BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G24480.1
Length=1485
Score E
Sequences producing significant alignments: (Bits) Value
Ahg905564 jgi|Araly1|905564|Al_scaffold_0003_2692 2350 0.0
Ahg497051 jgi|Araly1|497051|fgenesh2_kg.9__16__AT4G13340.1 1184 0.0
Ahg492992 jgi|Araly1|492992|fgenesh2_kg.7__2425__AT4G18670.1 905 0.0
> Ahg905564 jgi|Araly1|905564|Al_scaffold_0003_2692
Length=1479
Score = 2350 bits (1272), Expect = 0.0
Identities = 1417/1487 (95%), Gaps = 10/1487 (1%)
Strand=Plus/Plus
Query 1 ATGAAGAACAACACCACTCAAtctctccttctccttctcctcttcttcttcttcttcttt 60
||||||||||||||||||||||||||||| |||||||||||||||||||||| | || |
Sbjct 1 ATGAAGAACAACACCACTCAATCTCTCCTCCTCCTTCTCCTCTTCTTCTTCTCCGTCACT 60
Query 61 gaaatctctcattctctctcaatctcatccaatgctcctctctcCGACACCGAAGTCAGA 120
||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||
Sbjct 61 GAAATCTCTCATTCTCTTTCGATCTCATCCAATGCTCGTCTCTCCGACACCGAAGTCAGA 120
Query 121 TTCATCCAACGCCGTCAACTTCTCTACTACCGCGACGAGTTCGGTGACCGTGGTGAGAAT 180
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 121 TTCATCCAACGCCGTCAACTTCTCTACTACCGCGACGAGTTCGGTGACCGCGGTGAGAAA 180
Query 181 GTCACAGTAGATCCATCACTAATCTTCGAGAATCCGCGGCTTCGTAGTGCTTACATAGCT 240
|| || ||||||||||| ||||||||||||||||| || || || |||||||||||||||
Sbjct 181 GTAACCGTAGATCCATCTCTAATCTTCGAGAATCCACGACTACGAAGTGCTTACATAGCT 240
Query 241 CTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCTAATAATATCACTGTTAATTGGATC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCTAATAATATCACTGTTAATTGGATC 300
Query 301 GGATCCAATGTCTGTAACTACACCGGAGTTTTCTGTTCTAA-AGCTCTTGATAACCGGAA 359
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 301 GGATCCAATGTCTGTAACTACACCGGAGTTTTCTGTTC-ACGAGCTCTTGATAACCGGAA 359
Query 360 GATCCGTACCGTCGCCGGAATCGATCTCAACCACGCCGATATCGCTGGGTATTTACCTGA 419
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 360 GATCCGTACCGTCGCCGGAATCGATCTCAATCACGCCGATATCGCTGGGTATTTACCTGA 419
Query 420 AGAGCTTGGTTTGTTAACAGATCTAGCTTTGTTTCATGTTAATTCGAATCGATTCTGTGG 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 AGAGCTTGGTTTGTTAACAGATCTAGCTTTGTTTCATGTTAATTCGAATCGATTCTGTGG 479
Query 480 TACTGTTCCTCATAAGTTCAAGCAGCTTAAGCTTTTGTTCGAGCTTGATCTTAGTAACAA 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 AACTGTTCCTCATAAGTTCAAGCAGCTTAAGCTTTTGTTCGAGCTTGATCTTAGTAACAA 539
Query 540 TCGGTTCGCCGGAAAGTTTCCCACGGTGGTTCTTCATTTGCCGTCGTTGAAGTTCTTAGA 599
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 540 TCGATTCGCCGGAAAGTTTCCAACGGTGGTTCTTCATTTGCCGTCGTTGAAGTTCTTAGA 599
Query 600 TCTCCGGTTTAATGAGTTTGAAGGAACCGTACCGAAAGAGCTTTTTAGTAAAAATCTAGA 659
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 600 TCTCCGGTTTAATGAGTTTGAAGGAACTGTACCGAAAGAGCTTTTTAGTAAAAATCTAGA 659
Query 660 TGCGATTTTTATAAACCATAACCGGTTCCGGTTTGAGTTACCGGAAAATTTCGGTGATTC 719
||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 660 TGCGATTTTCATTAACCATAACCGGTTCCGGTTTGAGTTACCGGATAATTTCGGTGATTC 719
Query 720 TCCGGTTTCGGTTATTGTTCTTGCGAATAATCATTTCCATGGTTGTATTCCGACGAGTTT 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TCCGGTTTCGGTTATTGTTCTTGCGAATAATCATTTCCATGGTTGTATTCCGACGAGTTT 779
Query 780 GGTGGAGATGAAGAATCTTAATGAGATTATTTTCATGAACAATGGTTTGAATTCTTGTTT 839
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 780 GGTGGAGATGAAGAATCTTAATGAGATTATTTTCATGAATAATGGTTTGAATTCTTGTTT 839
Query 840 ACCGGCGGATATCGGAAGGTTGAAGAATGTGACGGTGTTTGATGTTAGTTTTAATGAGCT 899
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 840 ACCGGCGGATATCGGAAGGTTGAAGAACGTGACGGTGTTTGATGTTAGTTTTAATGAGCT 899
Query 900 TGTTGGTCCGTTGCCGGAGAGTGTTGGTGGTATGGTGGAGGTTGAGCAGTTGAATGTTGC 959
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 900 TGTTGGTCCGTTGCCGAAGAGTGTTGGTGGTATGGTGGCGGTTGAGCAGTTGAATGTGGC 959
Query 960 TCATAATTTGTTATCTGGGAAGATTCCGGCGAGTATTTGTCAGCTTCCTAAGCTTGAGAA 1019
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 960 TCATAATCTGTTATCTGGGAAGATTCCGGCGAGTATTTGTCAGCTTCCGAAGCTTGAGAA 1019
Query 1020 TTTCACTTATAGTTATAATTTCTTTACTGGTGAAGCTCCTGTGTGTTTGAGGTTGTCTGA 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1020 TTTCACTTATAGTTATAATTTCTTTACTGGTGAAGCTCCTGTGTGTTTGAGGTTGCCTGA 1079
Query 1080 GTTTGATGATCGGAGAAATTGTTTGCCCGGAAGACCTGCTCAGAGATCTTCACGGCAATG 1139
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1080 GTTTGATGATCGGAGAAATTGTTTGCCTGGAAGACCTGCTCAGAGATCTTCACGTCAATG 1139
Query 1140 TTCAGCTTTCTTGTCACGGCCTTCGGTGGATTGTGGATCTTTTGGTTGTGGTCGTTCTGT 1199
||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1140 TTCAGCTTTCTTGTCACGGCCGCCAGTGGATTGTGGATCTTTTGGTTGTGGTCGTTCTGT 1199
Query 1200 TGTTAAACCGTCTCCACCTATTGTAGCATTACCGCCGCCTCCTCCGCCATCGCCTCCGTT 1259
| ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1200 T---AAACCGTCTCCTCCTATTGTAGCATTACCGCCGCCGCCTCCGCCATCGCCGCCGTT 1256
Query 1260 ACCTCC-ACCTGTTTACTCTCCTCCGCCGTCACCTCCTGTCTTCTCTCCTCCACCGTCAC 1318
|||||| || ||| |||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 1257 ACCTCCTAC-TGTCTACTCTCCTCCGCCGTCACCTCCTGTCTACTCTCCTCCGCCGTCAC 1315
Query 1319 CCCCTGTATACTCTCCTCCACCGCCACCATCAATCCATTACAGTTCTCCTCCTCCACCGC 1378
| ||||||||||||||||||||||| || | || | | | | | || || |||||||
Sbjct 1316 CTCCTGTATACTCTCCTCCACCGCCGCCCCCTGTCTACT-C--TCCGCCACCGCCACCGC 1372
Query 1379 CAGTCCATCACAGTTCTCCTCCACCACCATCACCTGAATTTGAAGGGCCATTACCGCCGG 1438
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1373 CAGTCCATCACAGTTCTCCTCCACCTCCATCACCTGAATTTGAAGGGCCATTACCGCCGG 1432
Query 1439 TGATCGGAGTATCCTATGCATCTCCCCCACCACCACCCTTCTATTGA 1485
| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1433 TTATCGGAGTATCCTATGCATCTCCTCCACCACCACCCTTCTATTGA 1479
> Ahg497051 jgi|Araly1|497051|fgenesh2_kg.9__16__AT4G13340.1
Length=1812
Score = 1184 bits (641), Expect = 0.0
Identities = 903/1029 (88%), Gaps = 20/1029 (2%)
Strand=Plus/Plus
Query 182 TCACAGTAGATCCATCACTAATCTTCGAGAATCCGCGGCTT-CGTAGTGCTTACATAGCT 240
|||| || ||||| || |||||||||||||||||| | || || | |||||| ||||||
Sbjct 149 TCACCGTTGATCCTTCTCTAATCTTCGAGAATCCG-AGATTACGAAATGCTTATATAGCT 207
Query 241 CTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCTAATAATATCACTGT-TAATTGGAT 299
|| ||||||||||||||||| |||||||||||||| || ||| ||||| | ||||||||
Sbjct 208 CTACAAGCTTGGAAACAAGCGATTCTCTCTGATCCAAACAATTTCACT-TCGAATTGGAT 266
Query 300 CGGATCCAATGTCTGTAACTACACCGGAGTTTTCTGTTCTAAAGCTCTTGATAACCGGAA 359
|||||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct 267 CGGATCCAATGTCTGTAACTACACCGGAGTTTTCTGTTCTCCGGCCCTTGATAATCGGAA 326
Query 360 GATCCGTACCGTCGCCGGAATCGATCTCAACCACGCCGATATCGCTGGGTATTTACCTGA 419
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 327 GATCCGTACCGTCGCCGGAATCGATCTCAACCACGCCGATATCGCTGGTTATTTACCTGA 386
Query 420 AGAGCTTGGTTTGTTAACAGATCTAGCTTTGTTTCATGTTAATTCGAATCGATTCTGTGG 479
|||||||||||||||| ||||||| |||||||||||||||||||| || || || |||||
Sbjct 387 AGAGCTTGGTTTGTTATCAGATCTCGCTTTGTTTCATGTTAATTCAAACCGGTTTTGTGG 446
Query 480 TACTGTTCCTCATAAGTTCAAGCAGCTTAAGCTTTTGTTCGAGCTTGATCTTAGTAACAA 539
|||||| || || ||| || | ||| |||||||| |||||||||||||||||||||||
Sbjct 447 TACTGTACCACACCGGTTTAACCGGCTAAAGCTTTTATTCGAGCTTGATCTTAGTAACAA 506
Query 540 TCGGTTCGCCGG-AAAGTTTCCCACGGTGGTTCTT-CATTTGCCGTCGTTGAAGTTCTTA 597
|||||||| || ||| ||||| ||||| || ||| || || || ||||||||||| |||
Sbjct 507 CCGGTTCGCTGGGAAA-TTTCCGACGGTTGT-CTTGCAATTACCATCGTTGAAGTTTTTA 564
Query 598 GATCTCCGGTTTAATGAGTTTGAAGGAACCGTACCGAAAGAGCTTTTTAGTAAAAATCTA 657
||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||
Sbjct 565 GATCTCCGGTTTAATGAATTTGAAGGAACTGTACCGAAAGAGCTTTTTAGTAAAGATCTT 624
Query 658 GATGCGATTTTTATAAACCATAACCGGTTCCGGTTTGAGTTACCGGAAAATTTCGGTGAT 717
|| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 625 GACGCGATTTTTATAAACCATAACCGGTTCCGGTTTGAGTTACCGGAGAATTTTGGTGAT 684
Query 718 TCTCCGGTTTCGGTTATTGTTCTTG-CGAATAATCATTTCCATGGTTGTATTCCGACGAG 776
|| |||||||||||||||||| ||| ||||||| | |||||||||||| | || ||||
Sbjct 685 TCGCCGGTTTCGGTTATTGTT-TTGGCGAATAACCGGTTCCATGGTTGTGTACCTTCGAG 743
Query 777 TTTGGTGGAGATGAAGAATCTTAATGAGATTATTTTCATGAACAATGGT-TTGAATTCTT 835
|||||||||||||||||||||||| ||||| || ||||||||||||||| || |||||||
Sbjct 744 TTTGGTGGAGATGAAGAATCTTAACGAGATCATCTTCATGAACAATGGTCTT-AATTCTT 802
Query 836 GTTTACCGGCGGATATCGGAAGGTTGAAGAATGTGACGGTGTTTGATGTTAGTTTTAATG 895
|||||||| | ||||||||| |||| ||||| |||||||||||||| || |||||||| |
Sbjct 803 GTTTACCGTCTGATATCGGACGGTTAAAGAACGTGACGGTGTTTGACGTCAGTTTTAACG 862
Query 896 AGCTTGTTGGTCCGTTGCCGGAGAGTGTTGGTG-GTATGGTGGAGGTTGAGCAG-TTGAA 953
| |||||||| ||||| |||||||||||||||| | ||||| ||| |||||| || ||
Sbjct 863 AACTTGTTGGGCCGTTACCGGAGAGTGTTGGTGAG-ATGGTTTCGGTGGAGCAGCTT-AA 920
Query 954 TGTTGCTCATAATTTGTTATCTGGGAAGATTCCGGCGAGTATTTGTCAGCTT-CCTAAGC 1012
||| || |||||| ||| || ||||||||||||||||||||||||||| || || ||||
Sbjct 921 TGTGGCGCATAATAAGTTGTCGGGGAAGATTCCGGCGAGTATTTGTCAG-TTACCGAAGC 979
Query 1013 TTGAGAATTTCACTTATAGTTATAATTTCTTTACTGGTGAAGCTCCTGTGTGTTTGAGGT 1072
||||||| |||||||||||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct 980 TTGAGAACTTCACTTATAGTTACAATTTCTTTACTGGAGAAGCGCCTGTGTGTTTGAGGT 1039
Query 1073 TGTCTGAGTTTGATGATCGGAGAAATTGTTTGCCCGGAAGACCTGCTCAGAGATCTTCAC 1132
|| | ||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1040 TGCCGGAGTTTGATGATCGGAGAAATTGTTTGCCGGGAAGACCTGCTCAGAGATCGCCT- 1098
Query 1133 GG-CAATGTTCAGCTTTCTTGTCACGGCCTTCGGTGGATTGTGGATCTTTTGGTTGTGGT 1191
|| |||||| |||||| ||||| || || ||||| |||||||||| ||| |||| |||
Sbjct 1099 GGTCAATGTAAAGCTTTTTTGTCTCGTCCGCCGGTGAATTGTGGATCGTTTAGTTGCGGT 1158
Query 1192 CGTTCTGTT 1200
|||||||||
Sbjct 1159 CGTTCTGTT 1167
> Ahg492992 jgi|Araly1|492992|fgenesh2_kg.7__2425__AT4G18670.1
Length=2467
Score = 905 bits (490), Expect = 0.0
Identities = 920/1123 (82%), Gaps = 48/1123 (4%)
Strand=Plus/Plus
Query 99 tctctcCGACACCGAAGTCAGATTCATCCA-ACGCCGTCAACTTCTCTACTACCGCGACG 157
|||||| |||| ||||||| | | || || || ||||| |||||||||| ||| ||||
Sbjct 114 TCTCTCAGACAACGAAGTCCGGCTAAT-CACACAACGTCAGCTTCTCTACTTCCGTGACG 172
Query 158 AGTTCGGTGACCGTGGTGAGAATGTC-ACAGTAGATCCATCACTAATCTTCGAGAATCCG 216
||||||| ||||| || ||||||||| | || |||||||||||| |||||||||||||
Sbjct 173 AGTTCGGCGACCGCGGCGAGAATGTCGTC-GTTGATCCATCACTAGTCTTCGAGAATCCA 231
Query 217 CGGCTTCGTAGTGCTTACATAGCTCTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCT 276
|| || || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 CGACTACGAAGTGCTTACATAGCTCTTCAAGCTTGGAAACAAGCTATTCTCTCTGATCCA 291
Query 277 AATAA-TATCACTGTTAATTGGATCGGATCCAATGTCTGTAACTACACCGGAGTTTTCTG 335
|| || | |||| || |||||||| || |||| || | ||||||||||||| |||
Sbjct 292 AACAACT-TCACAACAAACTGGATCGGTTCTGATGTTTGCAGTTACACCGGAGTTTACTG 350
Query 336 TTCTAAAGCTCTT-GATAACCGGAAGATCCGTACCGTCGCCGGAATCGATCTCAACCACG 394
| || || || ||||| || ||||||||||||||||||||| |||||||| ||||
Sbjct 351 TGCTCCGGCG-TTAGATAATCGCCGGATCCGTACCGTCGCCGGAATAGATCTCAATCACG 409
Query 395 CCGATATCGCTGGGTATTTACCTGAAGAGCTTGGTTTGTTAACAGATCTAGCTTTGTTTC 454
| ||||| ||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||
Sbjct 410 CTGATATTGCTGGTTATTTGCCTCAAGAGCTTGGTTTGTTAACAGATCTCGCTTTGTTTC 469
Query 455 ATGTTAATTCGAATCGATTCTGTGGTACTGTTCCTCATAAGTTCAAGCAGCTTAAGCTTT 514
|||||||||| || || || ||||| || || || ||| ||| || | |||||||||||
Sbjct 470 ATGTTAATTCAAACCGGTTTTGTGGAACCGTACCGCATCGGTTTAATCGGCTTAAGCTTT 529
Query 515 TGTTCGAGCTTGATCTTAGTAACAATCGGTTCGCCGGAA-AGTTTCCC-ACGGTGGTTCT 572
| |||||||||||||| ||||| || ||||||||||||| | || ||| || || || ||
Sbjct 530 TATTCGAGCTTGATCTCAGTAATAACCGGTTCGCCGGAATA-TT-CCCTACCGTTGTACT 587
Query 573 TCATTTGCCGTCGTTGAAGTT-CTTAGATCTCCGGTTTAATGAGTTTGAAGGAACC-GTA 630
|| ||||||||||||||||| || ||||| ||||||| ||||| |||||| || ||
Sbjct 588 CCAGTTGCCGTCGTTGAAGTTTCTG-GATCTAAGGTTTAACGAGTTCGAAGGA-CCTGTG 645
Query 631 CCGAAAGAGCTTTTTAGTAAAAATCTAGATGCGATTTTTATAAACCATAACCGGTTCCGG 690
|| | |||||| || || ||| |||| ||||||||||| || ||||||||||||||||||
Sbjct 646 CCTAGAGAGCTCTTCAGCAAAGATCTTGATGCGATTTTCATTAACCATAACCGGTTCCGG 705
Query 691 TTTGAGTTACCGGAAAATTTCGGTGATTCTCCGGTTTCGGTTATTGTTCTTGCGAATAAT 750
|||||||||||||| ||||| || |||||||||||||| ||||| ||| | |||||||||
Sbjct 706 TTTGAGTTACCGGATAATTTGGGAGATTCTCCGGTTTCCGTTATCGTTGTGGCGAATAAT 765
Query 751 CATTTCCATGGTTGTATTCCGACGAGTTTGG-TGGAGATGAAGAATCTT-AATGAGATTA 808
|||||||| |||||||||||||||||||||| || | |||||||||||| || ||||| |
Sbjct 766 CATTTCCACGGTTGTATTCCGACGAGTTTGGGTG-ATATGAAGAATCTTGAA-GAGATCA 823
Query 809 TTTTCATGAACAATGG-TTTGAATTCTTGTTTACCGGCGGATATCGGAAGGTTGAAGAAT 867
|||| ||||||||||| ||||| ||||||||||||| || | |||||| ||||||| ||
Sbjct 824 TTTTTATGAACAATGGGTTTGA-TTCTTGTTTACCGCCGCAGATCGGACGGTTGAAAAAC 882
Query 868 GTGACGGTGTTTGATGTT-AGTTTTAATGAGCTTGTTGG-TCCGTTGCCGGAGAGTGTTG 925
|| ||||| |||||| || |||||||| || || ||||| || ||| |||| |||| |||
Sbjct 883 GTAACGGTTTTTGAT-TTCAGTTTTAACGAACTGGTTGGGTC-GTTACCGGCGAGTATTG 940
Query 926 GTGGTATGGTGGAGGTTG-AGCAGTTGAATGTTGCTCATAATTTG-TTATCTGGGAAGAT 983
| || ||||| | ||| ||||||| ||||| || |||||| | || ||||| | |||
Sbjct 941 GCGGGATGGTTTCG-TTGGAGCAGTTAAATGTGGCGCATAATA-GATTCTCTGGTAGGAT 998
Query 984 TCCGGCGAGTATTTGTCAGCTT-CCTAAGCTTG-AGAATTTCACTTAT-AGTTATAATTT 1040
||||||||||||||||||| || || | | ||| |||||||||||| | ||||| |||||
Sbjct 999 TCCGGCGAGTATTTGTCAG-TTGCCGAGG-TTGGAGAATTTCACTT-TCAGTTACAATTT 1055
Query 1041 CTTTACTGGTGAAGCT-CCTGTGTGTTTGAGGTT-GTCTGAGTTTGATGATCGGAGAAAT 1098
||| || || || || || |||||| | |||| | ||| ||||||||||| | | |||
Sbjct 1056 CTTCACCGGAGA-GCCACCCGTGTGTCTC-GGTTTGCCTGGGTTTGATGATCAGCGGAAT 1113
Query 1099 TGTTTGCCCG-GAAGACCTGCTCAGAGATCTTCACGG--CAATGTTCAGCTTTCT-TGTC 1154
|||||||| | || ||||||| ||||||||| | ||| |||||| | ||||||| | ||
Sbjct 1114 TGTTTGCCGGCGA-GACCTGCGCAGAGATCT-C-CGGGACAATGTGCGGCTTTCTCT-TC 1169
Query 1155 ACGGCCTTCGGTGGATTGTGGATCTTTTGGTTGTGGTCGTTCT 1197
| || ||||||||||||| || ||||| ||||| ||||||
Sbjct 1170 TCTTCCACCGGTGGATTGTGGTTCATTTGGATGTGGCCGTTCT 1212
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55573667455
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5