BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT3G23270.1

Length=3138
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg319046 jgi|Araly1|319046|fgenesh1_pm.C_scaffold_3002062          5042    0.0  
  Ahg493465 jgi|Araly1|493465|fgenesh2_kg.7__2898__AT4G14370.1         283    5e-75


> Ahg319046 jgi|Araly1|319046|fgenesh1_pm.C_scaffold_3002062
Length=3132

 Score = 5042 bits (2730),  Expect = 0.0
 Identities = 3006/3141 (96%), Gaps = 12/3141 (0%)
 Strand=Plus/Plus

Query  1     ATGGCAGATCCTGCTAGTTGTTATATCTATCACGAGCGTGACGTCGACCAAGCACTTGTC  60
             ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct  1     ATGGCAGATCCTGCTAGTTGTTATATCCATCACGAGCGTGACATCGACCAAGCACTTGTC  60

Query  61    GTATTGAAAAAGGGAACTCAATTACTCAAGTATAGTCGGAAAGGGAAACCTAAATTCCGC  120
             ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  61    GTACTGAAAAAGGGAACTCAATTACTCAAGTACAGTCGGAAAGGGAAACCTAAATTCCGC  120

Query  121   GCATTCAGGCTTTCTCCGGATGAAAAAACGTTGATTTGGTTCTCGCGTGGAGAAGAAAAA  180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  121   GCATTCAGGCTTTCTCCGGATGAAAAAACGTTGATTTGGTTCTCGCGTGGAGAAGAAAAA  180

Query  181   GGTTTGAAGTTATTTGAAGTTTCTCGTATTGTCCCGGGACAAAGAACTAGATTTCTACGT  240
             |||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||
Sbjct  181   GGTTTGAAGTTATTCGAAGTTTCTCGTATCGTCCCGGGACAAAGAACTAGATTTTTACGT  240

Query  241   CCAGAGAAAGATCACTTATCATTTTCACTTCTATATAACAACAGAGAAAGGTCACTTGAT  300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  241   CCAGAGAAAGATCACTTATCATTTTCACTTCTATATAACAACAGAGAAAGGTCACTTGAT  300

Query  301   CTGATTTGTAAGGACAAAGCTGAGACAGAGGTGTGGTTTGCTGCCCTTAAATTTTTGATT  360
             |||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||
Sbjct  301   CTGATTTGTAAGGACAAAGCAGAGACAGAGGTTTGGTTTGCTGGCCTTAAATTTTTGATT  360

Query  361   GAAAAAAGTCGTAATCGACGCGCCAGAAGTGAAATCCCTGAGATACATGATAGTGACACT  420
             || ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct  361   GAGAAAAGTCGTAATCGACGCGCCAGAAGTGAGATCCCTGAGATACATGACAGTGACACT  420

Query  421   TTCTCTGTTGGTCGTCAATCTATAGACTTTGTCCCAAGCAATATTCC-ACGAGGTAGAAC  479
             ||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||
Sbjct  421   TTCTCTGTTGGTCGTCAATCTATAGACTTTGTCCCAAACAATATTCCGA-GAGGTAGAAC  479

Query  480   ATCAATTGACTTAGGCTATCAGAACAATTCAGATGTGGGATATGAACGTGGAAACATGTT  539
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  480   ATCAATTGACTTAGGCTATCAGAACAATTCAGATGTGGGATATGAACGTGGAAACATGTT  539

Query  540   AAGACCAAGTACAGATGGTTTTCGGATCAGTGTCTCAAGCACACCAAGTTGTTCAAGTGG  599
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  540   AAGACCAAGTACGGATGGTTTTCGGATCAGTGTCTCAAGCACACCAAGTTGTTCAAGTGG  599

Query  600   AGGATCTGGTCCGGATGATATTGAATCATTAGGTGATGTTTACGTTTGGGGTGAAGTTTG  659
             |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  600   AGGATCTGGTCCAGATGATATTGAATCATTAGGTGATGTTTACGTTTAGGGTGAAGTTTG  659

Query  660   GACTGAAGGGATATTACCAGACGGAACTGCTAGCAATGAAACTGTGAAAACAGATGTACT  719
             ||||||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||
Sbjct  660   GACTGAAGGGATATTACCAGATGGAACTGTTAGCAAAGAAACAGTGAAAACAGATGTACT  719

Query  720   AACTCCAAGACCTTTGGAATCAAATGTTGTTCTCGATGTTCACCAGATTGTTTGCGGTGT  779
              ||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||
Sbjct  720   GACTCCAAGACCTTTGGAATCAAACGTTGTGCTTGATGTTCATCAGATTGTTTGCGGTGT  779

Query  780   AAGGCACGTTGCGCTTGTGACAAGACAAGGAGAGGTTTTTACTTGGGGAGAAGAAGTTGG  839
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  780   AAGGCACGTTGCGCTTGTGACAAGACAAGGAGAGGTTTTCACTTGGGGAGAAGAAGTTGG  839

Query  840   AGGAAGGCTTGGACATGGTATACAAGTAGATATTAGTCGTCCAAAACTCGTTGAGTTTCT  899
             ||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||||
Sbjct  840   AGGAAGGCTTGGACATGGTATTCAAGTCGATATTAGTCGTCCGAAACTAGTTGAGTTTCT  899

Query  900   TGCTCTAACCAACATAGACTTTGTTGCATGTGGAGAATATCATACTTGTGTTGTATCTAC  959
             |||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||
Sbjct  900   TGCTCTAACCAACATAGATTTTGTTGCTTGTGGAGAATATCATACTTGTGTTGTTTCTAC  959

Query  960   CTCTGGTGACTTGTTTTCATGGGGAGATGGAATCCATAATGTTGGGCTATTAGGACATGG  1019
             ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  960   CTCTGGTGACTTGTTTTCATGGGGAGATGGAATCCATAATGTTGGTCTATTAGGACATGG  1019

Query  1020  TAGTGATATAAGCCATTGGATACCTAAAAGAGTCTCTGGTCCTTTAGAAGGTCTTCAAGT  1079
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1020  TAGTGATATTAGCCATTGGATACCTAAAAGAGTCTCTGGTCCTTTAGAAGGTCTTCAAGT  1079

Query  1080  ACTCTCAGTTGCTTGTGGAACATGGCATTCAGCTTTAGCTACTGCGAACGGGAAGCTATT  1139
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct  1080  ACTCTCAGTTGCTTGTGGAACATGGCATTCGGCTTTAGCTACTGCGAACGGGAAGCTATT  1139

Query  1140  CACGTTTGGTGATGGAGCGTTTGGCGTTTTAGGTCATGGAAACAGAGAAAGTGTTTCATA  1199
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct  1140  CACGTTTGGTGATGGAGCGTTTGGCGTTTTGGGTCATGGAAACAGAGAAAGTGTTTCGTA  1199

Query  1200  TCCTAAGGAAGTACAATCATTAAACGGTTTGAAAACGGTGAAAGTAGCTTGTAGTATTTG  1259
             ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||
Sbjct  1200  TCCTAAGGAAGTACAGTCGTTAAACGGTTTGAAAACTGTGAAAGTAGCTTGTAGTATCTG  1259

Query  1260  GCATACCGCAGCGATTGTCGAGGTTATGGGTCAAACCGCTACGAGTATGTCATCTAGGAA  1319
             ||||||||| ||||||||||||||||||||||| || | |||||||||||||||||||||
Sbjct  1260  GCATACCGCTGCGATTGTCGAGGTTATGGGTCAGACTGGTACGAGTATGTCATCTAGGAA  1319

Query  1320  GTTGTTTACTTGGGGTGATGGTGACAAAAACAGGTTGGGACACGGAAACAAAGAGACTTA  1379
             ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct  1320  GTTGTTTACTTGGGGTGATGGTGACAAAAACAGATTGGGACATGGAAACAAAGAGACTTA  1379

Query  1380  CTTGCTTCCAACTTGTGTATCTTCTCTTATTGACTACAACTTTCATAAGATTGCTTGTGG  1439
             |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct  1380  CTTGCTTCCAACTTGTGTCTCTTCTCTTATTGACTACAACTTTCATAAGATTGCTTGCGG  1439

Query  1440  GCATACATTTACCGTCGCACTCACAACTTCTGGACATGTTTTTACTATGGGTGGTACCGC  1499
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1440  ACATACATTTACCGTCGCACTCACAACTTCTGGACATGTTTTTACTATGGGTGGTACCGC  1499

Query  1500  TCATGGTCAGCTAGGTAACTCAATCTCTGATGGTAAATTACCATGCTTGGTTCAAGATAG  1559
              ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |
Sbjct  1500  GCATGGTCAGCTAGGTAACTCAATATCTGATGGTAAATTACCATGCTTGGTGCAAGATCG  1559

Query  1560  ATTAGTCGGAGAATTCGTGGAAGAAATCGCGTGCGGAGCTCACCATGTCGCGGTTTTGAC  1619
             ||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct  1560  ATTGGTTGGAGAATTCGTGGAAGAAATCGCGTGCGGAGATCACCATGTTGCGGTTTTGAC  1619

Query  1620  ATCTAGAAGTGAAGTCTTCACGTGGGGAAAAGGTGCTAATGGAAGATTAGGACATGGAGA  1679
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct  1620  ATCTAGAAGTGAAGTCTTCACATGGGGAAAAGGTGCTAATGGAAGATTAGGACATGGAGA  1679

Query  1680  TACAGAGGATAAAAGAACACCAACTT-TGGTTGAAGCCTTGAGAGATAGGCATGTGAAGA  1738
             |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct  1680  TACAGAGGATAAAAGAACACCAACTTGTG-TTGAAGCCTTGAGAGATAGGCATGTGAAGA  1738

Query  1739  GTTTATCTTGCGGCTCAAACTTTACGTCAAGTATATGTATACATAAGTGGGTATCCGGAG  1798
             | |||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||
Sbjct  1739  GCTTATCTTGCGGCTCAAACTTTACGTCGAGTATATGTATACATAAATGGGTATCTGGAG  1798

Query  1799  CAGATCAGTCAATCTGCTCCGGATGTCGTCAAGCATTCGGATTTACCCGGAAGAGGCATA  1858
             |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct  1799  CAGATCAGTCAATCTGCTCCGGATGTCGTCAAGCATTCGGATTTACTCGGAAGAGGCATA  1858

Query  1859  ACTGTTATAACTGTGGTTTAGTCCATTGTCATGCTTGTAGCTCAAAGAAAGCTTTAAAAG  1918
             | |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  1859  ATTGTTATAATTGTGGTTTAGTCCATTGTCATGCTTGTAGCTCAAAGAAAGCTCTAAAAG  1918

Query  1919  CAGCTTTAGCTCCAACTCCGGGGAAACCACATCGCGTATGTGATGCTTGTTACAGCAAAC  1978
             |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct  1919  CAGCATTAGCTCCAACTCCGGGGAAACCACATCGCGTATGCGATGCTTGTTACAGCAAAC  1978

Query  1979  TTAAAGCCGCGGAGTCTGGTTATAGTTCTAATGTAAACAGGAATGTTGCAACTCCAGGAC  2038
             ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1979  TTAAAGCGGCAGAGTCTGGTTATAGTTCTAATGTAAACAGGAATGTTGCAACTCCAGGAC  2038

Query  2039  GGTCAATAGATGGATCAGTAAGAACTGATAGAGAAACAACAAGGTCATCGAAAGTTCTCT  2098
             ||||||||||||| |||||||||| ||| | |||||||||||||||||| ||||||||||
Sbjct  2039  GGTCAATAGATGGGTCAGTAAGAAGTGACAAAGAAACAACAAGGTCATCAAAAGTTCTCT  2098

Query  2099  TGTCCGCAAATAAAAATTCAGTCATGTCATCATCAAGGCCTGGATTCACACCTGAGTCTT  2158
             |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||
Sbjct  2099  TGTCCGCAAATACAAATTCAGTCAGGTCATCATCAAGGCCTGGACTCACACCTGATTCTT  2158

Query  2159  CTAATGCTCGTGCCTCGCAAGTTCCATCTCTCCAACAACTTAAAGACATTGCATTCCCAA  2218
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  2159  CTAATGCTCGTGCCTCGCAAGTTCCATCTCTCCAACAACTTAAAGACATTGCATTCCCGA  2218

Query  2219  GTTCGCTTAGCGCCATTCAAAATGCTTTCAAACCTGTTGTTGCTCCAACTACTACTCCAC  2278
             |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct  2219  GTTCGCTTAGCGCCATTCAAAATGCTTTCAAACCTGTTATTGCTCCTACTACTACTCCAC  2278

Query  2279  CACGTACACTTGTTATTGGACCATCATCTCCATCACCGCCTCCACCTCCAAGATCATCCT  2338
             | ||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct  2279  CGCGTCCACTTGTTGTTGGACCATCATCCCCATCACCGCCTCCACCTCCAAGATCATCCT  2338

Query  2339  CTCCTTATGCAAGAAGACCGAGCCCTCCACGCACTTCTGGATTTTCAAGAAGTGTTATCG  2398
             ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct  2339  CTCCTTATGCAAGAAGAACGAGCCCTCCACGCACTTCTGGATTTTCAAGAAGCGTTATCG  2398

Query  2399  ATAGTTT-AAGGAAGACTAACGAAGTTATGAACCAAGAAATGACAAAACTGCATAGTCAG  2457
             ||||||| ||  |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct  2399  ATAGTTTGAAA-AAGACTAACGAAGTTATGAACCAAGAAATGACAAAACTACAGAGTCAG  2457

Query  2458  CAGAGATGTAATAATCAAGGTACAGAGATTGAAAGATTTCAAAAAGCAGCTAAAGACGCT  2517
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  2458  CAGAGATGTAATAATCAAGGTACAGAGATTGAGAGATTTCAAAAAGCAGCTAAAGACGCT  2517

Query  2518  TCTGAATTAGCTGCAAGACAATCTTCAAAACATAAAGCAGCAACAGAAGCACTCAAGTCT  2577
             | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  2518  TTTGAATTAGCTGCAAAACAATCTTCAAAACATAAAGCAGCAACAGAAGCACTCAAGTCT  2577

Query  2578  GTTGCAGAACAGTTAAAAGAATTGAAGGAGAAATTACCTCCAGAAGTATCAGAGAGTGAA  2637
             ||||||||||||||||||||| |||| || |||||||| |||||||||||||||||||||
Sbjct  2578  GTTGCAGAACAGTTAAAAGAACTGAAAGATAAATTACCACCAGAAGTATCAGAGAGTGAA  2637

Query  2638  GCATTTGAATCCATTAACTCTCAAGCTGAAGCTTATCTAAACGCAAACAAAGTATCAGAA  2697
             |||||||||||||| |||||||||||||||||||||||||| |||||| ||| || ||||
Sbjct  2638  GCATTTGAATCCATCAACTCTCAAGCTGAAGCTTATCTAAATGCAAACGAAGCATTAGAA  2697

Query  2698  ACATCTCCACTTACAACTTCGGGACAAGAACAAGAAACATATCAAAAGACAGAGGAACAA  2757
             ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  2698  ACATCTCTACTTACAACTTCAGGACAAGAACAAGAAACATATCAAAAGACAGAGGAACAA  2757

Query  2758  GTACCTTCTAACTCAAGTATAACCGAGACATCGAGTTCATCAAGGGCACCAAGTACAGAA  2817
             ||| ||||||||||||||||||||||| |||||| |||||||||  ||||||| ||||||
Sbjct  2758  GTATCTTCTAACTCAAGTATAACCGAGGCATCGAATTCATCAAGACCACCAAGCACAGAA  2817

Query  2818  GCTTCATCATCAAGAATAAGTGGAAAAGAAAGTAAAGAACAATTTGAGCCTGGTGTTTAT  2877
             |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct  2818  GCTTCATCATCAAGAACAAGTGGAAAAGAAAGTAAAGAACAGTTTGAGCCTGGTGTTTAT  2877

Query  2878  GTGACTTATGAGGTAGACATGAATGGTAACAAGATCTTTCGACGAGTTAGATTTAGTaaa  2937
             || |||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct  2878  GTTACTTATGAGGTAGACATGAATGGTAACAAGATCTTTCGACGAGTGAGGTTTAGTAAA  2937

Query  2938  aaaaGATTTGATGAGCATCAAGCAGAAGATTGGTGGACCAAAAACAAAGATAGGTTGCTT  2997
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2938  AAAAGATTTGATGAGCATCAAGCAGAAGATTGGTGGACCAAAAACAAAGATAGGTTGCTT  2997

Query  2998  AAGTGTTATAGTTCAAATtcatcatcatcatcatcatcatcGAATCCAACGGCTTCCGAC  3057
             ||||||||| ||||||||||||||||||| |  |||||   ||||||||||||||| |||
Sbjct  2998  AAGTGTTATGGTTCAAATTCATCATCATC-T--TCATC---GAATCCAACGGCTTCTGAC  3051

Query  3058  TCACCTGTTGCTCCACAACCACCGTCTGATCCGTCGGTACCTGAACAGAGCAATGAGAAG  3117
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct  3052  TCACCTGTTGCTCCACAACCACCGTCTGATCCGTCAGTACCTGAACAGAGCAACGAGAAG  3111

Query  3118  GAACCAGATTCTGAAACCTAG  3138
             |||||||||||||||||||||
Sbjct  3112  GAACCAGATTCTGAAACCTAG  3132


> Ahg493465 jgi|Araly1|493465|fgenesh2_kg.7__2898__AT4G14370.1
Length=5602

 Score =  283 bits (153),  Expect = 5e-75
 Identities = 383/487 (79%), Gaps = 43/487 (9%)
 Strand=Plus/Plus

Query  229   AGAT-TTCTACGTCCAGAGAAA-GATCACTTATCATTTTCACTTC-TATATAACAACAGA  285
             |||| || ||||||| || ||| ||| |||| |||||||| | || ||||| | ||| ||
Sbjct  2743  AGATATT-TACGTCCTGA-AAAGGATTACTTGTCATTTTCTC-TCATATATCATAACGGA  2799

Query  286   GAAAGGTCACTTGATCTGATTTGTAAGGACAAAGCTGAGACAGAGGTGTGGTTTGCTGCC  345
             || || || |||||||||||||| |||||||||||||| |||||| | |||||||| |  
Sbjct  2800  GATAGATCTCTTGATCTGATTTGCAAGGACAAAGCTGAAACAGAGATTTGGTTTGCAGGA  2859

Query  346   CTTAAATTTTTGATT-GAAAAAAGTCGTAATCGA-CGCGCCAGAAGTGAAATCCCTGAGA  403
             ||||| | ||| ||| || ||||  ||||| | | | ||||| |||||| ||||||||||
Sbjct  2860  CTTAAGTCTTTAATTAGACAAAA-CCGTAA-CAAGCACGCCAAAAGTGAGATCCCTGAGA  2917

Query  404   TACATGATAGTGACACTTTCT---CTGTTGGT-CGTC-A----ATCTATAGACTTT-GTC  453
             ||||||| ||||||  |||||   ||| | || | || |    ||||||||| ||| | |
Sbjct  2918  TACATGACAGTGACTGTTTCTCCACTGGTCGTCCTTCTACTGCATCTATAGA-TTTCG-C  2975

Query  454   -CCAAGCAATATTCCACGAGGTAGAACATCAATTGACTTAGG----C--TA-TC-AGAAC  504
              |||| ||||| || |||||| |||||||| ||||| |||||    |   | ||   |||
Sbjct  2976  ACCAAACAATACTCGACGAGGAAGAACATCCATTGATTTAGGAATCCAAAACTCTCCAAC  3035

Query  505   -AA------T---TCAGATGTGGGATATGAACGTGGAAACATGTTAAGACCAAGTACAGA  554
              ||      |   |||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct  3036  AAAGTTTGGTAGCTCAGATGTGGGATATGAACGTGGAAACATGCTAAGACCAAGTACTGA  3095

Query  555   TGGTTTTCGGATCAGTGTCTCAAGCACACCAAGTTGTTCAAGTGGAGGATCTGGTCCGGA  614
             ||||||||| || |||||||||||||||||||||||||||| ||||   |||||||| ||
Sbjct  3096  TGGTTTTCGAATTAGTGTCTCAAGCACACCAAGTTGTTCAACTGGAACTTCTGGTCCCGA  3155

Query  615   TGATATTGAATCATTAGGTGATGTTTACGTTTGGGGTGAAGTTTGGA-CTGAAGGGATAT  673
             ||| || ||||| ||||| |||||||| || ||||| |||||||| | | || |||||||
Sbjct  3156  TGACATAGAATCCTTAGGCGATGTTTATGTCTGGGGAGAAGTTTGTAGC-GACGGGATAT  3214

Query  674   TACCAGA  680
              || |||
Sbjct  3215  CACAAGA  3221



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 118536842440


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5