BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G23680.1
Length=708
Score E
Sequences producing significant alignments: (Bits) Value
Ahg930411 jgi|Araly1|930411|scaffold_302868.1 863 0.0
Ahg930412 jgi|Araly1|930412|scaffold_302869.1 394 5e-109
Ahg905435 jgi|Araly1|905435|Al_scaffold_0003_2563 342 2e-93
Ahg477685 jgi|Araly1|477685|fgenesh2_kg.3__386__AT3G04250.1 294 5e-79
Ahg887737 jgi|Araly1|887737|Al_scaffold_0685_1 261 5e-69
Ahg314297 jgi|Araly1|314297|fgenesh1_pm.C_scaffold_1003077 206 2e-52
Ahg340580 jgi|Araly1|340580|fgenesh1_pg.C_scaffold_3000343 185 3e-46
Ahg479757 jgi|Araly1|479757|fgenesh2_kg.3__2458__AT3G22421.1 178 5e-44
Ahg317222 jgi|Araly1|317222|fgenesh1_pm.C_scaffold_3000238 150 1e-35
Ahg908078 jgi|Araly1|908078|Al_scaffold_0002_1159 135 3e-31
Ahg905324 jgi|Araly1|905324|Al_scaffold_0003_2452 134 1e-30
Ahg925743 jgi|Araly1|925743|scaffold_201304.1 115 4e-25
Ahg345624 jgi|Araly1|345624|fgenesh1_pg.C_scaffold_4001966 115 4e-25
Ahg925736 jgi|Araly1|925736|scaffold_201297.1 100 1e-20
Ahg923074 jgi|Araly1|923074|scaffold_104355.1 75.0 7e-13
Ahg342698 jgi|Araly1|342698|fgenesh1_pg.C_scaffold_3002461 73.1 3e-12
Ahg937320 jgi|Araly1|937320|scaffold_501511.1 71.3 9e-12
Ahg929886 jgi|Araly1|929886|scaffold_302343.1 63.9 2e-09
Ahg479258 jgi|Araly1|479258|fgenesh2_kg.3__1959__AT3G19470.1 60.2 2e-08
Ahg929147 jgi|Araly1|929147|scaffold_301604.1 54.7 9e-07
Ahg485308 jgi|Araly1|485308|fgenesh2_kg.5__1300__AT3G49510.1 52.8 3e-06
> Ahg930411 jgi|Araly1|930411|scaffold_302868.1
Length=1141
Score = 863 bits (467), Expect = 0.0
Identities = 558/601 (93%), Gaps = 9/601 (1%)
Strand=Plus/Plus
Query 114 CACGTACTGGTGTGCTGCAAAAAGGAACGTAGATGTAAATGAAGTCTTTGCTAATCGCTT 173
||| |||| |||||||| ||||||||||||||||||| |||||||| || ||| ||||
Sbjct 524 CACTTACTTTTGTGCTGCTGAAAGGAACGTAGATGTAAAAGAAGTCTTGGCCAATAGCTT 583
Query 174 AATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTGG 233
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 584 AATCTGTTTCGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTTAGTGG 643
Query 234 TGGGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTAC 292
|||| || | ||||| || ||| || ||||||||||||||||||||||||||| ||||||
Sbjct 644 TGGGTATCA-TGACTATACGACATTGTCTTGTGTTAGAGAAGAGAAGCTTGCGCTTTTAC 702
Query 293 TTCAGCACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTGAGA 352
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 703 TTCAGCACGATGAATCAAATCCATATGAGCTTGACTTATGGATTACGACTAAGATTGAGA 762
Query 353 CTGGAGAGGTGTTGTGGAGCAAGTTCTTGAGAGTGGAAACAGCTGGATTTGATAGTTATG 412
||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 763 CTGAAGAGGTGTTGTGGAGCAAGTTCGTGAGAGTGGCAACAGCTGGATTTGATAGTTATG 822
Query 413 TTCCTA-TTATAAATGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTT 471
|||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 TTCC-ATTTATAGGTGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTT 881
Query 472 GAAGAT-GGG--AATCGCCACACAATTAACATCATTGGAGAGGCTGGATACTTGAGGGCA 528
|| ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 882 GATGATGGGGATAATCGCCACACAATTAACATCATTGGAGAGGCTGGATACTTCAGGGCA 941
Query 529 TTGGATCTCGTTGGAGATTATGGAGACCAAAG-ATGTAAGACAGATCTGTGCTCTTATGT 587
||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||||||
Sbjct 942 TTGGATCTCGTTGGAGATTTTGGAGACC-AAGAATGTCAGACAGATCTGTGCTCTTATGT 1000
Query 588 TCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAAAGGGAAGAAGAAAGCGAATT 647
||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 1001 TCCAAGTTTAGTGGAAATCAAGCAACCTGAAGGAGGAGAAAGGGAACAAGAAAGCGAATT 1060
Query 648 GGAGAAGCTTCGATATGATGAAAACATGTCGAGACTTGTCTTACTTGAAACGAATCCATG 707
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1061 GGAGAAGCTTCGATATGATGAAAACATGTCGAGACTTGTCTTACTTGAAGGGAATCAATG 1120
Query 708 A 708
|
Sbjct 1121 A 1121
> Ahg930412 jgi|Araly1|930412|scaffold_302869.1
Length=665
Score = 394 bits (213), Expect = 5e-109
Identities = 408/496 (82%), Gaps = 38/496 (8%)
Strand=Plus/Plus
Query 126 TGCTGC-AAAAAGGAACGTAGATGTA-AATGAAGTCTT-TGCTAATCGCTTAATCTGTTT 182
|||||| |||| ||||| | || || || |||||||| || | || ||||||||||
Sbjct 135 TGCTGCTGAAAA-GAACGCAAATTTAGAA-GAAGTCTTCACCT-CTAGCATAATCTGTTT 191
Query 183 TGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAG---TGGTGGGCA 239
|||||||||||||||||||||||||| ||||||| |||| ||||||| || ||||||
Sbjct 192 CGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCATCTGTCGTTTAGTACTGATGGGCA 251
Query 240 T-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTACTTCAGC 298
| | ||||| ||| || || |||||||||||||||||||| ||||||||||||||||| |
Sbjct 252 TCA-TGACTATATTACCTTGTCTTGTGTTAGAGAAGAGAAACTTGCGGTTTTACTTCA-C 309
Query 299 -ACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTGAGACTGGA 357
|| | ||||||||||||| ||| | || || || | |||||||| || |
Sbjct 310 TACAACAAATCAAATCCATACAAGC-T---TT-TC--TTTTG-----GATTGAGATTGAA 357
Query 358 GAGGTGTTGTGGAGCAA-GTTCTTGAGAGTGGAAACAGCTGGATTTGATAGTTATGTTCC 416
||||||| |||||| || |||||||||||||| || ||||||||| || |||||||||
Sbjct 358 GAGGTGTCGTGGAG-AAGGTTCTTGAGAGTGG---CAACTGGATTTGGTATTTATGTTCC 413
Query 417 TA-TTATAAATGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTTGA-A 474
| |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct 414 -ATTTATAAATGGAATTTTCTTCATTGACGAGGAGAAGAAAATCGTCATTGGTTTTGATA 472
Query 475 GATGGGAATCGCCACACAATTAACATCATTGGAGAGGCTGGATAC-TTGAGGGCATTGGA 533
| | |||||||||| | ||| |||||||||||||| |||| || |||| ||| ||
Sbjct 473 -ACGATAATCGCCACAGAGTTATTGTCATTGGAGAGGCTAAATACATT-AGGGGATTCGA 530
Query 534 TCTCGTTGGAGATTATGGAGACCAAAG-ATGTAAGACAGATCTGTGCTCTTATGTTCCAA 592
||||||| |||||| |||||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct 531 TCTCGTTAGAGATTTTGGAGACC-AAGAATGTAAGACAGATTTGTGCTCTTATGTTCCAA 589
Query 593 GTTTAGTGCAAATCAA 608
||||||||||||||||
Sbjct 590 GTTTAGTGCAAATCAA 605
> Ahg905435 jgi|Araly1|905435|Al_scaffold_0003_2563
Length=993
Score = 342 bits (185), Expect = 2e-93
Identities = 228/249 (92%), Gaps = 2/249 (1%)
Strand=Plus/Plus
Query 114 CACGTACTGGTGTGCTGCAAAAAGGAACGTAGATGTAAATGAAGTCTTTGCTAATCGCTT 173
||| |||| |||||||| ||||||||||||||||| |||||||||| || ||| ||||
Sbjct 498 CACTTACTTTTGTGCTGCTGAAAGGAACGTAGATGTAGATGAAGTCTTGGCCAATAGCTT 557
Query 174 AATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTGG 233
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 558 AATCTGTTTCGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTTAGTGG 617
Query 234 TGGGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTAC 292
||||||| | ||| | |||||| || ||||||||||||||||||||||||||||||||||
Sbjct 618 TGGGCATCA-TGATTATATGACTTTGTCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTAC 676
Query 293 TTCAGCACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTGAGA 352
||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||
Sbjct 677 TTCAGCACGATGAATCAAATCCATATGAGCTTGACTTGTGGATTACGACTAAGATTGAGA 736
Query 353 CTGGAGAGG 361
||| |||||
Sbjct 737 CTGAAGAGG 745
Score = 318 bits (172), Expect = 3e-86
Identities = 222/246 (90%), Gaps = 4/246 (2%)
Strand=Plus/Plus
Query 441 TGACGAGGAGAAGAAAGTCGCCATTGGTTTTGAAGATGGGAATCGCCACACAATTAACAT 500
||| |||||||||||||||||| |||||||||| || | |||||||||| | ||| |
Sbjct 738 TGAAGAGGAGAAGAAAGTCGCCTTTGGTTTTGATGACCGTAATCGCCACAGAGTTATTGT 797
Query 501 CATTGGAGAGGCTGGATACTTGAGGGCATTGGATCTCGTTGGAGATTATGGAGACCAAAG 560
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 798 CATTGGGGAGGCTGGATACTTGAGGGCATTGGATCTCGTTGGAGATTTTGGAGACCAAAG 857
Query 561 ATGTAAGACAGATCTGTGC-TCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAG 619
||||| | ||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 858 ATGTACGCCAGATCTGT-CGTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAG 916
Query 620 GAGGGGAAAGGGAAGAAGAAAGCGAATTGGAGAAG-CTTCGATATGATGAAAACATGTCG 678
|| |||||||| || |||||||||| ||||| ||| || |||||||||||||||||||||
Sbjct 917 GACGGGAAAGGAAACAAGAAAGCGATTTGGAAAAGTCT-CGATATGATGAAAACATGTCG 975
Query 679 AGACTT 684
||||||
Sbjct 976 AGACTT 981
> Ahg477685 jgi|Araly1|477685|fgenesh2_kg.3__386__AT3G04250.1
Length=852
Score = 294 bits (159), Expect = 5e-79
Identities = 419/539 (78%), Gaps = 40/539 (7%)
Strand=Plus/Plus
Query 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTG 232
|||||||||||||||| |||||||||||| |||| || ||||||| ||| |||||| | |
Sbjct 236 TAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGGCCGCTTCTGCGTCTACCGTTTTGCG 295
Query 233 GTGGGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTA 291
||||| | | ||||| | |||| ||||||||||||||||||||||||||||||| ||||
Sbjct 296 CTGGGCTTCA-TGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGCTTTA 354
Query 292 CTTCAGC-ACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTGA 350
||| | | || | |||||||||||||||||| |||| ||| ||||||||| ||||||||
Sbjct 355 CTT-ACCCACAACGAATCAAATCCATATGAGTTTGAGATATGGATTACGACTAAGATTGA 413
Query 351 G-ACTGGAGAGGTGTTGTGGAGCAAG-TTCTTG-AGAGTGGAAACAGCTGGATT---TGA 404
| | || | | |||| ||||||||| || ||| | | |||| |||| ||| |||
Sbjct 414 GTA-TGAAAAAGTGTCATGGAGCAAGATT-TTGGAAA-TGGATACAGGACCATTGGCTGA 470
Query 405 TAGTTATG-TTCCTATTATA-A-ATG-GAAGTTTCTTCATTGACGAGGAGAAGAAAGTCG 460
|| | || | ||| || | ||| || ||||||| |||||||||||||||| |||
Sbjct 471 CAGGCC-GATTGC-ATT-TACACATGAGA-GTTTCTTTGTTGACGAGGAGAAGAATGTCT 526
Query 461 CCATTGGTTTTGAAGA-TGGGAATCGCCACACAATTAACATCATTGGAGAGGCTGGATAC 519
|||| |||||||| || | | |||||||||||| ||||||||||||||||||| ||||||
Sbjct 527 CCATGGGTTTTGATGACTTG-AATCGCCACACAGTTAACATCATTGGAGAGGCCGGATAC 585
Query 520 TTGAGGGCATTGGATCTCGTTGGAGAT-TATGGAGACC-AAAGATGTAAG--AC-A-G-- 571
|| | | ||||||||||| | | | || | ||| ||| ||| | || | |
Sbjct 586 TTTATAGAATTGGATCTCGGAGTACCTGTA-GCCGACATAAAC-TGTGGGGCACGAAGGC 643
Query 572 -A--TCTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAAA 628
| | ||||| ||||||||||||||| |||||||||||| |||||| ||||| |||
Sbjct 644 CACATTTGTGCCCTTATGTTCCAAGTTCAGTGCAAATCAAACAACCTCCCGGAGGCAAAA 703
Query 629 GGGAA-GAAGAAAGCGAAT-TGGAGAAGCTTCGATATGATGAAAACATGTCGAGACTTG 685
|| || ||| ||| | | | | || |||| || ||||||| ||||||||| ||||||||
Sbjct 704 GGAAACGAA-AAACC-ATTCTAGAAAAGCGTCAATATGATCAAAACATGTTGAGACTTG 760
> Ahg887737 jgi|Araly1|887737|Al_scaffold_0685_1
Length=858
Score = 261 bits (141), Expect = 5e-69
Identities = 413/539 (77%), Gaps = 40/539 (7%)
Strand=Plus/Plus
Query 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTG 232
|||||||||||||||| |||||||||||| |||| || ||||||| ||| |||||| | |
Sbjct 242 TAATCTGTTTTGATTTCACAAGTGAGAGAGTTGGGCCGCTTCTGCGTCTACCGTTTTGCG 301
Query 233 GTGGGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTA 291
||||| | | ||||| | |||| ||||||||||||||||||||||||||||||| ||||
Sbjct 302 CTGGGCTTCA-TGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGCTTTA 360
Query 292 CTTCAGC-ACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTGA 350
||| | | || | ||||| ||||||||||| |||| ||| ||||||||| ||||||||
Sbjct 361 CTT-ACCCACAACGAATCCCATCCATATGAGTTTGAGATATGGATTACGACTAAGATTGA 419
Query 351 G-ACTGGAGAGGTGTTGTGGAGCAAG-TTCTTG-AGAGTGGAAACAGCTGGATT---TGA 404
| | || | | |||| ||||||||| || ||| | | |||| |||| ||| |||
Sbjct 420 GTA-TGAAAAAGTGTCATGGAGCAAGATT-TTGGAAA-TGGATACAGGACCATTGGCTGA 476
Query 405 TAGTTATG-TTCCTATTATA-A-ATG-GAAGTTTCTTCATTGACGAGGAGAAGAAAGTCG 460
|| | || | ||| || | ||| || ||||||| |||||||||||||||| |||
Sbjct 477 CAGGCC-GATTGC-ATT-TACACATGAGA-GTTTCTTTGTTGACGAGGAGAAGAATGTCT 532
Query 461 CCATTGGTTTTGAAGA-TGGGAATCGCCACACAATTAACATCATTGGAGAGGCTGGATAC 519
|||| |||||||| || | | |||||||||||| |||||||||||||||| ||||||
Sbjct 533 CCATGGGTTTTGATGACTTG-AATCGCCACACAGCCCACATCATTGGAGAGGCCGGATAC 591
Query 520 TTGAGGGCATTGGATCTCGTTGGAGAT-TATGGAGACC-AAAGATGTAAG--AC-A-G-- 571
|| | | ||||||||||| | | | || | ||| ||| ||| | || | |
Sbjct 592 TTTATAGAATTGGATCTCGGAGTACCTGTA-GCCGACATAAAC-TGTGGGGCACGAAGGC 649
Query 572 -A--TCTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAAA 628
| | ||||| ||||||||||||| | |||||||||||| |||||| ||||| |||
Sbjct 650 CACATTTGTGCCCTTATGTTCCAAGATCAGTGCAAATCAAACAACCTCCCGGAGGCAAAA 709
Query 629 GGGAA-GAAGAAAGCGAAT-TGGAGAAGCTTCGATATGATGAAAACATGTCGAGACTTG 685
|| || ||| ||| | | | | || |||| || ||||||| ||||||||| ||||||||
Sbjct 710 GGAAACGAA-AAACC-ATTCTAGAAAAGCGTCAATATGATCAAAACATGTTGAGACTTG 766
> Ahg314297 jgi|Araly1|314297|fgenesh1_pm.C_scaffold_1003077
Length=1167
Score = 206 bits (111), Expect = 2e-52
Identities = 287/366 (78%), Gaps = 36/366 (10%)
Strand=Plus/Plus
Query 178 TGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTGGT-GG 236
||||||||||||||||| ||||||||||| || ||| ||||| |||| ||||| | | ||
Sbjct 700 TGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTTTGCCATTTAGCGTTAGG 759
Query 237 GCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTACTTC 295
| || ||| | ||| ||| ||||||||||||||||||||||||||||| |||||| |||
Sbjct 760 G-ATCATTCA-TGTGTGATTTTATCTTGTGTTAGAGAAGAGAAGCTTGCAGTTTTATTTC 817
Query 296 AGCACGA--TGAATCA-AATCCATATGA-GCTTGACTTATCGATTACGACCAAGATTGAG 351
| ||| | || || | || |||||| | |||| ||| ||||||| ||| |||||
Sbjct 818 AACACCAAATGTATTATAA---ATATGAAG-TTGAAATATGGATTACGGTTAAGCTTGAG 873
Query 352 ACTGGAGA-GGTGTTGTGGAGCAAGTTCTTGAGAGTGGAAACAGCTGGATTTGATAGTTA 410
|| | | | ||||| ||||||||||||||||||| | ||| | | || | |
Sbjct 874 ACCGAA-ATGGTGTCGTGGAGCAAGTTCTTGAGAAT--AAATA-C-GG----G---G--- 918
Query 411 TGTTCCTATTATAAATGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTT 470
|| |||||| | ||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 919 ----CCAATTATACACACAAGTTTCTTCATTGACGAGGAAAAGAAAGTCGCCATTGGGTT 974
Query 471 TGAAGATGGGAATCGCCACACAATTAACATCATTGGAGAGGCTGGATACTTGAGGGCATT 530
| || || |||||| | |||||||||||||||||||||||||||||||| || | |||
Sbjct 975 T-AA--TGACAATCGCAA-ACAATTAACATCATTGGAGAGGCTGGATACTTTAGAGAATT 1030
Query 531 GGATCT 536
||||||
Sbjct 1031 GGATCT 1036
> Ahg340580 jgi|Araly1|340580|fgenesh1_pg.C_scaffold_3000343
Length=870
Score = 185 bits (100), Expect = 3e-46
Identities = 182/221 (82%), Gaps = 8/221 (4%)
Strand=Plus/Plus
Query 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTG 232
||||||||||||||| ||||| ||||||||||| || ||||| |||||||||||||| |
Sbjct 473 TAATCTGTTTTGATTATACAAAAGAGAGATTTGGACCGCTTCTACCTCTGCCGTTTAGCG 532
Query 233 GTGGGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTA 291
||| || | ||||| | |||| ||||||||||||||||||||||||||||||| ||||
Sbjct 533 CCGGGTATGA-TGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGCTTTA 591
Query 292 CTT-CAGCACGATGAA-TCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTG 349
||| | ||| | ||| | ||||| ||||||| ||||| ||| ||| ||||| |||||||
Sbjct 592 CTTAC-GCATAACGAAGT-AAATCTATATGAGTTTGACATATGGATCACGACTAAGATTG 649
Query 350 A-GACTGGAGAGGTGTTGTGGAGCAAGTTCTTGAGAGTGGA 389
| | | | | || | | ||||| ||||||||||| ||||||
Sbjct 650 ATGCC-GAAAAGATATCGTGGAACAAGTTCTTGACAGTGGA 689
> Ahg479757 jgi|Araly1|479757|fgenesh2_kg.3__2458__AT3G22421.1
Length=1236
Score = 178 bits (96), Expect = 5e-44
Identities = 400/537 (74%), Gaps = 59/537 (11%)
Strand=Plus/Plus
Query 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGT- 231
||||||||||||||||||||||||||||||| ||||| ||| || | ||||||||| |
Sbjct 701 TAATCTGTTTTGATTTTACAAGTGAGAGATTCGGTCCGCTTATGTATTTGCCGTTTATTA 760
Query 232 G-G-T-GG-G--CATATTGACTGTATGACGT-TATCTTGTGTTAGAGAAGAGAAGCTTGC 284
| | | || | || | | || | |||| | ||||||||||||||||||||||||||||
Sbjct 761 GAGATAGGTGTGCA-A--GCCT-TGTGAC-TCTATCTTGTGTTAGAGAAGAGAAGCTTGC 815
Query 285 GGTTTTACTTCAGC-ACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCA 343
||||||| || | || |||| | | | | |||| | | || ||||||||| |
Sbjct 816 GGTTTTATTTT-GTTACTATGA-T-AC-TG--T-TGAG---G--T-ATGGATTACGACTA 862
Query 344 AGATTGAGACTGGAGAGGTGTTGTGGAGCAAGTTCTTGAGAGTGGAAACAGCTGGAT-TT 402
|||||||| | | | || ||| ||||||||||||||||| |||| ||| | || || ||
Sbjct 863 AGATTGAGGCCGAAAAGATGTCGTGGAGCAAGTTCTTGACAGTG-AAA-A--TGTATGTT 918
Query 403 GATAGTTATG--TTC-CTATT-ATAAATGGAAGTTTCTTCATTGACGAGGAGAAGAAAGT 458
|| || || ||| | || | | ||| |||| |||||||||||| |||||||||
Sbjct 919 GACC-TTCTGGATTCAC-ATGCAGCAG-GGA-GTTTTTTCATTGACGAGCTGAAGAAAGT 974
Query 459 CGCCATTGGTTTT-GA-AGATGG--G-A--ATCGCCACACAATTAACATCATTGGAGAGG 511
|| || | |||| || ||| | | | ||||| ||||| || ||||| | |||||||
Sbjct 975 TGCTAT-GATTTTTGATAGACCGATGCATCATCGCGACACAGTTCACATCGTGGGAGAGG 1033
Query 512 CTGGATAC-TTGAGGGCATTGGATCTCGTTGGAGATTATGGA-GACCAAAGA-TGTAAGA 568
|||||||| || | | | ||||||| | | ||| || | ||| ||| | | |
Sbjct 1034 CTGGATACGTTAAAGA-AGTGGATCTAG--G-AGAACCTG-ATGAC-AAATACTTTTTCC 1087
Query 569 CAGATCTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAAA 628
|| | ||||||||||||||||||||||||| ||||||||| |||||| |||||| |||
Sbjct 1088 CACTTGTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAACCTGCAGGAGGCCAAA 1147
Query 629 GGGAAGAAGAAAGCGAATTG-GAGAAGCTTCGATATGATGAAAACATGTCGAGACTT 684
|| || || ||||| | || || || | ||||| |||| ||||||| |||||||||
Sbjct 1148 GGAAACAACAAAGC-AGTTTAGAAAAACGTCGATGTGATCAAAACATATCGAGACTT 1203
> Ahg317222 jgi|Araly1|317222|fgenesh1_pm.C_scaffold_3000238
Length=639
Score = 150 bits (81), Expect = 1e-35
Identities = 227/294 (77%), Gaps = 23/294 (8%)
Strand=Plus/Plus
Query 417 TATTATA-AATGGA-AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTTGAA 474
||||| | ||| || |||||| |||||||||||||||||||||||||| |||||||||
Sbjct 353 TATTA-ACAATTGAGAGTTTCATCATTGACGAGGAGAAGAAAGTCGCC-TTGGTTTTG-- 408
Query 475 GATGGGAATCGCCACACAATTAACA-TCATTGGAGAGGCTGGATACTTGAGGGCATTGGA 533
||| | | ||||||| || ||| || ||||||||||||||||||| || | || |||
Sbjct 409 GAT--G-A---CCACACATTTTACATTC-TTGGAGAGGCTGGATACTTAAGAGAATGGGA 461
Query 534 TCTCGTTGGAGATTATGGAGACCAAAGA-TGTAAGACAGATCTGTGCTCTTATGTTCCAA 592
|||| ||||| || | |||| | ||| ||| | ||||||||||||||||||
Sbjct 462 TCTC---GGAGAACCTGCCCA-CAAAAAGTGTTCCACACAAATGTGCTCTTATGTTCCAA 517
Query 593 GTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAAAGGGAAGAAGAAAGCGAATTG-GAG 651
|||||||||||||||||| ||| | |||| | ||| | || | ||||| | || ||
Sbjct 518 GTTTAGTGCAAATCAAGCGACCAGCAGGAAGCAAAAAGAAACTACAAAGC-AGTTTAGAA 576
Query 652 AAGCTTCGATATGATGAAAACATGTCGAGACTTGTCTTACTTGA-AA-CGAATC 703
|||| ||||||||| |||| | | |||||||||| |||||| || ||||||
Sbjct 577 AAGCGCCGATATGATCAAAAGAAATTGAGACTTGTCGCACTTGATAAGCGAATC 630
> Ahg908078 jgi|Araly1|908078|Al_scaffold_0002_1159
Length=1608
Score = 135 bits (73), Expect = 3e-31
Identities = 370/504 (73%), Gaps = 58/504 (12%)
Strand=Plus/Plus
Query 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTG 232
|||||||||||||||||||||| ||||||||||| || ||| |||||||||| |||||||
Sbjct 1127 TAATCTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTTTGCCTCTGCCATTTAGTG 1186
Query 233 -GTGGGCATATTGACTGTATGACGT---TATCTT-GTGTTAGAGAAGAGAAGCTTGCGGT 287
|||| | || || || ||| |||||| | ||||||||||||||| | || |
Sbjct 1187 CTTGGG-GTGCAGA--GTTTG-CGTCACTATCTTCG-GTTAGAGAAGAGAAGATCGCTGC 1241
Query 288 TTTACTTCAGCACGATGAATC-AAATCCATATGAGCTTGACTTATCGATTACGACCAAGA 346
|||| ||||| || || | ||| ||| | || |||| ||| |||||| || ||||
Sbjct 1242 TTTATTTCAG-AC----AAGCGAAA--CATTTAAGTTTGAGATATGGATTACAACTAAGA 1294
Query 347 TTGAGACTGGAGAGGTGTTGTGGAGCAAG-TTCTTGAGAGTGGAAACAGCTGGA-TTTGA 404
||||| ||| | | |||| ||||||| || ||||| | | |||| ||| | | ||||
Sbjct 1295 TTGAGGCTGAAAATGTGTCGTGGAGC-AGATTCTTCACAATGGATACATC-ATACCTTGA 1352
Query 405 TAGTTATGTTCCT-ATTATAAATGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCA 463
|| || | | || | ||| || | ||||||||||||||||||||||||||||| ||
Sbjct 1353 CAG-TAAGCT-CTCA-TAT-AA--G-AGTTTCTTCATTGACGAGGAGAAGAAAGTTGCTG 1405
Query 464 TTGGTTTT-GAAGATG--GGAA------T---CG-CCACAC--A--A---T-TAAC-ATC 501
| |||||| ||| | | |||| | || || ||| | | | ||| |||
Sbjct 1406 T-GGTTTTTGAAAAAGAAGGAAAAACAATATGCGACCTCACTCATGACACTATAAATATC 1464
Query 502 ATTGGAGAGGCTGGATACTTGAGGGCATTGGATCTCGTTGGAGATTATGGAGACCAAAGA 561
|||||||||| ||||| | | | | |||||| || | ||||| | |||| ||| |
Sbjct 1465 ATTGGAGAGGATGGATGCATAATGAAATTGGAGCT--T-GGAGAACCCGCAGACAAAA-A 1520
Query 562 -TGTAAGACAGATCTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGG 620
||| | || | |||||||||||||||||||| ||||||||||||||| || | ||||
Sbjct 1521 CTGTTGGCCACTTGTGTGCTCTTATGTTCCAAGTGTAGTGCAAATCAAGCTACATAAAGG 1580
Query 621 AGGGGAAAGGGAAGAAGAAAGCGA 644
||| ||||| ||||| |||||||
Sbjct 1581 AGGCAAAAGGAAAGAACAAAGCGA 1604
> Ahg905324 jgi|Araly1|905324|Al_scaffold_0003_2452
Length=1212
Score = 134 bits (72), Expect = 1e-30
Identities = 394/538 (73%), Gaps = 68/538 (13%)
Strand=Plus/Plus
Query 175 ATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTGGT 234
||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||| |
Sbjct 694 ATCTGTTTTGACTTTACAAGTGAGAGGTTTGGTCCGCTTCTGCCTTTGCCGTTTAGAACT 753
Query 235 GGGCATATT--GA-CTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTA 291
| |||| | || | |||| ||||||||||||| |||||||||||||| | ||||
Sbjct 754 --ACGTATTACAACCT-TGTGACCCTATCTTGTGTTAGGGAAGAGAAGCTTGCTGCTTTA 810
Query 292 CTTCAG-CACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTGA 350
|| | ||||||| | || | | |||| ||| ||||||||| || |||||
Sbjct 811 -TTTTGCCACGATG------GT--AT-T--G-TTGAGGTATGGATTACGACTAATATTGA 857
Query 351 -GACTGGAGAGGTGTTGTGGAGCAAGTTCTTGAGAGTGGAAACAGCTGGATTTGA-TA-- 406
| | | |||||| ||||||||||||||||| | | | | ||| ||| ||
Sbjct 858 GGCCAATA-AGGTGTCGTGGAGCAAGTTCTTGACTTTTG--A-TG-TGG--GTGACTACC 910
Query 407 -G-TTATGTTCCTATTATAAATGGA-AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCA 463
| ||| | ||| || || | || ||||||||||||||||||| ||| ||||||||||
Sbjct 911 GGATTA-G-TCC--TTGTACA--GATAGTTTCTTCATTGACGAGGTGAACAAAGTCGCCA 964
Query 464 TTG-GTTTTG--AAGATG-GGAATCGCCACACAATTAACATCATTGGAGAGGCTGGATAC 519
|| ||||| || | | ||||| || ||||| ||| |||||||||||| |||||||||
Sbjct 965 -TGATTTTTGATAAAACGTGGAATTGCAACACAGTTACCATCATTGGAGAAGCTGGATAC 1023
Query 520 TTGAGGGCAT-TGGATCTCGTTGGAGATTATGGAGACCAAAGAT-GTAAGACAGA-T-CT 575
| | | || | |||||| ||||| || |||||| || || | | | | |
Sbjct 1024 GTCCGAG-ATGTTGATCTC---GGAGAACCTGCCCACCAAA-ATAGTTTG-C-TATTGGT 1076
Query 576 GTGCT-CTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAAAGGGAAG 634
||| | ||||||||||||||||||||||||||||| |||||| | || | ||||| ||
Sbjct 1077 GTG-TCCTTATGTTCCAAGTTTAGTGCAAATCAAGAAACCTGCACGATGCAAAAGG-AA- 1133
Query 635 AAGA-AA-GCGAATTG-GAGAAGCTTCGATATGAT-GAAAACATG-TCGAGACTTGTC 687
|||| || || | || || || | || |||| | |||| |||| | ||||||||||
Sbjct 1134 AAGACAAAGC-AGTTTAGAAAACCATCAATATAAGCGAAA-CATGGT-GAGACTTGTC 1188
> Ahg925743 jgi|Araly1|925743|scaffold_201304.1
Length=1229
Score = 115 bits (62), Expect = 4e-25
Identities = 343/471 (73%), Gaps = 50/471 (11%)
Strand=Plus/Plus
Query 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTG 232
|||| ||||||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct 731 TAATTTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTCTGCCTCTGCCATTTAGTG 790
Query 233 -GTGGGCATATTG-ACTGTATGACGT---TATCTT-GTGTTAGAGAAGAGAAGCTTGCGG 286
|||| || || || || ||| |||||| | ||||||||||| ||| | | |
Sbjct 791 CTTGGG----GTGCACGGTTTG-CGTCACTATCTTCG-GTTAGAGAAGAAAAGATCACTG 844
Query 287 TTTTACTTCAGCACGATGAATC-AAATCCATATGAGCTTGACTTATCGATTACGACCAAG 345
|||| ||||| | | || | ||| ||||| | |||| ||| ||||||||| | |
Sbjct 845 CTTTATTTCAG-A--A--AAGCGAAA--CATATAAATTTGAGATATGGATTACGACTACG 897
Query 346 ATTGA-GACTGGAGAGGTGTTGTGGAGCAAGTTCTTGA-GAGTGGAAACAGCTGGA-TTT 402
||||| | | | | ||| ||||||||| ||||| | || |||| ||| | | ||
Sbjct 898 ATTGAGGCCAACA-ATGTGACGTGGAGCAATTTCTTCACGA-TGGATACA-TTATACCTT 954
Query 403 GATAGTTATGTTCCTATTATA-AATGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGC 461
|| ||| || ||||| || | ||||||||||||||||||||||||||||| ||
Sbjct 955 GA-CCAAATG---CTTTTATATAA--G-AGTTTCTTCATTGACGAGGAGAAGAAAGTTGC 1007
Query 462 CATTGGTTTT-GAAGATG--GGAATCGCCA-----C-ACA--ATTAACATCATTGGAGAG 510
| |||||| ||| | | |||| ||| | ||| ||||| ||||||||||||
Sbjct 1008 TGT-GGTTTTTGAAAAAGAAGGAAAA-CCAATATGCGACATTATTAATATCATTGGAGAG 1065
Query 511 GCTGGATACTTGAGGGCATTGGATCTCGTTGGAGATTATGGAGACCAAAGATGTAAGACA 570
| | ||| ||| | | |||||| || | ||||| | |||| |||| ||| | ||
Sbjct 1066 GATAGATGCTTAATGAAATTGGAGCT--T-GGAGAACCCGCAGACAAAAGGTGTTGGCCA 1122
Query 571 GATCTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGA 621
| ||||| |||||||||||||| ||||||||||||||| || | |||||
Sbjct 1123 CTTGTGTGCCCTTATGTTCCAAGTGTAGTGCAAATCAAGCTACATAAAGGA 1173
> Ahg345624 jgi|Araly1|345624|fgenesh1_pg.C_scaffold_4001966
Length=2085
Score = 115 bits (62), Expect = 4e-25
Identities = 173/224 (77%), Gaps = 18/224 (8%)
Strand=Plus/Plus
Query 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTG 232
|||| |||||||||||||||| ||||| ||||| || ||||| |||||||||| ||| |
Sbjct 665 TAATATGTTTTGATTTTACAAAAGAGAGGTTTGGGCCGCTTCTACCTCTGCCGTCTAGCG 724
Query 233 GT-GGG--C----ATAT-TGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGC 284
| ||| | |||| | | | | ||| ||||||||||||| |||||||||||||||
Sbjct 725 TTAGGGATCGTAAATATAT-A-TATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGC 782
Query 285 GGTTTTACTT-CAGCACGATGAATCAAATC-CA-TATGAGCTTGACTTATCGATTACGAC 341
| |||| || |||| | ||||||| | | | | | | |||| ||| |||||||||
Sbjct 783 AGCTTTA-TTCCAGCGCCCTGAATCATA-CGAACT-TTATTTTGAGATATGGATTACGAC 839
Query 342 CAAGATTGAGACTGGAGA-GGTGTTGTGGAGCAAGTTCTTGAGA 384
||||||||| | || | ||||| |||||||||||||||||||
Sbjct 840 TAAGATTGAGGC-CGAAATGGTGTCGTGGAGCAAGTTCTTGAGA 882
Score = 60.2 bits (32), Expect = 2e-08
Identities = 148/201 (74%), Gaps = 19/201 (9%)
Strand=Plus/Plus
Query 493 ATTAACATCATTGGAGAGGCTGGATACTTGAGGGCATTGGATCTCGTTGGAGATTATGGA 552
||||||||||||||||||||||||||||| | |||||||| || | | ||| |
Sbjct 1804 ATTAACATCATTGGAGAGGCTGGATACTTAAAAATATTGGATCCCG--G-A--TTACCTA 1858
Query 553 GACCAAAGAT-GTAAGACA-GATCTGTGCTCTTATGTTCCAAGTTT-AGTGCAAATCAAG 609
|||||| | || | || | | |||||||||||||||||||||| | | | |||||||
Sbjct 1859 -ACCAAA-ACCGTTGGCCACG-TGTGTGCTCTTATGTTCCAAGTTTGA-TCCCAATCAAG 1914
Query 610 CAACCTGAAGGAG-GGG-AAAGGGA-AGAAGAAAGCGAATTG-GAGAAGCTTCGATATGA 665
||| | | | | ||| ||| | |||| |||| | || || |||| |||| |||
Sbjct 1915 AAACTTTCACGTGTGGGCAAAAATATAGAACAAAGT-AGTTTAGAAAAGCAACGATTTGA 1973
Query 666 TGAAAACATGT-CGAGACTTG 685
| |||||| || |||||||||
Sbjct 1974 TCAAAACA-GTTCGAGACTTG 1993
> Ahg925736 jgi|Araly1|925736|scaffold_201297.1
Length=1231
Score = 100 bits (54), Expect = 1e-20
Identities = 379/525 (72%), Gaps = 65/525 (12%)
Strand=Plus/Plus
Query 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCC-T--CT---TCTGCCTCTGCCGT 226
|||||||||||||||||||||||||||||||||| || | || ||| ||||||||||
Sbjct 739 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGACCGTTTCTGCCTCTTCCTCTGCCGT 798
Query 227 TTAGTGG-T-GG--G-CATATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCT 281
|||| || | || | || | || ||| | | | ||||| |||||||| |||||| |
Sbjct 799 TTAG-GGATTGGAAGGCACAATG--TGTTTCTC-T-ATCTTCAGTTAGAGACGAGAAGAT 853
Query 282 TGCGGTTTTACTT-CA-GCACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACG 339
|||| ||| ||| || | | | ||| || || | | | |||| ||| |||||||
Sbjct 854 CGCGGCTTT-CTTTCAAGAAAGGGGAA-CATATA-A-A--A--TTGAGATATGGATTACG 905
Query 340 ACCAAGATTGAGACTGGAGAGGTGT-TGTGGAGCAAGTTCTTGAGAGTGGAA-ACAGCTG 397
|| ||||||||||| | | | || | | |||||||| ||||| | | | || | ||
Sbjct 906 ACTAAGATTGAGACCGAAAATGTCTCT-TGGAGCAATTTCTTCACAACG-AATAT-GCC- 961
Query 398 GATTTGATAGTTATGTTCCTATTA---TAAATGGAAGTTTCTTCATTGACGAGGAGAAGA 454
|| || || || | |||| | | || | | ||||||||||||| |||||||| |
Sbjct 962 -ATC--AT-GT-AT-TGGCTAT-AGGCTTAA-G-A-GTTTCTTCATTGAGGAGGAGAA-A 1010
Query 455 -AAGTCGCCATTGGTTTTGA-A--GATGGGAA---TC---GCCACACAATTAACATCATT 504
|||| || ||| |||||| | || || || || || | || ||| | ||||||
Sbjct 1011 CAAGTTGCTGTTGTTTTTGACAAAGAAGGAAAAAATCTATGCGATACTATTCATATCATT 1070
Query 505 GGAGAGGCTGGATACTTGAGGGCATTGGATCTCGTTGGAGATTATGGAGACCAAA-GATG 563
||||||||||||| ||||||| | |||| || | ||||| ||| ||| | ||
Sbjct 1071 GGAGAGGCTGGATGCTTGAGGAAAGTGGAGCT--T-GGAGAACCCACAGAAAAAAAG-TG 1126
Query 564 TAAGACAGATCTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGG 623
| | || | |||||||||||||||||||| ||||||||||||||| || | ||| |||
Sbjct 1127 TTTGCCACTTGTGTGCTCTTATGTTCCAAGTATAGTGCAAATCAAGCTACATAAAGAAGG 1186
Query 624 GGAAAGGGAAGAAGAAAGCGAATT-GGAGAAG-CTTCGATATGAT 666
||||| ||||| ||||||| || ||| ||| | || |||||||
Sbjct 1187 CAAAAGGAAAGAACAAAGCGA-TTAGGA-AAGACATCAATATGAT 1229
> Ahg923074 jgi|Araly1|923074|scaffold_104355.1
Length=1079
Score = 75.0 bits (40), Expect = 7e-13
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 171 CTTAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTT 228
||| ||||||||||||||||||||||||||||||| || | ||| ||||||||||||
Sbjct 633 CTTGATCTGTTTTGATTTTACAAGTGAGAGATTTGAACCGCGTCTTCCTCTGCCGTTT 690
> Ahg342698 jgi|Araly1|342698|fgenesh1_pg.C_scaffold_3002461
Length=1110
Score = 73.1 bits (39), Expect = 3e-12
Identities = 141/187 (75%), Gaps = 20/187 (11%)
Strand=Plus/Plus
Query 430 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTT-GA-AGATGGGA-ATCG- 485
|||||||||||||||||||||||||||||||| | |||||| || | || | | ||
Sbjct 922 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGT-GGTTTTTGATAAATACTACAACGA 980
Query 486 -C--CACA-CA-A--TTAACATCATTGGAGAGGCTGGATACTTGAGGGCATTGGATCTCG 538
| | || || | ||| ||||||||||| || ||||| ||| | ||| |||||||||
Sbjct 981 TCGGCGCAGCATAGCTTA-CATCATTGGAGTGGATGGATCCTTCAAAGCAGTGGATCTCG 1039
Query 539 TTGGAGATTATGG-AGAC-CAAAGATGTAAGACAGATCTGTGCTCTTATGTTCCAAGTTT 596
| ||| | || | || ||| | ||| | || | |||||||||||||||||||| |
Sbjct 1040 --G-AGAATC-GGCATACGCAATG-TGTTACCCACTTGTGTGCTCTTATGTTCCAAGTAT 1094
Query 597 AGTGCAA 603
|||||||
Sbjct 1095 AGTGCAA 1101
> Ahg937320 jgi|Araly1|937320|scaffold_501511.1
Length=1211
Score = 71.3 bits (38), Expect = 9e-12
Identities = 48/53 (91%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 172 TTAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCC 224
||| ||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct 655 TTACTCTGTTTTGATTTTACAAGTGAGAGATTTGGACCGCCCCTGCCTCTGCC 707
> Ahg929886 jgi|Araly1|929886|scaffold_302343.1
Length=742
Score = 63.9 bits (34), Expect = 2e-09
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand=Plus/Plus
Query 426 TGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTT 469
||| ||||||||||||||||||||||||||||||||| | ||||
Sbjct 399 TGGCAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCGT-GGTT 441
> Ahg479258 jgi|Araly1|479258|fgenesh2_kg.3__1959__AT3G19470.1
Length=1263
Score = 60.2 bits (32), Expect = 2e-08
Identities = 39/42 (93%), Gaps = 1/42 (2%)
Strand=Plus/Plus
Query 430 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTT 471
|||||||||||||||||||||||||||||||| | ||||||
Sbjct 1010 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGT-GGTTTT 1050
> Ahg929147 jgi|Araly1|929147|scaffold_301604.1
Length=1290
Score = 54.7 bits (29), Expect = 9e-07
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Plus
Query 430 AGTTTCTTCATTGACGAGGAGAAGAAAGT 458
|||||||||||||||||||||||||||||
Sbjct 1003 AGTTTCTTCATTGACGAGGAGAAGAAAGT 1031
> Ahg485308 jgi|Araly1|485308|fgenesh2_kg.5__1300__AT3G49510.1
Length=2011
Score = 52.8 bits (28), Expect = 3e-06
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 433 TTCTTCATTGACGAGGAGAAGAAAGTCG 460
||||||||||||||||||||||||||||
Sbjct 992 TTCTTCATTGACGAGGAGAAGAAAGTCG 1019
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 26037952311
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5