BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G23120.1
Length=2355
Score E
Sequences producing significant alignments: (Bits) Value
Ahg930319 jgi|Araly1|930319|scaffold_302776.1 3430 0.0
Ahg479821 jgi|Araly1|479821|fgenesh2_kg.3__2522__AT3G23110.1 601 9e-171
> Ahg930319 jgi|Araly1|930319|scaffold_302776.1
Length=2415
Score = 3430 bits (1857), Expect = 0.0
Identities = 2214/2383 (93%), Gaps = 38/2383 (2%)
Strand=Plus/Plus
Query 1 ATGATTCGAAGCCAATCTTATTGCTTTCTTGGTATTACTATTACCATCTATTTCTTCTTT 60
|||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 23 ATGATTAGAAGCCAATCTTATTGCTTTCTTGGTATTATTATTACCATCTACTTCTTCTTT 82
Query 61 TGTCTTCTTCCCTTACCAAACACCTTTGCTTCTCCTCCCACACAGTCTTTGTGCCGCCA- 119
||||||||||||||||||||||||||||| | | ||||||||| |||||||||||| ||
Sbjct 83 TGTCTTCTTCCCTTACCAAACACCTTTGC-T-T-CTCCCACACGGTCTTTGTGCCG-CAG 138
Query 120 CGACCAAAGAGATGCTCTTTTGGAGCTACAAAAAGAGTTCCCGATCCCTTCCGTTATTTT 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 139 GGACCAAAGAGATGCTCTTTTGGAGATACAAAAAGAGTTCCCGATCCCTTCCGTTACTTT 198
Query 180 ACAAAATCCGTGGAACAAGGGCATTGACTGTTGTTCTTGGGGCGGAGTCACGTGTGATGC 239
| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 199 AGGAAATCCGTGGAACAAGAGCATTGACTGTTGTTCTTGGGGTGGAGTCACGTGTGATGC 258
Query 240 TATCTTGGGAGAGGTGATATCACTAAAACTCTATTTCCTTAGTACTGCTAGCACCTCTTT 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 TATCTTGGGAGAGGTGATATCACTAAAACTCTATTTCCTTAGTACTGCTAGCACCTCTTT 318
Query 300 GAAATCTAGTAGTGCTCTTTTTAAACTGCAACATCTTACTCACTTAGACCTTTCGA-ATT 358
|||||||||||||| ||||||||||||| |||||||||||||| |||||||||| | |||
Sbjct 319 GAAATCTAGTAGTGGTCTTTTTAAACTGAAACATCTTACTCACCTAGACCTTTC-AGATT 377
Query 359 GCAATCTCCAAGGGGAGATTCCTTCTTCTATTGAAAATCTTTCCCACCTCACACATCTTG 418
|||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||
Sbjct 378 GCAATCTCCAAGGGGAGATTCCTTCTTCAATTGAAAATCTTTCCCATCTCGCACATCTTG 437
Query 419 ATCTTTCTACTAATCACTTAGTAGGTGAAGTTCCTGCTTCAATCGGTAACCTAAACCAAC 478
||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 438 ATCTTTCTAGTAATCACTTAGTAGGTGAAATTCCCGCTTCAATCGGTAACCTAAACCAAC 497
Query 479 TAGAATACATAGATCTTAGGGGTAATCATCTCAGAGGTAATATTCCTACTTCATTTGCCA 538
|||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |
Sbjct 498 TAGAATACATAGATCTTAGGGGAAATCAACTCATAGGTAATATTCCTACTTCATTTGCAA 557
Query 539 ACTTAACCAAGCTTTCTCTATTGGACCTCCATGAAAAT-AATTTCACGGGTGGTGATATA 597
||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct 558 ACTTAACCAAGCTTTCTCTATTGGACCTCCACAAAAATCAA-TTCACGGGTGGGGATATA 616
Query 598 GTATTATCCAACTTAACCAGCTTAGCGATTCTAGACCTCTCCTCCAATCACTTCAAATCC 657
|||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 617 GTATTAGCCAACTTAACCAGCTTAGCCATTATAGACCTCTCCTCCAATCACTTCAAATCC 676
Query 658 TTCTTTTCCGCTGACCTAAGTGGACTCCACAACCTGGAGCAAATTTTTGGGAATGAAAAC 717
|||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||
Sbjct 677 TTCTTTTCCGCTGATTTAAGTGGACTCCACAACCTGGAGCAAATCTTTGGGGGTGAAAAC 736
Query 718 TCATTTGTCGGACTTTTTCCCGCCTCCTTGCTCAAGATTTCTTCGTTAGACAAGATTCAG 777
||||||||||||| ||||||| | |||||||||| ||||||||| |||| | | ||| ||
Sbjct 737 TCATTTGTCGGACCTTTTCCCTCATCCTTGCTCATGATTTCTTCTTTAGTCCATATT-AG 795
Query 778 -TTAAGCCAAAACCAATTTGAGGGACCGATTGATTTTGGAAATACGTCTTCATCATCTAG 836
||| | ||||||||| |||||||| ||||||||||| ||||| ||||||||||||||
Sbjct 796 TTTAGGGGGAAACCAATTCGAGGGACCTATTGATTTTGGGAATACATCTTCATCATCTAG 855
Query 837 -GCT-TA---CAA-T-G----T-T---A-G-AT-A-TC--AGCCACAACAATTTTATAGG 875
|| || || | | | | | | | | || ||||| ||||||||| |||
Sbjct 856 ATCTATATGGAAATTAGTCAATCTCGAACGTTTAAGTCTTAGCCAAAACAATTTTGGAGG 915
Query 876 ACGAGTCCCGAGTTCTCTATCTAAATTAGTCAATCTCGAACT-TTTAGACCTTAGCCACA 934
||||||||| || ||| ||||||| ||||||||||| ||| | |||||| ||||||||||
Sbjct 916 ACGAGTCCCTAGATCTATATCTAAGTTAGTCAATCTTGAA-TATTTAGATCTTAGCCACA 974
Query 935 ACAATTTCAG-AGGACTATCCCCTAGATCTATATCTAAGTTAGTCAACCTCACCTCCCTT 993
|||||||| | || ||||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct 975 ACAATTTC-GAAGAACTATTCCCTAGATCTATATCTAAGTTAGCCAACCTCACTTCCCTT 1033
Query 994 GATATTTCCTACAACAAGTTGGAAGGTCAAGTACCTTATTTCATATGGAAACCTTCTAAC 1053
|||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||
Sbjct 1034 GATATTTCCTACAACAAGTTGGAAGGTCAAGTACCTCATTTAATATGGAGACCTTCTAAG 1093
Query 1054 TTGCAATCTGTGGATCTTTCTCATAATTCGTTCTTCGACTTGGGCAAATCTGTGGAAGTT 1113
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1094 TTGCAATCTGTGGATCTTTCTCATAATTCGTTCAACAACTTGGGCAAATCTGTGGAAGTT 1153
Query 1114 GTCAATGGAGCAAAGTTAGTTGGGTTGAATCTTGGTTCAAATTCACTCCAAGGACCGATT 1173
|||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 1154 GTCAATGGGGCAAAGTTAGGTGGGTTGAATCTTGGTTCAAATTCACTCCAAGGACCAATT 1213
Query 1174 CCCCAATGGATCTGCAACTTCAGATTTGTTTTCTTCTTAGATTTGTCAGACAACCGTTTC 1233
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1214 CCCCAATGGATCTGCAACTTCAGATTTGTTTTCTTCTTAGATTTGTCCGACAACCGTTTC 1273
Query 1234 ACTGGCTCAATTCCTCAATGTTTGAAGAATTCTACTGATTTTAATACGTTAAATCTGCGA 1293
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1274 ACTGGCTCAATTCCACAATGTTTGAAGAATTCCACTGATTTTAATACGTTAAATCTGCGA 1333
Query 1294 AACAACAGTCTAAGTGGGTTTCTGCCAGAATTATGCATGGATAGCACTATGTTACGATCA 1353
||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct 1334 AACAACAGTCTAAGTGGATTTCTGCCAGAGTTGTGCATGGATAGCACTATGTTACGATCA 1393
Query 1354 CTTGATGTCAGCTACAACAATTTTGTGGGGAAGCTTCCAAAATCTTTGATGAACTGCCAA 1413
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1394 CTTGATGTCAGCTACAACAATTTGGTGGGGAAGCTTCCAAAATCTTTGATGAATTGCCAG 1453
Query 1414 GATATGGAATTTTTGAATGTGAGAGGAAACAAGATCAAAGACACGTTTCCATTTTGGTTG 1473
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1454 GATATGGAATTTCTGAATGTGAGAGGAAACAAGATCAAGGACACGTTTCCATTTTGGTTG 1513
Query 1474 GGCTCTCGGAAATCATTAATGGTTCTTGTGCTCCGATCAAATGCATTCTATGGTCCAGTC 1533
||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1514 GGCTCTCGGGAATCCCTAATGGTTCTTGTGCTACGATCAAATGCATTCTATGGTCCAGTC 1573
Query 1534 TATAACTCCACTACCTATTTGGGGTTTCCACGCTTGAGTATCATTGATATATCTAATAAC 1593
||||||||| || |||||||||||||||||||| ||||||||||||| ||||| |||||
Sbjct 1574 TATAACTCCTCTGCCTATTTGGGGTTTCCACGCCTGAGTATCATTGACATATCCAATAAT 1633
Query 1594 GATTTCGTTGGGTCATTACCACAAGACTATTTTGCCAATTGGACTGAAATGGCAACGGTG 1653
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1634 GATTTCGTTGGATCATTACCACAAGACTATTTTGCCAATTGGACTGAAATGTCAACGGTG 1693
Query 1654 TGGGACATCAATCGACTGAACTACGCAAGAAACACTTCTTCAAGAACAATACAATATGGG 1713
||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1694 TGGGATATCAATCGACTGAACTACGCAAGAAACACTTCCTCAAGAACGATACAATATGGG 1753
Query 1714 GGACTTCAAACTATCCAAAGGTCGAACTACGTGGGGGATAATTTCAATATGCATGCAGAT 1773
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1754 GGACTTCAAACTATCCAAAGGTCGAACTACGTGGGGGATAATTTCAATTTGCATGCAGAT 1813
Query 1774 TCGATGGATTTGGCGTACAAAGGAGTAGACACAGATTTTAATCGGATCTTTCGAGGCTTT 1833
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1814 TCGATTGATTTGGCGTACAAAGGAGTAGACACAGATTTTAATCGGATCTTTCGAGGCTTC 1873
Query 1834 AAAGTCATAGATTTTTCTGGAAACCGATTCTCTGGACATATCCCTAGA-TCCATTGGTCT 1892
|||||||| |||||||| |||||||||||||| |||||||||||| || |||||||||||
Sbjct 1874 AAAGTCATTGATTTTTCGGGAAACCGATTCTCCGGACATATCCCT-GAATCCATTGGTCT 1932
Query 1893 ATTGAGCGAATTGCTTCATCTCAACTTGTCAGGCAATGCATTCACAGGCAACATCCCTCC 1952
||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||
Sbjct 1933 TTTGAGCGAATTGCGTCTTCTCAACTTGTCCGGCAATGCATTCACAGGCAACATCCCTCC 1992
Query 1953 ATCCTTGGCAAATATCACAAACCTCGAGACGTTAGACCTATCGCGAAATAACTTGTCAGG 2012
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 1993 ATCCTTGGCAAATATCACAACCCTCGAGACATTAGACCTATCGCGAAATAACTTGTCAGG 2052
Query 2013 TGAAATTCCTCGAAGTCTCGGGAACCTCTCGTTTCTGTCCAACATCAACTTCTCCCACAA 2072
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2053 TGAAATTCCTCAAAGTCTCGGGAAACTCTCGTTTCTGTCCAACATCAACTTCTCCCACAA 2112
Query 2073 TCATCTACAAGGATTCGTGCCACGGAGCACACAGTTTGGAACTCAAAATTGTTCTTCATT 2132
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2113 TCATCTACAAGGATTTGTGCCACGGAGCACACAGTTTGGAAGTCAAAATTGTTCTTCATT 2172
Query 2133 CGTGGGTAATCCTGGACTTTATGGCCTCGATGAAATTTGTAGAGAAAGCCATCATGTTCC 2192
|| ||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||
Sbjct 2173 CGCGGGTAATCCTGGACTCTATGGCCTCGACGAAATTTGTGGAGAAAGCCATCATGTTCC 2232
Query 2193 TGTTCCTACATCTCAGCAACATGATGGGTCTTCTTCAGAACTAGAAGAGCCAGTGCTGAA 2252
|||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||
Sbjct 2233 TGTTCCTACATCTCAGCAACATGATGAGTCTTCGTCAGAACCAGAAGAGCCAGTGCTGAA 2292
Query 2253 CTGGATAGCAGCCGCGATAGCCTTTGGACCTGGTGTGTTCTGTGGATTTGTGATCGGACA 2312
|||||||||||| || ||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 2293 CTGGATAGCAGCTGCAATAGCGTTTGGACCTGGTGTGTTTTGTGGATTAGTGATCGGACA 2352
Query 2313 CATCTTCACTTCATACAAACACTTGTGGTTTATAGCTCGTTAA 2355
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2353 CATCTTCACTTCATACAAACACTTGTGGTTTATAGCTCGTTAA 2395
> Ahg479821 jgi|Araly1|479821|fgenesh2_kg.3__2522__AT3G23110.1
Length=1680
Score = 601 bits (325), Expect = 9e-171
Identities = 519/612 (85%), Gaps = 15/612 (2%)
Strand=Plus/Plus
Query 1740 CTACGTGGGGGATAATTTCAATATGCATGC-AGATTCGATGGATTTGGCGTACAAAGGAG 1798
|||| |||||||| || ||| | |||| | ||||||||| ||||||| || |||||||
Sbjct 1029 CTACATGGGGGATGGTTCCAACAAGCAT-CAAGATTCGATTGATTTGGTATATAAAGGAG 1087
Query 1799 TAGACACAGATTTTAAT-CGGATCTTTCGAGGCTTTAAAGTCATAGATTTTTCTGGAAAC 1857
|||||||||| ||| | | ||||||| || ||| |||| ||| |||||||||||||||
Sbjct 1088 TAGACACAGA-TTTCGTACTAATCTTTCAAGCCTTCAAAGCCATTGATTTTTCTGGAAAC 1146
Query 1858 CGATTCTCTGGACATATCCCTAG-ATCCATTGGTCTATTGAGCGAATTGCTTCATCTCAA 1916
|||||||| ||| | || ||| | |||||||||||||||||||||||||| || ||||||
Sbjct 1147 CGATTCTCCGGATACATTCCT-GAATCCATTGGTCTATTGAGCGAATTGCGTCTTCTCAA 1205
Query 1917 CTTGTCAGGCAATGCATTCACAGGCAACATCCCTCCATCCTTGGCAAATATCACAAACCT 1976
||| |||||||| ||||||| ||||| ||||| || || ||||||||||| ||||| ||
Sbjct 1206 CTTATCAGGCAACACATTCACTGGCAATATCCCACCGTCATTGGCAAATATTACAAAGCT 1265
Query 1977 CGAGACGTTAGACCTATCGCGAAATAACTTGTCAGGTGAAATTCCTCGAAGTCTCGGGAA 2036
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 1266 CGAGACGTTAGACCTATCGCGAAACAACTTGTCAGGTGAAATTCCTCGAGGTCTCGGGAA 1325
Query 2037 CCTCTCGTTTCTGTCCAACATCAACTTCTCCCACAATCATCTACAAGGATTCGTGCCACG 2096
||||||||||| |||||||||||||||||||| || |||||| | ||||| |||||||
Sbjct 1326 ACTCTCGTTTCTCTCCAACATCAACTTCTCCCATAACCATCTAGAGGGATTGGTGCCACA 1385
Query 2097 GAGCACACAGTTTGGAACTCAAAATTGTTCTTCATTCGTGGGTAATCCTGGACTTTATGG 2156
||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||
Sbjct 1386 GAGCACACAGTTTGGAAGTCAAAATTGTTCTTCATTCGTGGGTAATCCCAGACTCTATGG 1445
Query 2157 CCTCGATG-AAATTTGTAGAGAAAGCCATCATGTTCCTGTTCCTACATCTCAGCAAC--A 2213
||||| | |||||||| |||||| |||| || || || |||||||| | ||| | |
Sbjct 1446 GCTCGA-GCAAATTTGTGGAGAAATCCAT---GTCCCCGTACCTACATCGCTGCAGCCCA 1501
Query 2214 TGATGGGTCTTCTTCAGAACTAGAAGAGCCAGTGCTGAACTGGATAGCAGCCGCGATAGC 2273
| | | | || || |||| ||||||||||||||||| ||||||||||| || |||||
Sbjct 1502 AGGTAGCT-TTGTTG-GAACCGGAAGAGCCAGTGCTGAATTGGATAGCAGCTGCAATAGC 1559
Query 2274 CTTTGGACCTGGTGTGTTCTGTGGATTTGTGATCGGACACATCTTCACTTCATACAAACA 2333
||||||||||||||||| |||||||| ||||||||||| || |||||||||||||| ||
Sbjct 1560 ATTTGGACCTGGTGTGTTTTGTGGATTAGTGATCGGACATATTTTCACTTCATACAAGCA 1619
Query 2334 CTTGTGGTTTAT 2345
| |||| ||||
Sbjct 1620 CAAGTGGCTTAT 1631
Score = 525 bits (284), Expect = 5e-148
Identities = 561/689 (81%), Gaps = 42/689 (6%)
Strand=Plus/Plus
Query 856 AGCCACAACAATTTTA-TAGGACGAGTCCCGAGTTCTCTATCTAAATTA-GTCAATCTC- 912
||||||||||| |||| ||| | |||||| || | | |||| |||||| | |||||||
Sbjct 217 AGCCACAACAA-TTTAGGAGGGCAAGTCCCTAGCTATATATCAAAATTACG-CAATCTCT 274
Query 913 GAACTTTTAGACCTTAGCCACAACAATTTCAGAGGACTA-TCCCCTAGATCTATATCTAA 971
| | |||||| |||||| | ||||||||| |||||| | | |||||| |||||||| ||
Sbjct 275 TATC-TTTAGATCTTAGCTATAACAATTTCGGAGGACGAGT-CCCTAGCTCTATATCAAA 332
Query 972 GTTAGTCAACCTCACCTCCCTTGATATTTCCTACAACAAGTTGGAAGGTCAAGTACCT-T 1030
||||||||||||| |||||| || |||| ||||||||||||| ||| |||||||||
Sbjct 333 ATTAGTCAACCTCAGTTCCCTTAATCTTTCGTACAACAAGTTGGTAGGCCAAGTACCTCA 392
Query 1031 ATTTCATATGGAAACCTTCTAACTTGCAA-TCTGTGGATCTTTCTCATAATTCGTTCTTC 1089
|| | ||||||| | ||||||| ||| || || || ||||| ||| ||||||| ||| |
Sbjct 393 ATGT-ATATGGAGATCTTCTAAGTTG-AATTCGGTTGATCTCTCTTATAATTCTTTCAGC 450
Query 1090 GA-CTTGGGCA-AATCTGTGGAAGTTGTCAATGGAGCAAAGTTAG-TTG-G-GTTGAATC 1144
| || |||| ||| | | ||| ||| ||| | || |||| | | | | |||
Sbjct 451 -AGTTTCGGCATAAT-TCTAGAA-CCCACAAAGGA-CCAA-TTAGAAAGAGACTGGGATC 505
Query 1145 TTGGTTCAAATTCACTCCAAGGACCGATTCCCCAATGGATCTGCAACTTCAGAT-TTGTT 1203
|| |||||||||||||||||||||| |||||||||||||||||||| |||| || || ||
Sbjct 506 TTAGTTCAAATTCACTCCAAGGACCAATTCCCCAATGGATCTGCAATTTCAAATATT-TT 564
Query 1204 TTCTTCTTAGATTTGT-CAGACAACCGTTTCACTGGCTCAATTCCTCAATGTTTGAAGAA 1262
| |||||||||||| | || |||||| | ||| |||||||||||| ||||||||||||||
Sbjct 565 TCCTTCTTAGATTTTTCCA-ACAACCATCTCAATGGCTCAATTCCACAATGTTTGAAGAA 623
Query 1263 TTCTACTGATTTTAATACGTTAAATCTGCGAAACAACAGTCTAAGTGGGTTTCTGCCAGA 1322
|||||||||||| || | ||||||||| |||||||||||||||||||| ||| |||||||
Sbjct 624 TTCTACTGATTTCAACATGTTAAATCTTCGAAACAACAGTCTAAGTGGATTTATGCCAGA 683
Query 1323 ATTATGCATGGATAG--CACTATGTTACGATCACTTGATGTCAG-CTACAACAATTTTGT 1379
|||||||| ||| | ||| | || ||||||||||| ||||| || ||||||||| ||
Sbjct 684 TTTATGCATCGATGGCTCAC-A-ATTGCGATCACTTGACGTCAGCCT-CAACAATTTGGT 740
Query 1380 GGGGAAG-CTTCCAAAATCTTTGATGAACTGCCAAGAT--ATGGAATTTTTGAATGTGAG 1436
|||| || ||||||||||||||||| ||||| | || | ||||| ||| | ||||||||
Sbjct 741 GGGG-AGACTTCCAAAATCTTTGATCAACTG-CGAG-TGGATGGAGTTTCTAAATGTGAG 797
Query 1437 AGGAAACAAGATCAAAGACACGTTTCCATTTTGGTTGGGCTCTCGGA-AAT-CATTAATG 1494
||||||||||||||||||||||||||| ||||||||||| |||| | ||| | | || |
Sbjct 798 AGGAAACAAGATCAAAGACACGTTTCCGTTTTGGTTGGGATCTCT-ACAATACCTAAA-G 855
Query 1495 GTTCTTGTGCTCCGATCAAATGCATTCTA 1523
||||||||||||||||||||| |||||||
Sbjct 856 GTTCTTGTGCTCCGATCAAATACATTCTA 884
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88712180605
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5