BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G23420.1 Length=858 Score E Sequences producing significant alignments: (Bits) Value Ahg930371 jgi|Araly1|930371|scaffold_302828.1 442 2e-123 Ahg342182 jgi|Araly1|342182|fgenesh1_pg.C_scaffold_3001945 411 6e-114 Ahg342623 jgi|Araly1|342623|fgenesh1_pg.C_scaffold_3002386 357 8e-98 Ahg930559 jgi|Araly1|930559|scaffold_303016.1 322 3e-87 Ahg479258 jgi|Araly1|479258|fgenesh2_kg.3__1959__AT3G19470.1 268 4e-71 Ahg479548 jgi|Araly1|479548|fgenesh2_kg.3__2249__AT3G20400.1 211 6e-54 Ahg930556 jgi|Araly1|930556|scaffold_303013.1 209 2e-53 Ahg333377 jgi|Araly1|333377|fgenesh1_pm.C_scaffold_672000001 180 2e-44 Ahg314206 jgi|Araly1|314206|fgenesh1_pm.C_scaffold_1002986 156 3e-37 Ahg904694 jgi|Araly1|904694|Al_scaffold_0003_1822 143 2e-33 Ahg312135 jgi|Araly1|312135|fgenesh1_pm.C_scaffold_1000915 58.4 9e-08 Ahg340580 jgi|Araly1|340580|fgenesh1_pg.C_scaffold_3000343 52.8 4e-06 > Ahg930371 jgi|Araly1|930371|scaffold_302828.1 Length=984 Score = 442 bits (239), Expect = 2e-123 Identities = 303/333 (91%), Gaps = 7/333 (2%) Strand=Plus/Plus Query 93 GAGCTTTGCAAAGAAGCACCTTGTTTGTCAAGCAAAAGTAGCTGCAAAGAAAAGAGAGTA 152 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 94 GAGCTTTGCAAAGAAGCACCTTGGTCGTCAAGCAAAAGTAGCTGCAAAGAAAAGAGAGTT 153 Query 153 TAAGGTGGTCATGATGATGGATTTTAGGGTTTATTTGATGCGCATAAATCTTCAGAACAA 212 || ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 154 TACGGTGGTCATGATGATGGGTTTTAGGGTTTATTTGATGCGCATAAATCTTCACAACAA 213 Query 213 CGTTGAATTGTGT-AT-AAAGCGTGAACGTGAACTTCTTTTCCCCGACGCTTCAGATCAA 270 ||||||||| | | || ||| |||||| || ||||| ||||||||||||||||| ||||| Sbjct 214 CGTTGAATTAT-TCATGAAA-CGTGAAGGTAAACTTATTTTCCCCGACGCTTCATATCAA 271 Query 271 ATTTACGTCCGTCACGTCTTTCACTGCGACGGTTTATTGTTATGCATCATGAAAGACAAC 330 || || || || || ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 272 ATCTATGTACGGCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATCCTGAAAGACAAC 331 Query 331 CCTAGGCTTGTGGTTTGTAACCCGTATAGTGGACAAACCCGGTGGATCGAGAC-TACAAA 389 ||||||||||||||||| ||||||||| |||| |||||||||||||||||||| | |||| Sbjct 332 CCTAGGCTTGTGGTTTGGAACCCGTATTGTGGGCAAACCCGGTGGATCGAGACAT-CAAA 390 Query 390 TAATCCTCAGAGATTAGATGCATATTCGTATGC 422 |||| |||| ||||||||||| |||||| |||| Sbjct 391 TAATTCTCACAGATTAGATGCGTATTCG-ATGC 422 Score = 392 bits (212), Expect = 2e-108 Identities = 262/285 (92%), Gaps = 7/285 (2%) Strand=Plus/Plus Query 545 GAGACATTTGGGCCGCGGTTTGCCTTCGCCGCCCTTTGAGTGGTATCTTCAAGAGTTCTC 604 ||||||||| |||||| ||||||| | | ||| |||||| ||||||| |||| | ||| Sbjct 527 GAGACATTTAGGCCGC-GTTTGCC-T--CTGCCGGTTGAGTCGTATCTTGAAGA-TACTC 581 Query 605 TGTTATTATCTAATGTTAGAGATGAGCAGCTTGCGGTGTTATTTCAGCGTATGGATACAT 664 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 582 TGTTATTATCTAGTGTTAGAGATGAGCAGCTTGCGGTGTTATTTCAGCATATGGATACAT 641 Query 665 TACAGATGGAGATCTGGGTTACAACTAAGATTGAGCCCAACACGGTGTCATGGAGCAGCA 724 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 642 TACAGATGGAGATCTGGGTGACAACTAAGATTGAGCCCAACACGGTGTCGTGGAGCAGCA 701 Query 725 AGTTCTTCTTATCAGTGGATATGAGAGAACTCACCGGCCGTTACTCTATGTTTTCGTTTA 784 |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 702 AGTTCTTCTTATCAGTTGATATGAGAGAACTCACCGGCATTTACTCTATGTTTTCGTTTA 761 Query 785 GTGA-TGCAAGTTTCTTCATTGATGAGGAGAAGAAAGTTGCAGTG 828 || |||||||||||||| ||||||||||||||||||||||||| Sbjct 762 -TGGCTGCAAGTTTCTTCACTGATGAGGAGAAGAAAGTTGCAGTG 805 > Ahg342182 jgi|Araly1|342182|fgenesh1_pg.C_scaffold_3001945 Length=981 Score = 411 bits (222), Expect = 6e-114 Identities = 393/471 (83%), Gaps = 29/471 (6%) Strand=Plus/Plus Query 90 TAGGAGCTTTGCAAAGAAGCACCTTGTTTGTCAAGCAAAAGTAGCT---GCAAA-GAAAA 145 |||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| Sbjct 24 TAGGAGCTTTGCAAAGAAGCACCTTG---CTCAAGCAAGAGTAGCTGCAGCAAAGGAAAA 80 Query 146 GAGAGTATAAGGTGGTCATGATGATGGATTTTAGGGTTTATTTGATGCGCATAAATCTTC 205 | |||| || ||||||||||||||||||||||||||||||| |||||| | | ||||||| Sbjct 81 G-GAGTTTATGGTGGTCATGATGATGGATTTTAGGGTTTATCTGATGCACGTGAATCTTC 139 Query 206 A-GA--ACAACGTTGAATTGTGTAT-AAAGCGTGAACGTGA-ACTTCTTTTCCCCGACGC 260 | | |||| |||||||| || || ||| ||| || || | |||| ||||||||||||| Sbjct 140 ACTACGACAAGGTTGAATTATGCATGAAA-CGTCAAGGT-ACACTTATTTTCCCCGACGC 197 Query 261 TTCAGATCAAATTTACGTCCGTCACGTCTTTCACTGCGACGGTTTATTGTTATGCATCAT 320 ||||||||||| || || ||||| ||||||||||||||||||||||||||||||||| | Sbjct 198 CTCAGATCAAATCTATGTACGTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATCCT 257 Query 321 GAAAGACAACCCTAGGCTTGTGGTTTGTAACCCGTATAGTGGACAAACC-CGGTGGATCG 379 |||||||||||||||||| || |||| |||||||||| |||| ||| || |||||||||| Sbjct 258 GAAAGACAACCCTAGGCTCGTTGTTTTTAACCCGTATTGTGGGCAA-CCACGGTGGATCG 316 Query 380 A-GACTACAAATAATCCTCAGAGATTAGA-TGCATATTCGTATGCTCTCGGATACAATAG 437 | | | ||| ||||| ||||||||| || | ||||||| | |||| ||||||||||| Sbjct 317 AAGCC-ACATATAATAATCAGAGATTGGAATTT-TATTCGTTTTCTCTGGGATACAATAG 374 Query 438 CAGTACCAAATCCCACAAAATCTTGAG-TTT-TGGTATGATGTTTGA-TTATGTCTCCTC 494 || ||||||||||||||||||||||| ||| | ||| || | | || | |||| | Sbjct 375 CAACACCAAATCCCACAAAATCTTGAGATTTATTTTAT-ATCATGGTCTT-T-TCTCTTT 431 Query 495 CACTTCTG-CTGAGTTCAAAATCTACGACTTTAACTCTGACTCATGGAGGG 544 ||| || ||||||||||||||||||||||||||||||| |||||||||| Sbjct 432 GGCTT-TGGCTGAGTTCAAAATCTACGACTTTAACTCTGATTCATGGAGGG 481 Score = 294 bits (159), Expect = 6e-79 Identities = 250/292 (86%), Gaps = 14/292 (5%) Strand=Plus/Plus Query 548 ACATTTGGGCCGCGGTTTGCCTTCGCCGCCCTTTGAGTGGTATCTTCAAGAGT-TCTCTG 606 ||||||||||||| ||||||| | | |||||||||||||| || | ||| | | |||| Sbjct 574 ACATTTGGGCCGC-GTTTGCC-T--CTGCCCTTTGAGTGGTGTCCTGTAGA-TAT-TCTG 627 Query 607 TTA-T-TATCTAATGTTAGAGATGAGCAGCTTGCGGTGTTATTTCAGCGTA-TGGATACA 663 | | |||||| |||||||||||| |||||||| ||||||||||| || | ||||||| Sbjct 628 --AGTCTATCTATTGTTAGAGATGAACAGCTTGCTGTGTTATTTCAACG-AGAGGATACA 684 Query 664 TTACAGATGGAGATCTGGGTTACAACTAAGATTGAGCCCAACACGGTGTCATGGAGCAGC 723 || || ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||| Sbjct 685 TTTCAAATGGAGATCTGGGTTACAACTAAGATTGAGCCCAACACGTTGTCGTGGGGCAGC 744 Query 724 AAGTTCTTCTTATCAGTGGATATGAGAGAACTCACCGGCCGTTACTCTATGTTTTCGTTT 783 |||||||||||||||||||||||||||| ||||||||| | | ||||||||||||| Sbjct 745 AAGTTCTTCTTATCAGTGGATATGAGAGTTCTCACCGGCAATGGGTTTATGTTTTCGTTT 804 Query 784 AGTGATGCAAGTTTCTTCATTGATGAGGAGAAGAAAGTTGCAGTGCTT-ACA 834 |||| ||||||||||||||||||||||||||||||| | || ||| || ||| Sbjct 805 AGTGGTGCAAGTTTCTTCATTGATGAGGAGAAGAAAATCGCTGTGTTTTACA 856 > Ahg342623 jgi|Araly1|342623|fgenesh1_pg.C_scaffold_3002386 Length=1329 Score = 357 bits (193), Expect = 8e-98 Identities = 360/439 (82%), Gaps = 18/439 (4%) Strand=Plus/Plus Query 2 TGGCGGAGGAGGTGCTTTCTAGGGTTCCGATGACATCTCTAAG-AAGACTCCGATTTACT 60 ||| |||||||||||| |||||||||||| | |||||| |||| || | ||||||| ||| Sbjct 32 TGGTGGAGGAGGTGCTCTCTAGGGTTCCGTTAACATCTTTAAGAAATA-TCCGATTAACT 90 Query 61 TGCAAAAAGTGGAACACTTTATCTAGATGTAG-GAGCTTTGCAAAGAAGCACCTTGTTTG 119 |||||||||||||||| |||||| | | || | ||||||||||||||||||||||| || Sbjct 91 TGCAAAAAGTGGAACATTTTATCCAAAGGT-GAGAGCTTTGCAAAGAAGCACCTTG-GTG 148 Query 120 -TCAAGCAAAAGTAGCTGCAAAGAAAAGAGAGTATAAGGTGGTCATGATGATGGATTTTA 178 ||||||||||| ||| |||| | ||||||||| || | ||||||||||||||||||||| Sbjct 149 ATCAAGCAAAAGAAGCAGCAACGGAAAGAGAGTTTATGATGGTCATGATGATGGATTTTA 208 Query 179 GGGTTTATTTGATGCGCA-TAAATCTTCAGAACAACGTTGAATTGTGTATAAAGCGTGAA 237 |||||||||||||||| | | |||||||| || ||||||| | |||||||||| |||| Sbjct 209 GGGTTTATTTGATGCG-AGTCAATCTTCACAATGACGTTGAGTCATGTATAAAGCCTGAA 267 Query 238 CGTGAACTTCTTTTCCCCGACGCTTCAGATCAAATTTACGTCCGTCACGTCTTTCACTGC 297 |||||||| ||| | |||| ||| | | | || || ||| |||||||||||| Sbjct 268 GGTGAACTTATTTGCTTAGACGAAGAAGA-CGA-TGTA--TC--TCAAGTCTTTCACTGC 321 Query 298 GACGGTTTATTGTTATGCATCATGAAAGACAACCCTAGGCTTGTGGTTTGTAACCCGTAT 357 |||||||||||||||||||| ||| |||| ||| ||||| |||||||||| ||||||||| Sbjct 322 GACGGTTTATTGTTATGCATTATGGAAGATAACACTAGGATTGTGGTTTGGAACCCGTAT 381 Query 358 AGTGGACAAACCCGGTGGATCGAGACTACAAATAAT--CCTCAGAGATTAGATGCATATT 415 | || || ||| ||||||||| | ||||| ||||| || || | ||| || | ||| Sbjct 382 TGGGGGCATACCTGGTGGATCGTGCCTACACATAATTTCCACA-A-ATTGGACGTTTATA 439 Query 416 CGTATGCTCTCGGATACAA 434 |||||||||| |||||||| Sbjct 440 CGTATGCTCTTGGATACAA 458 > Ahg930559 jgi|Araly1|930559|scaffold_303016.1 Length=1149 Score = 322 bits (174), Expect = 3e-87 Identities = 435/556 (78%), Gaps = 38/556 (7%) Strand=Plus/Plus Query 3 GGCGGAGGAGGTGCTTTCTAGGGTTCCGATGACATCTCTAAGAAGACTCCGATTTACTTG 62 ||| ||||||||||| | ||| ||||| |||||||||| |||| | |||||| |||||| Sbjct 55 GGC-GAGGAGGTGCTCTGTAGAATTCCGTTGACATCTCTGAGAAAAGTCCGATCTACTTG 113 Query 63 CAAAAAGTGGAACACTTTA-TCTAGATGTAG-GAGCTTTGCAAAGAAGCACCTTGTTTG- 119 ||||||||||||||||||| || | | || | ||||||||| |||||| |||||| || Sbjct 114 CAAAAAGTGGAACACTTTATTC-AAAGGT-GAGAGCTTTGCGAAGAAGTACCTTG-GTGA 170 Query 120 TCAAGCAAAAGTAGCTGCAA-AGAAAAGAGAGTATAAGGTGGTCATGATGATGGATTTTA 178 ||||||||||||||| |||| ||||| ||||| || | ||||||||||||||||||||| Sbjct 171 TCAAGCAAAAGTAGCAGCAACGGAAAA-AGAGTTTATGATGGTCATGATGATGGATTTTA 229 Query 179 GGGTTTATTTGATGCGCATAAATCTTCAGAACAACGTTGAATTG-TGTATAAAGCGTGAA 237 ||||||||||||||||| | |||||||| || ||||| || | ||||||| ||||||| Sbjct 230 GGGTTTATTTGATGCGCGTCAATCTTCACAATGACGTT-AAGTCATGTATAATGCGTGAA 288 Query 238 CGTGAACTTCTTTTCCCCGACGCTTCAGATCAAATTTACGTCCGTCACGTCTTTCACTGC 297 |||||||| || | || | | || |||| | || || ||| |||||||||||| Sbjct 289 GGTGAACTTGTTAGCTTAGAAGATGAAG-TCAA-TGTA--TC--TCAAGTCTTTCACTGC 342 Query 298 GACGGTTTATTGTTATGCATCATGAAAGACAACCCTAGGCTTGTGGTTTGTAACCCGTAT 357 |||||||||||||||||||| ||| |||| || ||||| |||| ||||| ||||||||| Sbjct 343 GACGGTTTATTGTTATGCATTATGGAAGATAATACTAGGGTTGTTGTTTGGAACCCGTAT 402 Query 358 AGTGGACAAACCCGGTGGATCGAGACTACAA-ATAATCCTC-AGAGA-TTAGATGCATAT 414 | || |||||||||| ||||||| ||| | || || || | | | || || | ||| Sbjct 403 TGGGGGCAAACCCGGTTGATCGAGTCTA-AGCATGATT-TCCAAAAAATTT-ATTCGTAT 459 Query 415 -TCGTATGCTCTCGGATACAATA-GCAGTACCAAATCCCACAAAATCTTGAGT-T-TTGG 470 | |||||||||||||||| | | | || | ||| || | |||| | | ||| Sbjct 460 AT-GTATGCTCTCGGATACGAGAAG-AGCAGCAAGTCATGCCGCATCTACAAAATCTTG- 516 Query 471 TATGATGT-TTGATTATGTCTCCTCCACTTCTGCTGAGTTCAAAATCTACGACT-TTAAC 528 | ||| | |||||| | ||||| | |||| || |||||| ||||||||||| | ||||| Sbjct 517 -A-GATTTATTGATTTT-TCTCC-C-ACTTATGTTGAGTTTAAAATCTACGA-TATTAAC 570 Query 529 TCTGACTCATGGAGGG 544 ||| | |||||||||| Sbjct 571 TCTAATTCATGGAGGG 586 > Ahg479258 jgi|Araly1|479258|fgenesh2_kg.3__1959__AT3G19470.1 Length=1263 Score = 268 bits (145), Expect = 4e-71 Identities = 377/482 (78%), Gaps = 44/482 (9%) Strand=Plus/Plus Query 5 CGGAGGAGGTGCTTTCTAGGGTTCCGATGACATCTCTAAGAAGAC--TCCGATTTACTTG 62 ||||||||||||| | ||| ||||| |||||||||| || | | |||||| |||||| Sbjct 105 CGGAGGAGGTGCTCTGTAGAATTCCGTTGACATCTCT--GAGGCCTGTCCGATCTACTTG 162 Query 63 CAAAAAGTGGAACACTTTATCTAGATGTAGGAGCTTTGCAAAGAAGCACCTTGTTTGTCA 122 ||||||||||| ||||||||| | |||| |||||||||||||||||||||||| ||| Sbjct 163 CAAAAAGTGGAGCACTTTATCCAAATGTGGGAGCTTTGCAAAGAAGCACCTTG---CTCA 219 Query 123 AGCAAAAGTAGCTGCAAAGAAAAGAGAGTAT-AAGGTGGTCATGATGATGGATTTTAGGG 181 |||||||||||| | ||| |||| |||| | | |||||||||||||| | ||||||||| Sbjct 220 AGCAAAAGTAGCAG--AAGCAAAG-GAGT-TCATGGTGGTCATGATGAAGAATTTTAGGG 275 Query 182 TTTATTTGATGCGCA-TAAATCTTCAGAACAAC-GTTGAAT--T-GTGTATAAAGCGTGA 236 ||||||||||| | | | |||||||| ||| || ||||||| | |||||||| || || Sbjct 276 TTTATTTGATGAG-AGTCAATCTTCAAAAC-ACGGTTGAATCATCATGTATAAAACGCGA 333 Query 237 ACG-TGAACTTCTTTTCCCCGACGCTTCAGATCAAATT--TACGTCCGTCACGTCTTTCA 293 | | | ||||| || | | || | ||| || || || | | ||| |||||||| Sbjct 334 A-GCTAAACTTATTGGCTTAGGCG-AT--GATGAACTTGATATAT-C-TCAAGTCTTTCA 387 Query 294 CTGCGACGGTTTATTGTTATGCAT---CAT---GAAAGACAACCCTAGGCTTGTGGTTTG 347 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||| Sbjct 388 CTGCGACGGTTTATTGTTATGCATCAGCATCACCAAAGACAAGACTAGGCTCGTGGTTTG 447 Query 348 TAACCCGTATAGTGGACAAACCCGGT-GGATCGAGACTACAAAT-AA-TCCTCAGAGATT 404 ||||| ||| | || || |||| || |||||| | ||| || || || || | | | Sbjct 448 GAACCCCTATTGGGGGCATACCC-GTCCAATCGAGCCCACACATCAATTCAACA-A-ACT 504 Query 405 AGAT-GCATATTCGTATGCTCTCGGATACAATA-GCAGTACCAAATCCCACAAAATCTTG 462 ||| || ||||||||||||||||||||| | | | || | ||||||||||||||||||| Sbjct 505 CGATAGC-TATTCGTATGCTCTCGGATACGACAAG-AGCAGCAAATCCCACAAAATCTTG 562 Query 463 AG 464 || Sbjct 563 AG 564 > Ahg479548 jgi|Araly1|479548|fgenesh2_kg.3__2249__AT3G20400.1 Length=318 Score = 211 bits (114), Expect = 6e-54 Identities = 138/150 (92%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 670 ATGGAGATCTGGGTTACAACTAAGATTGAGCCCAACACGGTGTCATGGAGCAGCAAGTTC 729 ||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| Sbjct 1 ATGGAGATCTGGGTTACAACTAAGATTGAGCCCAACACGTTGTCGTGGGGCAGCAAGTTC 60 Query 730 TTCTTATCAGTGGATATGAGAGAACTCACCGGCCGTTACTCTATGTTTTCGTTTAGTGAT 789 |||||||||||||||||||||| ||||||||| | | ||||||||||||||||| | Sbjct 61 TTCTTATCAGTGGATATGAGAGTTCTCACCGGCAATGGGTTTATGTTTTCGTTTAGTGGT 120 Query 790 GCAAGTTTCTTCATTGATGAGGAGAAGAAA 819 |||||||||||||||||||||||||||||| Sbjct 121 GCAAGTTTCTTCATTGATGAGGAGAAGAAA 150 > Ahg930556 jgi|Araly1|930556|scaffold_303013.1 Length=272 Score = 209 bits (113), Expect = 2e-53 Identities = 202/243 (83%), Gaps = 14/243 (6%) Strand=Plus/Plus Query 144 AAGAGAGTATAAGGTGGTCATGATGATGGATTTTAGGGTTTATTTGATGCGCATAAATCT 203 |||||||| || | |||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 8 AAGAGAGTTTATGATGGTCATGATGATGGATTTTAGGGTTTATTTGATGCGCGTCAATCT 67 Query 204 TCAGAACAACGTTGAATTGTGTATAAAGCGTGAA-CGTGAACTTCTTTTCCCCGACGCTT 262 ||| ||||||||||||| ||||||||||||||| | | ||||| || || |||| || Sbjct 68 TCACAACAACGTTGAATCATGTATAAAGCGTGAAGC-TAAACTTATTAGCCTAGACGATT 126 Query 263 CAGATCAAATTTACGTC-CGTC-ACGTCT-TTCACTGCGACGGTTTATTGTTATGCATCA 319 ||| | || | | || | || | || | |||||||||||||||||||||||||||||| Sbjct 127 CAGTTGAAGTAGATGTAAC-TCGA-GT-TGTTCACTGCGACGGTTTATTGTTATGCATCA 183 Query 320 -TGAAAGACAACCCTAGGCTT-GTGGTTTGTAACCCGTATA-GTGGACAAACCCGGTGGA 376 | |||||| || ||| | || |||||||||||||||||| | || ||||||||||||| Sbjct 184 CT-AAAGACTACACTAAG-TTCGTGGTTTGTAACCCGTATTTGGGG-CAAACCCGGTGGA 240 Query 377 TCG 379 ||| Sbjct 241 TCG 243 > Ahg333377 jgi|Araly1|333377|fgenesh1_pm.C_scaffold_672000001 Length=1047 Score = 180 bits (97), Expect = 2e-44 Identities = 214/266 (80%), Gaps = 25/266 (9%) Strand=Plus/Plus Query 290 TTCACTGCGACGGTTTATTGTTATGCATCA-TGAAAGACAACCCTAGGCTT-GTGGTTTG 347 |||||||||||||||||||||||||||||| | |||||| || ||| | || |||||||| Sbjct 251 TTCACTGCGACGGTTTATTGTTATGCATCACT-AAAGACTACACTAAG-TTCGTGGTTTG 308 Query 348 TAACCCGTATA-GTGGACAAACCCGGTGGATCGAGACTACAAATAA-TCCTCAG-AGATT 404 |||||||||| | || |||||||||||||||| | | || |||| | ||| ||||| Sbjct 309 TAACCCGTATTTGGGG-CAAACCCGGTGGATCGTGTCCCCACATAAAT--TCAACAGATT 365 Query 405 AGA-T-GCATATTCGTATGCTCTCGGATACAATA-GCAGTACCAAATCCCACAAAATCTT 461 || | | ||| || |||||||||||||| | | | |||| ||||||| |||||||||| Sbjct 366 TGACTTGTATA--CGAATGCTCTCGGATACGACAAG-AGTAGCAAATCCTACAAAATCTT 422 Query 462 GAGT-TTTGGTATGATGT-TTGATTATGTCTCCTCC-ACTTCTGCTGAGTTCAAAATCTA 518 || | |||| | |||| | || |||| | ||| | |||| || ||||| ||||||||| Sbjct 423 GA-TATTTG-T-TGATTTCTT--TTATCCC-CCTGCTACTTTTGTTGAGTACAAAATCTA 476 Query 519 CGACTTTAACTCTGACTCATGGAGGG 544 |||||||||||||| |||||||||| Sbjct 477 TGACTTTAACTCTGATTCATGGAGGG 502 > Ahg314206 jgi|Araly1|314206|fgenesh1_pm.C_scaffold_1002986 Length=957 Score = 156 bits (84), Expect = 3e-37 Identities = 128/149 (86%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 103 AAGAAGCACCTTGTTTG-TCAAGCAAAAGTAGCTGCAAAGAAAAGAGAGTATAAGGTGGT 161 ||| || |||||| || |||||||||||||| |||||||||||||| | | |||||| Sbjct 37 AAGGAGTACCTTG-ATGATCAAGCAAAAGTAGAAGCAAAGAAAAGAGAATTTCTGGTGGT 95 Query 162 CATGATGATGGATTTTAGGGTTTATTTGATGCGCATAAATCTTCAGAACAACGTTGAATT 221 |||||||||||||||||||||||||||||||||| | |||||||| || ||||||| | Sbjct 96 CATGATGATGGATTTTAGGGTTTATTTGATGCGCGTCAATCTTCACAATGACGTTGAGTC 155 Query 222 GTGTATAAAGCGTGAACGTGAACTTCTTT 250 ||||||||||||||| |||||||| ||| Sbjct 156 ATGTATAAAGCGTGAAGGTGAACTT-TTT 183 > Ahg904694 jgi|Araly1|904694|Al_scaffold_0003_1822 Length=1077 Score = 143 bits (77), Expect = 2e-33 Identities = 298/398 (75%), Gaps = 41/398 (10%) Strand=Plus/Plus Query 2 TGGCGGAGGAGGTGCTTTCTAGGGTTCCGA-TGACATCTCTAAGAAG-ACTCCGATTTAC 59 |||| ||||||||||| ||||||||||| | | |||||||| || || | | |||||||| Sbjct 32 TGGCAGAGGAGGTGCTCTCTAGGGTTCC-AGTTACATCTCTGAG-AGCAGTACGATTTAC 89 Query 60 TTGCAAAAAGTGGAACACTTTATCTAGATGTAGGAGCTTTGCAAAGAAGCACCTTGTTTG 119 |||||||||||||||||||||| ||| | | |||||||| ||||||||| | ||||| Sbjct 90 TTGCAAAAAGTGGAACACTTTAACTAAACATCGGAGCTTTACAAAGAAGC---TGGTTTG 146 Query 120 TCAAGCAAAAGTAGCTGCAAAGAA-AAG-AGA-GTATAAGGT----G-G-TCATGATGAT 170 ||||||||||| || ||||||| ||| || | | || | | | |||||| ||| Sbjct 147 TCAAGCAAAAGCAGAACCAAAGAAGAAGCAGGCGAAGGAGTTTCATGCGATCATGACGAT 206 Query 171 GGATTTTAGGGTTTATTTGATG--CG-CA-TA-A-ATC---TTCA----GA--ACAACGT 215 | ||| || ||||||| ||||| || || | | || |||| || ||||||| Sbjct 207 GAATTATAAGGTTTATCTGATGAGCGTCAATCTAGATGAAATTCACAAAGATGACAACGT 266 Query 216 TGAATTGTGTATAAAGCGTGAACG-TGAACTTCTTTTCCCCGACGCTT-CAGATCAAATT 273 ||||| | |||||||| ||| | | ||||| || || ||| || | |||| ||| Sbjct 267 TGAATCATCTATAAAGCA-GAAAGGTAAACTTATTAGCCTAAACG-TTGCTGATCGAATA 324 Query 274 --TACGTCCGTCACGTCTT-TCACTGCGACGGTTTATTGTTATGCATCATGAAAGACAAC 330 || || ||| || || |||||| || ||||| ||||||||||||| || |||||| Sbjct 325 AGTATATC--TCAAGT-TTGTCACTGTGATGGTTTGTTGTTATGCATCACCAATGACAAC 381 Query 331 CCTAGGCTTGTGGTTTGTAACCCGTATAGTGGACAAAC 368 |||||||||||||||| ||||| ||| ||| ||||| Sbjct 382 TCTAGGCTTGTGGTTTGGAACCCTTATTCTGGGCAAAC 419 > Ahg312135 jgi|Araly1|312135|fgenesh1_pm.C_scaffold_1000915 Length=1782 Score = 58.4 bits (31), Expect = 9e-08 Identities = 37/40 (93%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 287 TCTTTCACTGCGACGGTTTATTGTTATGCATCATGAAAGA 326 ||||||||||||||||||||||||||||| | || ||||| Sbjct 986 TCTTTCACTGCGACGGTTTATTGTTATGCGTAATCAAAGA 1025 > Ahg340580 jgi|Araly1|340580|fgenesh1_pg.C_scaffold_3000343 Length=870 Score = 52.8 bits (28), Expect = 4e-06 Identities = 28/28 (100%), Gaps = 0/28 (0%) Strand=Plus/Plus Query 794 GTTTCTTCATTGATGAGGAGAAGAAAGT 821 |||||||||||||||||||||||||||| Sbjct 721 GTTTCTTCATTGATGAGGAGAAGAAAGT 748 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31756389861 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5