BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G24300.1
Length=1758
Score E
Sequences producing significant alignments: (Bits) Value
Ahg479942 jgi|Araly1|479942|fgenesh2_kg.3__2643__AT3G24300.1 2473 0.0
Ahg930518 jgi|Araly1|930518|scaffold_302975.1 1692 0.0
Ahg484193 jgi|Araly1|484193|fgenesh2_kg.5__185__AT4G13510.1 837 0.0
Ahg493564 jgi|Araly1|493564|fgenesh2_kg.7__2997__AT4G13510.1 793 0.0
Ahg493556 jgi|Araly1|493556|fgenesh2_kg.7__2989__AT4G13510.1 782 0.0
Ahg358961 jgi|Araly1|358961|fgenesh1_pg.C_scaffold_9000001 486 2e-136
> Ahg479942 jgi|Araly1|479942|fgenesh2_kg.3__2643__AT3G24300.1
Length=1592
Score = 2473 bits (1339), Expect = 0.0
Identities = 1490/1564 (95%), Gaps = 6/1564 (0%)
Strand=Plus/Plus
Query 4 tctctctttctctctctcagctctctcAAACATGTCAGGAGCAATAACATGCTCTGCGGC 63
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 1 TCTCTCTTTCTCTCTCTCAGCTCTCTCAAACATGGCAGGAGCTATAACATGCTCTGCGGC 60
Query 64 CGATCTCGCCACCCTACTTGGCCCCAACGCCACGGCGGCGGCCGACTACATTTGCGGCCA 123
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct 61 CGATCTCGCCACCCTACTTGGTCCCAACGCCACCGCGGCGGCCGACTACATTTGCAGCCA 120
Query 124 ATTAGGCACCGTTAACAACAAGTTCACCGATGCAGCCTTCGCCATAGACAACACCTACCT 183
||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct 121 GTTAGGTACCGTTAACAACAAGTTCACCGATGCAGCCTTTGCCATCGACAACACATACCT 180
Query 184 CCTCTTCTCTGCCTACCTTGTCTTCGCCATGCAGCTCGGCTTCGCTATGCTTTGTGCTGG 243
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 181 CCTCTTCTCTGCCTACCTTGTCTTCTCCATGCAGCTCGGCTTCGCTATGCTTTGCGCTGG 240
Query 244 TTCTGTTAGAGCCAAGAATACGATGAACATCATGCTTACCAATGTCCTTGACGCTGCAGC 303
|| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 241 CTCCGTTAGAGCCAAGAATACGATGAACATCATGCTTACCAATGTTCTTGATGCTGCAGC 300
Query 304 CGGAGGACTCTTCTACTATCTCTTTGGTTACGCCTTTGCCTTTGGAGGATCCTCCGAAGG 363
|||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 301 CGGAGGACTCTTTTACTATCTCTTTGGTTACGCCTTTGCCTTCGGCGGATCTTCCGAAGG 360
Query 364 GTTCATTGGAAGACACAACTTTGCTCTTAGAGACTTTCCGACTCCCACAGCTGATTACTC 423
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 361 ATTCATTGGAAGACACAACTTTGCTCTTAGAGACTTCCCGACTCCCACAGCTGATTACTC 420
Query 424 TTTCTTCCTCTACCAATGGGCGTTCGCAATCGCGGCCGCTGGAATCACAAGTGGTTCGAT 483
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 421 TTTCTTCCTCTATCAATGGGCGTTCGCAATCGCGGCCGCTGGAATCACAAGTGGTTCCAT 480
Query 484 CGCAGAGAGGACTCAGTTCGTGGCTTACTTGATATACTCTTCTTTCTTAACCGGATTTGT 543
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 AGCGGAGAGGACTCAGTTCGTGGCTTACTTGATATACTCTTCTTTCTTAACCGGATTTGT 540
Query 544 TTACCCGGTTGTCTCTCACTGGTTTTGGTCCCCGGATGGATGGGCCAGTCCCTTTCGTTC 603
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 541 TTACCCTATTGTCTCTCACTGGTTTTGGTCCCCGGATGGATGGGCCAGTCCCTTCCGTTC 600
Query 604 AGCGGATGATCGTTTGTTTAGCACCGGAGCCATTGACTTTGCTGGCTCCGGTGTTGTTCA 663
|||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 601 AGCGGAAGATCGTTTGTTTAGCACCGGAGCCATCGACTTTGCTGGCTCCGGAGTTGTTCA 660
Query 664 CATGGTTGGTGGCATAGCAGGTTTATGGGGTGCTCTTATTGAAGGTCCTCGTCGTGGTCG 723
|||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
Sbjct 661 CATGGTTGGTGGCATAGCAGGTTTGTGGGGTGCTCTTATCGAAGGTCCTCGTCGTGGTAG 720
Query 724 GTTCGAGAAAGGTGGTCGCGCTATTGCTCTGCGCGGCCACTCTGCCTCGCTAGTAGTCTT 783
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 721 GTTCGAGAAAGGTGGTCGCGCTATTGCTCTGCGCGGCCACTCTGCCTCGCTTGTAGTGTT 780
Query 784 AGGAACCTTCCTCCTATGGTTTGGATGGTATGGTTTCAACCCCGGTTCCTTCACTAAGAT 843
||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct 781 AGGAACCTTCCTCCTATGGTTCGGCTGGTATGGTTTCAACCCGGGTTCCTTCACTAAGAT 840
Query 844 ACTCGTTCCGTATAATTCTGGTTCCAACTACGGCCAATGGAGCGGAATCGGCCGTACAGC 903
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 841 ACTCGTTCCGTATAATTCTGGTTCCAACTACGGCCAATGGAGCGGAATTGGCCGCACAGC 900
Query 904 GGTTAACACCACACTCTCAGGATGCACAGCAGCTCTAACCACACTCTTTGGTAAACGTCT 963
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 901 GGTTAACACCACACTCTCAGGATGCACCGCAGCTCTAACCACACTCTTTGGTAAACGTCT 960
Query 964 CCTATCAGGCCACTGGAACGTAACGGACGTTTGCAACGGGTTACTCGGTGGGTTTGCGGC 1023
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 961 TCTATCAGGCCACTGGAACGTAACGGACGTTTGCAACGGGTTACTCGGTGGATTTGCGGC 1020
Query 1024 CATAACCGCAGGTTGCTCCGTCGTAGAGCCATGGGCAGCGATTGTGTGCGGCTTCATGGC 1083
||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||
Sbjct 1021 CATAACCGCAGGTTGCTCCGTGGTAGAGCCATGGGCAGCTATCGTCTGCGGCTTCATGGC 1080
Query 1084 TTCTGTCGTCCTTATCGGATGCAACAAGCTCGCGGAGCTTGTACAATATGATGATCCACT 1143
||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1081 TTCCCTCGTTCTTATCGGATGCAACAAGCTCGCGGAGCTCGTACAATATGATGATCCACT 1140
Query 1144 CGAGGCAGCCCAACTACATGGAGGGTGTGGCGCGTGGGGGTTGATATTCGTAGGATTGTT 1203
|||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1141 CGAGGCGGCCCAACTACACGGAGGGTGTGGCGCGTGGGGGTTGATATTTGTAGGATTGTT 1200
Query 1204 TGCCAAAGAGAAGTATCTAAACGAGGTTTATGGCGCCACCCCGGGAAGGCCATATGGACT 1263
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 1201 TGCCAAAGAGAAGTATCTAAACGAGGTTTATGGCACCACCCCGGGAAGGCCCTATGGACT 1260
Query 1264 ATTTATGGGCGGAGGAGGGAAGCTGTTGGGAGCACAATTGGTTCAAATACTTGTGATTGT 1323
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 ATTTATGGGCGGAGGAGGGAAGCTGTTGGGAGCACAATTGGTTCAAATACTTGTGATTGC 1320
Query 1324 AGGATGGGTTAGTGCCACAATGGGAACACTCTTCTTCATCCTCAAAAGGCTCAATCTGCT 1383
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1321 GGGATGGGTTAGTGCCACAATGGGAACACTCTTCTTCATCCTCAAAAAACTCAATCTGCT 1380
Query 1384 TAGGATCTCGGAGCAGCATGAAATGCAAGGGATGGATATGACACGTCACGGTGGCTTTGC 1443
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1381 TAGGATCTCGGAGCAGCATGAAATGCAAGGAATGGATATGACACGTCACGGTGGCTTTGC 1440
Query 1444 TTATATCTACCATGATAATGATGATGA-G-T-CTCATAGAGTGGATCCTGGATCTCCTTT 1500
||||||||||||||||||| ||||||| | | |||||||||||| |||||||||||||||
Sbjct 1441 TTATATCTACCATGATAATAATGATGACGATTCTCATAGAGTGGGTCCTGGATCTCCTTT 1500
Query 1501 CCCTCGATCAGCTACTCCTCCTCGCgtttaattttcaa-ctttttggtaatttattaccg 1559
|||||| || | |||||||||||||||||||||||||| ||||| | |||||||||||||
Sbjct 1501 CCCTCGGTCGGTTACTCCTCCTCGCGTTTAATTTTCAAGCTTTT-G-TAATTTATTACCG 1558
Query 1560 ttta 1563
||||
Sbjct 1559 TTTA 1562
> Ahg930518 jgi|Araly1|930518|scaffold_302975.1
Length=1531
Score = 1692 bits (916), Expect = 0.0
Identities = 1339/1543 (87%), Gaps = 30/1543 (2%)
Strand=Plus/Plus
Query 14 tctctctc-agctctctcAAACATGTCAGGAGCAATAACATGCTCTGCGGCCGATCTCGC 72
|||||||| || ||||| || |||||| ||||| ||||| |||||||| || |||||| |
Sbjct 1 TCTCTCTCAAG-TCTCT-AAGCATGTCGGGAGCTATAACTTGCTCTGCAGCTGATCTCTC 58
Query 73 CACCCTACTTGGCCCCAACGCCACGGCGGCGGCCGACTACATTTGCGGCCAATTAGGCAC 132
||||||| |||||||| || || |||||||| ||||||||||||||||||| || ||
Sbjct 59 TGCCCTACTCGGCCCCAATGCAACCGCGGCGGCTAACTACATTTGCGGCCAATTGGGTAC 118
Query 133 CGTTAACAACAAGTTCACCGATGCAGCCTTCGCCATAGACAACACCTACCTCCTCTTCTC 192
||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||
Sbjct 119 CGTTAACAACAAGTTTACCGATGCAGCCTACGCTATAGACAACACTTACCTCCTCTTCTC 178
Query 193 TGCCTACCTTGTCTTCGCCATGCAGCTCGGCTTCGCTATGCTTTGTGCTGGTTCTGTTAG 252
||||| || |||||||| |||||||| || |||||||||||||||||||| || |||||
Sbjct 179 CGCCTATCTCGTCTTCGCGATGCAGCTTGGTTTCGCTATGCTTTGTGCTGGCTCCGTTAG 238
Query 253 AGCCAAGAATACGATGAACATCATGCTTACCAATGTCCTTGACGCTGCAGCCGGAGGACT 312
||||||||| ||||||||||||||||| || ||||||||||| |||||||| ||||||||
Sbjct 239 AGCCAAGAACACGATGAACATCATGCTCACTAATGTCCTTGATGCTGCAGCTGGAGGACT 298
Query 313 CTTCTACTATCTCTTTGGTTACGCCTTTGCCTTTGGAGGATCCTCCGAAGGGTTCATTGG 372
||||||||||||||||||||| |||||||||||||| | |||||| || || ||||| ||
Sbjct 299 CTTCTACTATCTCTTTGGTTATGCCTTTGCCTTTGGCGAATCCTCTGATGGATTCATCGG 358
Query 373 AAGACACAACTTTGCTCTTAGAGACTTTCCGACTCCCACAGCTGATTACTCTTTCTTCCT 432
|||||||||||||| ||||| | |||||||||||| ||| | |||||||| ||||||||
Sbjct 359 AAGACACAACTTTGGTCTTAAAAACTTTCCGACTCTCACTTCGGATTACTCCTTCTTCCT 418
Query 433 CTACCAATGGGCGTTCGCAATCGCGGCCGCTGGAATCACAAGTGGTTCGATCGCAGAGAG 492
|||||||||||| || || ||||| |||||||||||||| || |||||||| || |||||
Sbjct 419 CTACCAATGGGCCTTTGCTATCGCCGCCGCTGGAATCACCAGCGGTTCGATTGCCGAGAG 478
Query 493 GACTCAGTTCGTGGCTTACTTGATATACTCTTCTTTCTTAACCGGATTTGTTTACCCGGT 552
|||| |||||||||| || ||||||||||||||||| || ||||| ||||||||||||||
Sbjct 479 GACTAAGTTCGTGGCGTATTTGATATACTCTTCTTTTTTGACCGGGTTTGTTTACCCGGT 538
Query 553 TGTCTCTCACTGGTTTTGGTCCCCGGATGGATGGGCCAGTCCCTTTCGTTCAGCGGATGA 612
|| ||||||||||| ||||| ||||| |||||||| ||||| ||||||||| || ||
Sbjct 539 CGTTTCTCACTGGTTCTGGTCTCCGGACGGATGGGCTAGTCCGTTTCGTTCA---GAAGA 595
Query 613 TCGTTTGTTTAGCACCGGAGCCATTGACTTTGCTGGCTCCGGTGTTGTTCACATGGTTGG 672
||||||||| ||||||||||||| |||||||| || || ||||||||||||||||||||
Sbjct 596 CCGTTTGTTTGGCACCGGAGCCATCGACTTTGCGGGGTCAGGTGTTGTTCACATGGTTGG 655
Query 673 TGGCATAGCAGGTTTATGGGGTGCTCTTATTGAAGGTCCTCGTCGTGGTCGGTT-CGAGA 731
||| || || || |||||||| || ||||| ||||||||||| ||| ||||| | |
Sbjct 656 TGGTATCGCTGGATTATGGGGAGCCCTTATCGAAGGTCCTCGGATTGGCCGGTTCCCTG- 714
Query 732 AAGGTGGTCGCGCTATTGCTCTGCGCGGCCACTCTGCCTCGCTAGTAGTCTTAGGAACCT 791
| || |||| ||||||||||||||||||||||||||||| || || |||||||| ||||
Sbjct 715 ATGGGGGTCATGCTATTGCTCTGCGCGGCCACTCTGCCTCACTCGTCGTCTTAGGGACCT 774
Query 792 TCCTCCTATGGTTTGGATGGTATGGTTTCAACCCCGGTTCCTTCACTAAGATACTCGTTC 851
|||| || |||||||| |||||||| |||||||| ||||||||||| ||||||||| |||
Sbjct 775 TCCTTCTCTGGTTTGGTTGGTATGGGTTCAACCCTGGTTCCTTCACCAAGATACTCATTC 834
Query 852 CGTATAATTCTGGTTCCAACTACGGCCAATGGAGCGGAATCGGCCGTACAGCGGTTAAC- 910
| || |||||||| |||||||| ||||||||||| ||||| ||||| || |||||| ||
Sbjct 835 CTTACAATTCTGGATCCAACTATGGCCAATGGAGTGGAATAGGCCGCACGGCGGTT-ACA 893
Query 911 ACCACACTCTCAGGATGCACAGCAGCTCTAACCACACTCTTTGGTAAACGTCTCCTATCA 970
|| |||||||| ||||||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct 894 ACTACACTCTCGGGATGCACAGCGGCTCTAACCACCCTCTTCGGAAAACGTCTCCTATCA 953
Query 971 GGCCACTGGAACGTAACGGACGTTTGCAACGGGTTACTCGGTGGGTTTGCGGCCATAACC 1030
||||||||||||||||| || ||||||||||| ||||| || ||||||||||||||||||
Sbjct 954 GGCCACTGGAACGTAACCGATGTTTGCAACGGTTTACTTGGCGGGTTTGCGGCCATAACC 1013
Query 1031 GCAGGTTGCTCCGTCGTAGAGCCATGGGCAGCGATTGTGTGCGGCTTCATGGCTTCTGTC 1090
|||||||||||||| || || |||||||||||||| || ||||||||||||||||| ||
Sbjct 1014 GCAGGTTGCTCCGTGGTTGATCCATGGGCAGCGATCGTATGCGGCTTCATGGCTTCCCTC 1073
Query 1091 GTCCTTATCGGATGCAACAAGCTCGCGGAGCTTGTACAATATGATGATCCACTCGAGGCA 1150
||||||||||||||||||||||||||||||||| || |||| |||||||| || |||||
Sbjct 1074 GTCCTTATCGGATGCAACAAGCTCGCGGAGCTTTTAAAATACGATGATCCGCTAGAGGCC 1133
Query 1151 GCCCAACTACATGGAGGGTGTGGCGCGTGGGGGTTGATATTCGTAGGATTGTTTGCCAAA 1210
|| |||||||| ||||||||||| || ||||| |||||||| |||||| | ||||| |||
Sbjct 1134 GCACAACTACACGGAGGGTGTGGTGCTTGGGGTTTGATATTTGTAGGACTATTTGCAAAA 1193
Query 1211 GAGAAGTATCTAAACGAGGTTTATGGCGCCACCCCGGGAAGGC-CATATGGACTATTTAT 1269
||||||||| |||| |||||||| ||||| | ||||||||||| | || |||||||||||
Sbjct 1194 GAGAAGTATGTAAATGAGGTTTACGGCGCAAGCCCGGGAAGGCAC-TACGGACTATTTAT 1252
Query 1270 GGGCGGAGGAGGGAAGCTGTTGGGAGCACAATTGGTTCAAATACTTGTGATTGTAGGATG 1329
||| |||||||||||||| ||||||||||||||||| |||||| |||||||||| |||||
Sbjct 1253 GGGAGGAGGAGGGAAGCTATTGGGAGCACAATTGGTCCAAATAATTGTGATTGTTGGATG 1312
Query 1330 GGTTAGTGCCACAATGGGAACACTCTTCTTCATCCTCAAAAGGCTCAATCTGCTTAGGAT 1389
|||||||||||||||||||||||||||||| || || |||| ||||||| ||||||||||
Sbjct 1313 GGTTAGTGCCACAATGGGAACACTCTTCTTTATGCTTAAAAAGCTCAATTTGCTTAGGAT 1372
Query 1390 CTCGGA-GCAGCATGAAATGCAAGGGATGGATAT-GACACGTCACGGTGGCTTTGCTTAT 1447
|||| | | || |||| |||||||| |||||||| | ||||||||||||| |||||||||
Sbjct 1373 CTCGAATG-AGGATGAGATGCAAGGAATGGATATAG-CACGTCACGGTGGTTTTGCTTAT 1430
Query 1448 ATCTACCATGATAATGATGATGAGTCTCATA-GAGTGGATCCTGGATCTCCTTTCCCTCG 1506
||||||||||||||||||||||| || ||| ||||| ||||||||||| | |||||
Sbjct 1431 ATCTACCATGATAATGATGATGACTC-CATTCGAGTG---CCTGGATCTCCAATACCTCG 1486
Query 1507 AT-CAGC-TA-CTCCTCCTCG-Cgtttaattttcaac-ttttt 1544
| | || || | ||||| | |||||||||||||| |||||
Sbjct 1487 -TGC-GCCTAAC-CCTCCA-GACGTTTAATTTTCAAGATTTTT 1525
> Ahg484193 jgi|Araly1|484193|fgenesh2_kg.5__185__AT4G13510.1
Length=1598
Score = 837 bits (453), Expect = 0.0
Identities = 1113/1425 (78%), Gaps = 71/1425 (5%)
Strand=Plus/Plus
Query 86 CCCAACGCCACGGCGGCGGCCGACTACATTTGCGGCCAATTAGGCACCGTTAACAACAAG 145
||||| ||||||| ||| ||| ||||||| || ||||| || || ||| ||||||||
Sbjct 62 CCCAATGCCACGGAGGCTGCCAACTACATCTGTGGCCAGCTAAGCGTCGTCGACAACAAG 121
Query 146 TTCACCGATGCAGCCTTCGCCATAGACAACACCTACCTCCTCTTCTCTGCCTACCTTGTC 205
|||| ||| || || ||||||||||||| ||| |||||||||||||| || |||||||||
Sbjct 122 TTCATCGACGCCGCTTTCGCCATAGACACCACTTACCTCCTCTTCTCCGCTTACCTTGTC 181
Query 206 TTCGCCATGCAGCTCGGCTTCGCTATGCTTTGTGCTGGTTCTGTTAGAGCCAAGAATACG 265
||| | |||||||| |||||||||||||| ||||| ||||| || |||||||||||||||
Sbjct 182 TTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCGTAAGAGCCAAGAATACG 241
Query 266 ATGAACATCATGCTTACCAATGTCCTTGACGCTGCAGCCGGAGGACTCTTCTACTATCTC 325
|||||||||||||||||||| || ||||| ||||| |||||||| ||||| ||||||||
Sbjct 242 ATGAACATCATGCTTACCAACGTTCTTGATGCTGCGGCCGGAGGTCTCTTTTACTATCTA 301
Query 326 TTTGGTTACGCCTTTGCCTTTGGAGGATCC-TCCGAAGGGTT-CATTGG-AAGACACAAC 382
||||| || || |||||||||||| ||| ||| || |||| |||||| || |||| ||
Sbjct 302 TTTGGCTATGCTTTTGCCTTTGGATC-TCCGTCC-AATGGTTTCATTGGTAA-ACACTAC 358
Query 383 TTTGCTCTTAGAGACTTTCCG-ACTCCCACAGCTGATTACTCT--TTCTTCCTCTACCAA 439
|||| ||| | ||| | ||| || |||| |||||||| || || ||| ||||||||
Sbjct 359 TTTGGTCTCAAAGA-TATCCCCACGGCCACTGCTGATTATTCCAATT-TTC-TCTACCAA 415
Query 440 TGGGCGTTCGCAATCGCGGCCGCTGGAATCACAAGTGGTTCGATCGCAGAGA-GGACTCA 498
||||| || || || || || ||||||||||| |||||||||||||| || | |||||||
Sbjct 416 TGGGCCTTTGCTATAGCCGCGGCTGGAATCACTAGTGGTTCGATCGCTGA-ACGGACTCA 474
Query 499 GTTCGTGGCTTACTTGATATACTCTTCTTTCTTAACCGGATTTGTTTACCCGGTTGTCTC 558
||||||||||||| | || || || |||||||||||||| |||||||||||||| || ||
Sbjct 475 GTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACCCGGTCGTGTC 534
Query 559 TCACTGGTTTTGGTCCCCGGATGGATGGGCCAGTCCCTTTCGTTCAGC-GGATGATC-GT 616
||||||||| ||||| ||||||||||||||||| || || | | ||| ||| |
Sbjct 535 TCACTGGTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACCGATGGA-GATTTGC 593
Query 617 TTGTTTAGCACCGGAGCCATTGACTTT-GCTGGCTCCGGTGTTGTTCACATGGTTGGTGG 675
|| || || |||||||| || || ||| |||||||||||||||||||| ||||| || ||
Sbjct 594 TT-TTCAGAACCGGAGCGATCGA-TTTCGCTGGCTCCGGTGTTGTTCATATGGTCGGAGG 651
Query 676 CATAGCAGGTTTATGGGGTGCTCTT-ATTGAAGGTCCTCGTCGT-GGTCGGTTCGAGAAA 733
|| || || | ||||| || || |||||||| || || | | || |||||||| ||
Sbjct 652 TATCGCTGGACTCTGGGGAGCG-TTCATTGAAGGACCACGAC-TCGGCCGGTTCGATAAC 709
Query 734 GGTGGTCGCGCTATTGCTCTGCGCGGCCACTCTGCCTCGCTAGTAGTC-TTAGGAACCTT 792
||||| || || || ||||| || |||||||| || || || || ||| || ||||| ||
Sbjct 710 GGTGGCCGTGCCATCGCTCTTCGTGGCCACTCAGCGTCACTTGTTGTCCTT-GGAACATT 768
Query 793 CCTCCTATGGTTTGGATGGTATGGTTTCAACCCCGGTTCCTTCA-CTAAGATACTCGTTC 851
|||||| |||||||||||||| || |||||||||||||| |||| | ||||| || || |
Sbjct 769 CCTCCTTTGGTTTGGATGGTACGGATTCAACCCCGGTTCTTTCAAC-AAGATCCTAGT-C 826
Query 852 -CGTAT-AATTCTGGTTCCAA-CTACGGCCAATGGAGCG-GAATCGGCCGTACAGCGGTT 907
| || || | || | | | | ||||| ||||||| | |||| || || || ||
Sbjct 827 ACATACCAAA-CAGGAACGTATCAA-GGCCAGTGGAGCGCGG-TCGGACGGACGGCCGTC 883
Query 908 AAC-ACCACACTCT--CAGGATGCACAGCAGCTCTAACCACACTCTTTGGTAAACGTCTC 964
| | ||||| || | | || ||||| || || || || || ||||| || ||||||||
Sbjct 884 A-CTACCAC-CT-TAGCCGGCTGCACCGCGGCGCTCACGACTCTCTTCGGAAAACGTCTT 940
Query 965 CTATCAGGCCACTGGAACGTAACGGACGTTTGCAACGGGT-TACTCGGTGGGTTTGCGGC 1023
|| || ||||| |||||||| || || || || ||||| | | ||||| |||||||| ||
Sbjct 941 CTCTCTGGCCATTGGAACGTCACCGATGTATGTAACGG-TCTCCTCGGAGGGTTTGCAGC 999
Query 1024 CATAACCG-CAGGTTGCTCCGTCGTAGAGCCATGGGCAGCGATTGTGTGCGGCTTCATGG 1082
||||||| | || ||||||||||||||||||||||||||||| | ||||| ||| | |
Sbjct 1000 AATAACCGGC-GGCTGCTCCGTCGTAGAGCCATGGGCAGCGATCATCTGCGGGTTCGTAG 1058
Query 1083 CTTCTGTCGTCCTTATCGGATGCAACAAGCTCGCGGAGCTTGTACAA-TATGATGATCCA 1141
| || ||||||| ||||||||||||||||||||||| | ||| || || || |||
Sbjct 1059 CGGCTCTCGTCCTCCTCGGATGCAACAAGCTCGCGGAGAAACT-CAAATACGACGACCCA 1117
Query 1142 CTCGAGGCAGCCCAACTACATGGAGGGTGTGGCGCGTGGGGGTTGATATTCGTAG-GATT 1200
||||||||||| || || || || || || |||||||||||| | || || || | ||
Sbjct 1118 CTCGAGGCAGCACAGCTCCACGGCGGTTGCGGCGCGTGGGGGCTAATTTTTACAGCGCTT 1177
Query 1201 GTTTGCCAAAGAGAA-GTATCT-AAACGAGGTTTATGGCGCCAC-CCCGGGAAGGCCATA 1257
|| || | || || ||| || |||| |||||||||||| || ||||| |||||| ||
Sbjct 1178 -TTCGCTGA-GAAAAAGTA-CTTAAACCAGGTTTATGGCGACAGACCCGG-AAGGCCTTA 1233
Query 1258 TGGACTATTTATGGGCGGAGGAGGGAAGCTG-TTGGGAGCACAATTGGTTCAAATACTTG 1316
|| | || ||||| || ||||| || || |||| ||| || || |||||||| |||
Sbjct 1234 CGGTTTGTTCATGGGTGGTGGAGGAAAACTCCTTGG-AGCTCAGCTGATTCAAATAATTG 1292
Query 1317 TGATTGTAGGATGGGTTAGTGCCACAATGGGAACACTCTTCTTCATCCTCAA-AAGGCTC 1375
|||| ||| |||||||||| || ||||| ||||| ||||| |||||||| || |
Sbjct 1293 TGATCACAGGTTGGGTTAGTGTGACCATGGGTACACTTTTCTTTATCCTCAAGAAAA-TG 1351
Query 1376 AA-TCTGCTTA-GGATCTCGG-AGCAGCATGAAATG-CAAGGGATGGATATGACACGTCA 1431
|| | | || |||| || || || |||| ||| | || ||||||||||| || ||
Sbjct 1352 AAAT-TA-TTGCGGATATCATCAG-AGGATGAGATGGCC-GGTATGGATATGACCCGGCA 1407
Query 1432 CGGTGGCTTTGCTTATATCTACCATGATAATGATGATGAGTCTCA 1476
|||||| ||||||||||| ||||||||| ||||||||||||||
Sbjct 1408 CGGTGGTTTTGCTTATATGTACCATGAT---GATGATGAGTCTCA 1449
> Ahg493564 jgi|Araly1|493564|fgenesh2_kg.7__2997__AT4G13510.1
Length=1648
Score = 793 bits (429), Expect = 0.0
Identities = 1106/1426 (78%), Gaps = 73/1426 (5%)
Strand=Plus/Plus
Query 86 CCCAACGCCACGGCGGCGGCCGACTACATTTGCGGCCAATTAGGCACCGTTAACAACAAG 145
||||| ||||||| ||| ||| ||||||| || ||||| || || ||| ||||||||
Sbjct 62 CCCAATGCCACGGAGGCTGCCAACTACATCTGTGGCCAGCTAAGCGTCGTCGACAACAAG 121
Query 146 TTCACCGATGCAGCCTTCGCCATAGACAACACCTACCTCCTCTTCTCTGCCTACCTTGTC 205
|||| ||| || || ||||||||||||| ||| |||||||||||||| || |||||||||
Sbjct 122 TTCATCGACGCCGCTTTCGCCATAGACACCACTTACCTCCTCTTCTCCGCTTACCTTGTC 181
Query 206 TTCGCCATGCAGCTCGGCTTCGCTATGCTTTGTGCTGGTTCTGTTAGAGCCAAGAATACG 265
||| | |||||||| |||||||||||||| ||||| ||||| || |||||||||||||||
Sbjct 182 TTCTCTATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCGTAAGAGCCAAGAATACG 241
Query 266 ATGAACATCATGCTTACCAATGTCCTTGACGCTGCAGCCGGAGGACTCTTCTACTATCTC 325
|||||||||||||||||||| || ||||| ||||| |||||||| ||||| ||||||||
Sbjct 242 ATGAACATCATGCTTACCAACGTTCTTGATGCTGCGGCCGGAGGTCTCTTTTACTATCTA 301
Query 326 TTTGGTTACGCCTTTGCCTTTGGAGGATCC-TCCGAAGGGTT-CATTGG-AAGACACAAC 382
||||| || || |||||||||||| ||| ||| || |||| |||||| || |||| ||
Sbjct 302 TTTGGCTATGCTTTTGCCTTTGGATC-TCCGTCC-AATGGTTTCATTGGTAA-ACACTAC 358
Query 383 TTTGCTCTTAGAGACTTTCCG-ACTCCCACAGCTGATTACTCT--TTCTTCCTCTACCAA 439
|||| ||| | ||| | ||| || |||| |||||||| || || ||| ||||||||
Sbjct 359 TTTGGTCTCAAAGA-TATCCCCACGGCCACTGCTGATTATTCCAATT-TTC-TCTACCAA 415
Query 440 TGGGCGTTCGCAATCGCGGCCGCTGGAATCACAAGTGGTTCGATCGCAGAGA-GGACTCA 498
||||| || || || || || ||||||||||| |||||||||||||| || | |||||||
Sbjct 416 TGGGCCTTTGCTATAGCCGCGGCTGGAATCACGAGTGGTTCGATCGCTGA-ACGGACTCA 474
Query 499 GTTCGTGGCTTACTTGATATACTCTTCTTTCTTAACCGGATTTGTTTACCCGGTTGTCTC 558
||||||||||||| | || || || |||||||||||||| |||||||||||||| || ||
Sbjct 475 GTTCGTGGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACCCGGTCGTGTC 534
Query 559 TCACTGGTTTTGGTCCCCGGATGGATGGGCCAGTCCCTTTCGTTCAGC-GGATGATC-GT 616
||||||||| ||||| ||||||||||||||||| || || | | ||| ||| |
Sbjct 535 TCACTGGTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACCGATGGA-GATTTGC 593
Query 617 TTGTTTAGCACCGGAGCCATTGACTTT-GCTGGCTCCGGTGTTGTTCACATGGTTGGTGG 675
|| || || |||||||| || || ||| |||||||||||||||||||| ||||| || ||
Sbjct 594 TT-TTCAGAACCGGAGCGATCGA-TTTCGCTGGCTCCGGTGTTGTTCATATGGTCGGAGG 651
Query 676 CATAGCAGGTTTATGGGGTGCTCTT-ATTGAAGGTCCTCGTCGT-GGTCGGTTCGAGAAA 733
|| || || | ||||| || || |||||||| || || | | || |||||||| ||
Sbjct 652 TATCGCTGGACTCTGGGGAGCG-TTCATTGAAGGACCACGAC-TCGGCCGGTTCGATAAC 709
Query 734 GGTGGTCGCGCTATTGCTCTGCGCGGCCACTCTGCCTCGCTAGTAGTC-TTAGGAACCTT 792
||||| || || || ||||| || |||||||| || || || || ||| || ||||| ||
Sbjct 710 GGTGGCCGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTT-GGAACATT 768
Query 793 CCTCCTATGGTTTGGATGGTATGGTTTCAACCCCGGTTCCTTCA-CTAAGATACTCGTTC 851
|||||| |||||||||||||| || |||||||||||||| |||| | || || || || |
Sbjct 769 CCTCCTTTGGTTTGGATGGTACGGATTCAACCCCGGTTCTTTCAACAAA-ATCCTAGT-C 826
Query 852 -CGTAT-AATTCTGGTTCCAA-CTACGGCCAATGGAGCG-GAATCGGCCGTACAGCGGTT 907
| || || | || | | | | ||||| ||||||| | |||| || || || ||
Sbjct 827 ACATACCAAA-CAGGAACGTATCAA-GGCCAGTGGAGCGCGG-TCGGACGGACGGCCGTC 883
Query 908 AACACCACACTCTCAG--GA-TGCACAGCAGCTCTAACCACACTCTTTGGTAAACGTCTC 964
| || || || || || | ||||| || || || || ||||||||||| || ||||||
Sbjct 884 A-CAACA-AC-CTTAGCCGGCTGCACCGCCGCGCTCACAACACTCTTTGGGAAGCGTCTC 940
Query 965 CTATCAGGCCACTGGAACGTAACGGACGTTTGCAACGGGTTACTCGGTGGGTTTGCGGCC 1024
|| || || || |||||||| || || || |||||||| | ||||| |||||||| |||
Sbjct 941 CTCTCGGGACATTGGAACGTCACTGATGTATGCAACGGCCTCCTCGGAGGGTTTGCAGCC 1000
Query 1025 ATAACCGCAGGTTGCTCCGTCGTAGAGCCATGGGCAGCGATTGTGTGCGGCTTCATGGCT 1084
||||| | || ||||| ||||| ||||||||||| || || | ||||| ||| ||||
Sbjct 1001 ATAACTGGTGGCTGCTCAGTCGTTGAGCCATGGGCGGCCATCATCTGCGGGTTCGTGGCG 1060
Query 1085 TCTGTCGTCCTTATCGGATGCAACAAGCTCGCGGAG---CTTGTACAATATGATGATCCA 1141
| | ||||| ||||||||||||||||||||||| ||| | |||| || || ||
Sbjct 1061 GCCCTTGTCCTCCTCGGATGCAACAAGCTCGCGGAGAAGCTT--A-AATACGACGACCCG 1117
Query 1142 CTCGAGGCAGCCCAACTACATGGAGGGTGTGGCGCGTGGGGGTTGATATTCGTAGGATTG 1201
|| |||||||| || ||||| || || || ||||||||||| | |||||| || |
Sbjct 1118 CTTGAGGCAGCACAGCTACACGGTGGTTGCGGCGCGTGGGGACTAATATTCACAGCCCT- 1176
Query 1202 TTT-GC-CAAAGAGAAGTATCTA-AACGAGGTTTATGGCGCCAC-CCCGGGAAGGCCATA 1257
||| || ||| || ||||| || ||| || |||| ||| || ||||| ||||||| |
Sbjct 1177 TTTCGCTCAA-GAAAAGTA-CTTGAACCAGATTTACGGCAACAGACCCGG-AAGGCCACA 1233
Query 1258 TGGACTATTTATGGGCGGAGGAGGGAAGCTG-TTGGGAGCACAATTGGTTCAAAT-ACTT 1315
|| | ||||||||||| ||||| || || |||| ||| || || |||| || | ||
Sbjct 1234 CGGTTTGTTTATGGGCGGTGGAGGAAAACTACTTGG-AGCTCAGCTGATTCAGATCA-TT 1291
Query 1316 GTGATTGTAGGATGGGTTAGTGCCACAATGGGAACACTCTTCTTCATCCTCAA-AAGGCT 1374
||||| || ||||| ||||| || ||||| ||||| |||||||| ||||| || |
Sbjct 1292 GTGATCACGGGTTGGGTAAGTGCGACCATGGGGACACTTTTCTTCATACTCAAGAAAA-T 1350
Query 1375 CAA-TCTGCTTA-GGATCTCGG-AGCAGCATGAAATG-CAAGGGATGGATATGACACGTC 1430
|| | || || |||| |||| || || |||| ||| | || ||||||||||| || |
Sbjct 1351 GAAAT-TG-TTGCGGATATCGGCAG-AGGATGAGATGGCC-GGTATGGATATGACCCGGC 1406
Query 1431 ACGGTGGCTTTGCTTATATCTACCATGATAATGATGATGAGTCTCA 1476
||||||| ||||||||||| ||| |||| ||||||||||||||
Sbjct 1407 ACGGTGGTTTTGCTTATATGTACTTTGAT---GATGATGAGTCTCA 1449
> Ahg493556 jgi|Araly1|493556|fgenesh2_kg.7__2989__AT4G13510.1
Length=1707
Score = 782 bits (423), Expect = 0.0
Identities = 1102/1422 (77%), Gaps = 77/1422 (5%)
Strand=Plus/Plus
Query 92 GCCACGGCGGCGGCCGACTACATTTGCGGCCAATTAGGCACCGTTAACAACAAGTTCACC 151
||||||| ||| ||| ||||||| || ||||| || || ||| ||| |||||||| |
Sbjct 83 GCCACGGAGGCTGCCAACTACATCTGTGGCCAGCTAAGCGTCGTCGACAGCAAGTTCATC 142
Query 152 GATGCAGCCTTCGCCATAGACAACACCTACCTCCTCTTCTCTGCCTACCTTGTCTTCGCC 211
|| || || ||||||||||||| ||| |||||||||||||| || |||||||||||| |
Sbjct 143 GACGCCGCTTTCGCCATAGACACCACTTACCTCCTCTTCTCCGCTTACCTTGTCTTCTCT 202
Query 212 ATGCAGCTCGGCTTCGCTATGCTTTGTGCTGGTTCTGTTAGAGCCAAGAATACGATGAAC 271
|||||||| |||||||||||||| ||||| ||||| || ||||| |||||||||||||||
Sbjct 203 ATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCGTAAGAGCTAAGAATACGATGAAC 262
Query 272 ATCATGCTTACCAATGTCCTTGACGCTGCAGCCGGAGGACTCTTCTACTATCTCTTTGGT 331
|||||||||||||| || ||||| ||||| |||||||| ||||| |||||||| |||||
Sbjct 263 ATCATGCTTACCAACGTTCTTGATGCTGCGGCCGGAGGTCTCTTTTACTATCTATTTGGC 322
Query 332 TACGCCTTTGCCTTTGGAGGATCC-TCCGAAGGGTT-CATTGG-AAGACACAACTTTGCT 388
|| || |||||||||||| ||| ||| || |||| |||||| || |||| |||||| |
Sbjct 323 TATGCTTTTGCCTTTGGATC-TCCGTCC-AATGGTTTCATTGGTAA-ACACTACTTTGGT 379
Query 389 CTTAGAGACTTTCCG-ACTCCCACAGCTGATTACTCT--TTCTTCCTCTACCAATGGGCG 445
|| | ||| | ||| || |||| |||||||| || || ||| |||||||||||||
Sbjct 380 CTCAAAGA-TATCCCCACGGCCACTGCTGATTATTCCAATT-TTC-TCTACCAATGGGCC 436
Query 446 TTCGCAATCGCGGCCGCTGGAATCACAAGTGGTTCGATCGCAGAGA-GGACTCAGTTCGT 504
|| || || || || ||||||||||| |||||||||||||| || | |||||||||||||
Sbjct 437 TTTGCTATAGCCGCGGCTGGAATCACTAGTGGTTCGATCGCTGA-ACGGACTCAGTTCGT 495
Query 505 GGCTTACTTGATATACTCTTCTTTCTTAACCGGATTTGTTTACCCGGTTGTCTCTCACTG 564
||||||| | || || || |||||||||||||| |||||||||||||| || ||||||||
Sbjct 496 GGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACCCGGTCGTGTCTCACTG 555
Query 565 GTTTTGGTCCCCGGATGGATGGGCCAGTCCCTTTCGTTCAGC-GGATGATC-GTTTGTTT 622
||| ||||| ||||||||||||||||| || || | | ||| ||| | || ||
Sbjct 556 GTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACCGATGGA-GATTTGCTT-TTC 613
Query 623 AGCACCGGAGCCATTGACTTT-GCTGGCTCCGGTGTTGTTCACATGGTTGGTGGCATAGC 681
|| |||||||| || || ||| |||||||||||||||||||| ||||| || || || ||
Sbjct 614 AGAACCGGAGCGATCGA-TTTCGCTGGCTCCGGTGTTGTTCATATGGTCGGAGGTATCGC 672
Query 682 AGGTTTATGGGGTGCTCTT-ATTGAAGGTCCTCGTCGT-GGTCGGTTCGAGAAAGGTGGT 739
|| | ||||| || || |||||||| || || | | || |||||||| || |||||
Sbjct 673 TGGACTCTGGGGAGCG-TTCATTGAAGGACCACGAC-TCGGCCGGTTCGATAACGGTGGC 730
Query 740 CGCGCTATTGCTCTGCGCGGCCACTCTGCCTCGCTAGTAGTC-TTAGGAACCTTCCTCCT 798
|| || || ||||| || |||||||| || || || || ||| || ||||| ||||||||
Sbjct 731 CGTGCCATCGCTCTTCGTGGCCACTCGGCGTCACTTGTTGTCCTT-GGAACATTCCTCCT 789
Query 799 ATGGTTTGGATGGTATGGTTTCAACCCCGGTTCCTTCA-CTAAGATACTCGTTC-CGTAT 856
|||||||||||||| || |||||||||||||| |||| | || || || || | | ||
Sbjct 790 TTGGTTTGGATGGTACGGATTCAACCCCGGTTCTTTCAACAAA-ATCCTAGT-CACATAC 847
Query 857 -AATTCTGGTTCCAA-CTACGGCCAATGGAGCG-GAATCGGCCGTACAGCGGTTAAC-AC 912
|| | || | | | | ||||| ||||||| | |||| || || || || | | ||
Sbjct 848 CAAA-CAGGAACGTATCAA-GGCCAGTGGAGCGCGG-TCGGACGGACGGCCGTCA-CTAC 903
Query 913 CACACTCT--CAGGATGCACAGCAGCTCTAACCACACTCTTTGGTAAACGTCTCCTATCA 970
||| || | | || ||||| || || || || || ||||| || |||||||| || ||
Sbjct 904 CAC-CT-TAGCCGGCTGCACCGCGGCGCTCACGACTCTCTTCGGAAAACGTCTTCTCTCT 961
Query 971 GGCCACTGGAACGTAACGGACGTTTGCAACGGGT-TACTCGGTGGGTTTGCGGCCATAAC 1029
||||| |||||||| || || || || ||||| | | ||||| |||||||| ||||| ||
Sbjct 962 GGCCATTGGAACGTCACCGATGTATGTAACGG-TCTCCTCGGAGGGTTTGCAGCCATTAC 1020
Query 1030 CGCAGGTTGCTCCGTCGTAGAGCCATGGGCAGCGATTGTGTGCGGCTTCATGGCTTCTGT 1089
|| || ||||| ||||||||||||||||| || || | ||||| ||| |||| | |
Sbjct 1021 CGGGGGCTGCTCAGTCGTAGAGCCATGGGCGGCAATCATCTGCGGGTTCGTGGCGGCCCT 1080
Query 1090 CGTCCTTATCGGATGCAACAAGCTCGCGGAG---CTTGTACAATATGATGATCCACTCGA 1146
||||| |||| |||||||||||||||||| ||| | |||| || || ||||| ||
Sbjct 1081 AGTCCTCCTCGGTTGCAACAAGCTCGCGGAGAAGCTT--A-AATACGACGACCCACTTGA 1137
Query 1147 GGCAGCCCAACTACATGGAGGGTGTGGCGCGTGGGGGTTGATATTCGTAGGATTGTTT-G 1205
|||||| |||||||| || || || ||||||||||| | |||||| || | ||| |
Sbjct 1138 GGCAGCACAACTACACGGCGGTTGCGGCGCGTGGGGACTAATATTCACAGCCCT-TTTCG 1196
Query 1206 C-CAAAGAGAAGTATCTA-AACGAGGTTTATGGCGCCAC-CCCGGGAAGGCCATATGGAC 1262
| ||| || ||||| || ||| || |||| ||| || ||||| ||||||| | ||
Sbjct 1197 CTCAA-GAAAAGTA-CTTGAACCAGATTTACGGCAACAGACCCGG-AAGGCCACACGGTT 1253
Query 1263 TATTTATGGGCGGAGGAGGGAAGCTG-TTGGGAGCACAATTGGTTCAAAT-ACTTGTGAT 1320
| ||||||||||| ||||| || || |||| ||| || || |||| || | |||||||
Sbjct 1254 TGTTTATGGGCGGTGGAGGAAAACTACTTGG-AGCTCAGCTGATTCAGATCA-TTGTGAT 1311
Query 1321 TGTAGGATGGGTTAGTGCCACAATGGGAACACTCTTCTTCATCCTCAA-AAGGCTCAA-T 1378
|| ||||| ||||| || ||||| ||||| |||||||||||||| || | || |
Sbjct 1312 CACGGGTTGGGTAAGTGCGACCATGGGGACACTTTTCTTCATCCTCAAGAAAA-TGAAAT 1370
Query 1379 CTGCTTAG-GA-TCTCGG-AGCAGCATGAAATG-CAAGGGATGGATATGACACGTCACGG 1434
|| || | || | |||| || || |||| ||| | || ||||||||||| || |||||
Sbjct 1371 -TG-TT-GCGAATATCGGCAG-AGGATGAGATGGCC-GGTATGGATATGACCCGGCACGG 1425
Query 1435 TGGCTTTGCTTATATCTACCATGATAATGATGATGAGTCTCA 1476
||| ||||||||||| ||| |||| ||||||||||||||
Sbjct 1426 TGGTTTTGCTTATATGTACTTTGAT---GATGATGAGTCTCA 1464
> Ahg358961 jgi|Araly1|358961|fgenesh1_pg.C_scaffold_9000001
Length=677
Score = 486 bits (263), Expect = 2e-136
Identities = 510/628 (81%), Gaps = 22/628 (4%)
Strand=Plus/Plus
Query 92 GCCACGGCGGCGGCCGACTACATTTGCGGCCAATTAGGCACCGTTAACAACAAGTTCACC 151
||||||| ||| ||| ||||||| || ||||| || || ||| |||||||| |||| |
Sbjct 46 GCCACGGAGGCTGCCAACTACATCTGTGGCCAGCTAAGCGTCGTCAACAACAAATTCATC 105
Query 152 GATGCAGCCTTCGCCATAGACAACACCTACCTCCTCTTCTCTGCCTACCTTGTCTTCGCC 211
|| | || |||||||| |||||||| |||||||||||||| || |||||||||||| |
Sbjct 106 GACACCGCTTTCGCCATCGACAACACATACCTCCTCTTCTCCGCTTACCTTGTCTTCTCT 165
Query 212 ATGCAGCTCGGCTTCGCTATGCTTTGTGCTGGTTCTGTTAGAGCCAAGAATACGATGAAC 271
|||||||| |||||||||||||| ||||| ||||| || |||||||||||||||||||||
Sbjct 166 ATGCAGCTTGGCTTCGCTATGCTCTGTGCCGGTTCCGTAAGAGCCAAGAATACGATGAAC 225
Query 272 ATCATGCTTACCAATGTCCTTGACGCTGCAGCCGGAGGACTCTTCTACTATCTCTTTGGT 331
|||||||||||||| || ||||| ||||| |||||||| ||||| |||||||| |||||
Sbjct 226 ATCATGCTTACCAACGTTCTTGATGCTGCGGCCGGAGGTCTCTTTTACTATCTATTTGGC 285
Query 332 TACGCCTTTGCCTTTGGAGGATCC-TCCGAAGGGTT-CATTGG-AAGACACAACTTTGCT 388
|| || |||||||||||| ||| ||| || |||| |||||| || |||| |||||| |
Sbjct 286 TATGCTTTTGCCTTTGGATC-TCCGTCC-AATGGTTTCATTGGTAA-ACACTACTTTGGT 342
Query 389 CTTAGAGACTTTCCG-ACTCCCACAGCTGATTACTCT--TTCTTCCTCTACCAATGGGCG 445
|| | ||| | ||| || |||| |||||||| || || ||| |||||||||||||
Sbjct 343 CTCAAAGA-TATCCCCACGGCCACTGCTGATTATTCCAATT-TTC-TCTACCAATGGGCC 399
Query 446 TTCGCAATCGCGGCCGCTGGAATCACAAGTGGTTCGATCGCAGAGA-GGACTCAGTTCGT 504
|| || || || || ||||||||||| |||||||||||||| || | |||||||||||||
Sbjct 400 TTTGCTATAGCCGCGGCTGGAATCACTAGTGGTTCGATCGCTGA-ACGGACTCAGTTCGT 458
Query 505 GGCTTACTTGATATACTCTTCTTTCTTAACCGGATTTGTTTACCCGGTTGTCTCTCACTG 564
||||||| | || || || |||||||||||||| |||||||||||||| || ||||||||
Sbjct 459 GGCTTACCTAATCTATTCCTCTTTCTTAACCGGGTTTGTTTACCCGGTCGTGTCTCACTG 518
Query 565 GTTTTGGTCCCCGGATGGATGGGCCAGTCCCTTTCGTTCAGC-GGATGATC-GTTTGTTT 622
||| ||||| ||||||||||||||||| || || | | ||| ||| | || ||
Sbjct 519 GTTCTGGTCGGTTGATGGATGGGCCAGTCCGTTCCGGACCGATGGA-GATTTGCTT-TTC 576
Query 623 AGCACCGGAGCCATTGACTTT-GCTGGCTCCGGTGTTGTTCACATGGTTGGTGGCATAGC 681
|| |||||||| || || ||| |||||||||||||||||||| ||||| || || || ||
Sbjct 577 AGAACCGGAGCGATCGA-TTTCGCTGGCTCCGGTGTTGTTCATATGGTCGGAGGTATCGC 635
Query 682 AGGTTTATGGGGTGCTCTT-ATTGAAGG 708
|| | ||||| || || ||||||||
Sbjct 636 TGGACTCTGGGGAGCG-TTCATTGAAGG 662
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65972304340
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5