAGCAACTCCACCTATCGCTAA 827
Query 2796 ACCGCCAGTTGCAACACCGCCCACC-GCAACTCCACCTATTGCAACTTCTCCTATTGCAA 2854
||||| |||||||| ||||| | ||||| ||||||||||||| | || || ||||
Sbjct 828 GCCGCCTGTTGCAACGCCGCC-AGTTGCAACCCCACCTATTGCAAAGCCACCCATAGCAA 886
Query 2855 CACCACCGGTTGTAACACCGCCCACCGCAACTTCACC-AGTTGCAACTCCTCCTATTGCA 2913
| |||||||||| ||| || || | ||||| |||| | | ||||| || |||||||||
Sbjct 887 CCCCACCGGTTGCAACTCCTCCTATCGCAAAGCCACCCA-TCGCAACACCACCTATTGCA 945
Query 2914 AAACCTCCAACG-A-CAACACCGCCCACC-GCAACTCCACCTGTTGCAATGCCACCAATA 2970
|| || || || | |||| || || | |||||||| ||| | |||| |||||| ||
Sbjct 946 AAGCCACC--CGTAGCAACCCCACC-AGTTGCAACTCCTCCTATCGCAAAGCCACCCATC 1002
Query 2971 GCAACTCCACCTACCGCAAAACCGCCTGTTGCAACTCCACCTA-TAGCAAATCC-ACCTG 3028
||||| ||||||| ||||| || ||| |||||||| |||| | ||| ||| |||||
Sbjct 1003 GCAACACCACCTATTGCAAAGCCACCTACCGCAACTCCTCCTACTT-CAA-TCCCACCTG 1060
Query 3029 TAGAAAAACCGCCGGTTGCAACACCGCCAATCGCAAAACCGCCCACTGTA-CTGCCACCT 3087
||| | |||||| | |||| || ||| | |||| |||||| || | | || || ||
Sbjct 1061 TAGCGACACCGCCAATCACAACTCCTCCAGTTGCAACACCGCCAACCGCAACT-CCTCC- 1118
Query 3088 A-TTGCAAAACCACC 3101
| |||||||||||||
Sbjct 1119 AGTTGCAAAACCACC 1133
Score = 361 bits (195), Expect = 3e-98
Identities = 398/494 (81%), Gaps = 21/494 (4%)
Strand=Plus/Plus
Query 3963 TGCAACACCACCCACCGTAACTCCACCTGTTGCAACTCCTCCAATCGCAAAGCCACC-CG 4021
||||||||| ||| || ||| || ||||| |||| ||||| | |||| |||||
Sbjct 1680 TGCAACACCTCCCGTCGCAACACCTCCTGTCGCAAAGCCTCCTGTGGCAACTCCACCTAT 1739
Query 4022 GCGCACGGCCACCCGTTGCCACACCACCCGTAGCAACTCCACCTA-TCGCTAA-GTCGCC 4079
| ||| ||| || || || ||||| ||||| |||| || || | |||| || | ||||
Sbjct 1740 G-GCAAAGCCGCCAGTCGCAACACCTCCCGTTGCAAAGCCGCC-AGTCGC-AATGCCGCC 1796
Query 4080 TGTTGCAACCCCA-CC-TATGACAAAGCCACCTGTTGCAAGTTCACCAATTGCAACTCCT 4137
| ||||| ||| || | || |||| || || || |||| | || || |||| ||
Sbjct 1797 AATCGCAACACCACCCGT-TG-CAAAACCTCCAGTCGCAACACCTCCCATCGCAAAGCCA 1854
Query 4138 CCAATCGCAAAAACACCCATCGCAACGCCACCTACAACTATG-C----CGAAA-ACTTGC 4191
|| |||||| | ||||| || || || || ||| ||||| | | ||| |||||
Sbjct 1855 CCTGTCGCAACTCCTCCCATTGCCACACCGCCAACATCTATGCCTAAACCAAAGACTTGT 1914
Query 4192 CCAATTGACACGTTGAAGCTAGGCT-CGTGTGTTGACCTTCTTGGAGGTTTGGTTCACAT 4250
|||||| | |||||||||||||| | |||| |||||| ||||||||||||||||||||||
Sbjct 1915 CCAATTAATACGTTGAAGCTAGG-TGCGTGCGTTGACGTTCTTGGAGGTTTGGTTCACAT 1973
Query 4251 TGGAATTGGGAAAAGCGCCAAGGAAAAGTGTTGTCCAGTTGTT-GAAGGTTTAGTTGATC 4309
|||||| ||| ||||| |||| |||||||||||||||||| || ||||||||||||||||
Sbjct 1974 TGGAATCGGGCAAAGCACCAAAGAAAAGTGTTGTCCAGTT-TTGGAAGGTTTAGTTGATC 2032
Query 4310 TAGACGCAGCCGTTTGTTTATGTACCACTATTAAAGCTAAACTTCTCAACATAGACGTCA 4369
||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||
Sbjct 2033 TAGACGCAGCCGTTTGTTTATGTACCACTATTAAAGCCAAACTTCTCAACATCGACCTCA 2092
Query 4370 TTCTCCCCATAGCTCTTGAAGTTCTCCTTAATTGTGGAAAAAATCCACCACCTGGATTCA 4429
|||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||
Sbjct 2093 TTCTCCCCATAGCTCTTGAAGTTCTCCTTA-TTGTGGTAAAAATCCACCGCCTGGCTTCA 2151
Query 4430 AATGTCCCGCCTGA 4443
| |||||||| |||
Sbjct 2152 AGTGTCCCGCGTGA 2165
Score = 326 bits (176), Expect = 1e-87
Identities = 997/1381 (72%), Gaps = 106/1381 (8%)
Strand=Plus/Plus
Query 2241 ACCGCCTATTGCAACTCCACCGATAGCAATTCCACCCGTCGCAAAACC-CCCAGT-TGTA 2298
||| || ||||| |||||||| || |||| || || ||||||| || |||| | | |
Sbjct 63 ACCTCCCATTGCTACTCCACCAATCGCAAAGCCGCCTGTCGCAACTCCTCCCACTACG-A 121
Query 2299 ACACCGCCCA-CCGCAACACCACCTA-TTGCAACTCCTCCTATTGCAAAAT-CACCGGTT 2355
| |||| ||| |||| ||||| | | ||||||||||||||||| | | | || |
Sbjct 122 A-ACCG-CCAGTTACAACTCCACC-AGTAGCAACTCCTCCTATTGC-TACTCCTCCTATC 177
Query 2356 GCAACA-CCGCCCACCGCGACACCACCAGTTGCAACTCCTCCTATTGCAAAACCACCAGT 2414
|||| | || || | | | ||||| || ||||||||||| ||||||||||||||||||||
Sbjct 178 GCAA-AGCCACCTATCACTACACCGCCTGTTGCAACTCCACCTATTGCAAAACCACCAGT 236
Query 2415 TGCAACACCACCCACTACAGCACCGCCCACC-GCAACTCCACCTGTTGCAAAACCACCGG 2473
||||||||| || || || |||| || | |||||||||||| | || || ||||| |
Sbjct 237 TGCAACACCGCCAACCGCAACACCACC-AGTAGCAACTCCACCTATCGCTAAGCCACCCG 295
Query 2474 TTGCAACACCACCAATAGCAACTCCACCTACCGCAAAGCCACCAATCT-TAACTCCTCCT 2532
| ||||| |||||| | ||||| ||||||| |||||||||||| || |||| || |||
Sbjct 296 TAGCAACCCCACCAGTTGCAACGCCACCTATAGCAAAGCCACCAG-CTGTAACACCACCT 354
Query 2533 ATTTCAAAACCACC-AGTTGCAACACCACC-AGCCGCAACACCACCTATCACAACTCCAC 2590
||| ||| || || | |||||||||| || | |||||||||||||| ||||||| |
Sbjct 355 ATTGCAACTCCTCCTA-TTGCAACACCGCCTATT-GCAACACCACCTATTGCAACTCCGC 412
Query 2591 CACCCGCAAAACCTCCTGTTGCAACTCCACCAATAGCAACTCCACCCATCGCAAAACCGC 2650
| |||| || ||||||||||| |||||| | ||||| || || | ||||| || |
Sbjct 413 CTGTTTCAAAGCCACCTGTTGCAACACCACCAGTTGCAACACCGCCAACCGCAATGCCAC 472
Query 2651 CAGTTGCAACACCGCC---C---A--CCGC-------AACACCACCAATTGCAACTTCTC 2695
|||| ||||| || || | | |||| ||| || || ||||||| | |
Sbjct 473 CAGTAGCAACTCCACCTATCGCTAAGCCGCCTGTTGTAACGCCGCCCGTTGCAACCCCGC 532
Query 2696 CTGTTGCAAAACCACCAGTTGCAATACCACCTATAAAAACTCCACCACCCGCAAAACCGC 2755
|| ||||||| ||||| ||||||| ||||||||| |||||| || |||| || |
Sbjct 533 CTATTGCAAAGCCACCTGTTGCAACACCACCTATTGCAACTCCGCCTGTTTCAAAGCCAC 592
Query 2756 CTGTTGCAATTCCACCAATAGCAACTCCACCCGTCGCAAAACCGCCAGTTGCAAC---AC 2812
| ||||||| |||||| | ||||| |||||| | ||| || ||||| ||||| ||
Sbjct 593 CGGTTGCAACACCACCAGTTGCAACACCACCCACCACAATGCCACCAGTAGCAACTCCAC 652
Query 2813 C----GC----CCACC-G---CAACTCCACCTATTGCAACTTCTCCTATTGCAACA-CCA 2859
| || || || | |||| || || ||||||| | |||||||||| | |||
Sbjct 653 CTATCGCTAAGCCGCCTGTTGCAACGCCGCCCGTTGCAACCCCGCCTATTGCAA-AGCCA 711
Query 2860 CCGGTTGTAACACCGCCCACCGCAACTTCACCAGTTGCAACTCCTCCTATTGCAAAACCT 2919
|| |||| |||||| || | |||||| | || ||| ||| || || |||||| |||
Sbjct 712 CCTGTTGCAACACCACCTATTGCAACTCCGCCTGTTTCAAAGCCACCGGTTGCAACACCA 771
Query 2920 CCAAC-GACAACACCGCCCACCGCAACT-CCACCTGTTGCAA-TGCCACCAATAGC-AAC 2975
||| | |||||||||||||| || | ||||| || |||| | ||||| || || ||
Sbjct 772 CCAGTTG-CAACACCGCCCACCATAA-TGCCACCAGTAGCAACT-CCACCTATCGCTAAG 828
Query 2976 TCCACCTACCGCAAAACCGCCTGTTGCAACTCCACCTATAGCAAATCCACCTGTAGAAAA 3035
|| ||| |||| ||||| |||||||| |||||||| ||||| ||||| ||| ||
Sbjct 829 -CCGCCTGTTGCAACGCCGCCAGTTGCAACCCCACCTATTGCAAAGCCACCCATAGCAAC 887
Query 3036 ACCGCCGGTTGCAACACCGCCAATCGCAAAACCGCCCA-CTGTA-CTGCCACCTATTGCA 3093
|| ||||||||||| || || |||||||| || |||| | | | | ||||||||||||
Sbjct 888 CCCACCGGTTGCAACTCCTCCTATCGCAAAGCCACCCATC-GCAACA-CCACCTATTGCA 945
Query 3094 AAACCACCAGTTGAAACATCGCCCACC-GCAACACCTCCAACCGCAACTCCACCTGTTGC 3152
|| ||||| || | ||| | || | ||||| ||||| | ||||| ||||| | ||
Sbjct 946 AAGCCACCCGTAGCAACCCCACC-AGTTGCAACTCCTCCTATCGCAAAGCCACCCATCGC 1004
Query 3153 AATTCCTCCTGTTGTAAAACCACCGGTTGCTA-TACCTCCCA-TTACAAAACCACCGGTT 3210
|| || ||| ||| ||| ||||| || | | ||||| | || ||| ||||| ||
Sbjct 1005 AACACCACCTATTGCAAAGCCACCTACCGCAACT-CCTCCTACTT-CAATCCCACCTGTA 1062
Query 3211 GCAACACCACCAGTAACAAATCCACCTACCGCAATGCCACCAATCGTTACGCCGCCTCCT 3270
|| ||||| ||| | |||| ||| || | | ||| | | | || | ||| |
Sbjct 1063 GCGACACCGCCAATCACAACTCCTCC-A--GT--TGC-A--A--C---AC-C-GCCAAC- 1106
Query 3271 ATCGTAACTCCTCCTA-TTGCAAAATCACC-GATCGCAACTCCACCTGTTTCTACTCCTC 3328
|| ||||||||| | |||||||| |||| | |||| || || |||||| || |||| |
Sbjct 1107 --CGCAACTCCTCC-AGTTGCAAAACCACCCG-TCGCTACACCGCCTGTTGCTTCTCCGC 1162
Query 3329 CTATCGCAAAGCCACCTATCGCAACACCGCCTGTTGC-AA-CTACGCCCATTGCAAAACC 3386
|| ||||||| ||||| || |||||||||||| | || || | || | |||||| ||
Sbjct 1163 CTGTCGCAAAACCACCAATGGCAACACCGCCTATCGCTAAGCCAC-CTG-TTGCAACTCC 1220
Query 3387 ACCAATTGC-AACACCACCCAC-CGCAAATCCACCTGTTGCAAATCCTCCTATCGCAAAG 3444
||| || || || || || | ||||| |||||||| || | ||||||| | ||||
Sbjct 1221 ACCTATCGCGAAG-CCGCC-AGTCGCAACGCCACCTGTCGCCACTCCTCCTGTTGCAAC- 1277
Query 3445 TCACC-TAT-TGCAAAGCCACCAATTGCAACACCCCCC-ACCGCAATGCCATCAATAGCA 3501
|| || ||| | |||| ||||| || |||| | || || | ||||| ||| || |||
Sbjct 1278 TCCCCCTATCT-CAAAACCACCGATAGCAA-ATCCACCTATCGCAAAGCCGCCAGCCGCA 1335
Query 3502 ACTCCACCTATCGGTAAGCCGCCTGTTGCAACCCCGCCCATGGCAAAGCCACCAGTTGCA 3561
| ||| ||| ||| || || ||| ||||||| || || || |||| |||||| ||||||
Sbjct 1336 AGTCCTCCTGTCGCAAAACCACCTCTTGCAACTCCACCTATTGCAATGCCACCTGTTGCA 1395
Query 3562 A 3562
|
Sbjct 1396 A 1396
Score = 209 bits (113), Expect = 1e-52
Identities = 451/611 (74%), Gaps = 35/611 (6%)
Strand=Plus/Plus
Query 3571 ATTGCAACACCTCCAATCATAAAACCACCAGTCGCAACTCCT-CCAATCACAAAACCGCC 3629
||||| || || |||||| ||| || || |||||||||||| ||| | || ||||||||
Sbjct 70 ATTGCTACTCCACCAATCGCAAAGCCGCCTGTCGCAACTCCTCCCACT-ACGAAACCGCC 128
Query 3630 GGTTGCAACTCCACCAGTAGCAACTCCTCCTATCGCAAAGCCACC-AGTCGCAACGTCGC 3688
||| |||||||||||||||||||||||||||| || | || || | |||||| | | |
Sbjct 129 AGTTACAACTCCACCAGTAGCAACTCCTCCTATTGCTACTCCTCCTA-TCGCAAAGCCAC 187
Query 3689 CTATTGAA-ACTCCGCCCGTGGCAAAACCACC-AGTTACAACTCCACCTGTAGCAACTCC 3746
|||| | || ||||| || |||| ||||| | || ||| ||||| || ||||| ||
Sbjct 188 CTATC-ACTACACCGCCTGTTGCAACTCCACCTA-TTGCAAAACCACCAGTTGCAACACC 245
Query 3747 TCCCATCGTAAAACCACCTATTGTGACACCGCCTATTGCAACTCCACCCATCGCAAAGTC 3806
|| | || || |||||| | || | || | | ||||||| ||||| ||| |
Sbjct 246 GCCAACCGCAACACCACC-A--GT-A----GC--A----A-CTCCACCTATCGCTAAGCC 290
Query 3807 ACCAATCGCG-CCGCCGCCTA-TTGGTACTCCTCCTATTGCAAAACCACCAGTTGCGACA 3864
||| | || || || || | ||| || || ||||| ||||| ||||||| || |||
Sbjct 291 ACCCGTAGCAACC-CCACC-AGTTGCAACGCCACCTATAGCAAAGCCACCAGCTGTAACA 348
Query 3865 CCACCAACCGCAACTCCACCTGTTGCTACTTCTCCTATAGCAAAACCACCTGTTGCAACG 3924
||||| | |||||||| ||| |||| || | ||||| |||| ||||||| |||||||
Sbjct 349 CCACCTATTGCAACTCCTCCTATTGCAACACCGCCTATTGCAACACCACCTATTGCAACT 408
Query 3925 CCGCCACCTGCAACTCCGCCTGTTGCAAAACCACCGGTTGCAACACCACCCACCGTAACT 3984
||||| | ||| || |||||||||| |||||| ||||||||||| || |||| || |
Sbjct 409 CCGCCTGTTTCAAAGCCACCTGTTGCAACACCACCAGTTGCAACACCGCCAACCGCAA-T 467
Query 3985 -CCACCTGTTGCAACTCCTCCAATCGCAAAGCCACCCGGCGCA-CGGCCACCCGTTGCCA 4042
||||| || |||||||| || ||||| ||||| || | | | || || |||||||| |
Sbjct 468 GCCACCAGTAGCAACTCCACCTATCGCTAAGCCGCCTGTTGTAACG-CCGCCCGTTGCAA 526
Query 4043 CACCACCCGTAGCAACTCCACCTATCGCTAAGTCG-CCTGTTGCAACCCCACCTATGACA 4101
| || || | |||| |||||| | || || | ||| ||||||| || ||| | ||
Sbjct 527 CCCCGCCTATTGCAAAGCCACCTGTTGC-AACACCACCTATTGCAACTCCGCCTGTTTCA 585
Query 4102 AAGCCACCTGTTGCAAGTTCACCAATTGCAACTCCTCCAATCGCAAAAACACCCA-TCGC 4160
|||||||| ||||||| ||||| ||||||| || || | | ||| |||| | | ||
Sbjct 586 AAGCCACCGGTTGCAACACCACCAGTTGCAACACCACCCACCACAATGCCACC-AGTAGC 644
Query 4161 AACGCCACCTA 4171
||| |||||||
Sbjct 645 AACTCCACCTA 655
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 168062242368
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5