BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G22870.1
Length=1242
Score E
Sequences producing significant alignments: (Bits) Value
Ahg905324 jgi|Araly1|905324|Al_scaffold_0003_2452 1297 0.0
Ahg934582 jgi|Araly1|934582|scaffold_402570.1 355 4e-97
Ahg925743 jgi|Araly1|925743|scaffold_201304.1 191 1e-47
Ahg934583 jgi|Araly1|934583|scaffold_402571.1 167 2e-40
Ahg908078 jgi|Araly1|908078|Al_scaffold_0002_1159 159 3e-38
Ahg925736 jgi|Araly1|925736|scaffold_201297.1 147 3e-34
Ahg314297 jgi|Araly1|314297|fgenesh1_pm.C_scaffold_1003077 87.9 2e-16
Ahg482868 jgi|Araly1|482868|fgenesh2_kg.4__1928__AT2G38590.1 80.5 3e-14
Ahg480740 jgi|Araly1|480740|fgenesh2_kg.3__3441__AT2G18320.1 54.7 2e-06
> Ahg905324 jgi|Araly1|905324|Al_scaffold_0003_2452
Length=1212
Score = 1297 bits (702), Expect = 0.0
Identities = 1056/1221 (86%), Gaps = 47/1221 (4%)
Strand=Plus/Plus
Query 1 ATGACGTTGACGATCTCCGATCTTCCAAGGGATCTG--A-AGAAGAAAATATTCTCAAGA 57
|||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||
Sbjct 1 ATGACGTTGACGATCTCCGATCTTCCAAGGGATCTGCTAGAGAAGGAAATATTCTCAAGA 60
Query 58 ATTCCGTTGAGATATGTGAGAGCATTGCGATTAACCTGCAAAGAGTGGGAAACTTTAATC 117
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ATACCGTTGAAATATGTGAGAGCATTGCGATTAACCTGCAAAGAGTGGGAAACTTTAATC 120
Query 118 AAAAGTCGGAGCTTAAAGATCGACGAAGAGGAGTCTCAGATGGTCGCGTTGATGGATTAC 177
|||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 121 AAAAGTCGGAGCTTAACGATCGACGAAGAGGAGTCTCAGATGATCGTGTTGATGGATTAC 180
Query 178 AATCTTTGTTTAATGAGCAAATCCTTTAATGGAGGAGATCCATCTACAGAGATTAAAGGC 237
||||||||||||||||||| |||| | ||||||||||| |||||||||||||||| |||
Sbjct 181 AATCTTTGTTTAATGAGCATATCCATGAATGGAGGAGAACCATCTACAGAGATTAGAGGT 240
Query 238 AAACTTACTTGCTTTGACGAACAAGTAAAGGTATCT-ATGTTGTTTCATTGCGAGGGTTT 296
|||||||||||| ||||||||||||| ||| ||||| | || |||||||||||||||||
Sbjct 241 AAACTTACTTGCCTTGACGAACAAGTCAAGATATCTCAA-TTCTTTCATTGCGAGGGTTT 299
Query 297 ATTGTTATGCATCTTGAAAGACGATAATACTAAGGTTGTTGTTTGGAATCCGTATTTGGG 356
|||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||
Sbjct 300 ATTGTTATGCATCTTGAAAGACGATA---CTAAGGTTGTGGTTTGGAATCCATATTGGGG 356
Query 357 GCAAAGAAGGTTTATCCAAGTTAGATTTTCACACATCCCAGGCGGATGGGACCAGTTCAG 416
||||| |||| | |||||| ||||||||||||| ||||||||| |||| | |||
Sbjct 357 GCAAACAAGGATGATCCAACCCAGATTTTCACACAGGCCAGGCGGAACGGACTGGATCAA 416
Query 417 TTACGCTCTCGGATACTACAAGAATAATAATATGATGAAATCATTTAAACTCTTGAGGTT 476
||| ||||||||||||||| ||||||||| || ||||||||| | |||| ||||||||||
Sbjct 417 TTATGCTCTCGGATACTACGAGAATAATAGTAAGATGAAATCCTGTAAATTCTTGAGGTT 476
Query 477 TTTTGATTATTT---CTATA-CCT--CC---A--AT-GA-----TTTTGTTTTC-TATGA 518
||| |||||||| ||||| || || | | || |||| |||| |||||
Sbjct 477 TTTAGATTATTTTTACTATATCCCAGCCCCCACCAAAGAAAAGATTTTTTTTTGGTATGA 536
Query 519 AATCTATGATTTCGACTCTGGTTTATGGAAAACTCTTGATGTCACTCCATACTGGCGTAT 578
|||||| ||||| ||| |||||||||||| ||||||||||||||| ||| ||||||||||
Sbjct 537 AATCTACGATTTTGACACTGGTTTATGGACAACTCTTGATGTCACCCCACACTGGCGTAT 596
Query 579 AAGGTTTTTTGATGA-TATTGGCGTTTCTCTCAAGGGAAACACTTACTGGTGCGCTAAAG 637
||||||| ||| | ||| |||||||||||||||||||||||||| ||||| |||| ||
Sbjct 597 AAGGTTT---GATAACTAT-GGCGTTTCTCTCAAGGGAAACACTTATTGGTGTGCTACAG 652
Query 638 AAAGGAAGCCAGAGTGGAACGCAGACCCTTTTATCATTGTTGATCACATCATCTGTTTTG 697
||||||| || || | |||||||||| ||| |||||||||||||||||||||||
Sbjct 653 AAAGGAACCC----TG---C--AGACCCTTTTCTCAATGTTGATCACATCATCTGTTTTG 703
Query 698 ATTTTACAAGTGAGAGGTTTGGTCCGCTTGTGCCTTTGCCGTTTAGAGCTATGAAGGAGA 757
| ||||||||||||||||||||||||||| ||||||||||||||||| ||| | | | |
Sbjct 704 ACTTTACAAGTGAGAGGTTTGGTCCGCTTCTGCCTTTGCCGTTTAGAACTACGTATTACA 763
Query 758 GTCTTGTGACTCTATCTTGTGTTAGGGAAGAGAAGCTTGCTGCTTTATTTTGTCGCGATG 817
|||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 764 ACCTTGTGACCCTATCTTGTGTTAGGGAAGAGAAGCTTGCTGCTTTATTTTGCCACGATG 823
Query 818 TTGTTGTTGAGGTATGGATTACGACTACGATTGAATTCGATAAGGTGTCGTGGAGCAAGT 877
| |||||||||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct 824 GTATTGTTGAGGTATGGATTACGACTAATATTGAGGCCAATAAGGTGTCGTGGAGCAAGT 883
Query 878 TTTTGACCTTTGGTGTGCGTGACTGCCCGATGATTTATTC-TTGTACAGGGAGTTTCTTC 936
| ||||| |||| |||| |||||| || | |||| | || |||||||| |||||||||
Sbjct 884 TCTTGACTTTTGATGTGGGTGACTACC-G--GATT-AGTCCTTGTACAGATAGTTTCTTC 939
Query 937 ATTGACGAGGTGAACAAAGTCGCCGTGATTTTCGGGCAACCGTTGAAACGCGACAAAGTT 996
|||||||||||||||||||||||| ||||||| | || ||| ||| || ||| ||||
Sbjct 940 ATTGACGAGGTGAACAAAGTCGCCATGATTTTTGATAAAACGTGGAATTGCAACACAGTT 999
Query 997 TTCATCATTGGAGAGGCTGGACAAGTCCGAGATGTTGATCTCGGAGAACCTGCCCACCAA 1056
|||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1000 ACCATCATTGGAGAAGCTGGATACGTCCGAGATGTTGATCTCGGAGAACCTGCCCACCAA 1059
Query 1057 GATAGTTGGCTATATG-TGTGTCCTTATGTTCCAAGTTTAGTGAAAATCAAGCAACCTCC 1115
|||||| ||||| || |||||||||||||||||||||||||| |||||||| ||||| |
Sbjct 1060 AATAGTTTGCTAT-TGGTGTGTCCTTATGTTCCAAGTTTAGTGCAAATCAAGAAACCTGC 1118
Query 1116 AGGATGCAAAAGGAGAAGACAAAGCAGTTCAGAAAACCGTCGATATAAGCGAAACATGAT 1175
| |||||||||||| |||||||||||||| |||||||| || |||||||||||||||| |
Sbjct 1119 ACGATGCAAAAGGAAAAGACAAAGCAGTTTAGAAAACCATCAATATAAGCGAAACATGGT 1178
Query 1176 GAGACTTGTCGAACTTGAAAA 1196
||||||||||| ||| ||||
Sbjct 1179 GAGACTTGTCGCTCTTAAAAA 1199
> Ahg934582 jgi|Araly1|934582|scaffold_402570.1
Length=1276
Score = 355 bits (192), Expect = 4e-97
Identities = 823/1110 (74%), Gaps = 114/1110 (10%)
Strand=Plus/Plus
Query 142 GAAGAGGAGTCTCA-GATGGTCGCGTTGATGGATTACAATCTTTGTTTAATGAGCAAATC 200
|||||||| ||| | |||||||||| ||||| ||| |||||| || |||||| ||
Sbjct 192 GAAGAGGATTCT-ATGATGGTCGCGATGATGAATTTTGATCTTTATTCAATGAG--GGTC 248
Query 201 CT--TTAATGGA-GGAGATCCATCTACAGAGATTAAAGGCAAACTTACTTGCTTTGACGA 257
| || | || | |||||||||| || | ||||| | |||| || || | |||| ||
Sbjct 249 GTAGTTGA-CGACGTTGATCCATCTATAGCGTTTAAACGTAAACCTAGTTTCCTTGAAGA 307
Query 258 ACAAGTAAAGGTATCT-ATGTTGTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAG 316
|||||| ||||||||| | | | ||||| || |||||||||||| |||||||||| ||||
Sbjct 308 ACAAGTCAAGGTATCTCAAG-TCTTTCACTGTGAGGGTTTATTGCTATGCATCTTCAAAG 366
Query 317 ACGATAATACTAAGGTTGTTGTTTGGAATCCGTATTTG-GGGCAAAGAAGGTTTATCCAA 375
|| |||||||||||||| |||||||||||||| ||| ||| ||| ||||| ||| ||
Sbjct 367 AC---AATACTAAGGTTGTGGTTTGGAATCCGTA-TTGCGGGGAAACAAGGTGGATCGAA 422
Query 376 GTTAGATTTTCACA-CATCCCAGGCGGATGGGACCA-GTTCAGTTACGCTCTCGGATACT 433
|||||||| || | ||| ||| || ||||| || ||||||||| ||||| || | |
Sbjct 423 CCAAGATTTTCTCATCGTCCAAGG-GGGTGGGA-CAGGTTCAGTTATGCTCTAGG--A-T 477
Query 434 ACAAGAATAA-TAAT-ATGATGAAATCATTTAAACTCTTGAGGTTTTTTGATTA-TT-T- 488
||||| |||| ||| || ||| | | |||||| |||||||||| | ||||| || |
Sbjct 478 ACAAGGATAAGGAATCTTG-TGATAGC-TTTAAATTCTTGAGGTTCATAGATTATTTCTG 535
Query 489 CTAT--A-CCTCCAAT-GATTTTGTTTTCTATGAAATCTATGATTTCGACTCTGGTTTAT 544
|| | | || ||| ||||| ||| ||||||||||||||||| ||||||| || ||
Sbjct 536 CTTTGCACCCGAAAATCAATTTT-TTTGGTATGAAATCTATGATTTTGACTCTGATTCAT 594
Query 545 GGAAAACTCTTGATGTCACTCCATACTGGCGTATAAGGTTTTTTGATGATATTGGCGTTT 604
||| ||||||||||||||||||| ||||| |||||| | |||| | | |||| ||
Sbjct 595 GGACAACTCTTGATGTCACTCCAAACTGGTGTATAA---TGTTTGCTAACCTTGGTATTA 651
Query 605 CTCTCAAGGGAAACACTTACTGGTGCGCTAAAGAAAGGAAGCCAGAGTGGAACGCAGACC 664
||||||| ||||||||||||||||| ||| | || | | | ||||| ||||
Sbjct 652 CTCTCAAAGGAAACACTTACTGGTGTGCT---G---GG--G--A-A-AGGAACTCAGA-- 697
Query 665 CTTTTATCATTGTTGATCACATCATCTGTTTTGATTTTACAAGTGAGAGGTTTGGTCCGC 724
| || |||| |||||||| |||||||||||||||||||| ||||| ||||| ||||
Sbjct 698 AGATGAT-ATTGCCGATCACATAATCTGTTTTGATTTTACAAGCGAGAGATTTGGACCGC 756
Query 725 TTGTGCCTTTGCCGTTTAGAGCT-A-TGA--AGGAG-A-GTCT-TGTGACTCTATCTTGT 777
|| | ||| ||||| ||| | | | || | ||| | | | ||||||| ||||||||
Sbjct 757 TTTTACCTCTGCCGACTAGCG-TCAGGGATCATGAGTATGAATATGTGACTTTATCTTGT 815
Query 778 GTTAGGGAAGAGAAGCTTGCTGCTTTATTTT-GT-CG-CGA-TGT--T--GT-TG---TT 825
|||||||||||||||||||| ||||||||| | | ||| | | || || ||
Sbjct 816 GTTAGGGAAGAGAAGCTTGCAGCTTTATTTCAGCACAACGAATCAAATCCGTATGAGCTT 875
Query 826 GAGGTATGGATTACGACT-ACGATTGAATTC-GATAA-GGTGTCGTGGAGCAAGTTTTTG 882
||| |||||||||| ||| | |||| ||| | || || |||||||||||||||||| |||
Sbjct 876 GAGATATGGATTACAACTGA-GATT-AATGCCGA-AATGGTGTCGTGGAGCAAGTTCTTG 932
Query 883 ACCTTTGGTGTGC-GTGACTGCCCG-AT-GAT-TTATTCTTGTACAGGGA-G-TTTCTTC 936
| | || | | | ||| | | || || || ||| || |||| | |||||||
Sbjct 933 ATGAT-GGA-TACCG-GAC--CTAGGATAGAGGTTCCACTTATAT-GGGAAGGTTTCTTC 986
Query 937 ATTGACGAGGTGAACA-AAGTCGCCGTGA-TTTTCGG-GCAACCGTTGAAACGCGACAA- 992
|||||||||| ||| | || |||| || |||| | | || ||| | || | ||
Sbjct 987 ATTGACGAGGAGAAGAGAAA-CGCCATGGGTTTT-GACG-AAGAGTTCAGTCGTAA-AAC 1042
Query 993 AGTTT-TCATCATTGGAGAGGCTGGACAAGTCCGAGATGTTG-ATCTCGGAGAACCTGCC 1050
| ||| |||||||||||||||||||| | || || | ||| || | |||| | | |
Sbjct 1043 A-TTTATCATCATTGGAGAGGCTGGATACGTAAGAAAA-TTGGATATTGGAGTA---GAC 1097
Query 1051 CACCAAGATAGTTGGCTATATGTGTG-TCCTTATGTTCCAAGTTTAGTGAAAATCAAGCA 1109
| | ||| || | | | | ||||| || ||||||||||||||| || |||||||| |
Sbjct 1098 -AT-A-GATTGTCGACCAAAAGTGTGCTC-TTATGTTCCAAGTTTGGTCCAAATCAAGAA 1153
Query 1110 ACCTCCAGGATGCAAAAGGAGAAGACAAAGCAG-TTCAGAAAACCG-TCGATATAAGCGA 1167
|||| ||||| | ||||||| |||||||||||| || ||||| | | || || | ||| |
Sbjct 1154 ACCTGCAGGAGGAAAAAGGAAAAGACAAAGCAGCTT-AGAAA-CGGGTCTATTTGAGCAA 1211
Query 1168 AACATGATGAGACTTGTCGAACTTGAAAAG 1197
|||||| ||||||||| | | ||||||||
Sbjct 1212 AACATGTTGAGACTTGAAGCATTTGAAAAG 1241
> Ahg925743 jgi|Araly1|925743|scaffold_201304.1
Length=1229
Score = 191 bits (103), Expect = 1e-47
Identities = 562/770 (73%), Gaps = 85/770 (11%)
Strand=Plus/Plus
Query 152 CTCAGATGGTCGCGTTGATGGATTACAATCTTTGTTTAATGAGCA-AATCCTTTAATGGA 210
|||||||| ||| | |||||||||||||| ||| ||||||| ||| ||| | || ||
Sbjct 203 CTCAGATGATCGTGATGATGGATTACAATGTTTATTTAATGGGCATGGTCC-TCGAT-GA 260
Query 211 GGAGATCCATCTACAGAGATTAAAGGCAAACTTACTTG-CT--TTG--AC-GAACAAGTA 264
| |||| || | |||| || ||| ||||||||||| || || || |||||||
Sbjct 261 --AAATCCTTCCAAAGAGTTTCTAGGTAAACTTACTTGCCTAGATGATACAAAACAAGTC 318
Query 265 AAGGTATCT-ATGTTGTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAGACGATAA 323
||| ||||| | | | |||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 319 AAGATATCTCAAG-TCTTTCATTGTGAGGGTTTATTGTTATGCATCTTGAAAGACGATGA 377
Query 324 TACTAAGGTTGTTGTTTGGAATCCGTATTTGGGGCAAAGAAGGTTTATCCAAGTTAGATT 383
||||||| |||| ||||||||||||||||||||||||| ||| | |||||| ||| |
Sbjct 378 TACTAAGATTGTGGTTTGGAATCCGTATTTGGGGCAAACAAGATGGATCCAAACCAGAAT 437
Query 384 TTCAC-ACATCCC-AGGCGGATGG---G-ACCAGTTCAGTTACGCTCTCGGATACTACAA 437
| | || | | || |||||| | || | ||| |||||||||||||| | ||
Sbjct 438 GT-ATGACGGCGCTAGT-GGATGGAAAGGACGAAAGAAGT-ACGCTCTCGGATACGAAAA 494
Query 438 GAATAAT-AATATGATGAAAT-CATT-TA-----AAC-TCTTGAGGTTTTTTGATTATTT 488
|||| | || | | || | | || || || |||||||| || | ||| ||||
Sbjct 495 TAATAGTGAAAAC-A-GATCTTC-TTGTAGCCCCAAAATCTTGAGGGTTATAGATAATTT 551
Query 489 CTATACCT---C-C-AATGATTTTGTTTTC-TAT--GAAATCTATGATTTCGACTCTGGT 540
| | |||| | | || | |||| ||| |||||||||||||| || |||| |
Sbjct 552 C-A-ACCTTTTCACCAAAAACACCATTTTAGTATATGAAATCTATGATTTTGATTCTGAT 609
Query 541 TTATGGAAAACTCTTGATGTCACTCCATACTGGCGTATAAGGTTTTTTGATGATATTGGC 600
||||||| |||||||||||| ||||| | ||| ||||||||| | | || |||
Sbjct 610 TTATGGACTACTCTTGATGTCTCTCCACAATGGTGTATAAGGTCTCA--ACGA----GGC 663
Query 601 GTTTCTCTCAAGGGAAACACTTACTGGTGCGCTAAAGAAAGGAAGC-CAGAGTGGAACGC 659
|||||||||||||||||||||||||| | ||||||||| || || || | ||
Sbjct 664 CTTTCTCTCAAGGGAAACACTTACTGGGGTGCTAAAGAACGGC-GCGCACA------CG- 715
Query 660 AGACCCTTTTATCATTGTTGATCACATCATCTGTTTTGATTTTACAAGTGAGAGGTTTGG 719
||||| || ||||| || | || | ||||||||||||||||| ||||| |||||
Sbjct 716 -GACCCATTGATCAT-----AT-A-AT--T-TGTTTTGATTTTACAAGAGAGAGATTTGG 764
Query 720 TCCGCTTGTGCCTTTGCCGTTTAGAGCTATGAAGGAG-A-G-TCTTGTGACTCTATCTT- 775
|||||| ||||| |||| ||||| ||| || || | | | | ||| | | |||||||
Sbjct 765 ACCGCTTCTGCCTCTGCCATTTAGTGCT-TGG-GGTGCACGGT-TTGCGTCACTATCTTC 821
Query 776 GTGTTAGGGAAGAGAAGCTTGCTGCTTTATTTT-GTC--GCGATGT-TGTTG-TT-GAGG 829
| ||||| ||||| ||| | ||||||||||| | |||| | | || |||
Sbjct 822 G-GTTAGAGAAGAAAAGATCACTGCTTTATTTCAGAAAAGCGAAACATATAAATTTGAGA 880
Query 830 TATGGATTACGACTACGATTGAATTCGATAAGGTGTCGTGGAGCAAGTTT 879
|||||||||||||||||||||| | | || ||| |||||||||| |||
Sbjct 881 TATGGATTACGACTACGATTGAGGCCAACAATGTGACGTGGAGCAA-TTT 929
> Ahg934583 jgi|Araly1|934583|scaffold_402571.1
Length=1244
Score = 167 bits (90), Expect = 2e-40
Identities = 290/380 (76%), Gaps = 39/380 (10%)
Strand=Plus/Plus
Query 289 GAGGGTTT-ATTGTTATGCATCTTGAAAGACGATAATACTAAGG-TTGTTGTTTGGAATC 346
|||||||| ||| ||||||||||||||||||| | |||| ||| |||| ||||||||||
Sbjct 334 GAGGGTTTAATT-TTATGCATCTTGAAAGACG-T--TACT-AGGATTGTGGTTTGGAATC 388
Query 347 CGTATTTGGGGCAAAGAAGGTTTATCCAA-GTTAGATTTTCACA-CATCCCAGGCGGATG 404
| ||||| ||||||| ||||| || ||| | |||||||| || | | ||| ||||
Sbjct 389 CCTATTTAGGGCAAACAAGGTGGAT-CAACCTCAGATTTTCTCACCGT-CCACATAGATG 446
Query 405 GGACCAGTTCAGTTACGCTCTCGGATACTACAAGAAT-AATAATAT-GAT-GAAATCATT 461
|||| ||||| ||| |||||||| | ||| || || || ||| | | | | || |
Sbjct 447 GGACTGGTTCAATTATGCTCTCGG--A-TACGAGGATAAAGAATCTCG-TCG-TGGCA-T 500
Query 462 TAAACTCTTGAGGTTTTTTGATTA-TTTC-TATA-C-CTCC----AATGATTTTGTTTTC 513
|||| | |||||||| || ||||| |||| | | | | || || ||||| |||
Sbjct 501 TAAATTGTTGAGGTTCTTAGATTATTTTCACAAAGCAC-CCGAAAAACAATTTT-TTTGG 558
Query 514 TATGAAATCTATGATTTCGACTCTGGTTTATGGAAAACTCTTGATGTCACTCCATACTGG 573
||||||||||| ||||| ||||| || ||||||| |||||||||||||| |||| |||||
Sbjct 559 TATGAAATCTACGATTTTGACTCAGGGTTATGGACAACTCTTGATGTCATTCCACACTGG 618
Query 574 CGTATAAGGT-TTTTTGATGATATTGGCGTTTCTCTCAAGGGAAACACTTACTGGTGC-G 631
|||| | | || || | | | | |||||||||||||||||||||||||||||| | |
Sbjct 619 GGTAT-A--TATTGTTCAAGCCA-TAGCGTTTCTCTCAAGGGAAACACTTACTGGT-CTG 673
Query 632 CTAAAGAAAGGAAGC-CAGA 650
| | |||||| |||| ||||
Sbjct 674 CGACAGAAAG-AAGCTCAGA 692
> Ahg908078 jgi|Araly1|908078|Al_scaffold_0002_1159
Length=1608
Score = 159 bits (86), Expect = 3e-38
Identities = 190/238 (80%), Gaps = 15/238 (6%)
Strand=Plus/Plus
Query 147 GGAGTCTCAGATGGTCGCGTTGATGGATTACAATCTTTGTTTAATGAGCAAAT-CCTTTA 205
|||| ||| |||| ||| | |||||||||||||| ||| ||||||| | || | | | |
Sbjct 588 GGAGACTCGGATGATCGTGATGATGGATTACAATGTTTATTTAATG-GGAATTGTCGTCA 646
Query 206 ATGGAGGAGATCCATCTACAGAGAT-TAAAGGCAAACTTACTTG-CT--TTGA--C-GAA 258
|| || | || |||| |||||| | | ||| ||||||||||| || || | |||
Sbjct 647 AT-GA--AAATACATCCACAGAG-TCTCTAGGTAAACTTACTTGCCTAGACGATTCAGAA 702
Query 259 CAAGTAAAGGTATCT-ATGTTGTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAGA 317
||||| ||| ||||| | | | |||||||| || ||||||||||||||||||||||||||
Sbjct 703 CAAGTCAAGATATCTCAAG-TCTTTCATTGTGACGGTTTATTGTTATGCATCTTGAAAGA 761
Query 318 CGATAATACTAAGGTTGTTGTTTGGAATCCGTATTTGGGGCAAAGAAGGTTTATCCAA 375
|||| |||||||| |||| ||||||||||||||||||||||||| ||| | ||||||
Sbjct 762 CGATGATACTAAGATTGTGGTTTGGAATCCGTATTTGGGGCAAACAAGATGGATCCAA 819
> Ahg925736 jgi|Araly1|925736|scaffold_201297.1
Length=1231
Score = 147 bits (79), Expect = 3e-34
Identities = 166/205 (81%), Gaps = 17/205 (8%)
Strand=Plus/Plus
Query 167 TGATGGATTACAATCTTTGTTTAATGAGCA-AATCCTTTAATGGAGGAGATCCATCTACA 225
|||||||||||||| ||| ||||||| ||| ||| | ||| || | ||||||| |||
Sbjct 220 TGATGGATTACAATGTTTATTTAATGGGCATTGTCC-TCAAT-GA--AAATCCATCCACA 275
Query 226 GAGAT-TAAAGGCAAACTTACTTG-CT--TTGA--C-GAACAAGT--AAAGGTATCTATG 276
||| | | || |||||||| || || || | |||||||| ||| |||| | |
Sbjct 276 GAG-TCTCTAGATAAACTTACGTGCCTACAAGATTCAGAACAAGTCAAAATTTATC-AAG 333
Query 277 TTGTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAGACGATAATACTAAGGTTGTT 336
| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 334 -TCTTTCATTGTGAGGGTTTATTGTTATGCATCTTGAAAGATGATGATACTAAGGTTGTT 392
Query 337 GTTTGGAATCCGTATTTGGGGCAAA 361
|||||||||||||||||||||||||
Sbjct 393 GTTTGGAATCCGTATTTGGGGCAAA 417
> Ahg314297 jgi|Araly1|314297|fgenesh1_pm.C_scaffold_1003077
Length=1167
Score = 87.9 bits (47), Expect = 2e-16
Identities = 97/119 (82%), Gaps = 12/119 (10%)
Strand=Plus/Plus
Query 213 AGATCCATCTACAGAGATTAAAGGCAAACTTACTTG-----CT-TTGACG-AACAAGTAA 265
|||||||| ||||||| |||||| ||||||||||| || |||| | | ||||| |
Sbjct 252 AGATCCATATACAGAGCCTAAAGGTAAACTTACTTGCCTTACTCTTGA-GCACCAAGTCA 310
Query 266 AGGTATCT-ATGTTGTTTCAT-TGCGAGGGTTTATTGTTATGCATCTTGAAAGACGATA 322
|| ||||| | | | |||| | || ||||||||||||||||||||||||||||||||||
Sbjct 311 AGATATCTCAAG-TCTTTC-TATGTGAGGGTTTATTGTTATGCATCTTGAAAGACGATA 367
> Ahg482868 jgi|Araly1|482868|fgenesh2_kg.4__1928__AT2G38590.1
Length=973
Score = 80.5 bits (43), Expect = 3e-14
Identities = 92/115 (80%), Gaps = 5/115 (4%)
Strand=Plus/Plus
Query 219 ATCTACAGAGATTAAAGGCAAA-CTTACTTGCTTTGACGAACAAGTAAAGGTATCT-ATG 276
||||| || | ||||| | ||| ||| || | |||| |||||||| ||| ||||| | |
Sbjct 288 ATCTATAGCGTTTAAACGTAAACCTT-GTTTCCTTGATGAACAAGTCAAGATATCTCAAG 346
Query 277 TTGTTTCATTGCGAGGGTTTATTGTTATGCATCTTGAAAGACGATAATACTAAGG 331
| ||||| || ||||||||||||||||||||||||||||| || |||| ||||
Sbjct 347 -TCTTTCACTGTGAGGGTTTATTGTTATGCATCTTGAAAGAAGACGATAC-AAGG 399
> Ahg480740 jgi|Araly1|480740|fgenesh2_kg.3__3441__AT2G18320.1
Length=1035
Score = 54.7 bits (29), Expect = 2e-06
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Plus
Query 1079 CTTATGTTCCAAGTTTAGTGAAAATCAAG 1107
|||||||||||||||||||||||||||||
Sbjct 992 CTTATGTTCCAAGTTTAGTGAAAATCAAG 1020
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 46395589989
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5