BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G22330.1
Length=2176
Score E
Sequences producing significant alignments: (Bits) Value
Ahg479746 jgi|Araly1|479746|fgenesh2_kg.3__2447__AT3G22330.1 3216 0.0
Ahg479744 jgi|Araly1|479744|fgenesh2_kg.3__2445__AT3G22310.1 1613 0.0
Ahg333427 jgi|Araly1|333427|fgenesh1_pm.C_scaffold_998000001 1267 0.0
> Ahg479746 jgi|Araly1|479746|fgenesh2_kg.3__2447__AT3G22330.1
Length=2110
Score = 3216 bits (1741), Expect = 0.0
Identities = 2015/2141 (94%), Gaps = 44/2141 (2%)
Strand=Plus/Plus
Query 2 GAACTAAAACCCTTTGCCTTCTTTCTTCATCTCTCTAAATCCCTAATTCTCCAAATTTTG 61
|||||||||||||||| | | |||| | |||||||||||||||||||||||||||||||
Sbjct 1 GAACTAAAACCCTTTG-C-T-TTTC-T--TCTCTCTAAATCCCTAATTCTCCAAATTTTG 54
Query 62 GGGTTTTACATTTT-CCTTATC-AAGAGAACACCTGAATCTGAAAATGATCACTACAGTG 119
|||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 55 GGGTTTTACATTTTCCCTTATCAAAGA-AACACCTGAATCTGAAAATGATCACTACAGTA 113
Query 120 CTACGACGATCTCTCCTTGATGCGTCGAAGAGGAATCTCTCCGCTTCGTTGACCTCAATC 179
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 114 CTACGTCGATCTCTCCTTGATGCGTCGAAGAGGAATCTCTCCGCTTCGTTGACCTCAATC 173
Query 180 AATACTGTTCTGTTTCACAACCTGGCCCCAGCCGCCACTAGAGTCTCCGACCTAGCCT-T 238
||| | | ||||||||||||||| || ||||||||| ||||||||||||| |||| || |
Sbjct 174 AATGCGGCTCTGTTTCACAACCTTGCTCCAGCCGCCGCTAGAGTCTCCGATCTAG-CTGT 232
Query 239 AATTGGATCTTCCGATGTCAAAG-CTGGGTTTCCGTTTGGTGTTGAAGCGAAAGGA-ATT 296
||| ||||||||||||||| ||| |||||||| | ||||||| ||||| | ||| ||
Sbjct 233 AATCGGATCTTCCGATGTC-AAGCCTGGGTTTTTATCTGGTGTTAAAGCG-AGGGAGTTT 290
Query 297 CATTTTCAATCTGGGCCGTTGGATTTTAGAGCTTCGATGGTTTC-TCAAGCTGGATTTGC 355
|||||| |||||||||| ||||| |||||||||||||||||||| || ||||| |||||
Sbjct 291 CATTTTGAATCTGGGCCTTTGGAGTTTAGAGCTTCGATGGTTTCTTC-TGCTGGGTTTGC 349
Query 356 GATCTCTGAGAGTAGCGAGAGAAGGGTTGGTGATTCGGAGAGTGTTGGTGGTGATGGGCT 415
|| ||||||||||||||||||||||| || |||||||||| ||||||||||
Sbjct 350 TATATCTGAGAGTAGCGAGAGAAGGGTCGGAGATTCGGAGA---------GTGATGGGCT 400
Query 416 TGCGATATCTGAGCTTGGGATATCTCCGGAGATTGTTAAAGCTTTGAGTAGTAAGGGTAT 475
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 401 TGCGATATCTGAGCTTGGAATATCTCCGGAGATTGTTAAAGCTTTGAGTAGTAAGGGTAT 460
Query 476 TGAGAAACTCTTTCCTATTCAGAAAGCTGTGCTGGAGCCAGCGATGGAGGGTCGAGATAT 535
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 461 TGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCTATGGAGGGTCGAGATAT 520
Query 536 GATTGGTCGTGCTAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCTATCATTGA 595
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 521 GATTGGTCGTGCTAGGACTGGAACGGGAAAGACACTTGCTTTTGGGATTCCAATCATTGA 580
Query 596 CAAAATCATCAAATACAACGCTAAACATGGACGAGGGAGGAATCCGCTTTGTTTGGTTTT 655
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 581 CAAAATCATCAAATACAACGCTAAACATGGACGAGGGAGGAATCCGCTTTGCTTGGTTTT 640
Query 656 GGCACCGACAAGAGAGCTTGCTCGCCAGGTTGAGAAGGAGTTTAGGGAGTCTGCTCCGAG 715
|||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 641 GGCACCGACAAGGGAGCTTGCTCGCCAGGTCGAGAAGGAGTTTAGGGAATCTGCTCCGAG 700
Query 716 CTTGGATACTATTTGTCTTTATGGAGGTACACCGATTGGACAGCAAATGAGGCAGCTTGA 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 701 CTTGGATACTATTTGTCTTTATGGAGGTACACCGATTGGACAGCAAATGAGGCAGCTTGA 760
Query 776 CTATGGTGTTGATGTGGCGGTTGGAACTCCAGGTCGTGTCATTGATCTGATGAAGAGAGG 835
|||||||||||||||||||||||||||||| |||||||| |||||||||||||| || ||
Sbjct 761 CTATGGTGTTGATGTGGCGGTTGGAACTCCTGGTCGTGTTATTGATCTGATGAAAAGGGG 820
Query 836 AGCTTTGAATCTATCGGAAGTTCAGTTTGTGGTTCTGGATGAAGCTGATCAGATGCTTCA 895
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct 821 AGCTTTGAATCTGTCAGAGGTTCAGTTTGTGGTTCTGGATGAAGCTGATCAGATGCTTCA 880
Query 896 AGTTGGATTTGCTGAGGATGTTGAAATAATATTGGAAAAGTTGCCTGAGAAACGTCAGAG 955
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 881 AGTTGGATTTGCCGAGGATGTTGAAATAATATTGGAAAAGTTGCCTGAGAAACGTCAGAG 940
Query 956 TATGATGTTTTCTGCAACAATGCCGAGTTGGATCAGATCTCTCACTAAGAAGTACCTGAA 1015
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 941 TATGATGTTTTCTGCTACAATGCCGAGTTGGATCAGATCTCTCACCAAGAAGTACCTGAA 1000
Query 1016 TAATCCTTTGACAGTTGATCTTGTTGGAGATTCTGATCAGAAACTAGCAGATGGAATTAC 1075
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1001 TAATCCTTTGACAATTGATCTTGTTGGAGATTCTGATCAGAAACTCGCAGATGGAATTAC 1060
Query 1076 GACATATTCTATCATAGCAGATTCTTATGGAAGAGCATCCATTATTGGTCCTCTTGTAAC 1135
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1061 GACGTATTCTATCATAGCAGATTCTTATGGAAGAGCATCCATTATTGGTCCTCTTGTAAC 1120
Query 1136 GGAGCATGCCAAAGGAGGAAAATGCATTGTTTTTACACAAACAAAACGAGATGCTGATCG 1195
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 AGAGCATGCTAAAGGAGGAAAATGCATTGTTTTTACACAAACAAAACGAGATGCTGATCG 1180
Query 1196 CCTTTCATATGCATTGGCTAGAAGCTTCAAATGTGAAGCTTTACACGGTGATATATCCCA 1255
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1181 CCTTTCATATGCATTGGCGAGAAGCTTCAAATGCGAAGCTTTACACGGTGATATATCCCA 1240
Query 1256 GAGTCAGAGGGAAAGAACGCTTGCTGGTTTCCGAGATGGGCATTTCAATATTCTTGTTGC 1315
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1241 GAGTCAGAGGGAAAGAACGCTTGCTGGTTTCCGAGATGGGCATTTTAATATTCTTGTTGC 1300
Query 1316 GACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTGATCATTCACTATGA 1375
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1301 AACTGATGTTGCTGCCCGTGGACTTGATGTGCCTAATGTTGATTTGATCATTCACTATGA 1360
Query 1376 GCTTCCTAATAACACGGAGACATTTGTCCATCGAACCGGGCGAACGGGTCGGGCTGGAAA 1435
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1361 GCTTCCTAATAACACGGAGACATTTGTTCATCGAACCGGGCGAACGGGTCGTGCTGGAAA 1420
Query 1436 GAAAGGAAGTGCTATTCTGATCTACAGTCAAGATCAATCCAGGGCTGTAAAAATAATTGA 1495
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1421 GAAAGGAAGTGCTATTCTCATCTACAGTCAAGATCAATCCAGGGCTGTAAAAATAATTGA 1480
Query 1496 GAGAGAAGTTGGGAGCCGATTCACTGAGCTCCCTAGCATTGCTGTGGAACGTGGAAGCGC 1555
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1481 GAGAGAAGTTGGGAGCCGATTCACCGAGCTCCCTAGCATTGCTGTGGAACGTGGAAGCGC 1540
Query 1556 AAGCATGTTTGAAGGAATAGGTTCTCGATCCGGTGGTTCCTTTGGAGGAGGCATGAGGGA 1615
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1541 AAGCATGTTTGAAGGAATAGGTTCTCGATCCGGTGGGTCCTTTGGAGGAGGCATGAGGGA 1600
Query 1616 TCGTGGTTCAAGCTTtggtggtcgttcaggcggtggtggttatggtggcagcagtggtgg 1675
||| ||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct 1601 TCGCGGTTCAAGCTTTGGTGGTCGTTCAGGCGGCGGC--T-ATGGTGGCAGCAGTGGTGG 1657
Query 1676 ttatggtggtggGCGTTCAGGCGGATCAAGCAACCGTTATTCTGGTGATTCTGACCGTTC 1735
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1658 CTATGGTGGTGGCCGTTCAGGCGGATCAAGCAACCGTTATTCTGGTGATTCTGACCGTTC 1717
Query 1736 TGGTTTTGGGAGCTTCGGTATGCGTTCTCCTGAGGGATATGGTTCGGATCGTTCATCTCA 1795
|||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct 1718 TGGTTTCGGGAGCTTCGGTATGCGTTCTCCTGAAGGATATGGTTCAGATCGTTCTTCTCA 1777
Query 1796 GTCAGGTGGAAGGAGCAGCTTTGGTGGTGGTCGTTCAGGCGGATCATCAAACAATCGTTC 1855
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1778 GTCAGGTGGAAGGAGCAGTTTTGGTGGTGGTCGTTCAGGCGGATCATCAAACAACCGTTC 1837
Query 1856 CTCTGGTTTCGGGGACTTTGGCTCTGACCGTTCTTCTCAGTCAGGCGGAAGGAGCAGCTT 1915
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1838 CTCTGGTTTTGGTGACTTTGGCTCTGACCGTTCTTCTCAGTCAGGCGGAAGGAGCAGCTT 1897
Query 1916 TGGTGGGTTTGGATCAAATGATGGGAAAAGATCTTACTGAGAGAAGTGTTTTTGGAGCCG 1975
|||||||||||| ||||| |||||||||||||| |||||||| | |||||||| | |||
Sbjct 1898 TGGTGGGTTTGGCTCAAACGATGGGAAAAGATCGTACTGAGA-A-GTGTTTTT--ACCCG 1953
Query 1976 AGCCGGCAATAATTGGTTTGACCCTAGGAGGAGGGAGGATTCGGTGA----CTCGAGTAG 2031
| ||||||||||||||||||||| |||||||||| | |||||||| |||||||||
Sbjct 1954 AACCGGCAATAATTGGTTTGACCTTAGGAGGAGG-A---TTCGGTGAGTGGCTCGAGTAG 2009
Query 2032 ATTAGTTACTACGGCGGATACGAAGGAGTCAAGTTATATATATAAA--TCTGTAGCTATG 2089
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2010 ATTAGTTACTACGGCGGATACGAAGGAGTCAAGTTATATATATAAAAATCTGTAGCTATG 2069
Query 2090 TAAAACAAACATATACTTTC-GAAGTTATGTTATCATCATT 2129
||||||||||| ||||||| |||||||||||||||| |||
Sbjct 2070 TAAAACAAACACATACTTTTTGAAGTTATGTTATCATTATT 2110
> Ahg479744 jgi|Araly1|479744|fgenesh2_kg.3__2445__AT3G22310.1
Length=2157
Score = 1613 bits (873), Expect = 0.0
Identities = 1099/1210 (91%), Gaps = 8/1210 (1%)
Strand=Plus/Plus
Query 401 TGGTGGTGATGGGCTTGCGATATCTGAGCTTGGGATATCTCCGGAGATTGTTAAAGCTTT 460
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 444 TGGTGGTGATGGGCTTGCGATATCTGAGCTTGGAATATCTCCGGAGATTGTTAAAGCTTT 503
Query 461 G-AGTAGTAAGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGCTGGAGCCAGCGA 519
| || ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 504 GAAG-GGTAGGGGTATTGAGAAACTCTTTCCTATTCAGAAAGCTGTGTTGGAGCCAGCGA 562
Query 520 TGGAGGGTCGAGATATGATTGGTCGTGCTAGGACTGGAACGGGAAAGACACTTGCTTTTG 579
|| | ||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct 563 TGCAAGGTCGTGATATGATTGGTCGTGCAAGGACTGGAACAGGAAAGACTCTTGCTTTTG 622
Query 580 GGATTCCTATCATTGACAAAATCATCAAATACAACGCTAAACATGGACGAGGGAGGAATC 639
|||||||| ||||||||||||||||||||| |||||||||||||||||| |||| |||||
Sbjct 623 GGATTCCTGTCATTGACAAAATCATCAAATTCAACGCTAAACATGGACGTGGGAAGAATC 682
Query 640 CGCTTTGTTTGGTTTTGGCACCGACAAGAGAGCTTGCTCGCCAGGTTGAGAAGGAGTTTA 699
| | || ||||||||||||||||| || || |||||||| |||||||||||||||||||
Sbjct 683 CTCAGTGCTTGGTTTTGGCACCGACGAGGGAACTTGCTCGTCAGGTTGAGAAGGAGTTTA 742
Query 700 GGGAGTCTGCTCCGAGCTTGGATACTATTTGTCTTTATGGAGGTACACCGATTGGACAGC 759
|||| |||||||| || ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 743 GGGAATCTGCTCCAAGTTTGGATACTATTTGTCTCTATGGAGGTACACCGATTGGGCAGC 802
Query 760 AAATGAGGCAGCTTGACTATGGTGTTGATGTGGCGGTTGGAACTCCAGGTCGTGTCATTG 819
|||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 803 AAATGAGGGAGCTTAACTATGGTATTGATGTGGCGGTTGGAACTCCAGGTCGTATCATTG 862
Query 820 ATCTGATGAAGAGAGGAGCTTTGAATCTATCGGAAGTTCAGTTTGTGGTTCTGGATGAAG 879
|||| ||||| |||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 863 ATCTTATGAAAAGAGGAGCTTTGAATCTATCAGAGGTTCAGTTTGTGGTTCTGGATGAAG 922
Query 880 CTGATCAGATGCTTCAAGTTGGATTTGCTGAGGATGTTGAAATAATATTGGAAAAGTTGC 939
|||||||||||||||||||||||||||| || ||||| |||||||||||| | |||||||
Sbjct 923 CTGATCAGATGCTTCAAGTTGGATTTGCGGAAGATGTCGAAATAATATTGCAGAAGTTGC 982
Query 940 CTGAGAAACGTCAGAGTATGATGTTTTCTGCAACAATGCCGAGTTGGATCAGATCTCTCA 999
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 983 CAGAGAAACGTCAGAGTATGATGTTTTCTGCAACAATGCCGAGTTGGATCAGATCTCTTA 1042
Query 1000 CTAAGAAGTACCTGAATAATCCTTTGACAGTTGATCTTGTTGGAGATTCTGATCAGAAAC 1059
| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 1043 CCAAGAAGTACCTGAACAATCCTTTGACAATTGATCTTGTTGGAGATTCGGATCAGAAAC 1102
Query 1060 TAGCAGATGGAATTACGACATATTCTATCA-TAGCAGATTCTTATGGAAGAGCATCCATT 1118
| |||||||| ||||| | ||||||||| | ||||||||||||||||||||||||||
Sbjct 1103 TTGCAGATGGGATTACTATGTATTCTATCGCT-GCAGATTCTTATGGAAGAGCATCCATC 1161
Query 1119 ATTGGTCCTCTTGTAA-CGGAGCATGCCAAAGGAGGAAAATGCATTGTTTTTACACAAAC 1177
|||||||||||||||| || |||||| |||||||||||| || ||||| ||||| |||||
Sbjct 1162 ATTGGTCCTCTTGTAAACG-AGCATGGCAAAGGAGGAAAGTGTATTGTCTTTACCCAAAC 1220
Query 1178 AAAACGAGATGCTGATCGCCTTTCATATGCATTGGCTAGAAGCTTCAAATGTGAAGCTTT 1237
|||||| ||||| ||||||||| ||| || |||||| | |||||||||||||||||||||
Sbjct 1221 AAAACGGGATGCGGATCGCCTTGCATTTGGATTGGCGAAAAGCTTCAAATGTGAAGCTTT 1280
Query 1238 ACACGGTGATATATCCCAGAG-TCAGAGGGAAAGAACGCTTGCTGGTTTCCGAGATGGGC 1296
||||||||| |||||||| || |||||| |||||||| |||||||| ||| | ||||||
Sbjct 1281 ACACGGTGACATATCCCA-AGCTCAGAGAGAAAGAACACTTGCTGGCTTCAGGGATGGGA 1339
Query 1297 ATTTCAATATTCTTGTTGCGACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCG 1356
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1340 ATTTCAATATTCTTGTTGCAACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCG 1399
Query 1357 ATTTGATCATTCACTATGAGCTTCCTAATAACACGGAGACATTTGTCCATCGAACCGGGC 1416
||||| | ||||| |||||||||||||||||||| ||||| ||||| || ||||| ||||
Sbjct 1400 ATTTGGTAATTCATTATGAGCTTCCTAATAACACTGAGACGTTTGTTCACCGAACGGGGC 1459
Query 1417 GAACGGGTCGGGCTGGAAAGAAAGGAAGTGCTATTCTGATCTACAGTCAAGATCAATCCA 1476
|||| ||||| ||||||||||||||||| || || || ||| || ||||||| ||||| |
Sbjct 1460 GAACAGGTCGTGCTGGAAAGAAAGGAAGCGCGATCCTCATCCACGGTCAAGAGCAATCTA 1519
Query 1477 GGGCTGTAAAAATAATTGAGAGAGAAGTTGGGAGCCGATTCACTGAGCTCCCTAGCATTG 1536
||||||| ||||| ||||||| ||||||||| ||| |||||| |||||||||||||||||
Sbjct 1520 GGGCTGTTAAAATGATTGAGAAAGAAGTTGGAAGCAGATTCAATGAGCTCCCTAGCATTG 1579
Query 1537 CTGTGGAACGTGGAAGCGCAAGCATGTTTGAAGGAATAGGTTCTCGATCCGGTGGTTCCT 1596
| ||||||||||||||||||||||||||||||||| ||||| || |||| ||||| ||||
Sbjct 1580 CGGTGGAACGTGGAAGCGCAAGCATGTTTGAAGGAGTAGGTGCTAGATCTGGTGGGTCCT 1639
Query 1597 TTGGAGGAGG 1606
||||||||||
Sbjct 1640 TTGGAGGAGG 1649
Score = 128 bits (69), Expect = 2e-28
Identities = 77/81 (95%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 1885 GTTCTTCTCAGTCAGGCGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAATGATGGGAAAA 1944
|||||||||||||| | |||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1877 GTTCTTCTCAGTCAAGTGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAACGATGGTAAAA 1936
Query 1945 GATCTTACTGAGAGAAGTGTT 1965
|||||||||||||||||||||
Sbjct 1937 GATCTTACTGAGAGAAGTGTT 1957
> Ahg333427 jgi|Araly1|333427|fgenesh1_pm.C_scaffold_998000001
Length=852
Score = 1267 bits (686), Expect = 0.0
Identities = 791/838 (94%), Gaps = 21/838 (3%)
Strand=Plus/Plus
Query 1136 GGAGCATGCCAAAGGAGGAAAATGCATTGTTTTTACACAAACAAAACGAGATGCTGATCG 1195
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 18 GGAGCATGCTAAAGGAGGAAAATGCATTGTTTTTACACAAACAAAACGAGATGCTGATCG 77
Query 1196 CCTTTCATATGCATTGGCTAGAAGCTTCAAATGTGAAGCTTTACACGGTGATATATCCCA 1255
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 78 CCTTTCATATGCATTGGCGAGAAGCTTCAAATGCGAAGCTTTACACGGTGATATATCCCA 137
Query 1256 GAGTCAGAGGGAAAGAACGCTTGCTGGTTTCCGAGATGGGCATTTCAATATTCTTGTTGC 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 138 GAGTCAGAGGGAAAGAACGCTTGCTGGTTTCCGAGATGGGCATTTCAATATTCTTGTTGC 197
Query 1316 GACTGATGTTGCTGCCCGTGGACTTGATGTACCTAATGTCGATTTGATCATTCACTATGA 1375
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 198 AACTGATGTTGCTGCCCGTGGACTTGATGTGCCTAATGTCGATTTGATCATTCACTATGA 257
Query 1376 GCTTCCTAATAACACGGAGACATTTGTCCATCGAACCGGGCGAACGGGTCGGGCTGGAAA 1435
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 258 GCTTCCTAATAACACGGAGACATTTGTTCATCGAACCGGGCGAACGGGTCGTGCTGGAAA 317
Query 1436 GAAAGGAAGTGCTATTCTGATCTACAGTCAAGATCAATCCAGGGCTGTAAAAATAATTGA 1495
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 318 GAAAGGAAGTGCTATTCTCATCTACAGTCAAGATCAATCCAGGGCTGTAAAAATAATTGA 377
Query 1496 GAGAGAAGTTGGGAGCCGATTCACTGAGCTCCCTAGCATTGCTGTGGAACGTGGAAGCGC 1555
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 378 GAGAGAAGTTGGGAGCCGATTCACCGAGCTCCCTAGCATTGCTGTGGAACGTGGAAGCGC 437
Query 1556 AAGCATGTTTGAAGGAATAGGTTCTCGATCCGGTGGTTCCTTTGGAGGAGGCATGAGGGA 1615
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 438 AAGCATGTTTGAAGGAATAGGTTCTCGATCCGGTGGGTCCTTTGGAGGAGGCATGAGGGA 497
Query 1616 TCGTGGTTCAAGCTTtggtggtcgttcaggcggtggtggttatggtggcagcagtggtgg 1675
||| ||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct 498 TCGCGGTTCAAGCTTTGGTGGTCGTTCAGGCGGCGGC--T-ATGGTGGCAGCAGTGGTGG 554
Query 1676 ttatggtggtggGCGTTCAGGCGGATCAAGCAACCGTTATTCTGGTGATTCTGACCGTTC 1735
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 CTATGGTGGTGGCCGTTCAGGCGGATCAAGCAACCGTTATTCTGGTGATTCTGACCGTTC 614
Query 1736 TGGTTTTGGGAGCTTCGGTATGCGTTCTCCTGAGGGATATGGTTCGGATCGTTCATCTCA 1795
|||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct 615 TGGTTTCGGGAGCTTCGGTATGCGTTCTCCTGAAGGATATGGTTCAGATCGTTCTTCTCA 674
Query 1796 GTCAGGTGGAAGGAGCAGCTTTGGTGGTGGTCGTTCAGG---------C-G----G---- 1837
||||||||||||||||||||||||||||||||||||||| | | |
Sbjct 675 GTCAGGTGGAAGGAGCAGCTTTGGTGGTGGTCGTTCAGGTGATTATGGCCGTTCAGGCGG 734
Query 1838 ATCATCAAACAATCGTTCCTCTGGTTTCGGGGACTTTGGCTCTGACCGTTCTTCTCAGTC 1897
|||||||| ||| |||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 735 ATCATCAAGCAACCGTTCCTCTGGTTTTGGTGACTTTGGCTCTGACCGTTCTTCTCAGTC 794
Query 1898 AGGCGGAAGGAGCAGCTTTGGTGGGTTTGGATCAAATGATGGGAAAAGATCTTACTGA 1955
|||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||
Sbjct 795 AGGCGGAAGGAGCAGCTTTGGTGGGTTTGGCTCAAACGATGGGAAAAGATCATACTGA 852
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81894026750
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5